View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11306_low_11 (Length: 240)

Name: NF11306_low_11
Description: NF11306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11306_low_11
NF11306_low_11
[»] chr8 (15 HSPs)
chr8 (1-221)||(4380691-4380911)
chr8 (1-221)||(18816369-18816597)
chr8 (1-221)||(21514441-21514669)
chr8 (1-140)||(22723322-22723461)
chr8 (1-140)||(22366140-22366279)
chr8 (1-130)||(24239759-24239888)
chr8 (1-47)||(38184981-38185027)
chr8 (3-47)||(20494569-20494613)
chr8 (189-224)||(18834371-18834406)
chr8 (189-224)||(21399662-21399697)
chr8 (189-224)||(21794155-21794190)
chr8 (32-130)||(16002174-16002272)
chr8 (32-78)||(22321479-22321525)
chr8 (189-223)||(23884116-23884150)
chr8 (195-223)||(22610337-22610365)
[»] chr7 (23 HSPs)
chr7 (1-221)||(43745406-43745634)
chr7 (1-214)||(4690744-4690963)
chr7 (1-221)||(47095202-47095430)
chr7 (1-217)||(18874742-18874963)
chr7 (4-221)||(48212803-48213027)
chr7 (1-221)||(15575723-15575951)
chr7 (1-218)||(20252259-20252489)
chr7 (1-133)||(18079468-18079600)
chr7 (17-137)||(15307448-15307568)
chr7 (6-127)||(19070012-19070133)
chr7 (145-217)||(16186815-16186887)
chr7 (1-130)||(16383828-16383957)
chr7 (32-127)||(16368347-16368442)
chr7 (1-47)||(831919-831965)
chr7 (1-47)||(1197099-1197145)
chr7 (32-130)||(8563320-8563418)
chr7 (1-131)||(12192452-12192582)
chr7 (1-47)||(34958282-34958328)
chr7 (32-130)||(39291490-39291588)
chr7 (189-224)||(8930837-8930872)
chr7 (32-78)||(32494079-32494125)
chr7 (195-224)||(15720730-15720759)
chr7 (1-130)||(25124275-25124402)
[»] chr5 (8 HSPs)
chr5 (1-217)||(23199285-23199509)
chr5 (1-221)||(660540-660768)
chr5 (1-221)||(1627142-1627370)
chr5 (1-218)||(18744631-18744849)
chr5 (189-224)||(32607388-32607423)
chr5 (189-224)||(21398717-21398752)
chr5 (189-224)||(22111923-22111958)
chr5 (32-130)||(11763477-11763575)
[»] chr1 (10 HSPs)
chr1 (1-221)||(28476808-28477036)
chr1 (1-218)||(24719587-24719812)
chr1 (1-221)||(12710634-12710845)
chr1 (1-105)||(20836584-20836688)
chr1 (1-105)||(20822780-20822884)
chr1 (1-108)||(41931242-41931354)
chr1 (189-224)||(20588581-20588616)
chr1 (189-224)||(20593119-20593154)
chr1 (189-224)||(34392713-34392748)
chr1 (194-224)||(8306556-8306586)
[»] chr4 (18 HSPs)
chr4 (1-218)||(2424464-2424689)
chr4 (1-221)||(26445957-26446185)
chr4 (1-221)||(14630887-14631113)
chr4 (1-140)||(10237233-10237372)
chr4 (102-221)||(25513702-25513829)
chr4 (1-140)||(19622146-19622285)
chr4 (1-130)||(54363268-54363397)
chr4 (1-130)||(17375278-17375407)
chr4 (1-130)||(15213598-15213727)
chr4 (16-131)||(19080231-19080346)
chr4 (1-47)||(17142959-17143005)
chr4 (1-47)||(15747842-15747888)
chr4 (189-224)||(9622434-9622469)
chr4 (189-224)||(55583141-55583176)
chr4 (194-224)||(16296823-16296853)
chr4 (32-78)||(19559535-19559581)
chr4 (32-78)||(49071863-49071909)
chr4 (185-221)||(45314157-45314193)
[»] chr3 (26 HSPs)
chr3 (1-221)||(17208274-17208502)
chr3 (1-224)||(24546950-24547180)
chr3 (1-221)||(14520196-14520424)
chr3 (1-224)||(24549023-24549253)
chr3 (55-140)||(25103956-25104041)
chr3 (16-131)||(20420956-20421071)
chr3 (1-130)||(17758582-17758711)
chr3 (1-130)||(19059902-19060031)
chr3 (5-47)||(2247935-2247977)
chr3 (32-130)||(11402766-11402864)
chr3 (1-127)||(40038907-40039033)
chr3 (1-42)||(25104036-25104077)
chr3 (189-224)||(2841578-2841613)
chr3 (32-130)||(12539042-12539140)
chr3 (189-224)||(3527226-3527261)
chr3 (189-224)||(6156656-6156691)
chr3 (189-224)||(6159350-6159385)
chr3 (189-224)||(14442120-14442155)
chr3 (189-224)||(17669770-17669805)
chr3 (189-224)||(17684907-17684942)
chr3 (189-224)||(54875546-54875581)
chr3 (32-78)||(18970097-18970143)
chr3 (185-223)||(50350890-50350928)
chr3 (40-129)||(38375670-38375759)
chr3 (1-130)||(51961111-51961239)
chr3 (194-222)||(50755328-50755356)
[»] chr2 (10 HSPs)
chr2 (1-218)||(21369042-21369268)
chr2 (1-218)||(21315553-21315780)
chr2 (1-218)||(21335343-21335570)
chr2 (1-221)||(23610370-23610604)
chr2 (1-140)||(29114513-29114652)
chr2 (22-128)||(23165877-23165983)
chr2 (22-128)||(23577134-23577240)
chr2 (185-221)||(28652626-28652662)
chr2 (189-224)||(25584183-25584218)
chr2 (194-224)||(149576-149606)
[»] scaffold0162 (1 HSPs)
scaffold0162 (1-218)||(23959-24184)
[»] scaffold0203 (1 HSPs)
scaffold0203 (6-221)||(18014-18237)
[»] chr6 (11 HSPs)
chr6 (1-218)||(20410589-20410812)
chr6 (1-132)||(17856430-17856561)
