View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11301_high_48 (Length: 227)
Name: NF11301_high_48
Description: NF11301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11301_high_48 |
 | |
|
| [»] scaffold0060 (1 HSPs) |
| | |
|
| [»] scaffold0330 (1 HSPs) |
| | |
|
| [»] scaffold0076 (1 HSPs) |
| | |
|
| [»] scaffold1391 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 22707314 - 22707402
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22707314 |
tagcttatagcttgttggattagtttataagctcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
22707402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 24119315 - 24119229
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
24119315 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
24119229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 13756392 - 13756308
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
13756392 |
ttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatagtg |
13756308 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 25023531 - 25023445
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | |||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
25023531 |
tagcttatagcttgttggattagcttataagcttgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
25023445 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12130502 - 12130590
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || |||||||||||||||| |||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
12130502 |
gttagcttatagcttgttggattagcttataaatttgttagatgaaaacgtggcgtgtttggtaacaaacttttttcatgagcttatag |
12130590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 20645681 - 20645767
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
20645681 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaatgtgacgtgtttggtaacaagctttttttatgagcttatag |
20645767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 20992337 - 20992255
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
20992337 |
ttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
20992255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 21860257 - 21860343
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| ||||||||| |||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
21860257 |
tagcttatagcttgttggattagcttataagctcgttagacgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttatag |
21860343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 21459045 - 21459131
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| ||| |||||||||||| |||||||||||| |
|
|
| T |
21459045 |
tagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttgataacaagcttttcttatgagcttatag |
21459131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 21778158 - 21778076
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||| ||||||||| |||||||| |||||||||||||| || ||| ||||||||||||||||| || |||||||||| |
|
|
| T |
21778158 |
ttatagcctgttggattaacttataagctcgttagatgaaaatctggtgtgtttggtaacaagcttttttcacgagcttatag |
21778076 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 6834119 - 6834037
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||| |||||| | | ||||||||| | ||| ||||||||||||| ||| |||||||||| ||||| |||||||||||| |
|
|
| T |
6834119 |
cttatagtttgttgaactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaaacttttctcatgagcttata |
6834037 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 32986923 - 32986874
Alignment:
| Q |
40 |
agatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
32986923 |
agatgaaaacgtggcgtgtttgataacaagcttttttcatgagcttatag |
32986874 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 29)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 284839 - 284929
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
284839 |
gttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatagtg |
284929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 631038 - 630948
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
631038 |
gttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatagtg |
630948 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 816850 - 816760
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
816850 |
gttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatagtg |
816760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22215132 - 22215219
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
22215132 |
gttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttata |
22215219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 43800845 - 43800759
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
43800845 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
43800759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20697584 - 20697497
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
20697584 |
gttagcttatagcttgttggattagcttataagctcgttagatgaaaacataacgtgtttggtaacaagcttttttcatgagcttata |
20697497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 38747033 - 38746947
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
38747033 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtggttggtaacaagcttttttcatgaacttatag |
38746947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36859249 - 36859337
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||| ||||| ||||||||||||| |
|
|
| T |
36859249 |
gttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacctatttggtaacaagtttttttcatgagcttatag |
36859337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 25100291 - 25100205
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| | || ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
25100291 |
tagcttatagcttgttagcttagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
25100205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 35160346 - 35160260
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||| |
|
|
| T |
35160346 |
tagcttatagcttattggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcaatagcttatag |
35160260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 14911788 - 14911874
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||||||||| ||| |||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
14911788 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttggtaacaagtttttttcatgagcttatag |
14911874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 35057377 - 35057291
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||| |||| |||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
35057377 |
tagcttatagcttgttagattagcttataagctcgttggatgcaaacgtgacgtgtttggtaacaagcttttctcatgagcttatag |
35057291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5574623 - 5574710
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||||| |||||| ||| |||||||| |||||||||||||||||| |||| ||||||||||| ||||| |||||||||||| |
|
|
| T |
5574623 |
gttagcttatagtttgttgaattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttata |
5574710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 40529524 - 40529610
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| | || ||||||||| | |||||||||||| ||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
40529524 |
tagcttatagcttgtttgtttagcttataagcttgttagatgaaaatgtgtcgtgtttggtaacaagcttttttcatgagcttatag |
40529610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 2773659 - 2773574
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||| | ||||||||| | ||| ||||||||||||||||| |||||||||||||||| || ||||||||| |
|
|
| T |
2773659 |
tagcttatagcttgttggactagcttataagcttgttggatgaaaacgtgacgtgcttggtaacaagcttttctcacgagcttata |
2773574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 5838282 - 5838363
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttat |
87 |
Q |
| |
|
|||||||||||||||||| ||||||||| | |||||||||||| ||| | || ||||||||||||||||| ||||||||||| |
|
|
| T |
5838282 |
