View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1129_low_55 (Length: 293)
Name: NF1129_low_55
Description: NF1129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1129_low_55 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 66 - 244
Target Start/End: Original strand, 403704 - 403882
Alignment:
| Q |
66 |
ggattacctcgccggcggcgattcggttaacgactgattccgctaggcgttggattttgggtggcgactccatcttttacggtgtttgttgggttttgga |
165 |
Q |
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| T |
403704 |
ggattacctcgccggcggcgattcggttaacgaccgattccgctaggcgttgaattttgggtggcgattccatcttttacggtgtttgttgggttttgga |
403803 |
T |
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| Q |
166 |
gtgacgagaaatggaatttgttcgcgggagtatgaatgttgtactgggcgggagagagagaaggaatccatatcagtat |
244 |
Q |
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| T |
403804 |
gtgacgagaaatggaatttgttcgcgggagtatgaatgttgtactgggcgggagagagagaaggaatccatatcagtat |
403882 |
T |
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