View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11301_low_51 (Length: 225)

Name: NF11301_low_51
Description: NF11301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11301_low_51
NF11301_low_51
[»] chr1 (20 HSPs)
chr1 (1-217)||(41398282-41398497)
chr1 (1-217)||(41390627-41390842)
chr1 (1-199)||(25444931-25445128)
chr1 (1-199)||(39445546-39445742)
chr1 (1-199)||(44023716-44023912)
chr1 (1-199)||(1054854-1055050)
chr1 (1-134)||(24787280-24787415)
chr1 (60-199)||(25439738-25439875)
chr1 (1-186)||(43988314-43988503)
chr1 (135-215)||(24787148-24787226)
chr1 (134-197)||(24202573-24202635)
chr1 (1-134)||(24202686-24202820)
chr1 (1-134)||(19358760-19358894)
chr1 (1-134)||(19361349-19361483)
chr1 (1-134)||(19379989-19380123)
chr1 (134-197)||(19366112-19366174)
chr1 (1-50)||(27104372-27104423)
chr1 (1-50)||(26644898-26644948)
chr1 (1-41)||(47703946-47703987)
chr1 (134-197)||(19361237-19361298)
[»] chr5 (33 HSPs)
chr5 (1-217)||(15044732-15044947)
chr5 (1-217)||(1456986-1457201)
chr5 (1-217)||(27445016-27445231)
chr5 (1-217)||(27449860-27450075)
chr5 (1-217)||(43592325-43592540)
chr5 (1-217)||(43598770-43598985)
chr5 (1-217)||(43604262-43604477)
chr5 (1-217)||(43609754-43609969)
chr5 (1-186)||(28807429-28807611)
chr5 (1-156)||(37556506-37556661)
chr5 (1-156)||(37561328-37561483)
chr5 (1-133)||(30631452-30631586)
chr5 (1-186)||(33791362-33791549)
chr5 (1-186)||(2785421-2785608)
chr5 (1-134)||(31180260-31180394)
chr5 (1-186)||(31396843-31397032)
chr5 (1-186)||(31401700-31401889)
chr5 (134-215)||(30631640-30631719)
chr5 (134-215)||(31180447-31180526)
chr5 (134-215)||(24136080-24136159)
chr5 (1-186)||(33768225-33768417)
chr5 (134-197)||(35387893-35387955)
chr5 (1-134)||(38192219-38192353)
chr5 (1-134)||(38219444-38219578)
chr5 (1-134)||(24135894-24136028)
chr5 (1-134)||(35387708-35387842)
chr5 (134-197)||(38219629-38219691)
chr5 (1-50)||(3880345-3880396)
chr5 (1-50)||(10281797-10281848)
chr5 (1-50)||(9353333-9353383)
chr5 (1-50)||(12084176-12084226)
chr5 (1-50)||(15464578-15464628)
chr5 (1-50)||(36932351-36932401)
[»] chr2 (21 HSPs)
chr2 (1-217)||(39811812-39812027)
chr2 (1-199)||(32246834-32247031)
chr2 (1-186)||(19344467-19344655)
chr2 (1-186)||(19349325-19349513)
chr2 (1-100)||(44312563-44312663)
chr2 (1-134)||(11098843-11098978)
chr2 (134-215)||(11098711-11098790)
chr2 (1-134)||(14291534-14291669)
chr2 (134-215)||(9296186-9296265)
chr2 (1-134)||(9296317-9296452)
chr2 (134-215)||(14291722-14291801)
chr2 (1-134)||(3491796-3491930)
chr2 (1-134)||(25398541-25398675)
chr2 (1-134)||(25403679-25403813)
chr2 (1-134)||(25407668-25407802)
chr2 (134-197)||(25409860-25409922)
chr2 (134-197)||(3491981-3492043)
chr2 (1-50)||(13569374-13569425)
chr2 (1-50)||(21629989-21630040)
chr2 (1-50)||(28259178-28259228)
chr2 (1-41)||(8040106-8040147)
[»] chr7 (29 HSPs)
chr7 (1-217)||(31109407-31109622)
chr7 (1-217)||(24024151-24024365)
chr7 (5-217)||(12396961-12397172)
chr7 (6-210)||(12406382-12406585)
chr7 (1-186)||(19992359-19992544)
chr7 (1-186)||(21812092-21812277)
chr7 (1-186)||(24266054-24266241)
chr7 (1-134)||(20357463-20357598)
chr7 (134-215)||(20357331-20357410)
chr7 (1-186)||(24261175-24261362)
chr7 (136-215)||(4873310-4873387)
chr7 (134-215)||(1533228-1533307)
chr7 (134-215)||(2058202-2058281)
chr7 (1-134)||(1533359-1533495)
chr7 (1-134)||(2058011-2058147)
chr7 (1-186)||(16884975-16885162)
chr7 (1-154)||(16880119-16880273)
chr7 (1-45)||(4866776-4866820)
chr7 (1-134)||(21639854-21639988)
chr7 (1-134)||(21646052-21646186)
chr7 (1-134)||(18408809-18408943)
chr7 (1-134)||(18413685-18413819)
chr7 (134-197)||(21640039-21640101)
chr7 (134-197)||(21646237-21646299)
chr7 (134-197)||(18408993-18409055)
chr7 (134-197)||(18413869-18413931)
chr7 (1-50)||(29159849-29159900)
chr7 (1-50)||(44848685-44848735)
chr7 (1-40)||(21983330-21983370)
[»] chr6 (15 HSPs)
chr6 (1-215)||(14737403-14737615)
chr6 (1-215)||(14742263-14742475)
chr6 (1-217)||(11857020-11857235)
chr6 (1-217)||(22010521-22010736)
chr6 (1-202)||(28184551-28184754)
chr6 (1-199)||(28155412-28155608)
chr6 (1-199)||(6438547-6438743)
chr6 (1-186)||(16838790-16838977)
chr6 (1-186)||(6005463-6005650)
chr6 (1-186)||(33330297-33330484)
chr6 (1-186)||(33335794-33335981)
chr6 (134-215)||(5674554-5674633)
chr6 (1-134)||(5674685-5674821)
chr6 (105-186)||(5343628-5343710)
chr6 (1-50)||(5757479-5757529)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-217)||(34886-35101)
[»] chr8 (34 HSPs)
chr8 (1-217)||(7289750-7289965)
chr8 (1-199)||(25328120-25328317)
chr8 (1-199)||(39784665-39784861)
chr8 (1-134)||(6311343-6311477)
chr8 (1-186)||(35745437-35745624)
chr8 (1-134)||(36979423-36979558)
chr8 (1-186)||(10684116-10684303)
chr8 (1-134)||(30655692-30655827)
chr8 (134-217)||(6311532-6311613)
chr8 (1-133)||(33037724-33037857)
chr8 (1-134)||(18870477-18870613)
chr8 (134-215)||(18870345-18870424)
chr8 (134-215)||(30655880-30655959)
chr8 (1-134)||(18853083-18853219)
chr8 (134-215)||(10688924-10689003)
chr8 (134-215)||(18852951-18853030)
chr8 (122-199)||(25327994-25328070)
chr8 (1-134)||(4759991-4760126)
chr8 (134-215)||(33037592-33037671)
chr8 (134-216)||(4759857-4759938)
chr8 (1-134)||(10689058-10689194)
chr8 (134-197)||(1261758-1261820)
chr8 (134-215)||(36979611-36979689)
chr8 (1-134)||(1261871-1262005)
chr8 (1-134)||(31071146-31071280)
chr8 (134-195)||(31071035-31071095)
chr8 (1-50)||(6127267-6127318)
chr8 (134-197)||(26288121-26288183)
chr8 (134-197)||(26301378-26301440)
chr8 (134-197)||(26313372-26313434)
chr8 (1-50)||(4456074-4456124)
chr8 (1-50)||(7412387-7412437)
chr8 (134-197)||(7412569-7412629)
chr8 (1-41)||(26403240-26403281)
[»] chr4 (18 HSPs)
chr4 (1-217)||(9224231-9224446)
chr4 (1-217)||(9229018-9229233)
chr4 (1-214)||(51520503-51520715)
chr4 (1-199)||(45347658-45347856)
chr4 (1-199)||(3814070-3814266)
chr4 (1-199)||(45357138-45357335)
chr4 (1-199)||(5732711-5732907)
chr4 (1-162)||(18855773-18855933)
chr4 (1-134)||(24741986-24742121)
chr4 (1-86)||(56146664-56146750)
chr4 (128-217)||(18712590-18712677)
chr4 (1-132)||(29760687-29760821)
chr4 (134-215)||(24742174-24742253)
chr4 (134-215)||(29760874-29760954)
chr4 (1-50)||(31985635-31985685)
chr4 (1-50)||(16623293-16623344)
chr4 (1-50)||(36315230-36315280)
chr4 (1-50)||(36329439-36329489)
[»] chr3 (35 HSPs)
chr3 (1-217)||(22173019-22173234)
chr3 (1-199)||(18656481-18656677)
chr3 (1-134)||(28501613-28501748)
chr3 (1-134)||(28503780-28503915)
chr3 (1-186)||(2676939-2677126)
chr3 (1-186)||(2672783-2672970)
chr3 (1-186)||(24968153-24968340)
chr3 (1-134)||(7167290-7167425)
chr3 (1-186)||(8512263-8512450)
chr3 (1-186)||(8517143-8517330)
chr3 (134-215)||(7167478-7167558)
chr3 (134-215)||(28501480-28501560)
chr3 (134-215)||(28503647-28503727)
chr3 (134-215)||(2671370-2671449)
chr3 (134-215)||(40372580-40372659)
chr3 (134-212)||(8477598-8477674)
chr3 (134-216)||(8738846-8738926)
chr3 (1-131)||(8738982-8739114)
chr3 (1-131)||(9091220-9091352)
chr3 (134-215)||(9091085-9091164)
chr3 (1-134)||(8477408-8477545)
chr3 (1-186)||(32475531-32475717)
chr3 (1-186)||(32480389-32480575)
chr3 (1-134)||(32143367-32143501)
chr3 (1-134)||(40372712-40372846)
chr3 (1-134)||(2671502-2671637)
chr3 (1-134)||(26928507-26928642)
chr3 (1-134)||(27453004-27453138)
chr3 (134-195)||(1306179-1306239)
chr3 (1-50)||(6794704-6794754)
chr3 (1-50)||(8370477-8370527)
chr3 (1-50)||(16264396-16264446)
chr3 (1-50)||(27974943-27974993)
chr3 (3-50)||(36029141-36029190)
chr3 (3-50)||(1305996-1306044)
[»] scaffold0355 (2 HSPs)
scaffold0355 (1-162)||(9521-9681)
scaffold0355 (42-217)||(3672-3845)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-199)||(409-605)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-186)||(14161-14348)
scaffold0197 (1-186)||(19017-19204)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-186)||(2103-2290)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-186)||(148808-148995)
[»] scaffold0009 (1 HSPs)
scaffold0009 (91-186)||(176829-176925)
[»] scaffold0188 (4 HSPs)
scaffold0188 (134-197)||(17756-17818)
scaffold0188 (134-197)||(23849-23911)
scaffold0188 (1-134)||(17869-18003)
scaffold0188 (1-134)||(23962-24096)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-50)||(8420-8470)
[»] scaffold0087 (1 HSPs)
scaffold0087 (1-50)||(43962-44012)


Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 41398282 - 41398497
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  41398282 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 41398381  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41398382 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaacccatt 41398480  T
Q  201 tggttccctcctttgct 217  Q
    |||||||||||||||||    
T  41398481 tggttccctcctttgct 41398497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 41390627 - 41390842
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  41390627 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 41390726  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  41390727 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaatccatt 41390825  T
Q  201 tggttccctcctttgct 217  Q
    |||||||||||||||||    
T  41390826 tggttccctcctttgct 41390842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 25445128 - 25444931
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  25445128 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagag-ctacccttt 25445030  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  25445029 ggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 25444931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 39445546 - 39445742
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  39445546 agagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 39445643  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  39445644 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 39445742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 44023912 - 44023716
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  44023912 agagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttgtcaagctttacacatgaacaaaccctagaa-ctacccttt 44023815  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  44023814 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 44023716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 1055050 - 1054854
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  1055050 agagcaactctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 1054953  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  1054952 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 1054854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24787415 - 24787280