cttatagcttgttggattagcttataagcttgttagatgaaaatgtggcatgtttggtaacaagcttttttcatgagcttat |
5838363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 41355634 - 41355722
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| ||| ||||||||||||| ||| |||||||||| ||||| ||||||||||||||| |
|
|
| T |
41355634 |
tagcttatagctccttggattagcttataagtttgttggatgaaaacgtgatgtgtttggtaacaaacttttctcatgagcttatagtg |
41355722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 17121842 - 17121924
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||| ||||| ||||||| |
|
|
| T |
17121842 |
ttataggttgttggattaacttataagttcgttagatgaaaacgtagcgtgtttggtaacaaacttttttcatgatcttatag |
17121924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 39733749 - 39733818
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctt |
72 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
39733749 |
tagcttataccttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaacaagctt |
39733818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 16785640 - 16785724
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttat |
87 |
Q |
| |
|
||||||||| ||| || ||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
16785640 |
tagcttataacttattaaattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttatcatgagcttat |
16785724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 3512494 - 3512580
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||| |||| ||| ||||||||| |
|
|
| T |
3512494 |
tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagtttttctcattagcttatag |
3512580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 21266940 - 21266855
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||| |||||||| |||| ||||| ||| || || ||||||||||||||||| |||||||||||||||| || ||||||||| |
|
|
| T |
21266940 |
tagcttaaagcttgttagattagcttagaagctcattggatgaaaacgtgacgtgtttggtaacaagcttttctcacgagcttata |
21266855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 16785863 - 16785922
Alignment:
| Q |
28 |
tataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttat |
87 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
16785863 |
tataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgagcttat |
16785922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 24804563 - 24804477
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||| || |||||| | ||| |||||||| |||| ||| |||||||||||||||| ||||| ||||||| |
|
|
| T |
24804563 |
tagcttatagcttcttggattagcctataagcttgttggatgaaaatgtgatgtgtttggtaacaagcttttctcatgaccttatag |
24804477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 35398060 - 35398011
Alignment:
| Q |
26 |
cttataagttcgttagatgaaaacgtgacgtgattggtaacaagcttttt |
75 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
35398060 |
cttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttt |
35398011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 25099436 - 25099488
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacg |
55 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||| |
|
|
| T |
25099436 |
tagcttataacttgttggattagcttataagctcgttagatgaaaacatgacg |
25099488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16786604 - 16786521
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| ||||||| ||||||||| | ||| |||||||||||| ||| |||||||||| ||||| |||||||||||| |
|
|
| T |
16786604 |
cttatagcttcttggattagcttataagcttgttgaatgaaaacgtgatgtgtttggtaacaaacttttcttatgagcttatag |
16786521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 34618766 - 34618702
Alignment:
| Q |
27 |
ttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||||| ||||| |||||||| |||||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
34618766 |
ttataagctcgttggatgaaaatgtgacgtgtttaataacaagcttttctcatgagcttatagtg |
34618702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 7303365 - 7303426
Alignment:
| Q |
27 |
ttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||| ||| |||||||| |||| ||| |||||| ||||||||| |||||||||||| |
|
|
| T |
7303365 |
ttataagtttgttggatgaaaatgtgatgtgtttggtaccaagcttttctcatgagcttata |
7303426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 30)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 6789690 - 6789604
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
6789690 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
6789604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 15498668 - 15498754
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
15498668 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
15498754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 16218384 - 16218298
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
16218384 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
16218298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 24171388 - 24171474
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
24171388 |
tagcttatagcttgttggattagcttataagctcgttagatgaaatcgtgacgtgtttggtaacaagcttttttcatgagcttatag |
24171474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 29525397 - 29525311
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
29525397 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
29525311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 37530821 - 37530735
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
37530821 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
37530735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 41734345 - 41734259
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
41734345 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
41734259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 42709334 - 42709420
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
42709334 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
42709420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 12280804 - 12280890
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
12280804 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
12280890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 13359557 - 13359471
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||| |||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
13359557 |
tagcatatagcttgttggattagcttataagcttgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
13359471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 27813077 - 27812991
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
27813077 |
tagcttatagcttgttgaattagtttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
27812991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 36761085 - 36761171
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
36761085 |
tagcttataggttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
36761171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 17645329 - 17645414
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
17645329 |
tagcttatagcttgttagattagcttataagttcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgagcttata |
17645414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 34590002 - 34589917
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||| || |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
34590002 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacatggcgtgtttggtaacaagcttttttcatgagcttata |
34589917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17540282 - 17540370
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
17540282 |
gttagcttatagcttgttggattagcttataagctcgttggattaaaacgtgacgtgtttggtaacaaacttttttcatgagcttatag |
17540370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 76437 - 76523
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| | |||||||||| |
|
|
| T |
76437 |
tagcttatagctttttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcccgagcttatag |
76523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 10815086 - 10815172
