View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1129_low_17 (Length: 492)

Name: NF1129_low_17
Description: NF1129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1129_low_17
NF1129_low_17
[»] chr4 (52 HSPs)
chr4 (245-476)||(50745104-50745352)
chr4 (245-476)||(18123751-18123999)
chr4 (29-247)||(22621864-22622082)
chr4 (29-244)||(10802889-10803104)
chr4 (29-244)||(38032323-38032538)
chr4 (29-246)||(7261446-7261663)
chr4 (29-205)||(34095562-34095738)
chr4 (29-248)||(38031164-38031383)
chr4 (29-205)||(22623046-22623222)
chr4 (29-205)||(8815260-8815436)
chr4 (30-246)||(10804099-10804315)
chr4 (29-245)||(17356360-17356576)
chr4 (29-243)||(23757873-23758088)
chr4 (29-205)||(5433310-5433486)
chr4 (29-245)||(18091579-18091795)
chr4 (41-241)||(17357778-17357978)
chr4 (38-205)||(8814174-8814340)
chr4 (34-205)||(48499403-48499573)
chr4 (29-205)||(56234924-56235099)
chr4 (29-205)||(48501227-48501402)
chr4 (70-205)||(35193140-35193275)
chr4 (39-205)||(35191856-35192019)
chr4 (112-205)||(56233763-56233856)
chr4 (29-143)||(35925792-35925906)
chr4 (29-143)||(35927019-35927133)
chr4 (33-205)||(36074701-36074873)
chr4 (156-246)||(48463014-48463104)
chr4 (151-247)||(34122827-34122923)
chr4 (29-101)||(48081283-48081355)
chr4 (133-205)||(48081597-48081669)
chr4 (30-101)||(34122725-34122796)
chr4 (29-95)||(48081470-48081536)
chr4 (30-101)||(48462907-48462978)
chr4 (156-245)||(34121298-34121387)
chr4 (138-247)||(48080267-48080376)
chr4 (148-205)||(48081552-48081609)
chr4 (29-74)||(56233878-56233923)
chr4 (361-476)||(30495887-30496002)
chr4 (132-165)||(34122868-34122901)
chr4 (33-94)||(48462272-48462333)
chr4 (133-165)||(48463051-48463083)
chr4 (133-165)||(56233743-56233775)
chr4 (134-165)||(35191836-35191867)
chr4 (132-163)||(48499385-48499416)
chr4 (30-96)||(34121428-34121494)
chr4 (132-161)||(5433473-5433502)
chr4 (132-165)||(8814154-8814187)
chr4 (132-165)||(48081393-48081426)
chr4 (133-161)||(8815424-8815452)
chr4 (133-165)||(34095726-34095758)
chr4 (133-165)||(34121318-34121350)
chr4 (133-165)||(35193263-35193295)
[»] chr3 (80 HSPs)
chr3 (245-476)||(4359854-4360102)
chr3 (29-248)||(28777590-28777809)
chr3 (29-245)||(31937034-31937250)
chr3 (29-242)||(43393956-43394170)
chr3 (29-205)||(47431090-47431266)
chr3 (34-244)||(31938216-31938425)
chr3 (29-243)||(35759134-35759348)
chr3 (29-246)||(17116200-17116416)
chr3 (29-205)||(46902370-46902546)
chr3 (29-205)||(55209821-55209996)
chr3 (29-244)||(2233208-2233423)
chr3 (29-205)||(28776487-28776663)
chr3 (29-205)||(46903527-46903703)
chr3 (30-205)||(21729092-21729267)
chr3 (29-183)||(17740891-17741045)
chr3 (29-183)||(19042211-19042365)
chr3 (29-178)||(5689785-5689934)
chr3 (29-246)||(52521925-52522141)
chr3 (29-245)||(23073277-23073493)
chr3 (43-247)||(54354308-54354512)
chr3 (29-243)||(37609322-37609536)
chr3 (45-205)||(17742211-17742372)
chr3 (45-205)||(19043531-19043692)
chr3 (29-161)||(37610666-37610798)
chr3 (31-245)||(2232601-2232815)
chr3 (29-246)||(21727908-21728125)
chr3 (40-205)||(53180718-53180883)
chr3 (45-241)||(5691014-5691209)
chr3 (29-205)||(52525263-52525438)
chr3 (29-245)||(11348375-11348590)
chr3 (46-246)||(54353021-54353221)
chr3 (31-244)||(10979080-10979293)
chr3 (29-165)||(35758083-35758219)
chr3 (30-201)||(11346855-11347026)
chr3 (29-163)||(55210811-55210945)
chr3 (113-248)||(23091187-23091322)
chr3 (36-243)||(53765876-53766083)
chr3 (29-205)||(47429666-47429837)
chr3 (33-201)||(47917520-47917687)
chr3 (112-205)||(53764467-53764560)
chr3 (30-205)||(50881020-50881188)
chr3 (112-244)||(53178701-53178833)
chr3 (29-149)||(50879782-50879902)
chr3 (29-156)||(10978093-10978219)
chr3 (114-186)||(33113306-33113379)
chr3 (112-205)||(46986077-46986169)
chr3 (132-205)||(23072099-23072171)
chr3 (132-205)||(43392665-43392738)
chr3 (111-245)||(17117386-17117518)
chr3 (30-201)||(15290394-15290564)
chr3 (29-96)||(33111748-33111815)
chr3 (156-245)||(34014507-34014596)
chr3 (34-98)||(53764896-53764959)
chr3 (29-84)||(23072199-23072254)
chr3 (29-80)||(43392770-43392821)
chr3 (156-245)||(24376458-24376547)
chr3 (156-205)||(27750461-27750510)
chr3 (144-205)||(50879533-50879594)
chr3 (31-80)||(53101686-53101735)
chr3 (132-166)||(50879512-50879546)
chr3 (133-166)||(17742360-17742393)
chr3 (133-166)||(19043680-19043713)
chr3 (132-165)||(34014527-34014560)
chr3 (132-165)||(46902350-46902383)
chr3 (132-165)||(46903690-46903723)
chr3 (133-165)||(43392645-43392677)
chr3 (133-165)||(47429646-47429678)
chr3 (133-165)||(52525426-52525458)
chr3 (40-83)||(27749248-27749291)
chr3 (129-164)||(46986153-46986188)
chr3 (134-165)||(55209801-55209832)
chr3 (30-80)||(34015691-34015741)
chr3 (132-165)||(34015834-34015867)
chr3 (136-165)||(50881179-50881208)
chr3 (132-165)||(53101839-53101872)
chr3 (364-420)||(5171515-5171571)
chr3 (133-161)||(24376495-24376523)
chr3 (134-166)||(33113378-33113410)
chr3 (137-165)||(37610797-37610825)
chr3 (133-165)||(47431254-47431286)
[»] chr7 (66 HSPs)
chr7 (29-248)||(19217623-19217842)
chr7 (29-245)||(43113673-43113889)
chr7 (29-247)||(29186661-29186879)
chr7 (29-248)||(44417453-44417672)
chr7 (29-249)||(29187933-29188153)
chr7 (29-247)||(18788463-18788681)
chr7 (29-250)||(43962472-43962693)
chr7 (29-244)||(9391519-9391734)
chr7 (29-248)||(48792439-48792658)
chr7 (29-190)||(9392718-9392879)
chr7 (29-205)||(44420426-44420601)
chr7 (29-245)||(48793419-48793635)
chr7 (33-244)||(13750543-13750754)
chr7 (34-205)||(27072562-27072733)
chr7 (34-205)||(27205580-27205751)
chr7 (29-241)||(3537429-3537640)
chr7 (29-201)||(18787191-18787363)
chr7 (29-200)||(45399913-45400084)
chr7 (34-205)||(7011672-7011844)
chr7 (34-205)||(7027030-7027202)
chr7 (29-205)||(13597183-13597358)
chr7 (30-201)||(37237132-37237300)
chr7 (35-247)||(32519658-32519870)
chr7 (29-177)||(43961000-43961148)
chr7 (29-165)||(44748466-44748602)
chr7 (46-205)||(44230466-44230625)
chr7 (39-241)||(44746729-44746931)
chr7 (30-165)||(26005430-26005565)
chr7 (40-205)||(32518460-32518616)
chr7 (29-204)||(12630603-12630779)
chr7 (31-244)||(3538478-3538681)
chr7 (29-163)||(43114990-43115124)
chr7 (29-166)||(13599160-13599298)
chr7 (29-165)||(13749082-13749217)
chr7 (116-246)||(37235811-37235941)
chr7 (151-244)||(45688867-45688960)
chr7 (133-205)||(12630542-12630614)
chr7 (151-246)||(42611433-42611528)
chr7 (30-80)||(44231765-44231815)
chr7 (30-75)||(9357700-9357745)
chr7 (156-245)||(26006773-26006862)
chr7 (156-245)||(27071019-27071108)
chr7 (156-245)||(27207205-27207294)
chr7 (365-450)||(43853786-43853871)
chr7 (30-101)||(45688991-45689060)
chr7 (156-243)||(7057359-7057446)
chr7 (34-89)||(37235939-37235994)
chr7 (36-101)||(29409151-29409216)
chr7 (30-78)||(45398689-45398737)
chr7 (34-101)||(42611559-42611626)
chr7 (132-165)||(7057395-7057428)
chr7 (132-165)||(44231908-44231941)
chr7 (40-100)||(36395952-36396012)
chr7 (133-165)||(43960964-43960996)
chr7 (133-165)||(45688886-45688918)
chr7 (154-204)||(19016725-19016775)
chr7 (39-101)||(19218897-19218959)
chr7 (30-100)||(47536757-47536827)
chr7 (136-165)||(7011652-7011681)
chr7 (136-165)||(7027010-7027039)
chr7 (132-165)||(19008950-19008983)
chr7 (132-165)||(26006809-26006842)
chr7 (132-161)||(27071043-27071072)
chr7 (132-161)||(27207241-27207270)
chr7 (132-165)||(32518440-32518473)
chr7 (133-166)||(44420589-44420622)
[»] chr8 (36 HSPs)
chr8 (29-248)||(9244061-9244280)
chr8 (29-244)||(26364741-26364956)
chr8 (29-246)||(20308921-20309138)
chr8 (29-246)||(21095554-21095771)
chr8 (29-205)||(9245334-9245510)
chr8 (29-205)||(41636870-41637046)
chr8 (29-205)||(30640837-30641012)
chr8 (29-205)||(522000-522176)
chr8 (34-242)||(34642667-34642874)
chr8 (29-201)||(30644608-30644779)
chr8 (29-249)||(43584403-43584623)
chr8 (29-201)||(26366097-26366269)
chr8 (43-244)||(41638070-41638270)
chr8 (31-205)||(20309956-20310131)
chr8 (31-205)||(21096589-21096764)
chr8 (39-205)||(34643878-34644038)
chr8 (156-246)||(3714550-3714640)
chr8 (30-201)||(43585849-43586019)
chr8 (30-101)||(3714443-3714514)
chr8 (29-101)||(22012280-22012352)
chr8 (142-205)||(31203005-31203068)
chr8 (33-101)||(22013166-22013234)
chr8 (30-101)||(3713185-3713256)
chr8 (33-88)||(31203071-31203126)
chr8 (40-101)||(20066216-20066277)
chr8 (156-205)||(43134079-43134128)
chr8 (156-191)||(3713114-3713149)
chr8 (34-80)||(43133976-43134022)
chr8 (134-165)||(522165-522196)
chr8 (132-163)||(3714586-3714617)
chr8 (405-455)||(13341371-13341421)
chr8 (132-161)||(9245497-9245526)
chr8 (132-161)||(30640821-30640850)
chr8 (132-161)||(43134115-43134144)
chr8 (133-165)||(20310119-20310151)
chr8 (133-165)||(21096752-21096784)
[»] chr1 (34 HSPs)
chr1 (29-248)||(51693143-51693362)
chr1 (29-205)||(7111378-7111554)
chr1 (29-244)||(17244175-17244390)
chr1 (29-245)||(7110225-7110441)
chr1 (29-244)||(51468339-51468554)
chr1 (29-248)||(52086623-52086840)
chr1 (39-205)||(5488780-5488946)
chr1 (43-238)||(50484913-50485108)
chr1 (46-245)||(18819261-18819460)
chr1 (29-201)||(45228318-45228490)
chr1 (29-205)||(51468804-51468980)
chr1 (32-163)||(52761502-52761633)
chr1 (43-205)||(5488540-5488702)
chr1 (29-245)||(52759362-52759578)
chr1 (46-205)||(40187642-40187800)
chr1 (31-205)||(45229508-45229682)
chr1 (29-205)||(38235053-38235228)
chr1 (31-205)||(52087679-52087853)
chr1 (30-242)||(47533758-47533970)
chr1 (39-205)||(1821947-1822114)
chr1 (29-247)||(50483508-50483725)
chr1 (45-245)||(1823215-1823411)
chr1 (82-245)||(17245621-17245783)
chr1 (31-101)||(21203154-21203224)
chr1 (50-205)||(47532996-47533150)
chr1 (149-243)||(25181502-25181596)
chr1 (132-165)||(25181520-25181553)
chr1 (133-165)||(18820823-18820855)
chr1 (132-166)||(5488933-5488967)
chr1 (132-165)||(51468967-51469000)
chr1 (133-162)||(52087841-52087870)
chr1 (30-74)||(18820679-18820723)
chr1 (133-165)||(38235216-38235248)
chr1 (133-165)||(45229670-45229702)
[»] chr6 (24 HSPs)
chr6 (29-245)||(32348940-32349156)
chr6 (31-246)||(11801247-11801462)
chr6 (29-205)||(34996664-34996840)
chr6 (29-246)||(32347806-32348023)
chr6 (29-205)||(3000696-3000872)
chr6 (29-205)||(32713786-32713962)
chr6 (29-205)||(34995391-34995566)
chr6 (29-245)||(18572884-18573099)
chr6 (29-248)||(32712351-32712570)
chr6 (29-190)||(19383058-19383218)
chr6 (112-205)||(29479180-29479273)
chr6 (34-143)||(21094506-21094615)
chr6 (38-141)||(27719839-27719941)
chr6 (132-249)||(18574299-18574416)
chr6 (29-95)||(21095282-21095348)
chr6 (29-80)||(18574216-18574267)
chr6 (30-80)||(29477904-29477954)
chr6 (43-100)||(7628469-7628526)
chr6 (34-93)||(7629715-7629773)
chr6 (132-165)||(3000859-3000892)
chr6 (133-165)||(29477778-29477810)
chr6 (41-100)||(13562214-13562273)
chr6 (41-77)||(13561440-13561476)
chr6 (133-161)||(34995375-34995403)
[»] chr5 (24 HSPs)
chr5 (29-247)||(19229976-19230194)
chr5 (29-242)||(19228840-19229053)
chr5 (29-248)||(12372310-12372529)
chr5 (46-244)||(9083216-9083414)
chr5 (34-245)||(39350553-39350764)
chr5 (41-245)||(18654295-18654500)
chr5 (29-205)||(13278134-13278310)
chr5 (42-246)||(9081977-9082181)
chr5 (40-246)||(18655566-18655772)
chr5 (29-205)||(39349519-39349695)
chr5 (29-205)||(39164095-39164269)
chr5 (29-205)||(12373620-12373800)
chr5 (29-248)||(13276815-13277026)
chr5 (29-201)||(6803528-6803699)
chr5 (29-162)||(4031903-4032038)
chr5 (29-166)||(4032928-4033065)
chr5 (136-244)||(8447077-8447185)
chr5 (143-201)||(6802017-6802075)
chr5 (361-456)||(30213403-30213498)
chr5 (371-476)||(40172584-40172692)
chr5 (132-165)||(8447096-8447129)
chr5 (30-100)||(42962162-42962232)
chr5 (114-162)||(3944702-3944750)
chr5 (133-161)||(35952503-35952531)
[»] scaffold0878 (2 HSPs)
scaffold0878 (34-246)||(2934-3147)
scaffold0878 (29-165)||(1848-1983)
[»] chr2 (23 HSPs)
chr2 (34-247)||(27892244-27892457)
chr2 (29-205)||(16602764-16602940)
chr2 (29-246)||(27891104-27891321)
chr2 (29-205)||(38243858-38244034)
chr2 (46-205)||(23833007-23833165)
chr2 (67-242)||(26388220-26388395)
chr2 (29-184)||(38242943-38243095)
chr2 (132-245)||(16604195-16604308)
chr2 (154-247)||(23833898-23833991)
chr2 (136-205)||(43814560-43814629)
chr2 (30-101)||(5033602-5033673)
chr2 (156-205)||(5033517-5033566)
chr2 (156-205)||(15496084-15496133)
chr2 (156-201)||(5034846-5034891)
chr2 (34-101)||(5034743-5034810)
chr2 (34-101)||(12365929-12365996)
chr2 (29-80)||(16604112-16604163)
chr2 (132-161)||(5033501-5033530)
chr2 (132-165)||(16602744-16602777)
chr2 (132-165)||(19577392-19577425)
chr2 (136-165)||(23833940-23833969)
chr2 (364-436)||(43631967-43632040)
chr2 (137-165)||(43814540-43814568)
[»] scaffold0141 (2 HSPs)
scaffold0141 (43-244)||(31033-31234)
scaffold0141 (43-244)||(35202-35403)
[»] scaffold0049 (2 HSPs)
scaffold0049 (43-244)||(79409-79610)
scaffold0049 (43-244)||(83578-83779)
[»] scaffold1425 (2 HSPs)
scaffold1425 (29-245)||(1504-1720)
scaffold1425 (34-246)||(132-343)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-244)||(25252-25463)
[»] scaffold0026 (3 HSPs)
scaffold0026 (138-249)||(104296-104407)
scaffold0026 (29-90)||(104405-104466)
scaffold0026 (132-165)||(104320-104353)
[»] scaffold0349 (1 HSPs)
scaffold0349 (38-141)||(9261-9363)
[»] scaffold0171 (1 HSPs)
scaffold0171 (39-84)||(29122-29167)
[»] scaffold1594 (1 HSPs)
scaffold1594 (388-472)||(260-344)
[»] scaffold1549 (1 HSPs)
scaffold1549 (388-472)||(1252-1336)


Alignment Details
Target: chr4 (Bit Score: 140; Significance: 4e-73; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 245 - 476
Target Start/End: Original strand, 50745104 - 50745352
Alignment:
Q  245 taaattgtatattatggccagagtagtcaacagcgcgatatagtggtgtagctgagtggcaagtaatggtaggagccgagccgagcaacttaggttagcg 344  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  50745104 taaattgtatattatggccagagtagtcaatagcacgatatagtggtgtagccgagtggcaagtaatggtaggagccgggccgagcaactcaggttagcg 50745203  T
Q  345 actgctcc---------agcagttc--------gcgggtagcggattcggatccgctattgtattttaacacaaaaattccaaattgaccctactttcaa 427  Q
    ||||||||         ||||||||        ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  50745204 actgctccagcagctatagcagttcgcgtgtaggcgggtagcggattcggatccactattgtattttaacacataaatcccaaattgaccctactttcaa 50745303  T
Q  428 aactattttcagggcattttggggatttcaaattaaccttaacattttc 476  Q
    |||| |||| | ||||||||||||||||||||||| |||||||||||||    
T  50745304 aactgttttgaaggcattttggggatttcaaattagccttaacattttc 50745352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 245 - 476
Target Start/End: Complemental strand, 18123999 - 18123751
Alignment:
Q  245 taaattgtatattatggccagagtagtcaacagcgcgatatagtggtgtagctgagtggcaagtaatggtaggagccgagccgagcaacttaggttagcg 344  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||  ||||||||||||||||||| |||||||||| |||||||||    
T  18123999 taaattgtatattatggtcagagtagtcaatagcgcaatatagtggtgtagccgagtgcaaagtaatggtaggagccgatccgagcaactcaggttagcg 18123900  T
Q  345 actgctccagcag---------ttcgcg--------ggtagcggattcggatccgctattgtattttaacacaaaaattccaaattgaccctactttcaa 427  Q
    |||||||||||||         ||||||        ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  18123899 actgctccagcagctatagcagttcgcgtgtaggcgggtagcggattcggatccgctattgtattttaacacataaatcccaaattgaccctactttcaa 18123800  T
Q  428 aactattttcagggcattttggggatttcaaattaaccttaacattttc 476  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||    
T  18123799 aactgttttgagggcattttggggatttcaaattaaccctaacattttc 18123751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 29 - 247
Target Start/End: Complemental strand, 22622082 - 22621864
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  22622082 agaagaaagtaaataaattcggtgtcggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 22621983  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||  || |    
T  22621982 attggaccaaattgaataaaagaaataagtaaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggactg 22621883  T
Q  229 gcagatcaattaagcctaa 247  Q
    |||||||||||||||||||    
T  22621882 gcagatcaattaagcctaa 22621864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 10803104 - 10802889
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||||||||||       || | |||||||||||||||    
T  10803104 agaagaaagtaaataaattcggtgttggtgatacaatataaaatctgataaacctccgtaatccaacggtctctttttttagggtattaaaattatcaaa 10803005  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||        |||||||||  | ||    
T  10803004 attggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaatttatgggaccaaattgaataaaagaaataagttaagggatcg 10802905  T
Q  229 gcagatcaattaagcc 244  Q
    ||||||||||||||||    
T  10802904 gcagatcaattaagcc 10802889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 38032323 - 38032538
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  38032323 agaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 38032422  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||  |||||||||||||        ||| |||||  ||||    
T  38032423 attggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccg 38032522  T
Q  229 gcagatcaattaagcc 244  Q
    ||||||||||||||||    
T  38032523 gcagatcaattaagcc 38032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 29 - 246
Target Start/End: Original strand, 7261446 - 7261663
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||        || |||||||||||||||||    
T  7261446 agaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaatggtctatttttttaggggattaaaattatcaaa 7261545  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||        |||||||||  ||||    
T  7261546 attggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccg 7261645  T
Q  229 gcagatcaattaagccta 246  Q
    | ||||||||||||||||    
T  7261646 gtagatcaattaagccta 7261663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 34095562 - 34095738
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||       || |||||||||||||||||    
T  34095562 agaagaaagtaaataaattaggtgtgggtgatacactataaaatctgatagacctccgtaattcaacggtctccttttttaggggattaaaattatcaaa 34095661  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  34095662 attggaccaaattgaacaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 34095738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 38031383 - 38031164
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||        |  |||||||||||||||||    
T  38031383 agaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaattcaacggtctttttttttatgggattaaaattatcaaa 38031284  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||        ||| |||||  ||||    
T  38031283 attggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccg 38031184  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  38031183 gcagatcaattaagcctaaa 38031164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 22623046 - 22623222
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  22623046 agaagagagtaaataaattagatgttggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttgtaggggattaaaattatcaaa 22623145  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||    
T  22623146 attggaccaaattgaataaaagaaataagtaaagggacgtgcttgagaaagttaagacttatgggaccaaattgaat 22623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 8815260 - 8815436
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |        || |||||||||||||||||    
T  8815260 agaagaaagtaaataaatttggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtttttttttttagaggattaaaattatcaaa 8815359  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  8815360 attggaccaatttgaatagaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 8815436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 30 - 246
Target Start/End: Original strand, 10804099 - 10804315
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||        |||||||||||||||||||||    
T  10804099 gaagaaagtaaataaattaggcgttgatgatacactgtaaaatctgatagacctccgtaatccaacggtctttttttttagtggattaaaattatcaaaa 10804198  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccgg 229  Q
    ||| |||||||||||||||||||||||||||||| |  | ||| ||||||||||||||||| ||||||||||||||        |||||||||  |||||    
T  10804199 ttgaaccaaattgaataaaagaaataagttaaggaacttatttaagaaagttaaaacttataggaccaaattgaataaaagaaataagttaagggaccgg 10804298  T
Q  230 cagatcaattaagccta 246  Q
    |||||||||||||||||    
T  10804299 cagatcaattaagccta 10804315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 17356576 - 17356360
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  17356576 agaagaaagtaaatgaactaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 17356477  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | ||||||||||        |||||||||  ||||    
T  17356476 attggaacaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttctggcatcaaattgaataaaagaaataagttaagggaccg 17356377  T
Q  229 gcagatcaattaagcct 245  Q
     ||||||||||||||||    
T  17356376 acagatcaattaagcct 17356360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 29 - 243
Target Start/End: Original strand, 23757873 - 23758088
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||        | |||||||||||||||||    
T  23757873 agaagaaagtaaataaattaggtgttggtgatacaccataaaatctgatagacctccgtaattcaacggtctctttttttggaggattaaaattatcaaa 23757972  T