chr6 (30-140)||(31160327-31160437)
chr6 (102-198)||(21686158-21686262)
chr6 (31-131)||(16386602-16386701)
chr6 (160-221)||(15998806-15998867)
chr6 (22-122)||(15515293-15515393)
chr6 (29-131)||(26520329-26520432)
chr6 (32-78)||(15889739-15889785)
chr6 (35-131)||(19175330-19175426)
chr6 (185-221)||(25601401-25601437)
[»] scaffold0231 (1 HSPs)
scaffold0231 (2-221)||(17595-17822)
[»] scaffold0878 (1 HSPs)
scaffold0878 (1-221)||(3496-3724)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-221)||(15689-15917)
[»] scaffold0032 (1 HSPs)
scaffold0032 (6-221)||(61921-62148)
[»] scaffold0414 (1 HSPs)
scaffold0414 (6-224)||(11232-11457)
[»] scaffold0853 (1 HSPs)
scaffold0853 (28-218)||(2533-2729)
[»] scaffold1186 (1 HSPs)
scaffold1186 (1-221)||(1772-1998)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-221)||(186270-186496)
[»] scaffold0183 (1 HSPs)
scaffold0183 (1-140)||(11123-11262)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-103)||(15928-16030)
scaffold0056 (96-221)||(18120-18253)
[»] scaffold0516 (2 HSPs)
scaffold0516 (1-103)||(7522-7624)
scaffold0516 (96-221)||(5379-5515)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-131)||(10939-11069)
[»] scaffold1278 (1 HSPs)
scaffold1278 (1-131)||(1499-1629)
[»] scaffold0452 (1 HSPs)
scaffold0452 (1-130)||(2760-2889)
[»] scaffold0331 (1 HSPs)
scaffold0331 (19-140)||(5774-5896)
[»] scaffold1204 (1 HSPs)
scaffold1204 (1-130)||(65-194)
[»] scaffold0347 (2 HSPs)
scaffold0347 (29-131)||(7051-7153)
scaffold0347 (93-137)||(4543-4587)
[»] scaffold0205 (1 HSPs)
scaffold0205 (17-131)||(8084-8197)
[»] scaffold0298 (1 HSPs)
scaffold0298 (1-47)||(322-368)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-47)||(10533-10579)
[»] scaffold1518 (1 HSPs)
scaffold1518 (22-131)||(275-384)
[»] scaffold0112 (1 HSPs)
scaffold0112 (55-140)||(13344-13429)
[»] scaffold0047 (1 HSPs)
scaffold0047 (37-130)||(19908-20001)
[»] scaffold0014 (1 HSPs)
scaffold0014 (16-125)||(113711-113819)
[»] scaffold0063 (1 HSPs)
scaffold0063 (32-130)||(44095-44193)
[»] scaffold0057 (1 HSPs)
scaffold0057 (32-130)||(6059-6157)
[»] scaffold0555 (1 HSPs)
scaffold0555 (189-224)||(8818-8853)
[»] scaffold0379 (1 HSPs)
scaffold0379 (189-224)||(10893-10928)
[»] scaffold0174 (1 HSPs)
scaffold0174 (189-224)||(19801-19836)
[»] scaffold0098 (1 HSPs)
scaffold0098 (189-224)||(40052-40087)
[»] scaffold1295 (1 HSPs)
scaffold1295 (32-78)||(282-328)
[»] scaffold0507 (1 HSPs)
scaffold0507 (32-78)||(1534-1580)
[»] scaffold0439 (1 HSPs)
scaffold0439 (195-225)||(12262-12292)
[»] scaffold0034 (1 HSPs)
scaffold0034 (32-78)||(80040-80086)


Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4380911 - 4380691
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4380911 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 4380812  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaattt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4380811 tttcaccaattaaattcacaataatcactttatacaaataggcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaattt 4380712  T
Q  201 ctataacatcaaaactaacaa 221  Q
    |||||||||||||||||||||    
T  4380711 ctataacatcaaaactaacaa 4380691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18816597 - 18816369
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  18816597 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacata 18816498  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||        |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18816497 tttcaccaattaaatccacaataatcactttatacaaatagacacttatgagtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 18816398  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  18816397 cctaatttctataacatcaaaactaacaa 18816369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 21514441 - 21514669
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  21514441 tatacatatatacataacttgagcatataatttcatcatcaacaacttaattaacatcaaattcacgtacccaaacattgcatcaaaacataagcacaaa 21514540  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||||         |||||||| |||||||||||||||||||||||||||||||||||||||    
T  21514541 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtataaaaagagattatacaaaagattatgaatgaaatctaac 21514640  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  21514641 cctaatttctataacatcaaaactaacaa 21514669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22723322 - 22723461
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||    