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |  |||||||||||| |||||||  |||||| ||||||||||||||||    
T  24787415 agagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagcattacacaagaacaaatcctagattctaccctt 24787316  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||| ||| || ||||||||| ||||||||||||||    
T  24787315 tggtgtttcccaactctcacaatatgaaccctaaaa 24787280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 25439875 - 25439738
Alignment:
Q  60 tcaagctttacacataaacaaagcctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcc 159  Q
    ||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25439875 tcaagctttacacatgaacaaaccctagag-ctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgtttttcc 25439777  T
Q  160 caaacccaagagacactctcaacaaagacactcaacccat 199  Q
    | |||| |||| || |||||| ||||| ||| || |||||    
T  25439776 c-aacctaagaaactctctcatcaaaggcacacaccccat 25439738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 43988503 - 43988314
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataa--acaaagcctagattctaccc 96  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  | ||| ||||||| ||||||    
T  43988503 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaaaccctagat-ctaccc 43988405  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  43988404 tttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 43988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 24787226 - 24787148
Alignment:
Q  135 cccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24787226 cccaaggtgattataatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 24787148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 24202635 - 24202573
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  24202635 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc 24202573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24202820 - 24202686
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  |||||||||||||| |    
T  24202820 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagacctagattctacccat 24202722  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  24202721 ttgtgtttccccactctcacaatatgaaccctaaaa 24202686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 19358894 - 19358760
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  |||||||||||||| |    
T  19358894 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagacctagattctacccat 19358796  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| ||||||||| || ||||||||||||||    
T  19358795 ttgtgtttccccactctctcaatatgaaccctaaaa 19358760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 19361483 - 19361349
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||  | ||||| |||||||  |||||  |||||||||||||| |    
T  19361483 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagtttgcaagc-ttacacaagaacaagacctagattctacccat 19361385  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| ||||||||| || ||||||||||||||    
T  19361384 ttgtgtttccccactctctcaatatgaaccctaaaa 19361349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 19380123 - 19379989
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||  | ||||| |||||||  |||||  |||||||||||||| |    
T  19380123 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagtttgcaagc-ttacacaagaacaagacctagattctacccat 19380025  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| ||||||||| || ||||||||||||||    
T  19380024 ttgtgtttccccactctctcaatatgaaccctaaaa 19379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 19366174 - 19366112
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| ||||||| |||||||||| |||||||||  ||| | |||||||||||||||||    
T  19366174 acccaaggtgtttacaatatttttcccaa-cccaagagatcctcactacaaagacactcaaccc 19366112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27104423 - 27104372
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  27104423 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 27104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26644948 - 26644898
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  26644948 agagcagctctccaatccattatgatgaaagtgttacaaagagttacaaga 26644898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47703987 - 47703946
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag 41  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  47703987 agagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 19361298 - 19361237
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||| ||  |||||||||||  ||| | |||||||||||||||||    
T  19361298 acccaaggtgtttacaatgttttccc--aacccaagagatcctcactacaaagacactcaaccc 19361237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15044732 - 15044947
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  15044732 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctagattctaccctttg 15044831  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15044832 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccca-t 15044930  T
Q  201 tggttccctcctttgct 217  Q
    |||||||||||||||||    
T  15044931 tggttccctcctttgct 15044947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1457201 - 1456986
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  1457201 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 1457102  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  1457101 ggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 1457004  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  1457003 ttggttccctcctttgct 1456986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 27445016 - 27445231
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  27445016 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 27445115  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  27445116 ggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 27445213  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  27445214 ttggttccctcctttgct 27445231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 27449860 - 27450075
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  27449860 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 27449959  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  27449960 ggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 27450057  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  27450058 ttggttccctcctttgct 27450075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 43592325 - 43592540
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43592325 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 43592424  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  43592425 ggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 43592522  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  43592523 ttggttccctcctttgct 43592540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 43598770 - 43598985
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43598770 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 43598869  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  43598870 ggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 43598967  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  43598968 ttggttccctcctttgct 43598985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 43604262 - 43604477
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43604262 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 43604361  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  43604362 ggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 43604459  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  43604460 ttggttccctcctttgct 43604477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 43609754 - 43609969
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43609754 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 43609853  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  43609854 ggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 43609951  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  43609952 ttggttccctcctttgct 43609969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 28807611 - 28807429
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  28807611 agagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagaatctagctttcaagctttacacatgaacaaaccctagat-ctaccctttg 28807514  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaag 186  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  28807513 gtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaag 28807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37556661 - 37556506
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  37556661 agagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 37556563  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttt 156  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  37556562 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttt 37556506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37561483 - 37561328
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  37561483 agagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 37561385  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttt 156  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  37561384 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttt 37561328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 30631452 - 30631586
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| | ||||||||||||||    
T  30631452 agagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacacatgaacaaaccatagattctaccctt 30631551  T
Q  99 tggtattttcccactctcacactatgaaccctaaa 133  Q
    |||| ||| |||||||||||| |||||||||||||    
T  30631552 tggtgtttccccactctcacaatatgaaccctaaa 30631586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 33791362 - 33791549
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  ||||||||    
T  33791362 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctt 33791460  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33791461 tggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 2785421 - 2785608
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||| ||| |||||| ||||||  ||||||||    
T  2785421 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttactcatgaacaaaccctagac-ctaccctt 2785519  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2785520 tggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31180260 - 31180394
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  31180260 agagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacaca-agacaaaccctagattctaccctt 31180358  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||| ||| |||||||||||| |||||||| |||||    