Q  129 attggaccaaa-ttgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaacc 227  Q
    |||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||        ||| ||||  ||||    
T  23757973 attggatcaaaatttaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagactaaattgaataaaagaaataaattaaagaacc 23758072  T
Q  228 ggcagatcaattaagc 243  Q
    ||||||||||||||||    
T  23758073 ggcagatcaattaagc 23758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 5433310 - 5433486
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||| |||||       || | |||||||||||||||    
T  5433310 agaagaaattaaataaattaggtgtttgtgatacattataaaatctgatagacctccgtaatacaacagtctcaatttttagggtattaaaattatcaaa 5433409  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||  ||||||||||||| ||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||    
T  5433410 attggagtaaattgaataaaataaataagttaaggcacatgtttgagaaagttaaaacttataggaccaaattgaat 5433486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 18091795 - 18091579
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||       |   ||||||||||||||||    
T  18091795 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatcaaa 18091696  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||| ||||||||||||| | ||||||||| ||| || |||||||||||||| |||||||  |||||||| |||        |||||||||  | ||    
T  18091695 attggactaaattgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcg 18091596  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  18091595 gcagatcaattaagcct 18091579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 17357778 - 17357978
Alignment:
Q  41 ataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaat 140  Q
    |||||||| || ||| ||||||| ||||||||||| |||| ||||||||| ||||||||||       ||  |||||||||||||||||||||| || ||    
T  17357778 ataaattaagtattgctgatacattataaaatctggtagacctccgtaattcaacggtctcttttttcaggagattaaaattatcaaaattggatcatat 17357877  T
Q  141 tgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaatta 240  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||        |||||||||  ||||||||||||||||    
T  17357878 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 17357977  T
Q  241 a 241  Q
    |    
T  17357978 a 17357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 38 - 205
Target Start/End: Complemental strand, 8814340 - 8814174
Alignment:
Q  38 taaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggacca 137  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||        || | |||||||||||||||||| |||||    
T  8814340 taaataaattaggtgttggtgttacactataaaatctgatagacctccgtaatccaacagtct-attttttagggtattaaaattatcaaaattcgacca 8814242  T
Q  138 aattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||| | ||||||||| |||||||||    
T  8814241 aattgaataaaagaaataagttaagggacatgtttgagaaagataagatttatgggactaaattgaat 8814174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 48499573 - 48499403
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||||||| ||||||| ||||||||||||||  |||||||||||||| ||| ||||||||||| ||||       || ||||||||||||||||||||||    
T  48499573 aaagtaaa-aaattagatgttggtgatacaccgtaaaatctgatagacctctgtaatccaacgatctctttttttaggggattaaaattatcaaaattgg 48499475  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||| |||||||||||||||  ||||||| |||||||| | |||||||||||||||||||    
T  48499474 accaaattgaataaaataaataagttaagggacatgtttgaaaaagttaagaattatgggaccaaattgaat 48499403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 56234924 - 56235099
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||| ||  |||||        || ||||||||| |||||||    
T  56234924 agaagaaagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaattcattggtct-gttttttagaggattaaaagtatcaaa 56235022  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| || ||||||||||    
T  56235023 attagaccgaattgaataaaagaaataagttaaggggtgtgtttgataaagttaagacttatgagatcaaattgaat 56235099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 48501227 - 48501402
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||| |||||||||       || ||||||||| ||| |||    
T  48501227 agaagaaagtaaataaattaggtgttgatgatacacaataaaatctgacagacctccgtaatctaacggtctctttttttaggggattaaaa-tattaaa 48501325  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| ||||||||||||||||||||||||||||| |||  |||||||||||||||| | |||||  ||| ||||||||    
T  48501326 attagaccaaattgaataaaagaaataagttaaaggacatgtttgagaaagttaagaattatgaaacctaattgaat 48501402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 70 - 205
Target Start/End: Original strand, 35193140 - 35193275
Alignment:
Q  70 aatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtg 169  Q
    ||||||||||| ||||||||||||||||||||       || |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  35193140 aatctgatagacctccgtaatccaacggtctctttttctaggggattaaaattatcaaaaatggaccaaattgaataaaagaaataagttaaaggacgtg 35193239  T
Q  170 tttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||   ||||| |||||||||||||    
T  35193240 tttgagaaagttaagttttatgagaccaaattgaat 35193275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 39 - 205
Target Start/End: Complemental strand, 35192019 - 35191856
Alignment:
Q  39 aaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaa 138  Q
    |||||||||||||| ||||   |||||||||||| |||||||  |||||||||||||| ||||       || ||||||||||||||||||||| || ||    
T  35192019 aaataaattaggtggtggt---acactataaaatttgatagacttccgtaatccaacgttctctttttttaggggattaaaattatcaaaattgaactaa 35191923  T
Q  139 attgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| |||||||  ||||||||||||    
T  35191922 attgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgaaaccaaattgaat 35191856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 56233856 - 56233763
Alignment:
Q  112 ggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | ||||||| |||||||||||||    
T  56233856 ggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttgagacttatgcgaccaaattgaat 56233763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 35925906 - 35925792
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||        ||  ||||||||||||||||    
T  35925906 agaagaaagtaaataaattaggtgttgacgatacactataaaatctgatagatctccgtaatccaacagtctttttttttagaagattaaaattatcaaa 35925807  T
Q  129 attggaccaaattga 143  Q
    ||| || ||||||||    
T  35925806 atttgatcaaattga 35925792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 35927019 - 35927133
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||        ||  ||||||||||||||||    
T  35927019 agaagaaagtaaataaattaggtgttggtgatacactataaaatctggtagaccttcgtaatccaacgatctttttttttaggagattaaaattatcaaa 35927118  T
Q  129 attggaccaaattga 143  Q
    |||||| ||||||||    
T  35927119 attggatcaaattga 35927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 36074701 - 36074873
Alignment:
Q  33 gaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattat-caaaatt 131  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| |||        |   |||||||| |||  ||||||    
T  36074701 gaaattaaataaattaggtgttggtgatacactataaaatatgatagaccttcgtaatccaacgatct--ttttttatgagattaaaaatataaaaaatt 36074798  T
Q  132 ggaccaaattgaataaaagaaataagttaagggatgtgtttgagaa-agttaaaacttatgggaccaaattgaat 205  Q
     ||||||||||||||||| ||||||||||||| | ||| ||||||| |||||||| ||||||||| |||||||||    
T  36074799 agaccaaattgaataaaaaaaataagttaaggaacgtgcttgagaagagttaaaatttatgggactaaattgaat 36074873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 48463014 - 48463104
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagccta 246  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||        |||||||||  ||| ||||||||||||||||||    
T  48463014 agttaagggatgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagccta 48463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 34122827 - 34122923
Alignment:
Q  151 aaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcctaa 247  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||||        |||||||||  |||| ||||||||||||||||||    
T  34122827 aaatgagttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcctaa 34122923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 48081283 - 48081355
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||| || | ||||||||||||||    
T  48081283 agaagaaagtaaataaattaggtgttggtgatacagtataaactctcatagatatctggaatccaacggtctc 48081355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 48081597 - 48081669
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||| |||||||| ||||||||||||    
T  48081597 gaccaaattgaataaaagaaataagttaagggacatatttgaaaaagttaagacttatggaaccaaattgaat 48081669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 34122725 - 34122796
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| | |||||||| ||||    
T  34122725 gaagaaagtaaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaacgttctc 34122796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 48081470 - 48081536
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaac 95  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||||| ||||||||    
T  48081470 agaagaaagtaaataaattaggtgttggtgatacattataaactctgaaagacctccgcaatccaac 48081536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 48462907 - 48462978
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||| | |||||| ||||||| ||||| ||||||||||||||| |||||||||| ||||    
T  48462907 gaagaaagtaaataaatcatgtgttgatgatacagtataagatctgatagatctccctaatccaacgatctc 48462978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 34121387 - 34121298
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||||||||        ||| |||||  |||||||||||||||||||||    
T  34121387 agttaagtgatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcct 34121298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 48080376 - 48080267
Alignment:
Q  138 aattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaa 237  Q
    |||||||||||||||||||||||| |||   ||||||||||||||| |||||||  |||||||| |||        |||||||||  |||| ||||||||    
T  48080376 aattgaataaaagaaataagttaaaggacaagtttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagtgaccgacagatcaa 48080277  T
Q  238 ttaagcctaa 247  Q
    ||||||||||    
T  48080276 ttaagcctaa 48080267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 48081552 - 48081609
Alignment:
Q  148 aagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  48081552 aagaaataacttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 48081609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 56233923 - 56233878
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatct 74  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  56233923 agaagaaagtaaataaattaggtgttggcgatacactataaaatct 56233878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 476
Target Start/End: Original strand, 30495887 - 30496002
Alignment:
Q  361 gcgggtagcggattcggatccgctattgtattttaacacaaaaattccaaattgaccctactttcaaaactattttcagggcattttggggatttcaaat 460  Q
    ||||||| |||||||  |||  ||||||||||||||||  ||||| |||||||||||||| ||| |||||| |||| ||| || | ||||||||||  ||    
T  30495887 gcgggtatcggattcttatctactattgtattttaacaggaaaatcccaaattgaccctaattttaaaactgttttaaggacactctggggatttcggat 30495986  T
Q  461 taaccttaacattttc 476  Q
    ||||| ||||| ||||    
T  30495987 taaccctaacaatttc 30496002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 34122868 - 34122901
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  34122868 ggaccaaattgaataaaagaaataagttaaggga 34122901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 48462333 - 48462272
Alignment:
Q  33 gaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaa 94  Q
    |||||||||||||| |  ||||||||||||||||||| || |||||||||||| | ||||||    
T  48462333 gaaagtaaataaatcaaatgttggtgatacactataagatatgatagatctcccttatccaa 48462272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 48463051 - 48463083
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  48463051 gaccaaattgaataaaagaaataagttaaggga 48463083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 56233775 - 56233743
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  56233775 gaccaaattgaataaaagaaataagttaaggga 56233743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 35191867 - 35191836
Alignment:
Q  134 accaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||    
T  35191867 accaaattgaataaaagaaataagttaaggga 35191836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 48499416 - 48499385
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagg 163  Q
    ||||||||||||||||||||||||||||||||    
T  48499416 ggaccaaattgaataaaagaaataagttaagg 48499385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 34121494 - 34121428
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacg 96  Q
    |||||| |||||||||| |  ||||||||||||||| |||  |||||||||||||| | ||||||||    
T  34121494 gaagaatgtaaataaatcaaatgttggtgatacactgtaagctctgatagatctccctcatccaacg 34121428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 5433473 - 5433502
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  5433473 ggaccaaattgaataaaagaaataagttaa 5433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 8814187 - 8814154
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    |||| |||||||||||||||||||||||||||||    
T  8814187 ggactaaattgaataaaagaaataagttaaggga 8814154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 48081393 - 48081426
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||| ||||||||||||||    
T  48081393 ggaccaaattgaataaaaggaataagttaaggga 48081426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 161
Target Start/End: Original strand, 8815424 - 8815452
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaa 161  Q
    |||||||||||||||||||||||||||||    
T  8815424 gaccaaattgaataaaagaaataagttaa 8815452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 34095726 - 34095758
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||| |||||||||||||||    
T  34095726 gaccaaattgaataaaaaaaataagttaaggga 34095758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 34121350 - 34121318
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||| ||||||||    
T  34121350 gaccaaattgaataaaagaaataaattaaggga 34121318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 35193263 - 35193295
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||| ||||||||    
T  35193263 gaccaaattgaataaaagaaataaattaaggga 35193295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 245 - 476
Target Start/End: Complemental strand, 4360102 - 4359854
Alignment:
Q  245 taaattgtatattatggccagagtagtcaacagcgcgatatagtggtgtagctgagtggcaagtaatggtaggagccgagccgagcaacttaggttagcg 344  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||  ||||||||||||||||||| |||||||||| |||||||||    
T  4360102 taaattgtatattatggtcagagtagtcaatagcgcaatatagtggtgtagccgagtgcaaagtaatggtaggagccgatccgagcaactcaggttagcg 4360003  T
Q  345 actgctccagcag---------ttcgcg--------ggtagcggattcggatccgctattgtattttaacacaaaaattccaaattgaccctactttcaa 427  Q
    |||||||||||||         ||||||        ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  4360002 actgctccagcagctatagcagttcgcgtgtaggcgggtagcggattcggatccgctattgtattttaacacataaatcccaaattgaccctactttcaa 4359903  T
Q  428 aactattttcagggcattttggggatttcaaattaaccttaacattttc 476  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||    
T  4359902 aactgttttgagggcattttggggatttcaaattaaccctaacattttc 4359854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 28777590 - 28777809
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  28777590 agaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 28777689  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||        ||| |||||  ||||    
T  28777690 attggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccg 28777789  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  28777790 gcagatcaattaagcctaaa 28777809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 31937250 - 31937034
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  31937250 agaagaaagtaaaaaaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 31937151  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||        |||||||||  ||||    
T  31937150 attggaccaaaatgaataaaataaataagtgaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccg 31937051  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  31937050 gcagatcaattaagcct 31937034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 29 - 242
Target Start/End: Original strand, 43393956 - 43394170
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||       || || ||||||||||||||    
T  43393956 agaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggggttaaaattatcaaa 43394055  T
Q  129 attggaccaaattgaataaaag-aaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaacc 227  Q
    |||||||||| ||||||||||| ||||||||||||||| || |||||||||||||| ||||||| |||||||||||||        |||||||||  |||    
T  43394056 attggaccaatttgaataaaagaaaataagttaagggacgtctttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggacc 43394155  T
Q  228 ggcagatcaattaag 242  Q
    |||||||||||||||    
T  43394156 ggcagatcaattaag 43394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 47431090 - 47431266
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||       || |||||||||||||||||    
T  47431090 agaagaaagtaaataaattaggtgtgggtgatacactataaaatctaatagacctccataatccaacggtctctttttttaggggattaaaattatcaaa 47431189  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||| |||||||||||||||||| | |||||||| |||||||||||||||| |||||||||||||    
T  47431190 attggaccaaattgaacaaaagaaataagttaaggaacgtgtttgaaaaagttaaaacttatgagaccaaattgaat 47431266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 31938216 - 31938425
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||       || ||||||||||||| ||||||||    
T  31938216 aaagtaaa-aaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctctttttttaggggattaaaattattaaaattgg 31938314  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcaga 233  Q
    || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||  |||||||||    
T  31938315 actaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcaga 31938414  T
Q  234 tcaattaagcc 244  Q
    |||||||||||    
T  31938415 tcaattaagcc 31938425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 243
Target Start/End: Original strand, 35759134 - 35759348
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||          | ||||||||||||||||    
T  35759134 agaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtctgttttttttttagattaaaattatcaaa 35759233  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||        |||||||||  ||||    
T  35759234 attggaccaaattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccg 35759333  T
Q  229 gcagatcaattaagc 243  Q
    |||||||||||||||    
T  35759334 gcagatcaattaagc 35759348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 17116416 - 17116200
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||       || |||||||||||||||||    
T  17116416 agaagaaagtgaataaattaggtgttggtgatacactataaactctgatggacctccgtaatccaacggtgtcattttttag-ggattaaaattatcaaa 17116318  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||        |||||||||  | ||    
T  17116317 attgaaccaaattgaataaaagaaataagttaagggacgtgtttgagaaacttaacacttatgagaccaaattgaataaaagaaataagttaagggatcg 17116218  T
Q  229 gcagatcaattaagccta 246  Q
    ||||||||||||||||||    
T  17116217 gcagatcaattaagccta 17116200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 46902546 - 46902370
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| |||  ||||       || |||||||||||||||||    
T  46902546 agaagaaagtaaataaatttggtgttagtgatacactataaaatctgatagacctccgtaatctaacaatctcttcttttaggggattaaaattatcaaa 46902447  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  46902446 attgcaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaat 46902370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 55209996 - 55209821
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||        |||||||||||||||||||    
T  55209996 agaataaagtaaataaattaggtgttggtaatacactataaattctgatagacctccgtaatccaatggtctcttttttc-gtggattaaaattatcaaa 55209898  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  55209897 attggaccaaattaaataaaagaaataaattaagggacgtgtttgagaaagttaaaacttatggaaccaaattgaat 55209821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 2233208 - 2233423
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||       || |||||||||||||||||    
T  2233208 agaagaaagtaattaaattaggtgttggtgatacgctataaaatcttatagatctccataatccaacgatctctttttttagaggattaaaattatcaaa 2233307  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||| |||| ||||||||        |||||||||  ||||    
T  2233308 attggaccaaattgaataaaagaaataagttaagggacatgtttgacaaagttaagacttatgagaccgaattgaataaaagaaataagttaagggaccg 2233407  T
Q  229 gcagatcaattaagcc 244  Q
     |||||||||||||||    
T  2233408 acagatcaattaagcc 2233423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 28776663 - 28776487
