View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1129_low_35 (Length: 355)
Name: NF1129_low_35
Description: NF1129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1129_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 85 - 260
Target Start/End: Complemental strand, 6390751 - 6390576
Alignment:
| Q |
85 |
atccttagccacacaatgttatcaagattttatattattccttgctaatcaaacaaccttgaaaatcactcctttgattagttagtccatgtgaacttag |
184 |
Q |
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| T |
6390751 |
atccttaaccacacaatgttatcaagattttatattattccttgctaatcaaacaaccttgaaaatcactcctttgattagttagtccatgtgaacttag |
6390652 |
T |
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| Q |
185 |
acattgttgtacctttaattgtataccttcataacatgcttcccacgaggtggggcttcaatgcatgatattggtg |
260 |
Q |
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| T |
6390651 |
acattgttgtacctttaattgtataccttcataacatgcttcccacgaggtggggcttcaatgcatgatattggtg |
6390576 |
T |
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