T  31180359 tggtgtttccccactctcacaatatgaaccataaaa 31180394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 31397032 - 31396843
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataa--acaaagcctagattctaccc 96  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  | ||| ||||||| ||||||    
T  31397032 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaaaccctagat-ctaccc 31396934  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  31396933 tttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 31401889 - 31401700
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataa--acaaagcctagattctaccc 96  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  | |||  |||||| ||||||    
T  31401889 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaaactctagat-ctaccc 31401791  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  31401790 tttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31401700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 30631640 - 30631719
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30631640 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttg 30631719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 31180447 - 31180526
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31180447 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 31180526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 24136080 - 24136159
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  24136080 acccaaggtgattacaatgtttttccc-aacccaagagacactttctacaaagacactcaaccc-tttggttccctcctttg 24136159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 33768225 - 33768417
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||| |||||| ||||||  ||||||||    
T  33768225 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctaga-cctaccctt 33768323  T
Q  99 t--ggtattttccc-actc--tcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |  | ||||||||| || |   |||||||||||||   || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33768324 tcggttattttccctacccctccacactatgaaccaataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 35387893 - 35387955
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||    
T  35387893 acccaaggtgattacaatgttttttccaa-cccaagagaccctctctacaaagacactcaaccc 35387955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38192219 - 38192353
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  ||||| |||||||| |    
T  38192219 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcctagtttctacccat 38192317  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  38192318 ttgtgtttccccactctcacaatatgaaccctaaaa 38192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38219444 - 38219578
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  ||||| |||||||| |    
T  38219444 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcctagtttctacccat 38219542  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  38219543 ttgtgtttccccactctcacaatatgaaccctaaaa 38219578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 24135894 - 24136028
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||| |||||| || || || |||||||||||||| ||||||||||    |||| | ||||||| |||||  |||||  ||||||||||||||||    
T  24135894 agagcagctatccaatgcactaagatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagtcctagattctaccctt 24135992  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||| ||| |||||||||||| | ||||||||||||    
T  24135993 tggtgtttccccactctcacaatgtgaaccctaaaa 24136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 35387708 - 35387842
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||| | ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  || ||  ||||| |||||||| |    
T  35387708 agagcagctctccaatctactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaataagtcctagtttctacccat 35387806  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  35387807 ttgtgtttccccactctcacaatatgaaccctaaaa 35387842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 38219629 - 38219691
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||||    
T  38219629 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaaccc 38219691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3880345 - 3880396
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  3880345 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 3880396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10281797 - 10281848
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  10281797 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 10281848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9353383 - 9353333
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  9353383 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 9353333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12084226 - 12084176
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  12084226 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 12084176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15464578 - 15464628
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  15464578 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 15464628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36932401 - 36932351
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36932401 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36932351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 39812027 - 39811812
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  39812027 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 39811928  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  39811927 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttctc-aacctaagagacactctcaacaaagacactcaacccatt 39811829  T
Q  201 tggttccctcctttgct 217  Q
    |||||||||||||||||    
T  39811828 tggttccctcctttgct 39811812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32246834 - 32247031
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||||    
T  32246834 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctagattataccctttg 32246933  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  32246934 gtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 32247031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 19344467 - 19344655
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  ||||||||    
T  19344467 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctt 19344565  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt--ttttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||||||||  |||| || |||| |||| ||||||||| |||||    
T  19344566 tggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgtttttcccaacctaagaaacactctcatcaaag 19344655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 19349325 - 19349513
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  ||||||||    
T  19349325 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctt 19349423  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt--ttttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||||||||  |||| || |||| |||| ||||||||| |||||    
T  19349424 tggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgtttttcccaacctaagaaacactctcatcaaag 19349513  T

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Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44312663 - 44312563
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  44312663 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 44312564  T
Q  100 g 100  Q
    |    
T  44312563 g 44312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11098978 - 11098843
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| | ||||||| |||||  |||||| |||||||||||||||    
T  11098978 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagctt-acacaagaacaaaccctagattctaccct 11098880  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    ||||| ||| |||||||||||| ||||||||||||||    
T  11098879 ttggtgtttccccactctcacaatatgaaccctaaaa 11098843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 11098790 - 11098711
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11098790 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 11098711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 14291534 - 14291669
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  ||||||||||||||     
T  14291534 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 14291632  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |  || ||| |||||||||||| ||||||||||||||    
T  14291633 tatgtgtttccccactctcacaatatgaaccctaaaa 14291669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 9296265 - 9296186
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| || ||||||||||||||||| |||||||||||||||||    
T  9296265 acccaaggtgattacaatgtttttccc-aacccaatagacactttctacaaagacactcaaccc-tttggttccctcctttg 9296186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 9296452 - 9296317
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| | |||  |||||  ||||||||||||||     
T  9296452 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-atacaagaacaagccctagattctaccca 9296354  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |  || ||| |||||||||||| ||||||||||||||    
T  9296353 tatgtgtttccccactctcacaatatgaaccctaaaa 9296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 14291722 - 14291801
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||| |||||||||||||||||    
T  14291722 acccaaggtgattacaatgtttttccc-aacccaagagacactatctacaaagacgctcaaccc-tttggttccctcctttg 14291801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3491796 - 3491930
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  |||||||||||||| |    
T  3491796 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagacctagattctacccat 3491894  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  3491895 ttgtgtttccccactctcacaatatgaaccctaaaa 3491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 25398541 - 25398675
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  ||||| |||||||| |    
T  25398541 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcctagtttctacccat 25398639  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || |||  ||||||||||| ||||||||||||||    
T  25398640 ttgtgtttctccactctcacaatatgaaccctaaaa 25398675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 25403679 - 25403813
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  ||||| |||||||| |    
T  25403679 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcctagtttctacccat 25403777  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || |||  ||||||||||| ||||||||||||||    
T  25403778 ttgtgtttctccactctcacaatatgaaccctaaaa 25403813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 25407668 - 25407802