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  28776663 agaagaaagtaaataaattaggtgttgatgatacattataaaatctgatagacctccgtaatccaacggtctctgtttttaggggattaaaattatcaaa 28776564  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||||| |||| | |||| ||| ||||||||||    
T  28776563 attggaccaaattgaataaaagaaatcagttaagggacttgtttgagaaaattaagatttataggatcaaattgaat 28776487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 46903527 - 46903703
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||        || |||||||||| ||||||    
T  46903527 agaagaaagtaaataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacggtctttttttttaggggattaaaatcatcaaa 46903626  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||| ||| |||| | |||||||||||||||||||    
T  46903627 attgtaccaaattgaataaaagaaataagttaaaggacgtgtttgaaaaacttaagatttatgggaccaaattgaat 46903703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 30 - 205
Target Start/End: Original strand, 21729092 - 21729267
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    |||||||||||||||||||||||||| |||||||||||||||| || |||| || | |||||||| ||||||       || ||||||||||||||||||    
T  21729092 gaagaaagtaaataaattaggtgttgatgatacactataaaatatggtagaccttcataatccaatggtctcattttttagaggattaaaattatcaaaa 21729191  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| | |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  21729192 ttgaatcaaattgaataaaagaaataagttaagggacgtgtttgagaaagttagaacttatgggactaaattgaat 21729267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 17741045 - 17740891
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||       |  |||||||||||||||||    
T  17741045 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaaa 17740946  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaa 183  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  17740945 attggatcaaatttaataaaagaaataagttaagggacatgtttgagaaagttaa 17740891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 19042365 - 19042211
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||       |  |||||||||||||||||    
T  19042365 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaaa 19042266  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaa 183  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  19042265 attggatcaaatttaataaaagaaataagttaagggacatgtttgagaaagttaa 19042211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 5689934 - 5689785
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||       |  |||||||||||||||||    
T  5689934 agaagaaagtaaataaattaagtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttgttttaaaggattaaaattatcaaa 5689835  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaa 178  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  5689834 attggaccaaatttaataaaagaaataagttaagggacgtgtttgggaaa 5689785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 52522141 - 52521925
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||        || |||||||| ||||||||    
T  52522141 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaactgtct-tttttttaggggattaaagttatcaaa 52522043  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||||||||||||||||| |||||||| || ||| ||||||||||||||||| |  |||| |||||||||||||        |||||||||  |||     
T  52522042 attggaccaaattgaataaaataaataagtgaaaggacgtgtttgagaaagttaagatctatgagaccaaattgaattaaagaaataagttaagggacca 52521943  T
Q  229 gcagatcaattaagccta 246  Q
    ||||||||||||| ||||    
T  52521942 gcagatcaattaaaccta 52521925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 23073277 - 23073493
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||| | ||||||||| ||||||||||       || |||||||||||||||||    
T  23073277 agaagaaagtaaataaattaggtgttggtgatacaccgtaaaatttgatacacctccgtaattcaacggtctctttttttaggggattaaaattatcaaa 23073376  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| ||||  ||||||||||||||||||||||||||  | |||||||||||||| | |||||||||||||||||||        ||||||||   ||||    
T  23073377 attgaaccagtttgaataaaagaaataagttaagggacatctttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaaggaccg 23073476  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  23073477 gcagatcaattaagcct 23073493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 54354308 - 54354512
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    ||||||||||||||||||||||| |||||||||||||| |||  |||||||| ||||||       || | |||||||||||||||||||||||||||||    
T  54354308 aaattaggtgttggtgatacactgtaaaatctgatagacctctataatccaatggtctctttttatagggaattaaaattatcaaaattggaccaaattg 54354407  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaag 242  Q
    ||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||        || ||||||  ||||||||||||||||||    
T  54354408 aatcaaagaaataagttaagggacgtgtttgagaaagttaagacttaagggaccaaattaaataaaagaaataggttaagggaccggcagatcaattaag 54354507  T
Q  243 cctaa 247  Q
    |||||    
T  54354508 cctaa 54354512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 37609536 - 37609322
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||| ||||| |||| |||||||||||||||       || ||||||||||||| |||    
T  37609536 agaagaaagtaaataaattaggtgttgatgagacactattaaatcttatagacctccctaatccaacggtctctttttttaggggattaaaattattaaa 37609437  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||| |||        ||||||||   ||||    
T  37609436 attggatcaaattgaataaaagaaataagttgagggacgtgtttgagaaagttaagacttatatgaccaaattaaataaaagaaataagttaaaggaccg 37609337  T
Q  229 gcagatcaattaagc 243  Q
    |||||||||||||||    
T  37609336 gcagatcaattaagc 37609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 17742211 - 17742372
Alignment:
Q  45 attaggtgttggtgatacactata-aaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattga 143  Q
    ||||||||||| ||||||||| || |||||||||||| ||||||||||||||||||||       || ||||||||||||||||||||||| |||||| |    
T  17742211 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 17742310  T
Q  144 ataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  17742311 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 17742372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 19043531 - 19043692
Alignment:
Q  45 attaggtgttggtgatacactata-aaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattga 143  Q
    ||||||||||| ||||||||| || |||||||||||| ||||||||||||||||||||       || ||||||||||||||||||||||| |||||| |    
T  19043531 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 19043630  T
Q  144 ataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  19043631 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 19043692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 37610666 - 37610798
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        || |||||||||||||||||    
T  37610666 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaattatcaaa 37610765  T
Q  129 attggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||| |||||||||||    
T  37610766 attggaccaaattgaataaaaaaaataagttaa 37610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 31 - 245
Target Start/End: Complemental strand, 2232815 - 2232601
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaat 130  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||| ||||||||||||| |||||        || ||||||||||||| |||||    
T  2232815 aagaaagtaaataaattaggtgttgctgatacaccgtaaaatctcatagacctccgtaatccaatggtctttttttctaggggattaaaattattaaaat 2232716  T
Q  131 tggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggc 230  Q
    ||||  |||||||||||||||||||| |||||||| || |||||||||||||| ||||||| |||||||||||||        |||||||||  | ||||    
T  2232715 tggattaaattgaataaaagaaataaattaagggacgtatttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggatcggc 2232616  T
Q  231 agatcaattaagcct 245  Q
    |||||||||||||||    
T  2232615 agatcaattaagcct 2232601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 21728125 - 21727908
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  |||||| || ||||||| ||| ||||        ||  ||||||||||||||||    
T  21728125 agaagaaggtaaataaattaggtgttggtgatacattataaaatgagatagaccttcgtaatctaacagtctacttttttaggagattaaaattatcaaa 21728026  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| | ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||        ||||||| |  ||||    
T  21728025 attgaatcaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttatgggaccg 21727926  T
Q  229 gcagatcaattaagccta 246  Q
    ||||||||||||||||||    
T  21727925 gcagatcaattaagccta 21727908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 40 - 205
Target Start/End: Original strand, 53180718 - 53180883
Alignment:
Q  40 aataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaa 139  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||       || ||||||||||||| |||||||||| |||    
T  53180718 aataaattaggtgttggtgatacactatacaatctgatagacctccgtaatccaacggtctccttttttagaggattaaaattattaaaattggactaaa 53180817  T
Q  140 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||| ||||||||||| | | ||||||||||||||||  ||||||| || ||||||||||    
T  53180818 ttgaataaaaaaaataagttaaagaacgtgtttgagaaagttacgacttatgagatcaaattgaat 53180883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 5691014 - 5691209
Alignment:
Q  45 attaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaa 144  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||       || ||||| ||||||||||||||||| ||| || ||    
T  5691014 attaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttaggggatttaaattatcaaaattgga-caagtttaa 5691112  T
Q  145 taaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaa 241  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||| ||| |||||||||        |||||||||  |||||||||||||||||    
T  5691113 taaaagaaataagttaagggacgtgtttgagaaaattaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaa 5691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 52525263 - 52525438
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||| ||  | || | |||||||||||||||       || ||||||||||||| |||    
T  52525263 agaagaaagtaaa-aaattagatgttggtgacacattataaaatcttattaaccttcataatccaacggtctctttttttaggggattaaaattattaaa 52525361  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  52525362 attggactaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgagaccaaattgaat 52525438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 11348375 - 11348590
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||       |  | |||||||||||||||    
T  11348375 agaagaaagtaaattaattaggtgt-ggtgatatactataaaatctgatagacctccgtaattcaacggtctctttttctaaggaattaaaattatcaaa 11348473  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| |||||| |||||||||||| |||||||| |  ||| ||| |||||||| ||||||| |||||||||||||        |||||||||  ||||    
T  11348474 attggatcaaattaaataaaagaaattagttaaggaacatgtatgataaagttaatacttatgagaccaaattgaataaaagaaataagttaagggaccg 11348573  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  11348574 gcagatcaattaagcct 11348590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 46 - 246
Target Start/End: Complemental strand, 54353221 - 54353021
Alignment:
Q  46 ttaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaat 145  Q
    ||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||        | ||||||||||||| |||||||||||||||||| |    
T  54353221 ttaggtgttagtgatacacgataaaatctgatagaccttcgtaatccaacggtctctttttttcggggattaaaattataaaaattggaccaaattgagt 54353122  T
Q  146 aaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    ||||||||||||||||||||  ||||||| |||||||| |||||||||| ||||||||||        ||||||||   |||| ||||||||||||||||    
T  54353121 aaaagaaataagttaagggacatgtttgataaagttaagacttatgggatcaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcct 54353022  T
Q  246 a 246  Q
    |    
T  54353021 a 54353021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 244
Target Start/End: Original strand, 10979080 - 10979293
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaat 130  Q
    ||||||||||||||||||| ||||||||||||||  |||||| ||||| | ||||||||||||| ||||||       |  ||| |||||||||||||||    
T  10979080 aagaaagtaaataaattagatgttggtgatacaccgtaaaatttgataaacctccgtaatccaatggtctcttttttaaagggactaaaattatcaaaat 10979179  T
Q  131 tggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggc 230  Q
    || | ||||||||||||||||||||||| ||  || |||||||||||| |||| | |||||||||||||||||||        |||||||||  ||||||    
T  10979180 tgaatcaaattgaataaaagaaataagtgaaatgacgtgtttgagaaatttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggc 10979279  T
Q  231 agatcaattaagcc 244  Q
    ||||||||||||||    
T  10979280 agatcaattaagcc 10979293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 35758219 - 35758083
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||| |          ||||||||||||||||||    
T  35758219 agaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtttgttttttttttggattaaaattatcaaa 35758120  T
Q  129 attggaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||||||    
T  35758119 attggaccaaattgaataaaagaaataagttaaggga 35758083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 11347026 - 11346855
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || |||| || | |||||||| ||||||       || ||||||||||||||||||    
T  11347026 gaagaaagtaaataaattaggtgttggtgatacactatacaatatggtagaccttcataatccaatggtctctcttttcaggggattaaaattatcaaaa 11346927  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    ||||| ||||||||||||||||||||| |||||| | |||||||| |||||||| | ||||  |||||||||    
T  11346926 ttggaacaaattgaataaaagaaataaattaaggcacgtgtttgataaagttaagatttatatgaccaaatt 11346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 55210811 - 55210945
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| || ||       ||||||||||||||||||||    
T  55210811 agaagaaagtaaataaattatgtgttggtgatacattataaaatctgatagatctccgtaattcaacagtatctttttttagtggattaaaattatcaaa 55210910  T
Q  129 attggaccaaattgaataaaagaaataagttaagg 163  Q
    ||||  ||||||| |||||||||||||||||||||    
T  55210911 attgatccaaatttaataaaagaaataagttaagg 55210945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 23091322 - 23091187
Alignment:
Q  113 gattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnn 212  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||| |||||||||||||           
T  23091322 gattaaaattatcaaagttggaccaaattgaataaaagaattaagttaagagacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaa 23091223  T
Q  213 ntaagttaagaaaccggcagatcaattaagcctaaa 248  Q
     |||||||| | ||||||||||||||||||||||||    
T  23091222 ataagttaaaagaccggcagatcaattaagcctaaa 23091187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 36 - 243
Target Start/End: Original strand, 53765876 - 53766083
Alignment:
Q  36 agtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggac 135  Q
    ||||||||||| || || |||||||||||| ||||||||  |||| |||||||||||||  || ||       || ||||||||||||| |||||||||     
T  53765876 agtaaataaatcagatggtggtgatacactgtaaaatctcgtagacctccgtaatccaatagtttctctttttaggggattaaaattattaaaattggat 53765975  T
Q  136 caaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatc 235  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| || ||||||||||||        |||||||||  ||| |||||||    
T  53765976 caaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagacttacggaaccaaattgaataaaagaaataagttaagggacccgcagatc 53766075  T
Q  236 aattaagc 243  Q
    ||||||||    
T  53766076 aattaagc 53766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 47429837 - 47429666
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtc--tcnnnnnnnagtggattaaaattatca 126  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||  |        || |||||||||||||||    
T  47429837 agaagaaagtaaataaattagatgttggtgatacactataaaatctaatagacctccgtaatccaacagtctttttttttttaggggattaaaattatca 47429738  T
Q  127 aaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||| ||||||       ||| ||| ||||||||||||||||| ||||||| |||||||||||||    
T  47429737 aaattggaccaaattgaacaaaaga-------taaaggacgtgtttgagaaagttaagacttatgagaccaaattgaat 47429666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 47917520 - 47917687
Alignment:
Q  33 gaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattg 132  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||  |||        || ||||||||||||| ||||||     
T  47917520 gaaagtaaataaattcggtgttggtaatacactataaaatctgataaacctccgtaatccaacaatctttatttttaggggattaaaattattaaaatta 47917619  T
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    || |||||||||||||||||||||||| ||||| ||||||||||||  ||| | ||||| |||||||||    
T  47917620 gatcaaattgaataaaagaaataagtt-agggacgtgtttgagaaaactaagatttatgagaccaaatt 47917687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 53764560 - 53764467
Alignment:
Q  112 ggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||    
T  53764560 ggattaaaattatcaaaatttgactaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgagaccaaattgaat 53764467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 205
Target Start/End: Original strand, 50881020 - 50881188
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| || |||| || | ||||||||   | |        || ||||||||||||||||||    
T  50881020 gaagaaaataaataaattaggtgttggtggtacactataaaatatggtagaccttcataatccaatttttt-------taggggattaaaattatcaaaa 50881112  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| || |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| |  ||||||||||    
T  50881113 ttgaactaaattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtggtcaaattgaat 50881188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 53178833 - 53178701
Alignment:
Q  112 ggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnn 211  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||  ||||||  | ||||||||||          
T  53178833 ggattaaaatgatcaaaattggatcaaattgaataaaagaaataagttaaggaacgtgtttgagaaagttaaggcttatgaaatcaaattgaataaaaaa 53178734  T
Q  212 nntaagttaagaaaccggcagatcaattaagcc 244  Q
      |||||||||  | ||||||||||||||||||    
T  53178733 aataagttaagggatcggcagatcaattaagcc 53178701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 50879902 - 50879782
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||| | |        |  |||||||||||||||||    
T  50879902 agaagaaaggaaacaaattaggtgttggtgatacactataaaatctgatagacctccgtaatctaacgatttttttttctatgggattaaaattatcaaa 50879803  T
Q  129 attggaccaaattgaataaaa 149  Q
    ||||||| |||||||||||||    
T  50879802 attggacaaaattgaataaaa 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 10978219 - 10978093
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| | ||||| || |||||||||||||| ||       || ||||||||||||| |||    
T  10978219 agaagaaagtaaa-aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaa 10978121  T
Q  129 attggaccaaattgaataaaagaaataa 156  Q
    ||||||| || |||||||||||||||||    
T  10978120 attggactaagttgaataaaagaaataa 10978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 33113306 - 33113379
Alignment:
Q  114 attaaaattatcaaaattggaccaaattgaat-aaaagaaataagttaagggatgtgtttgagaaagttaaaac 186  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||    
T  33113306 attaaaattatcaaaattggaccaaattgaataaaaagaaataagttaagggacgtgtttgaaaaagttaaaac 33113379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 46986077 - 46986169
Alignment:
Q  112 ggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||| ||||||||| ||||| | ||||||||||||||| |||||||||| |||||| |||||| ||||||||||||||    
T  46986077 ggattaaaattatcaaaatttgaccaaatttaataaga-aaataagttaagggacgtgtttgagagagttaagacttattggaccaaattgaat 46986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 23072171 - 23072099
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||||||||    
T  23072171 ggaccaaattgaataaaagaaataagttaagg-acgtctttgagaaagttaagacttatgggaccaaattgaat 23072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 43392738 - 43392665
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||| |||||||||||||    
T  43392738 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatgagaccaaattgaat 43392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 17117386 - 17117518
Alignment:
Q  111 tggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnn 210  Q
    ||||||||||| ||||||||| | ||||||||||||||| ||| |  |||||||| |||||||||||| |||| ||||||| |||||||||||||         
T  17117386 tggattaaaatcatcaaaatttgcccaaattgaataaaaaaaaaa--ttaagggacgtgtttgagaaacttaagacttatgagaccaaattgaataaaag 17117483  T
Q  211 nnntaagttaagaaaccggcagatcaattaagcct 245  Q
       |||||||||  |||| ||||||||||||||||    
T  17117484 aaataagttaagggaccgacagatcaattaagcct 17117518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 15290394 - 15290564
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| || |||| || | |||| ||| |||||        | || ||||||||||| ||||    
T  15290394 gaagaaaataaataaattaggtattgatgatacactataaaatatggtagaccttcataattcaatggtcttttttttaaatg-attaaaattattaaaa 15290492  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    ||||| ||||||||||||| ||||||| ||||  ||  ||||||||||| |||| ||||||| || ||||||    
T  15290493 ttggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgtgatcaaatt 15290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 33111748 - 33111815
