View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11294_high_33 (Length: 251)
Name: NF11294_high_33
Description: NF11294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11294_high_33 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 31390455 - 31390672
Alignment:
| Q |
19 |
aaaatgccatcttattttcgatgtacaatgaagctaaagtctccaaatttctatgcacaggccttgaaacactctcacttctgcaagtatgcttgctcag |
118 |
Q |
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| T |
31390455 |
aaaatgccatcttatcttcaatgtacaatgaagctaaagtctccaaatttctatgcacaggccttgaaacactctcacttctgcaagtatgcttgctcag |
31390554 |
T |
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| Q |
119 |
aagaaattcctgagcttcaagacatgggaggtccagttgatggtatgtcataattataccaaactatcactaaaaatattgttaatgtcttatacaaata |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31390555 |
aagaaattcctgagcttcaagacatgggaggtccagttgatggtatgtcataattataccaaactatcactaaaaatattgttaatgtcttatacaaata |
31390654 |
T |
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| Q |
219 |
tattaatttttaggctat |
236 |
Q |
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|||||||||||||||||| |
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| T |
31390655 |
tattaatttttaggctat |
31390672 |
T |
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