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  ||||| |||||||| |    
T  25407668 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcctagtttctacccat 25407766  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || |||  ||||||||||| ||||||||||||||    
T  25407767 ttgtgtttctccactctcacaatatgaaccctaaaa 25407802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 25409860 - 25409922
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  25409860 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 25409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 3491981 - 3492043
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| ||||||||||||| || |||||||||||  ||| | |||||||||||||||||    
T  3491981 acccaaggtgtttacaatgttttttcc-aacccaagagatcctcactacaaagacactcaaccc 3492043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13569374 - 13569425
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  13569374 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 13569425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21629989 - 21630040
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  21629989 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 21630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28259228 - 28259178
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  28259228 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 28259178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8040106 - 8040147
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag 41  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  8040106 agagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 31109622 - 31109407
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  31109622 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttgcacatgaacaaaccctagattctaccctttg 31109523  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  31109522 atattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaacccata 31109424  T
Q  201 tggttccctcctttgct 217  Q
    |||||||||||||||||    
T  31109423 tggttccctcctttgct 31109407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 24024365 - 24024151
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  24024365 agagcagctctccaatccaatatgagaaagtgttacaaaatgttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 24024266  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  24024265 gtattttcccactctcacacgatgaaccctaaaacccacggtgattacaatgttttt-ccaaacccaagagacactctcaacaaagacactcaaccca-t 24024168  T
Q  201 tggttccctcctttgct 217  Q
    |||||||||||||||||    
T  24024167 tggttccctcctttgct 24024151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 12396961 - 12397172
Alignment:
Q  5 cagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggta 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||| ||||||||||||||||||||     
T  12396961 cagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagcctttaatctttacacatgaacaaaccctagattctaccctttggtg 12397060  T
Q  104 ttttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttgg 203  Q
    ||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  12397061 tttccccactatcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttgg 12397158  T
Q  204 ttccctcctttgct 217  Q
    ||||||||||||||    
T  12397159 ttccctcctttgct 12397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 6 - 210
Target Start/End: Original strand, 12406382 - 12406585
Alignment:
Q  6 agctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtat 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| |    
T  12406382 agctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgt 12406481  T
Q  105 tttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggt 204  Q
    || |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  12406482 ttccccactctcacaatatgaaccctaaaagccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggt 12406579  T
Q  205 tccctc 210  Q
    ||||||    
T  12406580 tccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 19992359 - 19992544
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  19992359 agagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 19992457  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| |||||| || |||||    
T  19992458 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccccaacctaagaaacactcacatcaaag 19992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 21812277 - 21812092
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaa-gctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||| |||||||||||||| ||| || |||||||||||| |||||||||||| | |||| ||||||||||| |||||| ||||||| ||||||||    
T  21812277 agagcagctttccaatccaatatgtgaa-gtcttacaaaaggttccaagactctagcttgtcaaagctttacacatgaacaaaccctagat-ctaccctt 21812180  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  21812179 tggtattttcccactctcacactatgaacccataatcccaaggtgattacaatgtttttccccaacctaagaaacactctcatcaaag 21812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 24266241 - 24266054
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||    
T  24266241 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctt 24266143  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  24266142 tggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24266054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 20357598 - 20357463
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  ||  ||||||||||||||||||||  ||||   |||||||||||||| |    
T  20357598 agagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagctttacacaagaacatgccctagattctacccat 20357499  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
      || ||| |||||||||||| ||||||||||||||    
T  20357498 atgtgtttccccactctcacaatatgaaccctaaaa 20357463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 20357410 - 20357331
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20357410 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 20357331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 24261362 - 24261175
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||    
T  24261362 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctt 24261264  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  ||||||||||||||||  || |||||| ||||||||||||| ||| || |||| ||||  |||||||| |||||    
T  24261263 tggtaatttcccaacctcacactatgaacccataatcccaagatgattacaatgttgttttcccaacctaagattcactctcatcaaag 24261175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 4873310 - 4873387
Alignment:
Q  136 ccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4873310 ccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttg 4873387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 1533307 - 1533228
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1533307 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 1533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 2058202 - 2058281
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2058202 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 2058281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 1533495 - 1533359
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacat-aaacaaagcctagattctaccc 96  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||  |  |||| | ||||||| |||||  ||||||  ||||||||||||||    
T  1533495 agagcatctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagctt-acacaagaaacaagacctagattctaccc 1533397  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  1533396 tttggtgttttcccactctcacaatatgaaccctaaaa 1533359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2058011 - 2058147
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccc- 96  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| ||||||| |||||||  |||||  ||||||||||||||     
T  2058011 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcattcaagc-ttacacaagaacaagccctagattctaccca 2058109  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || | ||| |||||||||||| ||||||||||||||    
T  2058110 tatgttgtttccccactctcacaatatgaaccctaaaa 2058147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 16884975 - 16885162
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  |||||||||    
T  16884975 agagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctacccttt 16885073  T
Q  100 ggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    | | | |||||||  ||||||||||||||||  || |||||| ||||||||||||| ||| || |||| ||||  |||||||| |||||    
T  16885074 gataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgttgttttcccaacctaagattcactctcatcaaag 16885162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16880119 - 16880273
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  |||||||||    
T  16880119 agagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctacccttt 16880217  T
Q  100 ggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 154  Q
    | | | |||||||  ||||||||||||||||  || |||||| |||||||||||||    
T  16880218 gataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgtt 16880273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4866776 - 4866820
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggtta 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4866776 agagcagctctccaatccaatatgagaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 21639854 - 21639988
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||| | |||||||||||||| ||||||||||    |||| | ||||||| |||||  |||||  |||||||||||||| |    
T  21639854 agagcagctctccaatccactataatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagacctagattctacccat 21639952  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  21639953 ttgtgtttccccactctcacaatatgaaccctaaaa 21639988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 21646052 - 21646186
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||| ||| ||||||||||    |||| | ||||||| |||||  |||||  |||||||||||||| |    
T  21646052 agagcagctctccaatccactatgatgaaagtgttaaaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagacctagattctacccat 21646150  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  21646151 ttgtgtttccccactctcacaatatgaaccctaaaa 21646186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18408809 - 18408943
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   || | | ||||| |||||||  |||||  ||||| |||||||| |    
T  18408809 agagcagctctccaatccagtatgatgaaagtgttacaaagggttacaagaaaaataacttgcaagc-ttacacaagaacaagtcctagtttctacccat 18408907  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  18408908 ttgtgtttccccactctcacaatatgaaccctaaaa 18408943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18413685 - 18413819
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||  | ||||| |||||||  |||||  ||||| |||||||| |    