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacg 96  Q
    ||||||||||||||||||||||||| || ||||||||||||||| | ||||| ||||||||| |||||    
T  33111748 agaagaaagtaaataaattaggtgtgggagatacactataaaattttatagacctccgtaatacaacg 33111815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 34014596 - 34014507
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    |||||||||||||||||| || |||||| | |||||||||||||||||||        |||||||||  |||||||||||||||||||||    
T  34014596 agttaagggatgtgtttgcgacagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcct 34014507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 53764959 - 53764896
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggt 98  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  53764959 aaagtaaa-aaattaagtgttggtgatacaccataaaatctgatagacctccgtaattcaacggt 53764896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 23072254 - 23072199
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctc 84  Q
    ||||||||||||||||||  |||||||| | |||||||||||||||||||||||||    
T  23072254 agaagaaagtaaataaatctggtgttggcggtacactataaaatctgatagatctc 23072199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 43392821 - 43392770
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||||    
T  43392821 agaagaaaataaataaatttggtgttggtggtacactataaaatctgataga 43392770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 24376458 - 24376547
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||||||||        ||||||||   |||||||||||||||||||||    
T  24376458 agttaagggatgtgtttgtgactgttaaaacttatgagaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 24376547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 27750461 - 27750510
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  27750461 agttaagggatgtgtttgaaaaaattaaaacttatgagaccaaattgaat 27750510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 50879594 - 50879533
Alignment:
Q  144 ataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||| |||||| |||||||| |||||| |||||||||| | |||||||||||||||||||    
T  50879594 ataaaaaaaataatttaagggacgtgtttaagaaagttaagatttatgggaccaaattgaat 50879533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 53101735 - 53101686
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    |||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  53101735 aagaaagtaaataaattaagtgttggtgatacactataagatctggtaga 53101686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 50879546 - 50879512
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagggat 166  Q
    |||||||||||||||||||||||||||||||||||    
T  50879546 ggaccaaattgaataaaagaaataagttaagggat 50879512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 17742360 - 17742393
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaagggat 166  Q
    ||||||||||||||||||||||||||||||||||    
T  17742360 gaccaaattgaataaaagaaataagttaagggat 17742393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 19043680 - 19043713
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaagggat 166  Q
    ||||||||||||||||||||||||||||||||||    
T  19043680 gaccaaattgaataaaagaaataagttaagggat 19043713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 34014560 - 34014527
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  34014560 ggaccaaattgaataaaagaaataagttaaggga 34014527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 46902383 - 46902350
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  46902383 ggaccaaattgaataaaagaaataagttaaggga 46902350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 46903690 - 46903723
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  46903690 ggaccaaattgaataaaagaaataagttaaggga 46903723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 43392677 - 43392645
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  43392677 gaccaaattgaataaaagaaataagttaaggga 43392645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 47429678 - 47429646
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  47429678 gaccaaattgaataaaagaaataagttaaggga 47429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 52525426 - 52525458
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  52525426 gaccaaattgaataaaagaaataagttaaggga 52525458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 27749291 - 27749248
Alignment:
Q  40 aataaattaggtgttggtgatacactataaaatctgatagatct 83  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  27749291 aataaatcaagtgttggtgatacactataagatctgatagatct 27749248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 46986153 - 46986188
Alignment:
Q  129 attggaccaaattgaataaaagaaataagttaaggg 164  Q
    |||||||||||||||||||||||||||| |||||||    
T  46986153 attggaccaaattgaataaaagaaataaattaaggg 46986188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 55209832 - 55209801
Alignment:
Q  134 accaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||    
T  55209832 accaaattgaataaaagaaataagttaaggga 55209801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 34015691 - 34015741
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    ||||||||||||| ||| ||||||||||||||||| |||| ||||| ||||    
T  34015691 gaagaaagtaaatcaatcaggtgttggtgatacaccataagatctggtaga 34015741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 34015834 - 34015867
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  34015834 ggaccaaattgaataaaagaaataacttaaggga 34015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 50881179 - 50881208
Alignment:
Q  136 caaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||    
T  50881179 caaattgaataaaagaaataagttaaggga 50881208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 53101839 - 53101872
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  53101839 ggaccaaattgaataaaagaaataacttaaggga 53101872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 420
Target Start/End: Complemental strand, 5171571 - 5171515
Alignment:
Q  364 ggtagcggattcggatccgctattgtattttaacacaaaaattccaaattgacccta 420  Q
    |||||||||||| ||||| |||||| |||||| ||  ||||| ||||||||||||||    
T  5171571 ggtagcggattctgatccactattgaattttagcaggaaaatcccaaattgacccta 5171515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 161
Target Start/End: Original strand, 24376495 - 24376523
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaa 161  Q
    |||||||||||||||||||||||||||||    
T  24376495 gaccaaattgaataaaagaaataagttaa 24376523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 33113378 - 33113410
Alignment:
Q  134 accaaattgaataaaagaaataagttaagggat 166  Q
    ||||||||||||||||||||||| |||||||||    
T  33113378 accaaattgaataaaagaaataaattaagggat 33113410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 165
Target Start/End: Original strand, 37610797 - 37610825
Alignment:
Q  137 aaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||    
T  37610797 aaattgaataaaagaaataagttaaggga 37610825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 47431254 - 47431286
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||| ||||||||    
T  47431254 gaccaaattgaataaaagaaataaattaaggga 47431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 4e-70; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 19217842 - 19217623
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||       || | |||||||||||||||    
T  19217842 agaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaaa 19217743  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||        |||||||||  ||||    
T  19217742 attgtaccaaattgaataaaagaaataagttaatggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccg 19217643  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  19217642 gcagatcaattaagcctaaa 19217623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 43113889 - 43113673
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||       || |||||||||||||||||    
T  43113889 agaagaaagcaaataaattaggtgctggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttttaggggattaaaattatcaaa 43113790  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||        |||||||||  ||||    
T  43113789 attggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccg 43113690  T
Q  229 gcagatcaattaagcct 245  Q
     ||||||||||||||||    
T  43113689 acagatcaattaagcct 43113673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 29 - 247
Target Start/End: Complemental strand, 29186879 - 29186661
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||       |  |||||||||||||||||    
T  29186879 agaagaaaataaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaa 29186780  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |||||||||  |||     
T  29186779 attgaaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggacca 29186680  T
Q  229 gcagatcaattaagcctaa 247  Q
    |||||||||||||||||||    
T  29186679 gcagatcaattaagcctaa 29186661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 44417672 - 44417453
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  ||||       || |||||||||||||||||    
T  44417672 agaagaaagtaaataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggattaaaattatcaaa 44417573  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||        |||||||||  ||||    
T  44417572 attggaccaaattgaagaaaataaataagttaagggacgtgtttgagaatgttaagacttatggaaccaaattgaataaaagaaataagttaagggaccg 44417473  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  44417472 gcagatcaattaagcctaaa 44417453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 29 - 249
Target Start/End: Original strand, 29187933 - 29188153
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||       || |||||||||||||||||    
T  29187933 agaagaaagtaaataaattaggtgttggtgatgcactataaaatctgatagacctctgcaatccaacggtctctttttttaggggattaaaattatcaaa 29188032  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||        ||||||||   ||||    
T  29188033 attggactaaattgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaaggaccg 29188132  T
Q  229 gcagatcaattaagcctaaat 249  Q
    |||||||| ||||||||||||    
T  29188133 gcagatcatttaagcctaaat 29188153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 18788463 - 18788681
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||        || |||||||||||||||||    
T  18788463 agaagaaagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaacggtctatttttttagaggattaaaattatcaaa 18788562  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| | |||| |||||| |||||||        ||| |||||  ||||    
T  18788563 attggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagatttataggaccatattgaataaaagaaataaattaagggaccg 18788662  T
Q  229 gcagatcaattaagcctaa 247  Q
    ||| |||||||||||||||    
T  18788663 gcatatcaattaagcctaa 18788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 43962472 - 43962693
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||||| || ||||||||||||||||        ||  ||||||||||||||||    
T  43962472 agaagaaaggaaataaattaggtgttagtgatatactataaaatctgatagaccttcgtaatccaacggtctgtttttttagatgattaaaattatcaaa 43962571  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||| |||||||||||||        |||||||||  ||||    
T  43962572 attggatcaaattgaataaaagaaataagttaagggacatgtttgagaaagctaagacttatgtgaccaaattgaataaaagaaataagttaagggaccg 43962671  T
Q  229 gcagatcaattaagcctaaatt 250  Q
    ||||||||||||||||||||||    
T  43962672 gcagatcaattaagcctaaatt 43962693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 9391734 - 9391519
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||       |  |||||||||||||||||    
T  9391734 agaagaaagtaaataaatttggtgttgatgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaaaggattaaaattatcaaa 9391635  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||| |||| | |||| ||||||||||||||        |||||||||  ||||    
T  9391634 attgtaccaaattgaataaaagaaataagtgaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccg 9391535  T
Q  229 gcagatcaattaagcc 244  Q
    ||||||||||||||||    
T  9391534 gcagatcaattaagcc 9391519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 48792658 - 48792439
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||| | |   ||||||||||||||||       ||  ||||||||||||||||    
T  48792658 agaagaaagtaaataaatttggtgttggtgatacactataaaatcttatacacccttgtaatccaacggtctctttttttaggagattaaaattatcaaa 48792559  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||| || ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||        |||||||||  ||||    
T  48792558 attagatcaaattgaataaaagaaataagttaagggacatgtttgaaaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccg 48792459  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  48792458 gcagatcaattaagcctaaa 48792439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 9392718 - 9392879
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||       || |||||||||||||||||    
T  9392718 agaagaaagtaaataaattaggtgccggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttctaggggattaaaattatcaaa 9392817  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttat 190  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  9392818 attggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttat 9392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 44420426 - 44420601
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| || |||||||||||||| ||       || | |||||||||||||||    
T  44420426 agaagaaagtaaataaattagatgttggtgatacactataaa-tctgatagaccttcgtaatccaacggtatctttttttagggcattaaaattatcaaa 44420524  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  44420525 attggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 44420601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 48793419 - 48793635
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||  ||||||||||||||||       ||  ||||||||||||||||    
T  48793419 agaagaaagtaaataaatttggtgttggtgatacactataaaatcttatacacctttgtaatccaacggtctctttttttaggagattaaaattatcaaa 48793518  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||        |||||||||  ||||    
T  48793519 attggatcaaattgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataagttaagggaccg 48793618  T
Q  229 gcagatcaattaagcct 245  Q
    ||| |||||||||||||    
T  48793619 gcaaatcaattaagcct 48793635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 33 - 244
Target Start/End: Original strand, 13750543 - 13750754
Alignment:
Q  33 gaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattg 132  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||| || ||||||||||||||||        || |||||||||||||||||||||    
T  13750543 gaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacggtctgtttttttaggggattaaaattatcaaaattg 13750642  T
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcag 232  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||||        |||||||||  ||||||||    
T  13750643 gaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgtgatcaaattgaataaaagaaataagttaagggaccggcag 13750742  T
Q  233 atcaattaagcc 244  Q
    ||||||||||||    
T  13750743 atcaattaagcc 13750754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 27072562 - 27072733
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||||| |        ||||||||||||||||||||||| |    
T  27072562 aaagtaaataaattaggtgttggtgataaactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttg 27072661  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  27072662 accaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaat 27072733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 27205751 - 27205580
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||||| |        ||||||||||||||||||||||| |    
T  27205751 aaagtaaataaattaggtgttggtgatagactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttg 27205652  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  27205651 accaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaat 27205580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 3537640 - 3537429
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||| |||||||||| |||||||| |||||||||| | ||||| || |||||||||||||| ||       || ||||||||||||| |||    
T  3537640 agaagaaagtaaa-aaattaggtgatggtgatatactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaa 3537542  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |||||||||  ||||    
T  3537541 attagactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccg 3537442  T
Q  229 gcagatcaattaa 241  Q
    |||||||||||||    
T  3537441 gcagatcaattaa 3537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 18787363 - 18787191
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||||        || |||||||||||||||||    
T  18787363 agaagaaagtaaataaattaagtgttggtgatacaccataaaatctgataaacctccgtaatccaacggtctatttttttaggggattaaaattatcaaa 18787264  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    |||||||||||||||||||||||||||||||||||||  | ||||| |||||||| | |||||||||||||||    
T  18787263 attggaccaaattgaataaaagaaataagttaagggacatatttgaaaaagttaagatttatgggaccaaatt 18787191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 45399913 - 45400084
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||       || |||||||||||||||||    
T  45399913 agaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaggggattaaaattatcaaa 45400012  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaat 200  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||  |||||||| | ||||| ||||||||    
T  45400013 attggaccaaagtaaataaaagaaataagttaagggacgtgtttgcaaaagttaagagttatgagaccaaat 45400084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 7011844 - 7011672
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnn-agtggattaaaattatcaaaattg 132  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||         | ||||||||||||||||||||||    
T  7011844 aaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattg 7011745  T
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||| |||||||  ||||||| |||||||| ||||||| || ||||||||||    
T  7011744 gaccaaattgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaat 7011672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 7027202 - 7027030
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnn-agtggattaaaattatcaaaattg 132  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||         | ||||||||||||||||||||||    
T  7027202 aaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattg 7027103  T
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||| |||||||  ||||||| |||||||| ||||||| || ||||||||||    
T  7027102 gaccaaattgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaat 7027030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 13597358 - 13597183
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| | ||       || |||||||||||||||||    
T  13597358 agaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttttagaggattaaaattatcaaa 13597259  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||| | |||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||    
T  13597258 attg-atcaaatttaataaaagaaataagttcagggacgtgtttgagaaagttaagacttataggaccaaattgaat 13597183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 37237132 - 37237300
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||       || ||||| ||||||||||||    
T  37237132 gaagaaagtaaataaattaggtgttggtcatacactataaaatctgatagacctccgtaatccaacgatctctttttttagaggatt-aaattatcaaaa 37237230  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  37237231 ttggaccaaatttaataaa--aaataagttaagggatgtgtttgagagagttaagacttatgagaccaaatt 37237300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 35 - 247
Target Start/End: Original strand, 32519658 - 32519870
Alignment:
Q  35 aagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgga 134  Q
    ||||||| ||||||||||||||||| |||||||| |||||| |||| || |||||| ||||||||||       |  ||||||||||||| ||||||| |    
T  32519658 aagtaaaaaaattaggtgttggtgacacactatacaatctggtagaccttcgtaattcaacggtctctttttttaagggattaaaattattaaaattgaa 32519757  T
Q  135 ccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagat 234  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||        ||| |||||  ||||||||||    
T  32519758 ccaaattgaataaaagaaataatttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccggcagat 32519857  T
Q  235 caattaagcctaa 247  Q
    ||||| |||||||    
T  32519858 caatttagcctaa 32519870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 43961148 - 43961000
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||||||||||||||        || |||||||||||||||||    
T  43961148 agaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagacctttgtaatccaacggtctgtttttgtagaggattaaaattatcaaa 43961049  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaa 177  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  43961048 attggatcaaattgaataaaagaaataaattaagggacgtgtttgagaa 43961000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 44748466 - 44748602
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||       || |||||||||||||||||    
T  44748466 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggattaaaattatcaaa 44748565  T
