View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11294_high_42 (Length: 223)
Name: NF11294_high_42
Description: NF11294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11294_high_42 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 28782611 - 28782422
Alignment:
| Q |
19 |
gaacagaagagcatcaagggataacggagaaaacaaaaatagcatgatgtttgaagaagtttgatgaatctgagtgtaatcatttgttgttcttgtgtga |
118 |
Q |
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| T |
28782611 |
gaacagaagagcatcaagggataatggagaaaacaaaaatagcatgatgtttgaagaagtttgatgaatctgagtgtaatcatttgttgttcttgtgtga |
28782512 |
T |
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| Q |
119 |
agatcactggaagtattttttaaaagttactttcatgtgtatataaatgtgttatttgtgatagtttttctcactttctgtggttaataa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28782511 |
agatcactggaagtattttttaaaagttactttcatgtgtatataaatgtgttatttgtgatagtttttctcactttctgtggttaataa |
28782422 |
T |
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