T  18413685 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagattgcaagc-ttacacaagaacaagtcctagtttctacccat 18413783  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  18413784 ttgtgtttccccactctcacaatatgaaccctaaaa 18413819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 21640039 - 21640101
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  21640039 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 21640101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 21646237 - 21646299
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  21646237 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 21646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 18408993 - 18409055
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||||    
T  18408993 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaaccc 18409055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 18413869 - 18413931
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| ||||| |||||||||| |||||||||||  ||| | |||||||||||||||||    
T  18413869 acccaaggtgtttacattgtttttccc-aacccaagagatcctcactacaaagacactcaaccc 18413931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29159849 - 29159900
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  29159849 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 29159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44848735 - 44848685
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  44848735 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 44848685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21983330 - 21983370
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaa 40  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  21983330 agagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 14737615 - 14737403
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  14737615 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacatatgaacaaaccctagattctaccctttg 14737516  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  14737515 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-t 14737418  T
Q  201 tggttccctcctttg 215  Q
    |||||||||||||||    
T  14737417 tggttccctcctttg 14737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 14742475 - 14742263
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  14742475 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacatatgaacaaaccctagattctaccctttg 14742376  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatt 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |    
T  14742375 gtattttcccactctcacactatgaaccctaaaacccaaagtgattacaatgtttttccc-aacccaagagacactctcaacaaagacacttaaccca-t 14742278  T
Q  201 tggttccctcctttg 215  Q
    |||||||||||||||    
T  14742277 tggttccctcctttg 14742263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11857020 - 11857235
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  11857020 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 11857119  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  11857120 ggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 11857217  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  11857218 ttggttccctcctttgct 11857235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22010736 - 22010521
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  22010736 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 22010637  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    | ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  22010636 gatatttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 22010539  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  22010538 ttggttccctcctttgct 22010521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 28184551 - 28184754
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  28184551 agagcagctctccaatctaatatgagaaagtgttacaaaaggttacaacactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 28184650  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatg--tttttcccaaacccaagagacactctcaacaaagacactcaaccca 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  28184651 gtattttcccactctcacactatgaaccctaaaacccaaggtgattactatgtttttttcccaaacccaagagacactctcaacaaagaccctcaaccca 28184750  T
Q  199 tttg 202  Q
    ||||    
T  28184751 tttg 28184754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28155608 - 28155412
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  28155608 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaatttagctttcaagctttacacatgaacaaaccctagat-ctaccctttg 28155510  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  28155509 gtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 28155412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 6438547 - 6438743
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  6438547 agagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttgtcaagctttacacatgaacaaaccctagaa-ctacccttt 6438644  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  6438645 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 6438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 16838790 - 16838977
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcc-ttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||| |||||| ||||||| ||||||||    
T  16838790 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagctttacacatgaacaaaccctagat-ctaccctt 16838888  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  16838889 tggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 16838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 6005463 - 6005650
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  ||||||||    
T  6005463 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctt 6005561  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  6005562 tggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 6005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 33330484 - 33330297
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| ||||||||    
T  33330484 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctt 33330386  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33330385 tggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 33335981 - 33335794
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| ||||||||    
T  33335981 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctt 33335883  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33335882 tggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 5674633 - 5674554
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  5674633 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 5674554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 5674821 - 5674685
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacat-aaacaaagcctagattctaccc 96  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| | ||||||| |||||  ||||||  ||||||||||||||    
T  5674821 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagctt-acacaagaaacaagacctagattctaccc 5674723  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||||| ||| |||||||||||| ||||||||||||||    
T  5674722 tttggtgtttccccactctcacaatatgaaccctaaaa 5674685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 5343628 - 5343710
Alignment:
Q  105 tttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| ||||  |||||||| |||||    
T  5343628 tttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagattcactctcatcaaag 5343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5757529 - 5757479
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  5757529 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 5757479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 35101 - 34886
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  35101 agagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaaccctagactctacccttt 35002  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  35001 ggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaacccaagagacactctcaacaaagacactcaaccca- 34904  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  34903 ttggttccctcctttgct 34886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7289965 - 7289750
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  7289965 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctatattctacccttt 7289866  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  7289865 ggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 7289768  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  7289767 ttggttccctcctttgct 7289750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 25328317 - 25328120
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  25328317 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 25328218  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    || ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  25328217 gtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcatcaaagacacacaacccat 25328120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 39784861 - 39784665
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  39784861 agagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 39784764  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||| |||||| ||||| ||| || |||||    
T  39784763 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagagactctctcatcaaaggcacacaccccat 39784665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 6311343 - 6311477
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  6311343 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacaca-agacaaaccctagattctaccctt 6311441  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||| ||| ||||||||||||  |||||||||||||    
T  6311442 tggtgtttccccactctcacaagatgaaccctaaaa 6311477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 35745437 - 35745624
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  ||||||||    
T  35745437 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctt 35745535  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  35745536 tggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 35745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36979423 - 36979558
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||    
T  36979423 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccct 36979521  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    ||||| ||| |||||||||||| ||||||||||||||    
T  36979522 ttggtgtttccccactctcacaatatgaaccctaaaa 36979558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 10684303 - 10684116
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||    