Q  129 attggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  44748566 attggaccatattgaataaaagaaataaattaaggga 44748602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 44230625 - 44230466
Alignment:
Q  46 ttaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaat 145  Q
    |||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||       || ||||| ||||||| ||||||||||||||||||||    
T  44230625 ttaggtgttgatgatacactgtaaaatctgatagacctctgtaatccaacggtctcttttcgtaggggattgaaattattaaaattggaccaaattgaat 44230526  T
Q  146 aaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||| || |||||||||    
T  44230525 aaaagaaataagttaaaggacgtgattgagaaagttaaaacttatggaactaaattgaat 44230466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 44746931 - 44746729
Alignment:
Q  39 aaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaa 138  Q
    ||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||       |  |||||||||||||||||||| ||||||    
T  44746931 aaataaattaggtgttgataatacactataaaatatgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaatttgaccaa 44746832  T
Q  139 attgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaat 238  Q
    ||||||||||||||||||||||| | |  ||||||||||| |||| ||||||  || ||||||||||        |||||||||| |||| |||||||||    
T  44746831 attgaataaaagaaataagttaacgaacatgtttgagaaaattaagacttataagatcaaattgaataaaaaaaataagttaagagaccgacagatcaat 44746732  T
Q  239 taa 241  Q
    |||    
T  44746731 taa 44746729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 26005565 - 26005430
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||  ||||||||||||||||       |||||| ||||||||||||||    
T  26005565 gaagaaagtacataaattacgtgttggtgatacactataaaatcttatagacctttgtaatccaacggtctctttttttagtggagtaaaattatcaaaa 26005466  T
Q  130 ttggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||| ||||||||||||||||||||||||||||||||    
T  26005465 ttgaaccaaattgaataaaagaaataagttaaggga 26005430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 40 - 205
Target Start/End: Complemental strand, 32518616 - 32518460
Alignment:
Q  40 aataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaa 139  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        || |||||||||||         | ||||||    
T  32518616 aataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaatt---------gaaccaaa 32518526  T
Q  140 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||    
T  32518525 ttgaataaaagaaataatttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaat 32518460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 12630779 - 12630603
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||||||||| | ||| |||||||||| |||||       || |||||||||||||||||    
T  12630779 agaagaaagtaaataaattaggtgttagtgatccataataaaatctgatatacctctgtaatccaacagtctctttttctaggggattaaaattatcaaa 12630680  T
Q  129 attggaccaaattgaataaaagaaataa-gttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaa 204  Q
    ||| ||||||||||||||||| ||| || ||||||||| |||||||||||| |||| |||| || ||||||||||||    
T  12630679 attagaccaaattgaataaaaaaaaaaaggttaagggacgtgtttgagaaaattaagacttttgagaccaaattgaa 12630603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 31 - 244
Target Start/End: Original strand, 3538478 - 3538681
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaat 130  Q
    ||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||||||||||||||||||       || ||| |||||||||||        
T  3538478 aagaaagtaaataaattagatgttggtgatacaccgtaaaatttgatagatctccgtaatccaacggtctctttttttaggggactaaaattatca---- 3538573  T
Q  131 tggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggc 230  Q
          |||||||||||||||||||||| ||  || ||||||||||||||||| ||||||| |||||||||||||        |||||||||  ||||||    
T  3538574 ------aaattgaataaaagaaataagtgaaaagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggc 3538667  T
Q  231 agatcaattaagcc 244  Q
     |||||||||||||    
T  3538668 ggatcaattaagcc 3538681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 43114990 - 43115124
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||  || |||| |||||||||||||||||||  || |||||||||||||||        |  |||||||||||||||||    
T  43114990 agaagaaagtaaataaattaggttatgatgatgcactataaaatctgatagacttcagtaatccaacggtcttcttttttaagggattaaaattatcaaa 43115089  T
Q  129 attggaccaaattgaataaaagaaataagttaagg 163  Q
    |||||| ||||||||||||||||||||||||||||    
T  43115090 attggatcaaattgaataaaagaaataagttaagg 43115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 13599160 - 13599298
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaac-ggtctcnnnnnnnagtggattaaaattatcaa 127  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||   | |        |    ||||||||||||||    
T  13599160 agaagaaagtaaataaattaggtgttactgatacactataaaatctgatagacctccgtaatccaacaattttttttttttaagatattaaaattatcaa 13599259  T
Q  128 aattggaccaaattgaataaaagaaataagttaagggat 166  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  13599260 aattggagcaaattgaataaaagaaataagttaaaggat 13599298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 13749217 - 13749082
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||| |||||||||||||||||||||||||||||  |||| | ||||| || |||||| ||||||||||       || |||||||||||||||||    
T  13749217 agaagaaattaaataaattaggtgttggtgatacacta-gaaattttatagacctacgtaattcaacggtctcattttttagaggattaaaattatcaaa 13749119  T
Q  129 attggaccaaattgaataaaagaaataagttaaggga 165  Q
    |||  | |||||| |||| ||||||||||||| ||||    
T  13749118 attaaatcaaattaaatataagaaataagttatggga 13749082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 37235941 - 37235811
Alignment:
Q  116 taaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnnta 215  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||   | |||||| |||||||| |||        ||    
T  37235941 taaaattctcaaaattggaccaaattgaatcaaagaaataagttaagggacgcgtttgagaaagttgggatttatggaaccaaattaaataaaagaaata 37235842  T
Q  216 agttaagaaaccggcagatcaattaagccta 246  Q
    |||||||  ||||||||  ||||||||||||    
T  37235841 agttaagggaccggcaggccaattaagccta 37235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 45688960 - 45688867
Alignment:
Q  151 aaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcc 244  Q
    |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||        |||||||||  |||| |||||||||||||||    
T  45688960 aaatgagttaagggatgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 45688867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 12630614 - 12630542
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||| |||||| ||||||||||| |  |||||||||||||||| ||||||| |||||||||||||    
T  12630614 gaccaaattgaagaaaagacataagttaaggaacatgtttgagaaagttaagacttatgagaccaaattgaat 12630542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 246
Target Start/End: Complemental strand, 42611528 - 42611433
Alignment:
Q  151 aaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagccta 246  Q
    |||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||        ||||||||   ||||||||||||||||||||||    
T  42611528 aaatgagttaaggagtgtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 42611433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 44231765 - 44231815
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  44231765 gaagaaagtaaataaatcaggtgttggtgatacactataaaatctggtaga 44231815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 9357700 - 9357745
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctg 75  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  9357700 gaagaaagtaaataaattaggtgttggtgatacactataagatctg 9357745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 26006773 - 26006862
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||         |||||||||  |||| ||||||||||||||||    
T  26006773 agttaagggatgtgtttgtgatagttaaaacttatgggaccaaattgaacaaaagaaataagttaagggaccgacagatcaattaagcct 26006862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 27071108 - 27071019
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||||        ||||||||   |||||||||||||||||||||    
T  27071108 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcct 27071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 27207205 - 27207294
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||||        ||||||||   |||||||||||||||||||||    
T  27207205 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcct 27207294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 450
Target Start/End: Original strand, 43853786 - 43853871
Alignment:
Q  365 gtagcggattcggatccgctattgtattttaacacaaaaattccaaattgaccctactttcaaaactattttcagggcattttggg 450  Q
    ||||||||||| |||||||||||| |||||| ||  ||||| ||||||||||||||  || ||||| ||||| |||||||||||||    
T  43853786 gtagcggattctgatccgctattggattttagcaggaaaatcccaaattgaccctaactttaaaaccattttgagggcattttggg 43853871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 45689060 - 45688991
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||||| ||||||||||||||||||   ||||||||||||||| | |||||||| ||||    
T  45689060 gaagaaagtaaataaattaagtgttggtgatacactat--gatctgatagatctcccttatccaacgatctc 45688991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 7057359 - 7057446
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagc 243  Q
    |||| ||||||||||||| ||  |||||||||||||||||||||||||||        |||||||||  |||||||||||||||||||    
T  7057359 agttgagggatgtgtttgtgacggttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 7057446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 37235994 - 37235939
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaa 89  Q
    |||||||||||||||||||||||||||||| | ||||||||||| || ||||||||    
T  37235994 aaagtaaataaattaggtgttggtgatacattgtaaaatctgattgacctccgtaa 37235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 29409151 - 29409216
Alignment:
Q  36 agtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    |||||||||||||||||||||| ||||||| | | ||||||||||||||  | |||||||||||||    
T  29409151 agtaaataaattaggtgttggttatacactgttagatctgatagatctcatttatccaacggtctc 29409216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 45398737 - 45398689
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgata 78  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||    
T  45398737 gaagaaagtaaataaattagatgttggtgatacactataagatttgata 45398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 42611626 - 42611559
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||| | || ||| ||||||||||||| ||||||||||||| | |||||||||| ||||    
T  42611626 aaagtaaataaatcaagtattgatgatacactataagatctgatagatcttcctaatccaacgatctc 42611559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 7057395 - 7057428
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  7057395 ggaccaaattgaataaaagaaataagttaaggga 7057428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 44231908 - 44231941
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  44231908 ggaccaaattgaataaaagaaataagttaaggga 44231941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 36396012 - 36395952
Alignment:
Q  40 aataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtct 100  Q
    |||||||||| ||||||||||||||| | ||||||||| ||||||| | ||||||| ||||    
T  36396012 aataaattagatgttggtgatacactgttaaatctgatggatctcctttatccaaccgtct 36395952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 43960996 - 43960964
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  43960996 gaccaaattgaataaaagaaataagttaaggga 43960964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 45688918 - 45688886
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  45688918 gaccaaattgaataaaagaaataagttaaggga 45688886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 19016725 - 19016775
Alignment:
Q  154 taagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaa 204  Q
    |||||||||||| ||| |||| ||| |||| ||||||||||||||||||||    
T  19016725 taagttaagggacgtggttgacaaatttaatacttatgggaccaaattgaa 19016775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 19218897 - 19218959
Alignment:
Q  39 aaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||||||||||||| | |||||| || || |||  | |||||||||||||    
T  19218897 aaataaattaggtgttggtgatacactgttaaatctcatggacctcttttatccaacggtctc 19218959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 47536757 - 47536827
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtct 100  Q
    |||||||||||   ||||||||||||||||||||| || | |||||||||| |||  | ||||||||||||    
T  47536757 gaagaaagtaatataattaggtgttggtgatacaccattagatctgatagacctcttttatccaacggtct 47536827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Complemental strand, 7011681 - 7011652
Alignment:
Q  136 caaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||    
T  7011681 caaattgaataaaagaaataagttaaggga 7011652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Complemental strand, 7027039 - 7027010
Alignment:
Q  136 caaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||    
T  7027039 caaattgaataaaagaaataagttaaggga 7027010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 19008983 - 19008950
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||| ||||||||||||||||||||    
T  19008983 ggaccaaattgaaaaaaagaaataagttaaggga 19008950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 26006809 - 26006842
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||| ||||||||||||||||||||    
T  26006809 ggaccaaattgaacaaaagaaataagttaaggga 26006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 27071072 - 27071043
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  27071072 ggaccaaattgaataaaagaaataagttaa 27071043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 27207241 - 27207270
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  27207241 ggaccaaattgaataaaagaaataagttaa 27207270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 32518473 - 32518440
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  32518473 ggaccaaattgaataaaagaaataaattaaggga 32518440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 44420589 - 44420622
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaagggat 166  Q
    ||||||||||||||||||||||||||||| ||||    
T  44420589 gaccaaattgaataaaagaaataagttaaaggat 44420622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 9e-68; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 9244280 - 9244061
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||       |  |||||||||||||||||    
T  9244280 agaagaaaataaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaa 9244181  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |||||||||  |||     
T  9244180 attgaaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggacca 9244081  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  9244080 gcagatcaattaagcctaaa 9244061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 26364956 - 26364741
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||       || |||||||||||||||||    
T  26364956 agaagaaactaaataaattaggtgttggtgatacattataaaatctgatagacctctgtaatccaacggtctctttttttagaggattaaaattatcaaa 26364857  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||        |||||||||  ||||    
T  26364856 attggatcaaattgaataaaagaaataagttaaaggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccg 26364757  T
Q  229 gcagatcaattaagcc 244  Q
    ||||||||||||||||    
T  26364756 gcagatcaattaagcc 26364741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 20309138 - 20308921
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||       || |||| ||||||||||||    
T  20309138 agaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaa 20309039  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||  ||||||||        |||||||||  ||||    
T  20309038 attggaccaaattgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccg 20308939  T
Q  229 gcagatcaattaagccta 246  Q
    ||||||||||||||||||    
T  20308938 gcagatcaattaagccta 20308921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 21095771 - 21095554
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||       || |||| ||||||||||||    
T  21095771 agaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaa 21095672  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||  ||||||||        |||||||||  ||||    
T  21095671 attggaccaaattgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccg 21095572  T
Q  229 gcagatcaattaagccta 246  Q
    ||||||||||||||||||    
T  21095571 gcagatcaattaagccta 21095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 9245334 - 9245510
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||       || ||||||||||||| |||    
T  9245334 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggattaaaattataaaa 9245433  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  9245434 attggactaaattgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 9245510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 41637046 - 41636870
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||       || ||||||||||||| |||    
T  41637046 agaagaaagtaaataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggattaaaattataaaa 41636947  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
     ||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||    
T  41636946 gttggaccaaattgaataaaagaaataaattaagggacgtgttttagaaagttaagacttatgggaccaaattgaat 41636870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 30641012 - 30640837
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||       || ||||||||||||| |||    
T  30641012 agaagaaagtaaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattattaaa 30640913  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||| ||||||||||||||||||||||||||  || |||||||| || |||||||||||||||||||||||||||    
T  30640912 attggatcaaattgaataaaagaaataagttaa-tgacgtgtttgataaggttaaaacttatgggaccaaattgaat 30640837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 522000 - 522176
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||||       || |||||||||||||||||    
T  522000 agaagaaagtaaataaattaggggttggtgatacactataaaatttgatagacctccgtaatccaacagtctctttttctaggggattaaaattatcaaa 522099  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| || |||||||||||||| |||||||||||||||  |||||||||||||||| |||||||| ||||||||||||    
T  522100 attagatcaaattgaataaaataaataagttaagggacatgtttgagaaagttaagacttatggaaccaaattgaat 522176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 34 - 242
Target Start/End: Complemental strand, 34642874 - 34642667
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||| |        || ||||||||||||||||||||      
T  34642874 aaagtaaataaattagatgttggtgatatactataaaatctgatagacctccgcaatccaacggttt-tttttttaggggattaaaattatcaaaattaa 34642776  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcaga 233  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||        |||||||||| |||||||||    
T  34642775 accaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataagttaagagaccggcaga 34642676  T
Q  234 tcaattaag 242  Q
    |||||||||    
T  34642675 tcaattaag 34642667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 30644608 - 30644779
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||| ||| ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  30644608 agaaaaaactaaataaattaggtgttggtgatccattataaaatttgatagacctccgtaatccaacggtctctttttt-agaggattaaaattatcaaa 30644706  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    |||||| ||||||||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||||    
T  30644707 attggatcaaattgaataaaagaaataagttaagagacgtgtttgagaaagttaagatttatgggaccaaatt 30644779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 249
Target Start/End: Complemental strand, 43584623 - 43584403
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||   ||||||||||| ||||||||||||||||  |  ||||||||||||||||       |   ||||||||||||||||    
T  43584623 agaagaaagtaaataaattagacattggtgatacattataaaatctgatagacttttgtaatccaacggtctctttttttaaaagattaaaattatcaaa 43584524  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||||        ||||||||   ||||    
T  43584523 attggatcaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagatcaaattgaataaaagaaataagttaatggaccg 43584424  T
Q  229 gcagatcaattaagcctaaat 249  Q
     ||||||||||||||||||||    
T  43584423 acagatcaattaagcctaaat 43584403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 26366097 - 26366269
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||        || ||||||||||||| |||    
T  26366097 agaagaaagtaaataaattatgtgttggtgatacactataaaatctaatagacctccgtaatctaacggtctttttttttaggggattaaaattattaaa 26366196  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    | |||||||||||||||||||||||||||||| || |  ||||||| || ||||| |||||||  ||||||||    
T  26366197 aatggaccaaattgaataaaagaaataagttatggaacatgtttgataaggttaagacttatgaaaccaaatt 26366269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 244
Target Start/End: Original strand, 41638070 - 41638270
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    |||||||||||||||||||||||||||||  ||||||| ||| |||||||||  |||||       || ||||||||||||| |||||||||||||||||    