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||||||||| ||||||| || |||||||||||||| ||||||||||||| |
|
|
| T |
10815086 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaatatgacgtgtttagtaacaagcttttttcatgagcttatag |
10815172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 11784269 - 11784184
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||| || |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
11784269 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaatatgtcgtggttggtaacaagcttttt-catgagcttatag |
11784184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 12953908 - 12953822
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||| |||||||||| ||||||||| |||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
12953908 |
tagcttataatttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttgataacaagcttttttcatgagcttatag |
12953822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 23590666 - 23590748
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
23590666 |
ttataacttgttggattagcttataaactcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
23590748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 25881530 - 25881616
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
25881530 |
tagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaaacttttctcatgagcttatag |
25881616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 7615075 - 7614992
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||||||| || |||| ||||||||||||||||| || ||||||||| |
|
|
| T |
7615075 |
cttatagcttgttggattagcttataagctcgttagatgaaaacatggcgtgtttggtaacaagcttttttcacaagcttatag |
7614992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 5050178 - 5050092
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||| | ||||| |||||||||||| |
|
|
| T |
5050178 |
tagcttatagcttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacgaacttttcttatgagcttatag |
5050092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 35766582 - 35766668
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| | ||| ||||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
35766582 |
tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
35766668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 12939958 - 12939872
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||| |||||||||| ||||||||| ||||||||||||||| || |||| ||| ||||||| ||||| ||||||||||||| |
|
|
| T |
12939958 |
tagcttataatttgttggattagcttataagctcgttagatgaaaacctggcgtgtttgataacaagtttttttcatgagcttatag |
12939872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 35638787 - 35638873
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| |||||||| |||||||||||||| ||| |||| ||| ||||||||||||| || |||||||||| |
|
|
| T |
35638787 |
tagcttatagtttgttggattaacttataagctcgttagatgaaaatgtggcgtgtttgataacaagcttttttcacgagcttatag |
35638873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42422834 - 42422918
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattgg--taacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||| |||||||| |||||||||||||||||| |||| |||| ||||||||||||| ||||||||||||| |
|
|
| T |
42422834 |
ttatagcttgttgaattaacttataagctcgttagatgaaaacgtggcgtgtttggtataacaagcttttttcatgagcttatag |
42422918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 7157574 - 7157488
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||| | |||||||| | ||| ||||||||||||| | | |||||||||||||||| || |||||||||| |
|
|
| T |
7157574 |
tagcttatagcttgttggactaacttataagcttgttggatgaaaacgtgatgcgtttggtaacaagcttttctcacgagcttatag |
7157488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 3703479 - 3703560
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||||| ||| ||||||||| | || ||||||||||||||||| ||| ||||||| |||| |||||||||||| |
|
|
| T |
3703479 |
ttatagcttgttatattagcttataagcttattggatgaaaacgtgacgtgtttgataacaagtttttctcatgagcttata |
3703560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 5102779 - 5102694
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||| ||||| |||||||| | ||||||||||| ||| ||| ||||| ||| ||| ||| |||||| ||||| |||||||||||| |
|
|
| T |
5102779 |
tagcgtatagattgttggactagcttataagtttgttggatcaaaacatgatgtgtttgataacaaacttttctcatgagcttata |
5102694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 31)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 6238211 - 6238296
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
6238211 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttata |
6238296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 33984111 - 33984199
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
33984111 |
tagcttatagcttgttgaattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatagtg |
33984199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47633922 - 47633835
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| |
|
|
| T |
47633922 |
gttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagtttata |
47633835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 2943728 - 2943642
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
2943728 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
2943642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 19801939 - 19801853
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
19801939 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
19801853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 49335267 - 49335181
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
49335267 |
tagcttatagcttgttggattagcttataagttcgttagaagaaaacgtgacgtgtttggtaataagcttttttcatgagcttatag |
49335181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19800947 - 19801035
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
19800947 |
gttagcttatagcttgttggattagcttataagctcgttacatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
19801035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 39840271 - 39840185
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
39840271 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgaacttatag |
39840185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 43374618 - 43374704
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |
|
|
| T |
43374618 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagtttatag |
43374704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 53284030 - 53284112
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagctt |
85 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
53284030 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagctt |
53284112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 20356777 - 20356691
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||| ||||| ||||||||||||| |
|
|
| T |
20356777 |
tagcttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggcaacaagtttttttcatgagcttatag |
20356691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 37114510 - 37114424
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
37114510 |
tagcttatagcttgttggattagcttataagctcgttatatgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttatag |
37114424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 44448473 - 44448555
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
44448473 |
cttatagcttgttggattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttata |
44448555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 45561392 - 45561306
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| || ||||||||||||| ||||||||||||| |
|
|
| T |
45561392 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttaataacaagcttttttcatgagcttatag |
45561306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 55001820 - 55001734
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
55001820 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaacaggcttttttcatgagcttatag |
55001734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 54683620 - 54683705