T  10684303 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctt 10684205  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  10684204 tggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 10684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30655692 - 30655827
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||    
T  30655692 agagcagctctccaatctaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccct 30655790  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    ||||| ||| |||||||||||| ||||||||||||||    
T  30655791 ttggtgtttccccactctcacaatatgaaccctaaaa 30655827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 6311532 - 6311613
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6311532 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttgct 6311613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 33037857 - 33037724
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||||||||||| |||||||  |||||| |||||||||||||| |    
T  33037857 agagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattctacccat 33037759  T
Q  99 tggtattttcccactctcacactatgaaccctaaa 133  Q
      || ||| |||||||||||| |||||||||||||    
T  33037758 atgtgtttccccactctcacaatatgaaccctaaa 33037724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 18870613 - 18870477
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaagg-ttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccc 96  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||  |  |||| ||||||||| |||||  |||||| ||||||||||||||    
T  18870613 agagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagctt-acacaagaacaaaccctagattctaccc 18870515  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  18870514 tttggtatttccccactctcacaatatgaaccctaaaa 18870477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 18870424 - 18870345
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18870424 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 18870345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 30655880 - 30655959
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30655880 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 30655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 18853219 - 18853083
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaagg-ttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccc 96  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||  |  |||| ||||||||| |||||  |||||| |||||||| |||||    
T  18853219 agagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagctt-acacaagaacaaaccctagattttaccc 18853121  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  18853120 tttggtatttccccactctcacaatatgaaccctaaaa 18853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 10689003 - 10688924
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10689003 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 10688924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 18853030 - 18852951
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18853030 acccaaggtgattacaatatttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 18852951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 25328070 - 25327994
Alignment:
Q  122 atgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  25328070 atgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcatcaaagacacacaacccat 25327994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 4760126 - 4759991
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  ||||||||||||||     
T  4760126 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 4760028  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |  || ||| |||||||||||| ||||||||||||||    
T  4760027 tatgtgtttccccactctcacaatatgaaccctaaaa 4759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 33037671 - 33037592
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  33037671 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacgaagacactcaaccc-tttggttccctcctttg 33037592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 4759938 - 4759857
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgc 216  Q
    |||||||||||||||||||||||| || |||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||    
T  4759938 acccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccc-tttggttacctcctttgc 4759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 10689194 - 10689058
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccc- 96  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||||  ||  |||||||||||| |||||||  |||||  ||||||||||||||     
T  10689194 agagcagctctccaatccaatatgatgaaagtgttacagagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 10689096  T
Q  97 tttggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || | ||| |||||||||||| ||||||||||||||    
T  10689095 tatgttgtttccccactctcacaatatgaaccctaaaa 10689058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 1261820 - 1261758
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  1261820 acccaaggtgattacaatgtttttccc-aacccaagagaccctctctacaaagacactcaaccc 1261758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 36979611 - 36979689
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||| ||  |||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  36979611 acccaaggtgattacaatgttttccc--aacctaagagacactctctacaaagacactcaaccc-tttggttcccttctttg 36979689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 1262005 - 1261871
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||   ||||  |||||||||||||| |    
T  1262005 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagtacaagacctagattctacccat 1261907  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  1261906 ttgtgtttccccactctcacaatatgaaccctaaaa 1261871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 31071280 - 31071146
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  ||||| |||||||| |    
T  31071280 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcctagtttctacccat 31071182  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  31071181 ttgtgtttccccactctcacaatatgaaccctaaaa 31071146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 31071095 - 31071035
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaac 195  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||    
T  31071095 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6127267 - 6127318
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  6127267 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 6127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 26288121 - 26288183
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| ||| |||||||  ||||| ||||||||| |||||||    
T  26288121 acccaaggtgtttacaatgtttttccc-aactcaagagattctctctacaaagacattcaaccc 26288183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 26301378 - 26301440
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| ||| |||||||  ||||| ||||||||| |||||||    
T  26301378 acccaaggtgtttacaatgtttttccc-aactcaagagattctctctacaaagacattcaaccc 26301440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 26313372 - 26313434
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||||||| ||| |||||||  ||||| ||||||||| |||||||    
T  26313372 acccaaggtgtttacaatgtttttccc-aactcaagagattctctctacaaagacattcaaccc 26313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4456074 - 4456124
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  4456074 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 4456124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7412387 - 7412437
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  7412387 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 7412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 7412569 - 7412629
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    |||||||||| |||||||||||   || |||||||||||  ||||| |||||||||||||||||    
T  7412569 acccaaggtgtttacaatgttt---cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26403281 - 26403240
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag 41  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  26403281 agagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9224446 - 9224231
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  9224446 agagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaaccctagactctacccttt 9224347  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  9224346 ggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaacccaagagacactctcaacaaagacactcaaccca- 9224249  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  9224248 ttggttccctcctttgct 9224231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9229233 - 9229018
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  9229233 agagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaaccctagactctacccttt 9229134  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  9229133 ggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaacccaagagacactctcaacaaagacactcaaccca- 9229036  T
Q  200 ttggttccctcctttgct 217  Q
    ||||||||||||||||||    
T  9229035 ttggttccctcctttgct 9229018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 51520503 - 51520715
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  51520503 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 51520602  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  51520603 ggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 51520700  T
Q  200 ttggttccctccttt 214  Q
    |||||||||||||||    
T  51520701 ttggttccctccttt 51520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 45347856 - 45347658
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagac-tctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  45347856 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagacctctagccttcaagctttacacatgaacaaaccctagattctacccttt 45347757  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||| ||| || |||||    
T  45347756 ggtattttcccactctcacactatgaaccctaaaccccaaggtgattacaatgtttttccc-aacctaagagacactctcatcaaaggcacacaccccat 45347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3814070 - 3814266
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||    
T  3814070 agagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctaga-tctaccctttg 3814168  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||| || |||||    
T  3814169 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaagacacacaccccat 3814266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 45357335 - 45357138
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  45357335 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctagattctaccctttg 45357236  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  45357235 gtattttcccactctcacactatgaaccctaaaccccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 45357138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5732711 - 5732907
