View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11293A_low_297 (Length: 210)
Name: NF11293A_low_297
Description: NF11293A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11293A_low_297 |
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Alignment Details
Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 47094327 - 47094433
Alignment:
| Q |
80 |
agtaagaagatgatgaacgtgtttgagtggtttgttttgggtgccattgttgaatagaggcgagatgagtgatgagaatgtttgttgttcatttgaaata |
179 |
Q |
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| T |
47094327 |
agtaagaagatgatgaaagtgtttgagtggtttgttttgggtgccattgttgaatagaggtgagatgagtgatgagaatgttttttgttcatttgaaata |
47094426 |
T |
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| Q |
180 |
gttgtta |
186 |
Q |
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||||||| |
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| T |
47094427 |
gttgtta |
47094433 |
T |
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