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||| |||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
54683620 |
tagcttataacttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgagcttata |
54683705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 32012570 - 32012656
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||| |||||||||||| ||| |||| || |||||||||||||| |||||||| |||| |
|
|
| T |
32012570 |
tagcttatagcttgttagattagcttataagtttgttagatgaaaatgtggcgtgtttcgtaacaagcttttttcatgagctcatag |
32012656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 37498229 - 37498311
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||| |||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
37498229 |
cttatagtttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaaacttttctcatgagcttata |
37498311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 44526014 - 44525944
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagcttt |
73 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
44526014 |
tagcttatagtttgttggattagcttataagttcgttaaatgaaaacgtgatgtgtttggtaacaagcttt |
44525944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6287858 - 6287945
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||| || |||| ||||||||||| || ||||||||||||| ||| |||||||||| |||||| |||||||||||| |
|
|
| T |
6287858 |
gttagcttatagcttcttagattagcttataagtttattggatgaaaacgtgatgtgtttggtaacaaacttttttcatgagcttata |
6287945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 28778583 - 28778650
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttt |
74 |
Q |
| |
|
|||||||||||| |||| ||||||||||| || ||||||||||||||||| |||||||||||||||| |
|
|
| T |
28778583 |
ttatagcttgttagattaacttataagttcattggatgaaaacgtgacgtgtttggtaacaagctttt |
28778650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30653369 - 30653282
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||| |||||||||| | ||||||||| | ||| ||||||||| ||| ||| ||||||||||||||||| || ||||||||| |
|
|
| T |
30653369 |
gttagcttatggcttgttggactagcttataagcttgttggatgaaaacatgatgtgtttggtaacaagcttttttcacgagcttata |
30653282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 36181443 - 36181360
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||| ||||| ||| |||||||| |||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
36181443 |
cttatagtttgttaaattagcttataaactcgttagatgaaaacgtgtcgtgtttggtaataagcttttttcatgagcttatag |
36181360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 53431653 - 53431739
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| ||| ||||||||| ||| ||| |||||||||| ||||| || |||||||||| |
|
|
| T |
53431653 |
tagcttatagcttgttggactagcttataagtttgttggatgaaaacatgatgtgtttggtaacaaacttttctcacgagcttatag |
53431739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 25687013 - 25687095
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| || ||||||| ||||||||| | ||| |||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
25687013 |
ttatagttttttggattagcttataagcttgttgtatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
25687095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 24152699 - 24152785
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||| | | ||||||| | ||| ||||||||||||| ||| ||||||| ||| |||| ||| ||||||||| |
|
|
| T |
24152699 |
tagcttatagcttgttggactagtttataagctagttggatgaaaacgtgatgtgtttggtaataagtttttctcataagcttatag |
24152785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 51941126 - 51941211
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||| | |||||||||| ||| ||| ||||| ||| || ||||||||||| |||| |||||||||||| |
|
|
| T |
51941126 |
tagcttatagcttgttggactaacttataagtttgttggatcaaaacatgatatgtttggtaacaagtttttctcatgagcttata |
51941211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 40685825 - 40685887
Alignment:
| Q |
27 |
ttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||||| ||| ||| |||||||||| |||| ||||||||||||| |
|
|
| T |
40685825 |
ttataagttcgttggatgaaaacatgatgtgtttggtaacaaactttgctcatgagcttatag |
40685887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 21234648 - 21234600
Alignment:
| Q |
41 |
gatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||| ||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
21234648 |
gatgagaacgtgatgtgtttggtaacaagcttttatcatgagcttatag |
21234600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40674768 - 40674856
Alignment:
| Q |
1 |
gttagcttata-gcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||| |||||||||| | ||||||||| | || ||||||||| ||| ||| ||||||| ||||||||| || || |||||| |
|
|
| T |
40674768 |
gttagcttataagcttgttggactagcttataagcttattggatgaaaacatgatgtgtttggtaataagcttttttcacgatcttata |
40674856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 55496115 - 55496067
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaac |
49 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| | ||| ||||||||| |
|
|
| T |
55496115 |
gttagcttatagcttgttggactagcttataagcttgttggatgaaaac |
55496067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 46315764 - 46315679
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
46315764 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttata |
46315679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 39325634 - 39325720
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
39325634 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
39325720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 30358097 - 30358182
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
30358097 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttata |
30358182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 38815625 - 38815539
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
38815625 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttggtaacaagcttttttcatgagcttatag |
38815539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 50586255 - 50586169
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
50586255 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgaccttatag |
50586169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 38624094 - 38624177
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
38624094 |
cttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
38624177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 27747630 - 27747716
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||||| ||||| ||||||| |
|
|
| T |
27747630 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttatcatgaacttatag |
27747716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 28955628 - 28955546
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||| |||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |
|
|
| T |
28955628 |
cttatagcttgttagattagcttataagctcgttagatgaaaacgtgatgtgtttggtaacaagcttttttcatgagcttata |
28955546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36739574 - 36739662
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
36739574 |
gttagtttatagtttgttggattaacttataagctcgttagatgaaaacgtgacgtgtttggtaacgagcttttttcatgagcttatag |
36739662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 11823611 - 11823693
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||||||||| |||| | ||||||||| ||||| ||||||||||||| |
|
|
| T |
11823611 |
ttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgttcggtaacaagtttttttcatgagcttatag |
11823693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 45900196 - 45900278
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||| |||||||||| ||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
45900196 |
ttatagcttgttggattagcttataagctcgttagaagaaaacgtgatgtgtttggtaacaaacttttttcatgagcttatag |
45900278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 47326660 - 47326574
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||||||||||||| ||| |||||||||| || ||| ||||||||||||| |
|
|
| T |