T  41638070 aaattaggtgttggtgatacactataaaacatgatagacctctgtaatccaattgtctctttttt-aggggattaaaattattaaaattggaccaaattg 41638168  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaag 242  Q
    ||||||||||||||||||| |||  |||||||||||||||| ||||||| ||  |||||||||        |||||||||  ||||||||||||||||||    
T  41638169 aataaaagaaataagttaaaggacatgtttgagaaagttaagacttatgagaataaattgaataaaagaaataagttaagggaccggcagatcaattaag 41638268  T
Q  243 cc 244  Q
    ||    
T  41638269 cc 41638270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 20309956 - 20310131
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnn-agtggattaaaattatcaaaa 129  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||| || | ||||||||||||||         |  ||||||||||||||||||    
T  20309956 aagaaagtaaataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaa 20310055  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||| |||||    
T  20310056 ttgaaccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaat 20310131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 21096589 - 21096764
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnn-agtggattaaaattatcaaaa 129  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||| || | ||||||||||||||         |  ||||||||||||||||||    
T  21096589 aagaaagtaaataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaa 21096688  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||| |||||    
T  21096689 ttgaaccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaat 21096764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 34643878 - 34644038
Alignment:
Q  39 aaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaa 138  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||   |||||||||||||        || ||||||||||||||||||||| || ||    
T  34643878 aaataaattaggtgttggtgatacgccataaaatctgatagacctc---aatccaacggtct--ttttttaggggattaaaattatcaaaattgaactaa 34643972  T
Q  139 attgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| |||||||||||||| ||||  || ||||||||||||||||| | |||||||| ||||||||||    
T  34643973 attaaataaaagaaataaattaatagaggtgtttgagaaagttaagatttatggga-caaattgaat 34644038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 3714550 - 3714640
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagccta 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||    
T  3714550 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagccta 3714640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 43585849 - 43586019
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| || |||| || | |||||||| |||||        |  ||||||||||||| ||||    
T  43585849 gaagaaaataaataaattaggtattgatgatacactataaaatatggtagaccttcataatccaatggtcttttttttaaa-ggattaaaattattaaaa 43585947  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    ||||| ||||||||||||| ||||||| ||||  ||  ||||||||||| |||| ||||||| || ||||||    
T  43585948 ttggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgagatcaaatt 43586019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 3714443 - 3714514
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| | |||||||| ||||    
T  3714443 gaagaaagtaaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaacgatctc 3714514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 22012352 - 22012280
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||| |||  | |||||||| ||||    
T  22012352 agaagaaagtaaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctc 22012280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 31203068 - 31203005
Alignment:
Q  142 gaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||| |||||    
T  31203068 gaataaaagaaataagttaagggacgtgtttgagaaacttaagatttatgggaccaaaatgaat 31203005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 22013166 - 22013234
Alignment:
Q  33 gaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||  | |||||||| ||||    
T  22013166 gaaagtaaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctc 22013234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 3713256 - 3713185
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||| | ||||| |||||||||||||| |||| |||||||||| | |||||||| ||||    
T  3713256 gaagaaagtaaataaatcaagtgtttgtgatacactataagatctaatagatctcccttatccaacgatctc 3713185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 31203126 - 31203071
Alignment:
Q  33 gaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgta 88  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||| |||||||    
T  31203126 gaaagtaaataagttaggtgttggtgatacattataaaatttgatagacctccgta 31203071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 20066277 - 20066216
Alignment:
Q  40 aataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||  | |||||||||||||    
T  20066277 aataaattaggtgttggtgatacactgttaaatctgatggatctcttttatccaacggtctc 20066216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 43134079 - 43134128
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  43134079 agttaagggatgtgtttaagaaagttaaaagttataggaccaaattgaat 43134128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 3713149 - 3713114
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatg 191  Q
    ||||||||||||||||||||||||||||||||||||    
T  3713149 agttaagggatgtgtttgagaaagttaaaacttatg 3713114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 43133976 - 43134022
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||    
T  43133976 aaagtaaataaatcaagtgttggtgatacactataaaatctggtaga 43134022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 165
Target Start/End: Original strand, 522165 - 522196
Alignment:
Q  134 accaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||    
T  522165 accaaattgaataaaagaaataagttaaggga 522196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 3714586 - 3714617
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagg 163  Q
    ||||||||||||||||||||||||||||||||    
T  3714586 ggaccaaattgaataaaagaaataagttaagg 3714617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 13341371 - 13341421
Alignment:
Q  405 ttccaaattgaccctactttcaaaactattttcagggcattttggggattt 455  Q
    |||||||||||||||| ||| |||||  |||| ||||||||||||||||||    
T  13341371 ttccaaattgaccctattttgaaaacctttttgagggcattttggggattt 13341421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 9245497 - 9245526
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  9245497 ggaccaaattgaataaaagaaataagttaa 9245526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 30640850 - 30640821
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  30640850 ggaccaaattgaataaaagaaataagttaa 30640821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 43134115 - 43134144
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  43134115 ggaccaaattgaataaaagaaataagttaa 43134144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 20310119 - 20310151
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||| |||||||||||||||||||||||||    
T  20310119 gaccaaaatgaataaaagaaataagttaaggga 20310151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 21096752 - 21096784
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||| |||||||||||||||||||||||||    
T  21096752 gaccaaaatgaataaaagaaataagttaaggga 21096784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 9e-68; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 51693362 - 51693143
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||       || | |||||||||||||||    
T  51693362 agaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaaa 51693263  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||        |||||||||  ||||    
T  51693262 attgaaccaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccg 51693163  T
Q  229 gcagatcaattaagcctaaa 248  Q
     |||||||||||||||||||    
T  51693162 acagatcaattaagcctaaa 51693143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 7111378 - 7111554
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  7111378 agaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 7111477  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||| ||||||||||||||    
T  7111478 attggaccaaattgaataaaagaaatcagttaatggacgtgtttgagaaagttaagacttataggaccaaattgaat 7111554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 17244390 - 17244175
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||       ||  ||||||||||||||||    
T  17244390 agaagaaagtaaataaattaggtatcggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttttaggagattaaaattatcaaa 17244291  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||        ||||||||| |||||    
T  17244290 attggaccaaattgaatcaaagaaataagttaagggacgtgtttgagaaagttgagacttatgggaccaaattgaataaaagaaataagttaaggaaccg 17244191  T
Q  229 gcagatcaattaagcc 244  Q
    |||| | |||||||||    
T  17244190 gcaggttaattaagcc 17244175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 7110441 - 7110225
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| ||||       || |||||||||||||||||    
T  7110441 agaagaaagtaaataaattaggcgttgatgatacactataaaatctgatagacctccgcaatccaacgatctctttttttaggggattaaaattatcaaa 7110342  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||| |||        ||| |||||  ||||    
T  7110341 attggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattaaataaaagaaataaattaagggaccg 7110242  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  7110241 gcagatcaattaagcct 7110225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 51468554 - 51468339
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |  |||        || ||||||||||||| |||    
T  51468554 agaaaaaagtaaataaattgggtgttggtgatacactataaaatctgatagacctccgtaatccatcaatctttttttttaggggattaaaattattaaa 51468455  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||  ||||    
T  51468454 attggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggaccg 51468355  T
Q  229 gcagatcaattaagcc 244  Q
    ||||||||||||||||    
T  51468354 gcagatcaattaagcc 51468339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 52086840 - 52086623
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| | ||||| || |||||||||||||| |        || ||||||||||||| |||    
T  52086840 agaagaaagtaaaaaaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggttt--ttttttaggggattaaaattattaaa 52086743  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |||||||||  ||||    
T  52086742 attggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccg 52086643  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  52086642 gcagatcaattaagcctaaa 52086623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 5488780 - 5488946
Alignment:
Q  39 aaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaa 138  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||       |  |||||||||||||||||||||||||||    
T  5488780 aaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggaccaa 5488879  T
Q  139 attgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| ||||||||||| |||||||||    
T  5488880 attgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgggactaaattgaat 5488946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 50484913 - 50485108
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    ||||||||||||||||||||||| |||||||||||||| ||  ||||||||| ||||||       || |||||||||||||||||||||||||||||||    
T  50484913 aaattaggtgttggtgatacactgtaaaatctgatagacctatgtaatccaatggtctctttttttaggggattaaaattatcaaaattggaccaaattg 50485012  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaat 238  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||  ||||||||||||||    
T  50485013 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaatgaaataagttaagggaccggcagatcaat 50485108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 46 - 245
Target Start/End: Complemental strand, 18819460 - 18819261
Alignment:
Q  46 ttaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaat 145  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||       || ||||||||||||| |||||||| |||||||||||    
T  18819460 ttaggtgttggtgatacactataaaatctgatatacctccgtaatccaacggtttcttttcataggggattaaaattattaaaattgggccaaattgaat 18819361  T
Q  146 aaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||||        ||| ||||| ||||||||||||||||||||||    
T  18819360 aaaagaaataaattaagggacgtgattgagaaagttaagacttatgggatcaaattgaataaaaaaaataatttaaggaaccggcagatcaattaagcct 18819261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 45228490 - 45228318
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||       || ||||||||||||| |||    
T  45228490 agaagaaagtaaataaattaagcgtttgtgatacactataaaatttgatagatctccgtaatccaacggtctctttttttaggggattaaaattattaaa 45228391  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    ||||||||||||||||||||||||||||||||| | | |||||||| || ||||||| ||||||||| |||||    
T  45228390 attggaccaaattgaataaaagaaataagttaaagaacgtgtttgataaggttaaaatttatgggacaaaatt 45228318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 51468804 - 51468980
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| | | |        || ||||||||||||| |||    
T  51468804 agaagaaagtaaataaattaggtgttggtgatacactgtaaaatctaatagatctccgtaatccaatgctttttttttttaggggattaaaattattaaa 51468903  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||| |||||||| | |||||||||||||||||||    
T  51468904 attggaccaaattgaatagaagaaataagtttagggacgtgtttgaaaaagttaagatttatgggaccaaattgaat 51468980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 52761502 - 52761633
Alignment:
Q  32 agaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaatt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||       || ||||||||||||||||||||    
T  52761502 agaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgcaatccaacggtctcttttttcaggggattaaaattatcaaaatt 52761601  T
Q  132 ggaccaaattgaataaaagaaataagttaagg 163  Q
    ||||||||||||||||||||||||||||||||    
T  52761602 ggaccaaattgaataaaagaaataagttaagg 52761633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 5488702 - 5488540
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||       |  ||||||||||||||||||||||| |||||||    
T  5488702 aaattacgtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggatcaaattg 5488603  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||| ||| |||||||||||||||||  ||||||| | ||||||||||    
T  5488602 aataaaagaaataagttaaaggacgtgtttgagaaagttaagtcttatggaatcaaattgaat 5488540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 52759578 - 52759362
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||       |   ||||||||||||||||    
T  52759578 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatcaaa 52759479  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||||| ||||||||||||| | ||||||||| ||| || |||||||||||||| |||||||  |||||||| |||        |||||||||  | ||    
T  52759478 attggactaaattgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcg 52759379  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  52759378 gcagatcaattaagcct 52759362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 40187800 - 40187642
Alignment:
Q  46 ttaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaat 145  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||       || ||||||||||||| |||||||||||||||||| |    
T  40187800 ttaggtgttggtgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattataaaaattggaccaaattgagt 40187701  T
Q  146 aaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||| |||  ||||||| |||||||| |||||||||||||||||||||    
T  40187700 aaaagaaataagttaa-ggacatgtttgataaagttaagacttatgggaccaaattgaat 40187642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 45229508 - 45229682
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaat 130  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||  |||        |  |||||||||||||||||||    
T  45229508 aagaaactaaataaattaggtgttggtgatccattataaaatctgatagacctccgtaatccaacaatctttttttttataggattaaaattatcaaaat 45229607  T
Q  131 tggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||| |||| | ||||| |||||||||||||    
T  45229608 tggatcaaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttatgagaccaaattgaat 45229682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 38235053 - 38235228
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||  | |||||||||||||| |         | |||||||| |||| |||    
T  38235053 agaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacattcgtaatccaacggtttgttttttttg-ggattaaacttattaaa 38235151  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  38235152 attggaccaaatttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaat 38235228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 52087679 - 52087853
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaat 130  Q
    |||||| |||||||||||| ||||||||||||||  |||||| ||||||| ||||||||| ||||||||||       || ||| |||||||||||||||    
T  52087679 aagaaattaaataaattagatgttggtgatacaccgtaaaatttgatagacctccgtaattcaacggtctctttttttaggggactaaaattatcaaaat 52087778  T
Q  131 tggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    || | ||||||||||||||||||||||| || ||| ||||||||||||||||| || |||| |||||||||||||    
T  52087779 tgaatcaaattgaataaaagaaataagtgaaaggacgtgtttgagaaagttaagacatatgagaccaaattgaat 52087853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 30 - 242
Target Start/End: Original strand, 47533758 - 47533970
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||         | |||||| |||||||||||    
T  47533758 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctctctaatttaacggtctatttttttggaggattataattatcaaaa 47533857  T
Q  130 ttggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccgg 229  Q
    ||| | |||||||||| || ||||||| ||||| || || ||||| |||||||||||||||||||| ||||| |||        ||| |||||| ||| |    
T  47533858 ttgaatcaaattgaatgaatgaaataatttaagagacgtatttgaaaaagttaaaacttatgggactaaattaaataaaagaaataatttaagagaccag 47533957  T
Q  230 cagatcaattaag 242  Q
    |||||||||||||    
T  47533958 cagatcaattaag 47533970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 205
Target Start/End: Complemental strand, 1822114 - 1821947
Alignment:
Q  39 aaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaa 138  Q
    ||||||||||||||||  ||||||||||||||||| |||||| || ||||| |||||||||||       |  |||||||||||||||||||| ||| ||    
T  1822114 aaataaattaggtgttaatgatacactataaaatcagatagaccttcgtaacccaacggtctctttttttaaaggattaaaattatcaaaattagactaa 1822015  T
Q  139 attgaataaaagaaa-taagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||| ||||||| ||| |||||||||||| ||||||||||||||||||| |||| |||| |||||||||    
T  1822014 attaaataaaaaaaaataagttaagggacgtgtttgagaaagttaaaatttataggacaaaattgaat 1821947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 247
Target Start/End: Complemental strand, 50483725 - 50483508
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnn-agtggattaaaattatcaa 127  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||  ||||||||||||| |||||        || ||| ||||||||| ||    
T  50483725 agaagaaagtaaataaattaggtgttggttatacacgataaaatctg-tagacttccgtaatccaacagtctcttttttttaggggagtaaaattataaa 50483627  T
Q  128 aattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaacc 227  Q
    ||||||||||||||||||||||||||||| ||||  || || ||| ||||| |||| ||||||| |||||||||||||        |||||||| | |||    
T  50483626 aattggaccaaattgaataaaagaaataaattaaatgacgtttttaagaaaattaagacttatgagaccaaattgaatacaagaaataagttaa-agacc 50483528  T
Q  228 ggcagatcaattaagcctaa 247  Q
    | ||||||||||||||||||    
T  50483527 gacagatcaattaagcctaa 50483508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 245
Target Start/End: Original strand, 1823215 - 1823411
Alignment:
Q  45 attaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaa 144  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||| |        ||  |||||||||||||||||||||| |||||||||    
T  1823215 attaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtttatctttttagaagattaaaattatcaaaattggatcaaattgaa 1823314  T
Q  145 taaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcc 244  Q
    ||||| |||||||||||| ||  |||||||||   |||| ||||||| ||| |||||||||        |||||||||  ||||||||||||||||||||    
T  1823315 taaaa-aaataagttaagcgacatgtttgaga---ttaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1823410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 82 - 245
Target Start/End: Original strand, 17245621 - 17245783
Alignment:
Q  82 ctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagtt 181  Q
    |||||||||||||||||||        || |||||||||| ||||||||||||||||||| ||||||| |||||||||||||||  ||||||||| ||||    
T  17245621 ctccgtaatccaacggtctttttttttagaggattaaaatgatcaaaattggaccaaatttaataaaa-aaataagttaagggacttgtttgagagagtt 17245719  T
Q  182 aaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcct 245  Q
    || ||||||| |||||||||||||        ||| ||||| ||||||| ||||||||||||||    
T  17245720 aagacttatgagaccaaattgaataaaagaaataaattaaggaaccggcggatcaattaagcct 17245783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 21203224 - 21203154
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||    
