View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11300_low_13 (Length: 270)
Name: NF11300_low_13
Description: NF11300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11300_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 53829921 - 53830161
Alignment:
| Q |
11 |
gagatggacatcaaatctcaacgatggagccagtcacacatggcgcttatggtggtggaatgtatggcacagaaaaagggcaaccagaaaaacaaaccaa |
110 |
Q |
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| T |
53829921 |
gagaaggacctcaaatctcaacgatggagccagtcacacatggcgcttatggtggtggaatgtatggcacagaaaaagggcaaccagaaaaacaaaccaa |
53830020 |
T |
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| Q |
111 |
acaaccagcaagtgagactcaaagtgctgatggacctgttgataaggacactatcaagcccaaacataatcctcctccttcatctggggatcgtgatata |
210 |
Q |
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| T |
53830021 |
acaaccagcaagtgagactcaaagtgctgatggtcctgttgataaggacactatcaagcccaaacataatcctcctccttcatctggggatcgtgatata |
53830120 |
T |
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| Q |
211 |
gacatcactggccagtcctatatccagtaataacaacatat |
251 |
Q |
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| T |
53830121 |
gacatcactggccagtcctatatccagtaataacaacatat |
53830161 |
T |
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