47326660 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaacaaactattttcatgagcttatag |
47326574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 1190215 - 1190134
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||| ||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||| ||||| |||||||||||| |
|
|
| T |
1190215 |
ttataacttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaaatttttttcatgagcttata |
1190134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12014663 - 12014751
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
12014663 |
gttagcttataacttgttggattagtttataagctcgttagatgaaaacgtggtgtgtgtggtaacaagtttttttcatgagcttatag |
12014751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 28343716 - 28343799
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagt |
90 |
Q |
| |
|
|||||| |||||||| | |||||||||||||| ||||||||||||| ||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
28343716 |
ttatagtttgttggagtaacttataagttcgttggatgaaaacgtgatgtgtttggtaacaagtttttttcatgagcttatagt |
28343799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 2459722 - 2459637
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | || ||||||||||||| ||| |||||||||||||||| || ||||||||| |
|
|
| T |
2459722 |
tagcttatagcttgttggattagcttataagcttattggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttata |
2459637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 41865310 - 41865395
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| | ||| ||||||||||||| ||| |||||||| ||||||| |||||||||||| |
|
|
| T |
41865310 |
tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacgagcttttctcatgagcttata |
41865395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 44278038 - 44277957
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttat |
87 |
Q |
| |
|
|||||||||||||||| | ||||||||| | ||| ||||||||||||| ||| |||||||||||||||| ||||||||||| |
|
|
| T |
44278038 |
cttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat |
44277957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25365781 - 25365869
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| ||||| |||||||||||||| || |||||||||| ||||| |||||||||||| |
|
|
| T |
25365781 |
gttagcttatagcttgttagattaacttataagctcgttggatgaaaacgtgacatgtttggtaacaaacttttcttatgagcttatag |
25365869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 28314919 - 28314844
Alignment:
| Q |
14 |
ttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||| || |||||| ||||||||| ||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
28314919 |
ttgttggattaacttataagctcattagataaaaacgtgatgtgtttggtaacaagcttttttcatgagcttatag |
28314844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 33076628 - 33076712
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||| ||||| |||| ||| ||||| ||||| |||||||| |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
33076628 |
tagcttatagtttgttagattagct-ataagctcgttggatgaaaatgtgacgtgtttggtaacaagcttttctcatgagcttata |
33076712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 2937360 - 2937446
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| ||| ||| |||| |||| ||| |||||||||| ||||| |||||||||||| |
|
|
| T |
2937360 |
tagcttatagcttgttgaattagcttataagtttgttggatcaaaatgtgatgtgtttggtaacaaacttttcttatgagcttatag |
2937446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 38058772 - 38058858
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||| | |||||||| | ||| | ||||||||||| ||| |||||||||||||||| || |||||||||| |
|
|
| T |
38058772 |
tagcttatagcttgttggactagcttataaccttgttggttgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttatag |
38058858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 46742479 - 46742565
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| || ||||||| | ||||||| | ||| ||||||||| ||| | | |||||||||||||||| ||||||||||||| |
|
|
| T |
46742479 |
tagcttatagtttcttggattagattataagcttgttggatgaaaacatgatgcgtttggtaacaagcttttctcatgagcttatag |
46742565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 9423128 - 9423060
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttt |
74 |
Q |
| |
|
|||||||||||||| ||| ||||||||| | ||| ||| |||| |||| ||| |||||||||||||||| |
|
|
| T |
9423128 |
cttatagcttgttgaattagcttataagcttgttggatcaaaatgtgatgtgtttggtaacaagctttt |
9423060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 31657165 - 31657105
Alignment:
| Q |
14 |
ttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttt |
74 |
Q |
| |
|
|||||||||| ||||||||| |||| ||||||||||||| ||| |||| ||||||||||| |
|
|
| T |
31657165 |
ttgttggattagcttataagctcgtcggatgaaaacgtgatgtgtttggcaacaagctttt |
31657105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 31)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 35647439 - 35647527
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
35647439 |
tagcttatagcttgttggatttgcttataagctcgttagatgaaaatgtgacgtgtttggtaacaagcttttttcatgagcttatagtg |
35647527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 4060375 - 4060461
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4060375 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagctttttccatgagcttatag |
4060461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 27826732 - 27826818
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
27826732 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
27826818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 28494352 - 28494266
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
28494352 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
28494266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 42265349 - 42265263
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
42265349 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttatag |
42265263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 42329099 - 42329013
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
42329099 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
42329013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 46672529 - 46672615
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
46672529 |
tagcttataacttgttggattagcttataagctcgttagatgaaaatgtgacgtgtttggtaacaagcttttttcatgagcttatag |
46672615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 28958198 - 28958113
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
28958198 |
tagcttatagcttgttggattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttata |
28958113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 43156591 - 43156679
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||| ||| ||||||||||||| ||||||||||||||| |
|
|
| T |
43156591 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttgataacaagcttttttcatgagcttatagtg |
43156679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 46350914 - 46350826
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||||| | ||||||| ||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
46350914 |
gttagcttatagcttgttggattagtttataagctcgttagatgaaaacatgacgtgtttggtaacaaacttttttcatgagcttatag |
46350826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 25696056 - 25696142
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
25696056 |
tagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgagcttatag |
25696142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 43337656 - 43337742
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
43337656 |
tagcttatagcttgttggattagcttataagctcgttagacgaaaacgttgcgtgtttggtaacaagcttttttcatgagcttatag |
43337742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 46536145 - 46536231
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
46536145 |
tagcttgtagcttgttggattagcttataaactcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
46536231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 29994290 - 29994206
Alignment:
| Q |
5 |
gcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||| ||||| |||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
29994290 |
gcttatagtttgttagattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
29994206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 28235308 - 28235394
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
28235308 |
tagcttatagtttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttcttatgagcttatag |
28235394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14792195 - 14792107
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| ||||| ||| ||||||||| ||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
14792195 |
gttagcttatagcttgttagattagcttataagctcgttggattaaaacgtgatgtgtttggtaacaaacttttttcatgagcttatag |
14792107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 6243894 - 6243975
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| |||||||| |||||||||||| |
|
|
| T |
6243894 |
ttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacgagcttttt-tatgagcttatag |
6243975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 31031966 - 31031884
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| |||||||| |||||| ||||||||||| |||| ||||||||||||||||| ||| ||||||||| |
|
|
| T |
31031966 |
ttatagcttgttggattaacttataagctcgttaaatgaaaacgtggcgtgtttggtaacaagcttttttcataagcttatag |
31031884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 48935258 - 48935344
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| | ||||||| ||||| ||| |||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
48935258 |
tagcttatagcttgttggattagtttataagctcgttggatagaaacgtgacgtgtttggtaacaaacttttttcatgagcttatag |
48935344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 46615751 - 46615670
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||| ||||| |||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
46615751 |
ttatagtttgttagattagcttataagctcgttagatgaaaacgtagcgtgtttggtaacaagcttttttcatgagcttata |
46615670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31226949 - 31226861
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
31226949 |
gttagcttataacttgttgaattagtttataagctcattagatgaaaatgtgacgtgtttggtaacaagctttttttatgagcttatag |
31226861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 42328242 - 42328154
Alignment:
| Q |
2 |
ttagcttata-gcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||| |||||||||||||| |||||| | ||||||| ||||||||| |||||||||||| |
|
|
| T |
42328242 |
ttagcttataagcttgttggattagcttataagctcgttagatgaaaatgtgacgagtttggtaataagctttttttatgagcttatag |
42328154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 21920872 - 21920786
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||| | ||||||||| | ||| |||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
21920872 |
tagcttatagcttgttggactagcttataagctagttgaatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
21920786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 981358 - 981446
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| | ||| |||||||||||| ||| ||| ||||||||||||| || |||||||||| |
|
|
| T |
981358 |
gttagcttatagtttgttggattagcttataagctagttgaatgaaaacgtgatgtgtttgataacaagcttttttcacgagcttatag |
981446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 46534431 - 46534518
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagt |
90 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||| ||||| || ||||||||||| |
|
|
| T |
46534431 |
tagcttatagcttgttggattagcttataagcttgttggatgaaaacgtgatgtgtatggtaacaaacttttctcacgagcttatagt |
46534518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 3370476 - 3370558
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| || ||||||| | ||||||||| ||| ||||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
3370476 |
ttatagttttttggattagtttataagtttgttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
3370558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42997541 - 42997623
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| |||||||| | ||||||||| ||||| ||||||||||||| ||| |||||||||||||||| || |||||||||| |
|
|
| T |
42997541 |
ttatagtttgttggactagcttataagctcgttggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttatag |
42997623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 47479817 - 47479894
Alignment:
| Q |
11 |
agcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||| ||| |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||| |||||| |
|
|
| T |
47479817 |
agctagttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgaacttata |
47479894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 6476949 - 6477020
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttt |
74 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
6476949 |
tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagttttt |
6477020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 30524030 - 30523945
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| || ||||| | ||| ||||||||||||| ||| |||||||||| |||| || ||||||||| |
|
|
| T |
30524030 |
tagcttatagcttgttggattaactcataagcttgttggatgaaaacgtgatgtgtatggtaacaagtttttctcacgagcttata |
30523945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43158271 - 43158197
Alignment:
| Q |
1 |
gttagcttatagct-tgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttt |
74 |
Q |
| |
|
||||||||||| || |||| |||| | ||||||| ||||| ||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
43158271 |
gttagcttatatctctgttagattagtttataagctcgttggatgaaaacgtgatgtgtttggtaagaagctttt |
43158197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 23)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8875694 - 8875782
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
8875694 |
gttagcttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
8875782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 12160990 - 12160904
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
12160990 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
12160904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 30523632 - 30523718
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
30523632 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
30523718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 36936149 - 36936063
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
36936149 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttaatgagcttatag |
36936063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 39241237 - 39241151
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
39241237 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttatag |
39241151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 42519737 - 42519823
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
42519737 |
tagcttatagcttgttgcattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
42519823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 7454556 - 7454641
Alignment:
| Q |
4 |
agcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
7454556 |
agcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
7454641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 1876109 - 1876023
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
1876109 |
tagcttatagtttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
1876023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 14958147 - 14958229
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
14958147 |
ttatagcttgttggattagtttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
14958229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43568384 - 43568472
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
43568384 |
gttaacttatagcttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttatcatgagcttatag |
43568472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 16496692 - 16496606
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| | ||||||| |||||||||||||||||| |||| |||| |||||||||||| ||||||||||||| |