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||    
T  5732711 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctaga-tctaccctttg 5732809  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  5732810 gtattttcccactctcacactataaacccttaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 5732907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18855773 - 18855933
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  18855773 agagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 18855870  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaa 162  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  18855871 ggtattttcccactctcacactatgaacccacaatcccaaggtgattacaatgtttttcccaa 18855933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 24741986 - 24742121
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||    
T  24741986 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccct 24742084  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    ||||| ||| |||||||||||| ||||||||||||||    
T  24742085 ttggtgtttccccactctcacaatatgaaccctaaaa 24742121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 56146750 - 56146664
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagccta 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  56146750 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacccta 56146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 18712677 - 18712590
Alignment:
Q  128 cctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18712677 cctaaaacccaaggtgataacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgct 18712590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 29760687 - 29760821
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacat-aaacaaagcctagattctaccc 96  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||| ||||||| |||||  ||||||  ||||||||||||||    
T  29760687 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcctgcaagctt-acacaagaaacaagacctagattctaccc 29760785  T
Q  97 tttggtattttcccactctcacactatgaaccctaa 132  Q
    |||||| ||| |||||||||||||||||||||||||    
T  29760786 tttggtgtttccccactctcacactatgaaccctaa 29760821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 24742174 - 24742253
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  24742174 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 24742253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 29760874 - 29760954
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  29760874 acccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 29760954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31985685 - 31985635
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  31985685 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaaga 31985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16623344 - 16623293
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  16623344 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 16623293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36315280 - 36315230
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36315280 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36315230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36329489 - 36329439
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36329489 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36329439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22173234 - 22173019
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  22173234 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctacccttt 22173135  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  22173134 ggtgtttccccactctcctaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca- 22173037  T
Q  200 ttggttccctcctttgct 217  Q
    |||||||||| |||||||    
T  22173036 ttggttccctactttgct 22173019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18656481 - 18656677
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||    
T  18656481 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcattcaagctttacacatgaacaaaccctaga-tctaccctttg 18656579  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  18656580 gtattttcccactctcacactataaacccttaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 18656677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 28501748 - 28501613
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  || ||| ||||||||||||||||    
T  28501748 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccctt 28501649  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||| ||| |||||||||||| ||||||||||||||    
T  28501648 tggtgtttccccactctcacaatatgaaccctaaaa 28501613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 28503915 - 28503780
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  || ||| ||||||||||||||||    
T  28503915 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccctt 28503816  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    |||| ||| |||||||||||| ||||||||||||||    
T  28503815 tggtgtttccccactctcacaatatgaaccctaaaa 28503780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 2677126 - 2676939
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| ||||||||    
T  2677126 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctt 2677028  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2677027 tggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 2672970 - 2672783
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| ||||||||    
T  2672970 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctt 2672872  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||||||||||  ||||||||||||||| |||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2672871 tggtattttcccatcctcacactatgaaccttaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 24968153 - 24968340
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcc-ttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||| |||||| || |||| ||||||||    
T  24968153 agagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagctttacacatgaacaaacccgagat-ctaccctt 24968251  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  24968252 tggtactttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 7167290 - 7167425
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||    
T  7167290 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccct 7167388  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  7167389 ttggtatttccccactctcacaatatgaaccctaaaa 7167425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 8512263 - 8512450
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||    
T  8512263 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctt 8512361  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  8512362 tggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8512450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 8517143 - 8517330
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||    
T  8517143 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctt 8517241  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  8517242 tggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 7167478 - 7167558
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7167478 acccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 7167558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 28501560 - 28501480
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  28501560 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcatcccttttggttccctcctttg 28501480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 28503727 - 28503647
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28503727 acccaaggtgattacaatatttttcccaa-cccaagagacactctcaacaaagacactcaacccttttggttccctcctttg 28503647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 2671449 - 2671370
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2671449 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 2671370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 40372659 - 40372580
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  40372659 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 40372580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 8477598 - 8477674
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcct 212  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8477598 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcct 8477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 8738926 - 8738846
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgc 216  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  8738926 acccaaggtgattacaatgtttttcccaa-cccaagagatactctctacaaagacactcaaccca-ttggttccctcctttgc 8738846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8739114 - 8738982
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  ||||||||||||||     
T  8739114 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaatccctagattctaccca 8739016  T
Q  98 ttggtattttcccactctcacactatgaacccta 131  Q
    |  |||||| |||||||||||| |||||||||||    
T  8739015 tatgtatttccccactctcacaatatgaacccta 8738982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9091352 - 9091220
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  ||||||||||||||     
T  9091352 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaatccctagattctaccca 9091254  T
Q  98 ttggtattttcccactctcacactatgaacccta 131  Q
    |  |||||| |||||||||||| |||||||||||    
T  9091253 tatgtatttccccactctcacaatatgaacccta 9091220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 9091164 - 9091085
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 215  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  9091164 acccaaggtgattacaatgtttttccc-aacccaagagatactctctacaaagacactcaaccc-tttggttccctcctttg 9091085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8477408 - 8477545
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacac-ataaacaaagcctagattctaccc 96  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| | ||||| |||||| ||||||||  ||||||||||||||    
T  8477408 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagc-ttacacaataaacaagacctagattctaccc 8477506  T
Q  97 tttggtattt-tcccactctcacactatgaaccctaaaa 134  Q
    |||||| |||  |||||||||||| ||||||||||||||    
T  8477507 tttggtgtttcccccactctcacaatatgaaccctaaaa 8477545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 32475531 - 32475717
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  |||||||||    
T  32475531 agagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctacccttt 32475628  T