T  21203224 aagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctttgtaatccaacggtctc 21203154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 47533150 - 47532996
Alignment:
Q  50 gtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaataaaa 149  Q
    |||||||||||||| ||||||||||||||||  ||| |||| |||| ||||        ||  |||||||||||||||||||| | |||||||||||||     
T  47533150 gtgttggtgatacattataaaatctgatagacttccataattcaacagtct-gttttttagaagattaaaattatcaaaattgaatcaaattgaataaat 47533052  T
Q  150 gaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||| |||||| | |||||||| |||||||| | ||||| |||||||||||||    
T  47533051 gaaataatttaaggaacgtgtttgataaagttaagatttatgagaccaaattgaat 47532996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 25181596 - 25181502
Alignment:
Q  149 agaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagc 243  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||        |||||||||  |||||||||||||||||||    
T  25181596 agaaataagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 25181502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 25181553 - 25181520
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  25181553 ggaccaaattgaataaaagaaataagttaaggga 25181520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 18820823 - 18820855
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  18820823 gaccaaattgaataaaagaaataagttaaggga 18820855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 5488933 - 5488967
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagggat 166  Q
    |||| ||||||||||||||||||||||||||||||    
T  5488933 ggactaaattgaataaaagaaataagttaagggat 5488967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 51468967 - 51469000
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||| |||||||||||||||    
T  51468967 ggaccaaattgaataaaaaaaataagttaaggga 51469000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 52087841 - 52087870
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaag 162  Q
    ||||||||||||||||||||||||||||||    
T  52087841 gaccaaattgaataaaagaaataagttaag 52087870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 18820679 - 18820723
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatct 74  Q
    ||||||||||||| ||| ||||||| |||||||||||| ||||||    
T  18820679 gaagaaagtaaatgaatcaggtgttagtgatacactatcaaatct 18820723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 38235216 - 38235248
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||| ||||||||    
T  38235216 gaccaaattgaataaaagaaataaattaaggga 38235248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 45229670 - 45229702
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||| ||||||||    
T  45229670 gaccaaattgaataaaagaaataaattaaggga 45229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 6e-66; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 32348940 - 32349156
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  32348940 agaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 32349039  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||  |||||||||||||        ||| |||||  ||||    
T  32349040 attggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataagaccaaattgaataaaagaaataaattaagggaccg 32349139  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  32349140 gcagatcaattaagcct 32349156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 11801247 - 11801462
Alignment:
Q  31 aagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaat 130  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||||| ||||||||||||||||||||       || |||||||||||||||||||    
T  11801247 aagaaagtaaataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaat 11801346  T
Q  131 tggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggc 230  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||        ||| |||||  ||||||    
T  11801347 tggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggc 11801446  T
Q  231 agatcaattaagccta 246  Q
    ||||||||||||||||    
T  11801447 agatcaattaagccta 11801462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 34996664 - 34996840
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||        ||  ||||||||||||||||    
T  34996664 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtctgtttttttaggagattaaaattatcaaa 34996763  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||    
T  34996764 attggaccaaattgaataaaagaaataagttaagggacgtatttgagaaagttaagacttatgggactaaattgaat 34996840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 32348023 - 32347806
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| ||||       || |||||||||||||||||    
T  32348023 agaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacccccgtaatccaacgttctctttttttaggggattaaaattatcaaa 32347924  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||  |||||||||||||        ||| ||||| ||||     
T  32347923 attggaccaaattgaataaaagaaatcacttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaaggaacca 32347824  T
Q  229 gcagatcaattaagccta 246  Q
    ||||||||||||||||||    
T  32347823 gcagatcaattaagccta 32347806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 3000696 - 3000872
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| |||        || |||||||||||||||||    
T  3000696 agaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacgatctgtgtttttaggggattaaaattatcaaa 3000795  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  3000796 attggactaaattgaataaaagaaataagttaagggaggtgtttgagaaagttaagatttatgggaccaaattgaat 3000872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 32713786 - 32713962
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |       || |||||||||||||||||    
T  32713786 agaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacctccgtaatccaacggtcactttttttaggggattaaaattatcaaa 32713885  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||| |||||| |||||    
T  32713886 attggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatggaaccaaactgaat 32713962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 34995566 - 34995391
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||        || ||||||||||||| |||    
T  34995566 agaagaaagtaaataaattagatgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttaggggattaaaattattaaa 34995467  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||||||| ||||||| |||||||||||||    
T  34995466 attggaccaaattgaataaaagaaataagttaa-agacgtgtttgagaaagttaagacttatgagaccaaattgaat 34995391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 18573099 - 18572884
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||||||| || ||       || |||||||||||||||||    
T  18573099 agaagaaagtaaataaattatgtgttggtgatacactgtaaaatttgatagacctccgtaatccaacagtgtctttttt-aggggattaaaattatcaaa 18573001  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||||| |||| |||||||||||||||||||||||||| || ||| |||||||||| |||||||||||||||||||||        ||||||||   ||||    
T  18573000 attggcccaatttgaataaaagaaataagttaagggacgtttttaagaaagttaagacttatgggaccaaattgaataaaagaaataagttaacggaccg 18572901  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  18572900 gcagatcaattaagcct 18572884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 32712570 - 32712351
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  32712570 agaagaaagtaaataagttaggtgttggtggtacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 32712471  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||||||||||| || || |||||||||  ||| | |||| |||||||| |||||        |||||||||  ||||    
T  32712470 attggaccaaattgaataaaagaaataagttaagagacgtatttgagaaatgtaagatttataggaccaaactgaataaaagaaataagttaagggaccg 32712371  T
Q  229 gcagatcaattaagcctaaa 248  Q
     |||||||||||| ||||||    
T  32712370 acagatcaattaaacctaaa 32712351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 19383058 - 19383218
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |  |||||||||||||||||       || | |||||||||||||||    
T  19383058 agaagaaagtaaataaattagatgttg-tgatacactataaaatctgatagaccatcgtaatccaacggtctc--tttttagggcattaaaattatcaaa 19383154  T
Q  129 attggaccaaattgaat--aaaagaaataagttaagggatgtgtttgagaaagttaaaacttat 190  Q
    ||| || ||||||||||  |||| ||||||||||||||| ||||||||||||||||| ||||||    
T  19383155 attagatcaaattgaataaaaaaaaaataagttaagggacgtgtttgagaaagttaagacttat 19383218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 29479180 - 29479273
Alignment:
Q  112 ggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||    
T  29479180 ggattgaaattattaaaattggaccaaattgaataaaagaaataagttaaaggacgtgattgagaaagttaaaacttatgggaccagattgaat 29479273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 21094615 - 21094506
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||       || |||||||| |||||||||||||    
T  21094615 aaagtaaataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacggtctctttttttaggggattaaagttatcaaaattgg 21094516  T
Q  134 accaaattga 143  Q
    | ||||||||    
T  21094515 atcaaattga 21094506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 27719941 - 27719839
Alignment:
Q  38 taaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggacca 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||| |||||||||||| ||    
T  27719941 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctc-ttttttaggggattaaaatcatcaaaattggatca 27719843  T
Q  138 aatt 141  Q
    ||||    
T  27719842 aatt 27719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 18574299 - 18574416
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggca 231  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||||||| ||||||||||||        ||||| |||  |||||||    
T  18574299 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatggaaccaaattgaataaaagaaataagtcaagggaccggca 18574398  T
Q  232 gatcaattaagcctaaat 249  Q
    ||||||||||||| ||||    
T  18574399 gatcaattaagccaaaat 18574416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 21095282 - 21095348
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaac 95  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  21095282 agaataaagtaaataaattaggtgttggtgatacactataaaatctggtagacctccgtaatccaac 21095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 18574216 - 18574267
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||    
T  18574216 agaagaaagtaaataaatccggtgttggtggtacactataaaatctgataga 18574267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 29477954 - 29477904
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  29477954 gaagaaagtaaataaatcaggtgttggtgatacaccataaaatctggtaga 29477904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 7628526 - 7628469
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtct 100  Q
    ||||||||||||||||||||||| | ||||||| ||||||||| ||||| ||||||||    
T  7628526 aaattaggtgttggtgatacactgtgaaatctggtagatctccataatctaacggtct 7628469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 7629715 - 7629773
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatcca 93  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||| |||| |||||||||    
T  7629715 aaagtaaa-aaattagatgttggagatacactataaaatctgataaatcttcgtaatcca 7629773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 3000859 - 3000892
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  3000859 ggaccaaattgaataaaagaaataagttaaggga 3000892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 29477810 - 29477778
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||    
T  29477810 gaccaaattgaataaaagaaataagttaaggga 29477778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 13562214 - 13562273
Alignment:
Q  41 ataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtct 100  Q
    ||||||||||||||||||||||||| | | ||||||| ||||||| | ||||||| ||||    
T  13562214 ataaattaggtgttggtgatacactgttagatctgatggatctcctttatccaacagtct 13562273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 13561476 - 13561440
Alignment:
Q  41 ataaattaggtgttggtgatacactataaaatctgat 77  Q
    ||||||||||||||||||||||||||| | |||||||    
T  13561476 ataaattaggtgttggtgatacactattagatctgat 13561440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 161
Target Start/End: Complemental strand, 34995403 - 34995375
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaa 161  Q
    |||||||||||||||||||||||||||||    
T  34995403 gaccaaattgaataaaagaaataagttaa 34995375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 19229976 - 19230194
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||||||||||       || |||||||||||||||||    
T  19229976 agaagaaagtaaataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaa 19230075  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||        ||| |||||  | ||    
T  19230076 attggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggatcg 19230175  T
Q  229 gcagatcaattaagcctaa 247  Q
    |||||||||||||||||||    
T  19230176 gcagatcaattaagcctaa 19230194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 19229053 - 19228840
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||       || |||||||||||||||||    
T  19229053 agaagaaagtaaataaattaggtgttgatgatacactataaaatctaatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaa 19228954  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||||| ||||||||||||||        ||| |||||  ||||    
T  19228953 attggaccaaattgaataaaagaaatcagttaaggaacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccg 19228854  T
Q  229 gcagatcaattaag 242  Q
    ||||||||||||||    
T  19228853 gcagatcaattaag 19228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 12372529 - 12372310
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |        || | |||||||||||||||    
T  12372529 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtatgtttttttagggtattaaaattatcaaa 12372430  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||| |||||||||||||| |||||||||||| || ||||||||||||||||| ||||||| |||||||||||||        |||||||||  ||||    
T  12372429 attggatcaaattgaataaaacaaataagttaagagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaacaaataagttaagggaccg 12372330  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  12372329 gcagatcaattaagcctaaa 12372310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 46 - 244
Target Start/End: Original strand, 9083216 - 9083414
Alignment:
Q  46 ttaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaat 145  Q
    ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||       || ||||||||||||||||||||||||||||||||||    
T  9083216 ttaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctccttttttaggggattaaaattatcaaaattggaccaaattgaat 9083315  T
Q  146 aaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcc 244  Q
    |||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||        | | |||||||||||||||||||||||||||    
T  9083316 aaaataaaaaagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaatgaattaagaaaccggcagatcaattaagcc 9083414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 34 - 245
Target Start/End: Original strand, 39350553 - 39350764
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||       || ||||||||||||| ||||||||    
T  39350553 aaagcaaaaaaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagaggattaaaattataaaaattgg 39350652  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcaga 233  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||        |||||||||  ||||||| |    
T  39350653 accaaattaagtaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcata 39350752  T
Q  234 tcaattaagcct 245  Q
    ||||||||||||    
T  39350753 tcaattaagcct 39350764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 41 - 245
Target Start/End: Complemental strand, 18654500 - 18654295
Alignment:
Q  41 ataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaat 140  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||       |  |||||||||| ||||||||||||||||||    
T  18654500 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctcttttttaatgggattaaaatgatcaaaattggaccaaat 18654401  T
Q  141 tg-aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaatt 239  Q
    |  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||        ||| |||||  |||||||||||||||    
T  18654400 tttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaatt 18654301  T
Q  240 aagcct 245  Q
    ||||||    
T  18654300 aagcct 18654295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 13278134 - 13278310
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||       |  |||||||||||||||||    
T  13278134 agaataaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctctttttctatgggattaaaattatcaaa 13278233  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||| |||||||||  ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  13278234 attggatcaaattgaagtaaaaaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 13278310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 9082181 - 9081977
Alignment:
Q  42 taaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaatt 141  Q
    ||||||||||||| | |||| ||||||||||||||||||  ||||| |||||||||||||       || ||||||||||||||||||||||||||||||    
T  9082181 taaattaggtgttagcgatatactataaaatctgatagacatccgtgatccaacggtctcattttctaggggattaaaattatcaaaattggaccaaatt 9082082  T
Q  142 gaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaa 241  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||        | ||||||| |||||| |||||||||||    
T  9082081 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaatcaaattgaataaaagaaatgagttaaggaaccggtagatcaattaa 9081982  T
Q  242 gccta 246  Q
    |||||    
T  9081981 gccta 9081977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 40 - 246
Target Start/End: Original strand, 18655566 - 18655772
Alignment:
Q  40 aataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaa 139  Q
    |||||||||  ||||||||||||||  ||||||||||||||  | |||||| ||||||||||       || ||||||||||||||||| ||||||||||    
T  18655566 aataaattaattgttggtgatacaccgtaaaatctgatagactttcgtaattcaacggtctctttttttaggggattaaaattatcaaagttggaccaaa 18655665  T
Q  140 ttgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaatt 239  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||        ||||||||| ||||||||||||||||    
T  18655666 ttgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaaggaaccggcagatcaatt 18655765  T
Q  240 aagccta 246  Q
    |||||||    
T  18655766 aagccta 18655772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 39349695 - 39349519
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||| ||||||| |       || ||||||||||||| |||    
T  39349695 agaagaaagtaaataaattaggtgttggtgatccacgataaaatctaatagacctccgtaatcaaacggtcactttttttaggggattaaaattataaaa 39349596  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||| | |||||| ||||||||||||    
T  39349595 attgaaccaaattgagtaaaagaaataagttaaaggacgtgtttgagaaagttaagagttatggaaccaaattgaat 39349519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 39164269 - 39164095
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||| ||||        || |||||||||| ||||||    
T  39164269 agaaaaaagtaaataaattaggtgttggtgatacactataaaatttgataggcctccgtaattcaacagtcttttttttaag-ggattaaaat-atcaaa 39164172  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| ||| |||||||||    
T  39164171 attggaccaaattgaataaaagaaataagttaagggacgtgtttgataaagttaagacttatgagactaaattgaat 39164095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 12373620 - 12373800
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtg----gattaaaattat 124  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||  | ||||||||||||||||          |     ||||||||||||    
T  12373620 agaagaaagtaaataaattaggtgttggtgatacagtgtaaaatctgatagacattcgtaatccaacggtctgtttttttttttttttgattaaaattat 12373719  T
Q  125 caaaattggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  12373720 caaaattggaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaat 12373800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 13277026 - 13276815
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||        |||||| ||||| | |||||||||||||||||||        |  |||||||||||||||||    
T  13277026 agaagaaagtaaataaattaggtgttggtg--------taaaatgtgatacacctccgtaatccaacggtctttttttttaagggattaaaattatcaaa 13276935  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||| ||||||||||||||        |||||||||  ||||    
T  13276934 atttgaccaaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccg 13276835  T
Q  229 gcagatcaattaagcctaaa 248  Q
    ||||||||||||||||||||    
T  13276834 gcagatcaattaagcctaaa 13276815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 6803528 - 6803699
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||| ||||||||        |  |||||||||||||||||    
T  6803528 agaagaaagtaaataaattagatgttggtgatacactataaaatctgataga-ctttgtaatctaacggtctgtttttttaaaggattaaaattatcaaa 6803626  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    ||||||||||||||||||||||||||||||||||  |  ||||||||||| |||| ||||||| |||||||||    
T  6803627 attggaccaaattgaataaaagaaataagttaagaaacatgtttgagaaaattaagacttatgtgaccaaatt 6803699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 4032038 - 4031903