|
|
| T |
16496692 |
tagcttatagcttgttggattagtttataagctcgttagatgaaaacgtggcgtgtttggcaacaagcttttttcatgagcttatag |
16496606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 34245269 - 34245355
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
34245269 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggtttgtttggtaacaagcttttttcatgagcttatag |
34245355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 5774120 - 5774202
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||||||||||||| |||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
5774120 |
ttatagcttgttggattagcttataagcttgttagatgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttatag |
5774202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 38324261 - 38324347
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| |||||||||||||||||| |||| ||| ||||||| ||||| ||||||||||||| |
|
|
| T |
38324261 |
tagcttatagcttgttgaattagcttataagctcgttagatgaaaacgtggcgtgtttgataacaagtttttttcatgagcttatag |
38324347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 6432193 - 6432278
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||| | ||||||||| | ||| ||||||||||||| ||| |||||||||||||||| |||||||||||| |
|
|
| T |
6432193 |
tagcttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttata |
6432278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 11018108 - 11018039
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctt |
72 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
11018108 |
tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacgagctt |
11018039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 42097988 - 42097902
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| | || ||||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
42097988 |
tagcttatagcttcttggattagcttataagcttattggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
42097902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 43496185 - 43496271
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||| || |||||||| |||| |||||||||||| |
|
|
| T |
43496185 |
tagcttatagcttgttgcattagcttataagctcgttggatgaaaacgtgacgtgtttagtaacaagtttttcttatgagcttatag |
43496271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 45376936 - 45377018
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||| | ||||||||| | ||| ||||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
45376936 |
ttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
45377018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3147468 - 3147558
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||||||||| |||||| |||| ||||||||| | || |||||||| |||||||| ||||||||||| |||| ||||||||||||||| |
|
|
| T |
3147468 |
gttagcttataacttgttagattagcttataagcttcttggatgaaaatgtgacgtgtttggtaacaagtttttctcatgagcttatagtg |
3147558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 10361416 - 10361501
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||| | ||||||||| || || ||||||||| ||| ||| ||||||| ||||||||| || ||||||||| |
|
|
| T |
10361416 |
tagcttatagcttgttggactagcttataagctcattggatgaaaacatgatgtgtttggtaataagcttttttcacgagcttata |
10361501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 35422070 - 35422152
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| || ||||||| |||||||| | ||| | ||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
35422070 |
ttatagttttttggattagcttataaacttgttggttgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
35422152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 28014488 - 28014573
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||| ||| ||| ||||||||||| ||| ||| ||||| ||||||| ||| ||||| ||||| |||||||||||| |
|
|
| T |
28014488 |
tagcttatagcttattgaattagcttataagtttgttggatcaaaacatgacgtgtttgacaacaaacttttctcatgagcttata |
28014573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 67; Significance: 6e-30; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 8321507 - 8321421
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
8321507 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
8321421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 8879387 - 8879473
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
8879387 |
tagcttatagtttgttggattagcttataagttcgttagatgaaaacgtgacgtatttggtaacaagcttttttcatgagcttatag |
8879473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 34436051 - 34435965
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
34436051 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
34435965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 41991760 - 41991674
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
41991760 |
tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
41991674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 51062933 - 51063019
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
51062933 |
tagcttatagcttgttgaattatcttataagttcgttagatgaaaacgtgacgtgtttgataacaagcttttttcatgagcttatag |
51063019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52184905 - 52184817
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
52184905 |
gttagcttatagcttgttagattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
52184817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54463534 - 54463446
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||| ||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
54463534 |
gttaacttatagtttgttggattatcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttatag |
54463446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 12055591 - 12055505
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
12055591 |
tagcttatagtttgttggattagcttataagctccttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
12055505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 30318020 - 30317934
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||| |
|
|
| T |
30318020 |
tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttgataacaagattttttcatgagcttatag |
30317934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 48051017 - 48051103
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| | ||||| ||||||||||||| |
|
|
| T |
48051017 |
tagcttatagcttgttggattaacttataagctcgttagatgaaaacgtgacgtgtttggtaacacgtttttttcatgagcttatag |
48051103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 2557975 - 2557892
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| |||| |||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
2557975 |
cttatagcttgtttgattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttatag |
2557892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 9558936 - 9558850
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||| || |||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
9558936 |
tagcttatagcttgttagattagcttataagctcgttggaagaaaacgtgacgtgtttggtaacaagcttttctcatgagcttatag |
9558850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 17666825 - 17666911
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||| ||||||| |||||||| ||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
17666825 |
tagcttatagcttattggattaacttataagctcgttggatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttatag |
17666911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 1361694 - 1361779
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||| |||| ||| |||| ||| ||||||||||||| |||||||||||| |
|
|
| T |
1361694 |
tagcttatagcttgttggattagcttataagctcgttagataaaaatgtggcgtgtttgataacaagcttttttcatgagcttata |
1361779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 52959315 - 52959399
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||| |||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
52959315 |
tagcttatagtttgttggattaacttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttt-catgagcttata |