Q  100 ggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    | | | |||||||  ||||||||||||||||  || |||||| ||||||||||||| ||| || |||| ||||  |||||||| |||||    
T  32475629 gataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgttgttttcccaacctaagattcactctcatcaaag 32475717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 32480389 - 32480575
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  |||||||||    
T  32480389 agagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctaga-cctacccttt 32480486  T
Q  100 ggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    | | | |||||||  ||||||||||||||||  || |||||| ||||||||||||| ||| || |||| ||||  |||||||| |||||    
T  32480487 gataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgttgttttcccaacctaagattcactctcatcaaag 32480575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 32143367 - 32143501
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  |||||||||||||| |    
T  32143367 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagacctagattctacccat 32143465  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| ||||||||| || ||||||||||||||    
T  32143466 ttgtgtttccccactctctcaatatgaaccctaaaa 32143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40372846 - 40372712
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  |||||||||||||| |    
T  40372846 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagccctagattctacccat 40372748  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
      || ||| |||||||||| | ||||||||||||||    
T  40372747 atgtgtttccccactctcataatatgaaccctaaaa 40372712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 2671637 - 2671502
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||  | ||||| |||||||  | |||  ||||||||||||||     
T  2671637 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagattgcaagc-ttacacaagaccaagccctagattctaccca 2671539  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    |  || ||| |||||||||||| ||||||||||||||    
T  2671538 tatgtgtttccccactctcacaatatgaaccctaaaa 2671502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 26928642 - 26928507
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccct 97  Q
    |||||| |||||||||||| ||||| |||||||||||||| ||||||||||     |||| | ||||||| |||||  |||||  ||||||||||||||     
T  26928642 agagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaaaaaatagcttgcaagctt-acacaagaacaagacctagattctaccca 26928544  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaa 134  Q
    || || ||| |||||||||||| ||||||||||||||    
T  26928543 tttgtgtttccccactctcacaatatgaaccctaaaa 26928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 27453004 - 27453138
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  ||||  |||||||| |    
T  27453004 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaattcctattttctacccat 27453102  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| ||||||||| || ||||||||||||||    
T  27453103 ttgtgtttccccactctctcaatatgaaccctaaaa 27453138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 1306179 - 1306239
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaac 195  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||    
T  1306179 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaac 1306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6794754 - 6794704
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  6794754 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 6794704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8370527 - 8370477
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  8370527 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 8370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16264396 - 16264446
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  16264396 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 16264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27974993 - 27974943
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  27974993 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 27974943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 36029141 - 36029190
Alignment:
Q  3 agcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 50  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  36029141 agcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 36029190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 1305996 - 1306044
Alignment:
Q  3 agcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||| || || |||||||||||||| ||||||||||    
T  1305996 agcagctctccaatccactacgatgaaagtgttacaaagggttacaaga 1306044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 9681 - 9521
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  9681 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctaga-tctaccctttg 9583  T
Q  101 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaa 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9582 gtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaa 9521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 3845 - 3672
Alignment:
Q  42 gttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaagg 141  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3845 gttacaagactctagccttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaaccctaaaacccaagg 3747  T
Q  142 tgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 217  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3746 tgattacaatgttttt-cctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 3672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 409 - 605
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctacccttt 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  |||||||||    
T  409 agagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctacccttt 506  T
Q  100 ggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 199  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  507 ggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 605  T

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Target: scaffold0197 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 14348 - 14161
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||    
T  14348 agagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctt 14250  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  14249 tggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 14161  T

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Target: scaffold0197; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 19204 - 19017
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctt 98  Q
    |||||||||||||||| ||||||| ||  |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||| ||||||||    
T  19204 agagcagctctccaatacaatatgtgagtgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagat-ctaccctt 19106  T
Q  99 tggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||| |||||||  ||||||||||||||||  ||  ||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  19105 tggtaatttcccaacctcacactatgaacccataattccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 19017  T

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Target: scaffold0259 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 2290 - 2103
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcc-tagattctaccct 97  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| | ||||| || ||||| |||||||    
T  2290 agagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacaca-agacaaaaccatagat-ctaccct 2193  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2192 ttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 2103  T

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Target: scaffold0028 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 148995 - 148808
Alignment:
Q  1 agagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcc-tagattctaccct 97  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| | ||||| || ||||| |||||||    
T  148995 agagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacaca-agacaaaaccatagat-ctaccct 148898  T
Q  98 ttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    |||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  148897 ttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 148808  T

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Target: scaffold0009 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 176925 - 176829
Alignment:
Q  91 ctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 186  Q
    ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  176925 ctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 176829  T

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Target: scaffold0188 (Bit Score: 44; Significance: 3e-16; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 17818 - 17756
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  17818 acccaaggtgattacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 17756  T

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Target: scaffold0188; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 23911 - 23849
Alignment:
Q  134 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 197  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  23911 acccaaggtgattacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 23849  T

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Target: scaffold0188; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 18003 - 17869
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  | ||| |||||||| |    
T  18003 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcatagtttctacccat 17905  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  17904 ttgtgtttccccactctcacaatatgaaccctaaaa 17869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24096 - 23962
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagcctagattctaccctt 98  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| |||||||  |||||  | ||| |||||||| |    
T  24096 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtcatagtttctacccat 23998  T
Q  99 tggtattttcccactctcacactatgaaccctaaaa 134  Q
    | || ||| |||||||||||| ||||||||||||||    
T  23997 ttgtgtttccccactctcacaatatgaaccctaaaa 23962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8470 - 8420
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  8470 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 8420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44012 - 43962
Alignment:
Q  1 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 50  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  44012 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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