View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11306_high_7 (Length: 257)
Name: NF11306_high_7
Description: NF11306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11306_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 27475525 - 27475296
Alignment:
| Q |
14 |
agaaaaacacaaaaagcttgaaagctacaccgggaaggaagaggacatacgaacccc-aggacaatttgactgtaataacaggatcaaatgaaaagatta |
112 |
Q |
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| T |
27475525 |
agaaaaacacaaaaaacttgaaagccacaccgggaaggaagaggagatacgaacccccaggacaatttgactgtagtaacaggatcaaatgaaaagatta |
27475426 |
T |
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| Q |
113 |
agtatt-aggttcaaagttgaatcattatataccaaaaagtgtgagatcgaaatgtgagaaggtggaagcaaatagtttgagaaatgtaaagaaatagcg |
211 |
Q |
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| T |
27475425 |
aatattcaggttcaaagttgaatcattatataccaaaaagtgtgagatcgaaatgtgagaaggtggaagcaaatagtttgagaaatgtaaagaaatagcg |
27475326 |
T |
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| Q |
212 |
agagaatggaacattttagggggttggatg |
241 |
Q |
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| T |
27475325 |
agagaatggaacattttggggggttggatg |
27475296 |
T |
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