View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11294_low_30 (Length: 263)
Name: NF11294_low_30
Description: NF11294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11294_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 2925327 - 2925579
Alignment:
| Q |
1 |
taaataatgatattaaatgcgtgcaatacttccaaactgcttttggcttcttatgcatcatcagagtagagagtaacacaacataagcttccaatgcnnn |
100 |
Q |
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| T |
2925327 |
taaataatgatattaaatgcgtgcaatgcttccaaactgcttttggcttcttatgcatcatgagagtagagagtaacataacataagcttccaatgcaaa |
2925426 |
T |
|
| Q |
101 |
nnnnnncaaaaggggattttgtcaatatataagatttgaaatcagagaatcttaggaagcagcatgaatccgaccttacaaaaaaggttatgttaccatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
2925427 |
aaaaaacaaaaggggattttgtcaatatataagatttgaaatcagagaatcttaggaagcagcatgaatccgactttacaaaaaaggttatgttaccatg |
2925526 |
T |
|
| Q |
201 |
ttttaatttaatcctataccatcttcgcatctttgtttatattttaccctatg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2925527 |
ttttaatttaatcctataccatcttcgcatctttgtttatattttaccctatg |
2925579 |
T |
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