52959399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 19274753 - 19274824
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttt |
74 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||| |||||||||||||||| |
|
|
| T |
19274753 |
tagcttatagcttgttggattagcttataagctcgttggatgaaaatgtgacgtgtttggtaacaagctttt |
19274824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30743092 - 30743002
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagtg |
91 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||| | |||||||||||| ||| ||| ||||||||||||||||| |||| |||||||||| |
|
|
| T |
30743092 |
gttagtttatagtttgttggattagcttataagctggttagatgaaaatgtggtgtgtttggtaacaagcttttttcatgtgcttatagtg |
30743002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 35405562 - 35405648
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| | |||||| |||||||||||||||||||||| ||| |||||| |||||| ||||||||||||| |
|
|
| T |
35405562 |
tagcttatagtttgttggattagtttataaactcgttagatgaaaacgtgacgtatttgataacaaacttttttcatgagcttatag |
35405648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 36237859 - 36237945
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||||||| |||||||| ||||||||| |||| ||| ||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
36237859 |
tagcttatagtttgttggattaacttataagctcgttagataaaaatgtggcgtatttggtaacaagcttttttcatgagcttatag |
36237945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42293004 - 42293086
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||| |||||||| | ||||||||||||||| ||||||||||||| ||| |||||||||||||||| || |||||||||| |
|
|
| T |
42293004 |
ttatagtttgttggactagcttataagttcgttggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttatag |
42293086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 32999733 - 32999648
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| | ||| ||||||||||||| ||| |||||||| ||||||| |||||||||||| |
|
|
| T |
32999733 |
tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacgagcttttctcatgagcttata |
32999648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 12122250 - 12122164
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| | ||| || |||| |||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
12122250 |
tagcttatagcttgttgaattagcttataagcttgttgtatcaaaatgtgacgtgtttggtaacaagcttttttcgtgagcttatag |
12122164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 12764698 - 12764780
Alignment:
| Q |
7 |
ttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||| ||||||| ||||||||| | | | ||||||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
12764698 |
ttatagctttttggattagcttataagcttgctggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttatag |
12764780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 51980753 - 51980841
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||| ||||||||||||||| | ||||||||| | ||| ||||||||| ||| ||| |||||||| |||||||| || |||||||||| |
|
|
| T |
51980753 |
gttagtttatagcttgttggactagcttataagcttgttggatgaaaacatgatgtgtttggtaacgagcttttttcacgagcttatag |
51980841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 42528132 - 42528061
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttt |
74 |
Q |
| |
|
||||||||||||||||||| | ||||||||| | ||| ||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
42528132 |
tagcttatagcttgttggactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagttttt |
42528061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 6124734 - 6124821
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatagt |
90 |
Q |
| |
|
||||||||| ||||||||| | |||||||| | ||| ||||||||||||| ||| |||||||||| ||||| || ||||||||||| |
|
|
| T |
6124734 |
tagcttataacttgttggactatcttataagcttgtttgatgaaaacgtgatgtgtttggtaacaaacttttctcacgagcttatagt |
6124821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43968430 - 43968343
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||||||| |||||| ||| ||||||||| | ||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||| |
|
|
| T |
43968430 |
gttagcttataatttgttgaattagcttataagcttgttggatcaaaacatgacgtgtttggtaacaagtttttctcatgagcttata |
43968343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 55226321 - 55226404
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||| ||| |||| ||||||||| ||||| |||||||||||||| | ||| |||||||||||| |||||||||||| |
|
|
| T |
55226321 |
cttatagctcgttagattagcttataagctcgttggatgaaaacgtgacatatttgataacaagcttttcttatgagcttatag |
55226404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 51760508 - 51760580
Alignment:
| Q |
17 |
ttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||| |||||||| | ||| ||||||||||||| ||| |||||||||||||||| || |||||||||| |
|
|
| T |
51760508 |
ttggattaacttataagcttgttggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttatag |
51760580 |
T |
|
Back To:
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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10802763 - 10802677
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttat |
87 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||| ||| ||| |||| ||||||| || ||||||| |||| ||||||||||| |
|
|
| T |
10802763 |
gttagcttatagcttcttgaattagcttataagtttgtttgatcaaaatatgacgtgtttaataacaagtttttctcatgagcttat |
10802677 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 10809575 - 10809491
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttat |
87 |
Q |
| |
|
||||||||||||| ||| ||| ||||||||| | ||| ||| ||||| ||||||| ||| ||| ||| |||| ||||||||||| |
|
|
| T |
10809575 |
tagcttatagcttcttgaattagcttataagcttgttggatcaaaacatgacgtgtttgataataagtttttctcatgagcttat |
10809491 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25999247 - 25999160
Alignment:
| Q |
1 |
gttagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||| ||| | | ||||||||| ||| ||||||||||||| ||| |||| ||||||||||| || |||||||||| |
|
|
| T |
25999247 |
gttagcttatagcttattgaactaatttataagtttgttggatgaaaacgtgatgtgtttgg-aacaagcttttctcacgagcttatag |
25999160 |
T |
|
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Target: scaffold0060 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 57925 - 57839
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| ||||| ||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
57925 |
tagcttatagcttgttggattagcttataagctcgttagacgaaaatgtggcgtgtttggtaacaagcttttttcatgagcttatag |
57839 |
T |
|
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Target: scaffold0330 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0330
Description:
Target: scaffold0330; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 7014 - 7100
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttatag |
89 |
Q |
| |
|
|||||||||| |||||| ||| |||||||| ||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
7014 |
tagcttatagtttgttgaattagcttataaattcgttagatgaaaacgtggcgtgtttggtaacaaacttttttcatgagcttatag |
7100 |
T |
|
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Target: scaffold0076 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 14267 - 14182
Alignment:
| Q |
3 |
tagcttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
|||||||||| || ||||||| | ||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |
|
|
| T |
14267 |
tagcttatagtttattggattagattataagctcgttagatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttata |
14182 |
T |
|
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Target: scaffold1391 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1391
Description:
Target: scaffold1391; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 1568 - 1486
Alignment:
| Q |
6 |
cttatagcttgttggattggcttataagttcgttagatgaaaacgtgacgtgattggtaacaagctttttccatgagcttata |
88 |
Q |
| |
|
||||||| |||||| | | ||||||||| | ||| ||||||||||||| ||| |||||||||| ||||| |||||||||||| |
|
|
| T |
1568 |
cttatagtttgttgaactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaaacttttctcatgagcttata |
1486 |
T |
|
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