Alignment:
Q  29 agaagaaagtaaata--aattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatca 126  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||       ||||||||||||||||||    
T  4032038 agaagaaagtaaatataaattaggtgttggtgatacactataaaatctggtagacttccgtaattcaacggtctctttttttagtggattaaaattatca 4031939  T
Q  127 aaattggaccaaattgaataaaagaaataagttaag 162  Q
    ||||||||| ||||||||||||||||||||||||||    
T  4031938 aaattggactaaattgaataaaagaaataagttaag 4031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 4032928 - 4033065
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||| ||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||       |||||||||||||||| |||    
T  4032928 agaagaaagtaaataaactaggtgttaatgatacattataaaatctgatagacctccgtaatccaacggtctctttttttagtggattaaaattattaaa 4033027  T
Q  129 attggaccaaattgaataaaagaaataagttaagggat 166  Q
    |||||||||| || ||||||| ||||||||||| ||||    
T  4033028 attggaccaagttaaataaaaaaaataagttaaaggat 4033065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 8447185 - 8447077
Alignment:
Q  136 caaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatc 235  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |||||||||  ||||| |||||    
T  8447185 caaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggtagatc 8447086  T
Q  236 aattaagcc 244  Q
    |||||||||    
T  8447085 aattaagcc 8447077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 6802075 - 6802017
Alignment:
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||| |||||||||    
T  6802075 aataaaagaaataagttaagggacgtgtttgagaaaattaagacttatgagaccaaatt 6802017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 456
Target Start/End: Complemental strand, 30213498 - 30213403
Alignment:
Q  361 gcgggtagcggattcggatccgctattgtattttaacacaaaaattccaaattgaccctactttcaaaactattttcagggcattttggggatttc 456  Q
    ||||| ||||||||  ||||| |||||   ||||||||  ||||| ||| |||||||||| ||| ||||| ||||| |||||||||||||||||||    
T  30213498 gcgggcagcggattttgatccactattaggttttaacaggaaaatcccacattgaccctaattttaaaaccattttaagggcattttggggatttc 30213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 476
Target Start/End: Complemental strand, 40172692 - 40172584
Alignment:
Q  371 gattcggatccgctattgtattttaacacaaaaa---ttccaaattgaccctactttcaaaactattttcagggcattttggggatttcaaattaacctt 467  Q
    ||||| ||||| ||||||||||| |||| |||||   | |||||||||||||| |||  ||||| |||   |||||||||||| ||||| ||||||||||    
T  40172692 gattctgatcccctattgtatttaaacataaaaaagatcccaaattgaccctaatttttaaactgtttcatgggcattttgggaatttcgaattaacctt 40172593  T
Q  468 aacattttc 476  Q
    ||| |||||    
T  40172592 aaccttttc 40172584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 8447129 - 8447096
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  8447129 ggaccaaattgaataaaagaaataagttaaggga 8447096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 42962232 - 42962162
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtct 100  Q
    |||||||||||   ||||||||||||||||||||| || | |||| ||||| |||| | ||||||||||||    
T  42962232 gaagaaagtaatataattaggtgttggtgatacaccattagatcttatagacctcctttatccaacggtct 42962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 3944702 - 3944750
Alignment:
Q  114 attaaaattatcaaaattggaccaaattgaataaaagaaataagttaag 162  Q
    ||||||||||| ||||||||| |||||| |||||||  |||||||||||    
T  3944702 attaaaattattaaaattggatcaaattaaataaaaataataagttaag 3944750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 161
Target Start/End: Original strand, 35952503 - 35952531
Alignment:
Q  133 gaccaaattgaataaaagaaataagttaa 161  Q
    |||||||||||||||||||||||||||||    
T  35952503 gaccaaattgaataaaagaaataagttaa 35952531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 34 - 246
Target Start/End: Original strand, 2934 - 3147
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagt-ggattaaaattatcaaaattg 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||          | |||||||||||||||||||||    
T  2934 aaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttggattaaaattatcaaaattg 3033  T
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcag 232  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||        |||||||||  || |||||    
T  3034 gaccaaattgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggactggcag 3133  T
Q  233 atcaattaagccta 246  Q
    ||||||||||||||    
T  3134 atcaattaagccta 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 1983 - 1848
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| |||||  | ||||||| ||||||||          |||||||||||||| |||    
T  1983 agaagaaagtaaataaattaggtgttggtgatacactggaaaatctaatagacattcgtaatctaacggtctatattttttttggattaaaattat-aaa 1885  T
Q  129 attggaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||||||    
T  1884 attggaccaaattgaataaaagaaataagttaaggga 1848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 34 - 247
Target Start/End: Original strand, 27892244 - 27892457
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||          | |||||||||||||||||||||    
T  27892244 aaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttgattaaaattatcaaaattgg 27892343  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcaga 233  Q
    | |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||        |||||||||  |||||||||    
T  27892344 atcaaattgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcaga 27892443  T
Q  234 tcaattaagcctaa 247  Q
    ||||||||||||||    
T  27892444 tcaattaagcctaa 27892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 16602940 - 16602764
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||           |||||||||||||||||    
T  16602940 agaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacatccgtaatccaacggtcttttttttttagggattaaaattatcaaa 16602841  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  16602840 attggaccaatttaaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 16602764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 27891321 - 27891104
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||  | ||||||| ||||||||          |  |||||||||||||||    
T  27891321 agaagaaagtaaataaattaggtgttggtgatacactggaaaatctgatagacattcgtaatctaacggtctgttttttttttttattaaaattatcaaa 27891222  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||||||||||        |||||||||  ||||    
T  27891221 attgaaccaaaatgaataaaagaaataagttaagggacgtgtttgagaaagttaagacctatgagaccaaattgaataaaagaaataagttaagggaccg 27891122  T
Q  229 gcagatcaattaagccta 246  Q
    ||||||||||||||||||    
T  27891121 gcagatcaattaagccta 27891104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 38243858 - 38244034
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||| ||| | ||  |||||||||| || ||       ||  ||||||||||||||||    
T  38243858 agaagaaagtaaataaatttggtgttggtaatacactgtaaaatcttatacacctttgtaatccaacagtatctttttttaggagattaaaattatcaaa 38243957  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||    
T  38243958 attggaccaaattgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaat 38244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 23833165 - 23833007
Alignment:
Q  46 ttaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaat 145  Q
    |||||||||| ||||||||||||||||||  |||| |||||||||||||||||||        || |||||||||||||||||||||||| |||||||||    
T  23833165 ttaggtgttgatgatacactataaaatcttctagacctccgtaatccaacggtcttcttttttaggggattaaaattatcaaaattggactaaattgaat 23833066  T
Q  146 aaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||| ||| ||||||| ||| ||||||||||||||||| |||||||||||||||| ||||    
T  23833065 aaaataaaaaagttaa-ggacgtgtttgagaaagttaagacttatgggaccaaatggaat 23833007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 67 - 242
Target Start/End: Complemental strand, 26388395 - 26388220
Alignment:
Q  67 taaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggat 166  Q
    |||||||||||||| |||||||||| ||||||||        |  ||||||||||||||||||||| | |||||| ||||||||||||||||||| |||     
T  26388395 taaaatctgatagacctccgtaatcaaacggtctttttttatatgggattaaaattatcaaaattgaatcaaattaaataaaagaaataagttaaaggac 26388296  T
Q  167 gtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaag 242  Q
    ||||||||||||||||| ||||||| || ||||||||||        |||||||||| |||| |||||||||||||    
T  26388295 gtgtttgagaaagttaagacttatgagatcaaattgaataaaaaaaataagttaagagaccgacagatcaattaag 26388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 38243095 - 38242943
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||   ||  ||||||||||||||||       ||  ||||||||||||||||    
T  38243095 agaagaaagtaaataaatttggtgttggtgatacattataaaatcttata---ctttgtaatccaacggtctctttttttaggagattaaaattatcaaa 38242999  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaa 184  Q
    |||||| |||||| |||||||||||||||||||| ||  ||||||| |||||||||    
T  38242998 attggatcaaattaaataaaagaaataagttaagagacatgtttgaaaaagttaaa 38242943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 16604195 - 16604308
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggca 231  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||| |||| |||||||||||||||||||||        |||||||||  ||||| |    
T  16604195 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaacttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggta 16604294  T
Q  232 gatcaattaagcct 245  Q
    ||||||||||||||    
T  16604295 gatcaattaagcct 16604308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 23833898 - 23833991
Alignment:
Q  154 taagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaagcctaa 247  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||        |||||||||  |||||||||||||||||||||||    
T  23833898 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaa 23833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 43814629 - 43814560
Alignment:
Q  136 caaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||| ||||||| ||| |||||||||    
T  43814629 caaattgaataaaagaaataagttaaaggacgtatttgagaaagttaagacttatgagacgaaattgaat 43814560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 5033673 - 5033602
Alignment:
Q  30 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||  | |||||||| ||||    
T  5033673 gaagaaagtaaataaattaaatgttggtgatacactataaaatctggtagatctctcttatccaacgatctc 5033602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 5033566 - 5033517
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  5033566 agttaagggatgtatttgagaaagttaaaagttataggaccaaattgaat 5033517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 15496133 - 15496084
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaat 205  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  15496133 agttaagggacgtgtttgtgaaagttaagacttatgggaccaaattgaat 15496084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 5034846 - 5034891
Alignment:
Q  156 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaatt 201  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||    
T  5034846 agttaagggatgtgtttgagaaagttaaaagttatagaaccaaatt 5034891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 5034743 - 5034810
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    ||||||||||||| | |||||||||||||||| ||||||||| |||| |||  | |||||||| ||||    
T  5034743 aaagtaaataaatcaagtgttggtgatacactctaaaatctgttagacctctcttatccaacgatctc 5034810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 12365929 - 12365996
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctc 101  Q
    |||| |||||||| |||||||||||||||||  | | ||||||||||||||  | |||||||||||||    
T  12365929 aaagaaaataaatcaggtgttggtgatacacagttatatctgatagatctcatttatccaacggtctc 12365996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 16604112 - 16604163
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgataga 80  Q
    ||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  16604112 agaagaaagtaaataaatccagtgttggtggtacactataaaatctggtaga 16604163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 5033530 - 5033501
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaa 161  Q
    ||||||||||||||||||||||||||||||    
T  5033530 ggaccaaattgaataaaagaaataagttaa 5033501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 16602777 - 16602744
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  16602777 ggaccaaattgaataaaagaaataaattaaggga 16602744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 19577392 - 19577425
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||| |||||||||||||||||||||    
T  19577392 ggaccaaattgactaaaagaaataagttaaggga 19577425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 23833940 - 23833969
Alignment:
Q  136 caaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||    
T  23833940 caaattgaataaaagaaataagttaaggga 23833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 436
Target Start/End: Complemental strand, 43632040 - 43631967
Alignment:
Q  364 ggtagcggattcggatccgctattgtattttaaca-caaaaattccaaattgaccctactttcaaaactatttt 436  Q
    |||||||||||| |||||||||||| |||||||||  ||||||  ||| ||||||||| ||| ||||| |||||    
T  43632040 ggtagcggattctgatccgctattggattttaacaggaaaaatcgcaagttgaccctaattttaaaaccatttt 43631967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 43814568 - 43814540
Alignment:
Q  137 aaattgaataaaagaaataagttaaggga 165  Q
    |||||||||||||||||||||||||||||    
T  43814568 aaattgaataaaagaaataagttaaggga 43814540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 43 - 244
Target Start/End: Complemental strand, 31234 - 31033
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        || ||||||||||||| |||| ||||||||||||    
T  31234 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 31135  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaag 242  Q
    | ||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||  ||||||||||||||||||    
T  31134 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31035  T
Q  243 cc 244  Q
    ||    
T  31034 cc 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 43 - 244
Target Start/End: Original strand, 35202 - 35403
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||        || ||||||||||||| |||||||||||||||||    
T  35202 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 35301  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaag 242  Q
    | ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||        |||||||||  |||| |||||||||||||    
T  35302 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 35401  T
Q  243 cc 244  Q
    ||    
T  35402 cc 35403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 43 - 244
Target Start/End: Complemental strand, 79610 - 79409
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||        || ||||||||||||| |||||||||||||||||    
T  79610 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 79511  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaag 242  Q
    | ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||        |||||||||  |||| |||||||||||||    
T  79510 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 79411  T
Q  243 cc 244  Q
    ||    
T  79410 cc 79409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 43 - 244
Target Start/End: Original strand, 83578 - 83779
Alignment:
Q  43 aaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggaccaaattg 142  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        || ||||||||||||| |||| ||||||||||||    
T  83578 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 83677  T
Q  143 aataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaattaag 242  Q
    | ||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||  ||||||||||||||||||    
T  83678 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 83777  T
Q  243 cc 244  Q
    ||    
T  83778 cc 83779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 1504 - 1720
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaa 128  Q
    ||||||||||||| ||||||||||||||| ||||||  |||||||||||||| |||  ||||||||||||||        |  |||||||||||||||||    
T  1504 agaagaaagtaaaaaaattaggtgttggttatacaccgtaaaatctgatagacctctataatccaacggtctgtttttttaagggattaaaattatcaaa 1603  T
Q  129 attggaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccg 228  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||||||||||||||| |||||||| ||||||||||||        |||||||||  ||||    
T  1604 attggaccaaattgaataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccg 1703  T
Q  229 gcagatcaattaagcct 245  Q
    |||||||||||||||||    
T  1704 gcagatcaattaagcct 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 246
Target Start/End: Complemental strand, 343 - 132
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattgg 133  Q
    |||||||| |||||||||||||||||||| || |||||||||||||| ||| ||||||||||||||||       |  | |||||||||||||||||| |    
T  343 aaagtaaa-aaattaggtgttggtgatacgctgtaaaatctgatagacctctgtaatccaacggtctctttttttaaggaattaaaattatcaaaatttg 245  T
Q  134 accaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcaga 233  Q
    ||||||||||||||| ||||||| |||| ||| ||||||||||||||||| |||||||||| ||||||||||        |||||||||  || ||||||    
T  244 accaaattgaataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggactggcaga 145  T
Q  234 tcaattaagccta 246  Q
    |||||||||||||    
T  144 tcaattaagccta 132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 25252 - 25463
Alignment:
Q  34 aaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtc-tcnnnnnnnagtggattaaaattatcaaaattg 132  Q
    |||||||||||||||||||||| | |||||||||||||| ||||| | |||||||||||||| ||| ||       |   ||||||||||||||||||||    
T  25252 aaagtaaataaattaggtgttgataatacactataaaatgtgataaacctccgtaatccaactgtcctcttgttttaaatgattaaaattatcaaaattg 25351  T
Q  133 gaccaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcag 232  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||  | ||||||    
T  25352 gaccaaatttaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggagcggcag 25451  T
Q  233 atcaattaagcc 244  Q
    ||||||||||||    
T  25452 atcaattaagcc 25463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 64; Significance: 9e-28; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 138 - 249
Target Start/End: Complemental strand, 104407 - 104296
Alignment:
Q  138 aattgaataaaagaaataagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaatnnnnnnnntaagttaagaaaccggcagatcaa 237  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||        |||||||||  |||| || |||||    
T  104407 aattgaataaaagaaataagttaagggacgtgtttgagaatgttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccgtcaaatcaa 104308  T
Q  238 ttaagcctaaat 249  Q
    ||||||||||||    
T  104307 ttaagcctaaat 104296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 104466 - 104405
Alignment:
Q  29 agaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctccgtaat 90  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  104466 agaagaaagtaaataaattagatgttggtgatacactataaaatctgatagacctccgtaat 104405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 104353 - 104320
Alignment:
Q  132 ggaccaaattgaataaaagaaataagttaaggga 165  Q
    ||||||||||||||||||||||||||||||||||    
T  104353 ggaccaaattgaataaaagaaataagttaaggga 104320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 9363 - 9261
Alignment:
Q  38 taaataaattaggtgttggtgatacactataaaatctgatagatctccgtaatccaacggtctcnnnnnnnagtggattaaaattatcaaaattggacca 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       || |||||||||| |||||||||||| ||    
T  9363 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctc-ttttttaggggattaaaatcatcaaaattggatca 9265  T
Q  138 aatt 141  Q
    ||||    
T  9264 aatt 9261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 29122 - 29167
Alignment:
Q  39 aaataaattaggtgttggtgatacactataaaatctgatagatctc 84  Q
    |||||||||||||||| |||||||||| | | ||||||||||||||    
T  29122 aaataaattaggtgttagtgatacactcttagatctgatagatctc 29167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1594 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1594
Description:

Target: scaffold1594; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 260 - 344
Alignment:
Q  388 gtattttaacacaaaaattccaaattgaccctactttcaaaactattttcagggcattttggggatttcaaattaaccttaacat 472  Q
    ||||||||||| |||||| | |||||||||||  ||| ||||| ||||  |||| ||||| |  ||||||||||||||| |||||    
T  260 gtattttaacaaaaaaatcctaaattgaccctgattttaaaaccatttcgagggtattttagatatttcaaattaacctcaacat 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1549 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1549
Description:

Target: scaffold1549; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 472
Target Start/End: Complemental strand, 1336 - 1252
Alignment:
Q  388 gtattttaacacaaaaattccaaattgaccctactttcaaaactattttcagggcattttggggatttcaaattaaccttaacat 472  Q
    ||||||||||| |||||| | |||||||||||  ||| ||||| ||||  |||| ||||| |  ||||||||||||||| |||||    
T  1336 gtattttaacaaaaaaatcctaaattgaccctgattttaaaaccatttcgagggtattttagatatttcaaattaacctcaacat 1252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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