T  22723322 tatacatatatacataacttaagcatgtaaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattacatcaaaacataagcacgaa 22723421  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaata 140  Q
    ||||| ||||||| |||| |||||||||||||||||||||    
T  22723422 tttcatcaattaatttcataataatcactttatacaaata 22723461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22366140 - 22366279
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||||| ||    
T  22366140 tatacatatatacataacttgagcatgtaaattcatcatcaacaacttaattaacatcaaattcacatatccaaacattacatcaaagcataagcacgaa 22366239  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaata 140  Q
    ||||| ||||||| |||| |||||||||||||||||||||    
T  22366240 tttcatcaattaatttcataataatcactttatacaaata 22366279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 24239759 - 24239888
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| ||||||||||| ||||| |||| || |||||||| |||| |||||||  ||||||| ||||||||  ||    
T  24239759 tatacatataaacatatattgagcatgtaatttcatcatcaagaacttgattatcaacaaattcatatacccaaacatcacatcaaagcataagcatgaa 24239858  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    |||||  ||||||||||| |||||||||||    
T  24239859 tttcattaattaaattcaaaataatcactt 24239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38185027 - 38184981
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38185027 tatacatatatacataacttgagcatgtaaattcatcatcaataact 38184981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 20494613 - 20494569
Alignment:
Q  3 tacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||| |||||| |||||||||||||    
T  20494613 tacatatatacataacttgagcatgtaaatttatcatcaacaact 20494569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 18834371 - 18834406
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  18834371 taaccctaatttctataacatcaaaactaacaaaac 18834406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 21399662 - 21399697
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  21399662 taaccctaatttctataacatcaaaactaacaaaac 21399697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 21794155 - 21794190
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  21794155 taaccctaatttctataacatcaaaactaacaaaac 21794190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 16002174 - 16002272
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    ||||||| |||||| | ||||| ||||||||||| ||||||||||||  ||||| ||||  ||||  ||||||| ||| ||| | || |||||||||||    
T  16002174 ttcatcaacaacaattaaattatcatcaaattcatatactcaaacatatcatcataacaagagcatgaatttcaacaactaagtgcaaaataatcactt 16002272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 22321525 - 22321479
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| | ||||||||||||||| ||||| ||||||||    
T  22321525 ttcatcatcaacaattcaattaacatcaaattaacatattcaaacat 22321479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 23884116 - 23884150
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaa 223  Q
    |||| ||||||||||||||||||||||||||||||    
T  23884116 taaccctaatttctataacatcaaaactaacaaaa 23884150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 22610365 - 22610337
Alignment:
Q  195 taatttctataacatcaaaactaacaaaa 223  Q
    |||||||||||||||||||||||||||||    
T  22610365 taatttctataacatcaaaactaacaaaa 22610337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43745406 - 43745634
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  43745406 tatacatatatacataacttgaccatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaga 43745505  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43745506 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 43745605  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
    |||||||||||||||||||||||||||||    
T  43745606 tctaatttctataacatcaaaactaacaa 43745634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4690963 - 4690744
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4690963 tatacatatatacataacttgagcatgtaaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 4690864  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggct------tagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactc 194  Q
    ||||||||| ||||| || |||||||||||||||||||||| ||      ||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  4690863 tttcaccaactaaatccataataatcactttatacaaatagacttatgggtagaagtagaaaatgagattatacaaaagattatgaatgaaatctaaccc 4690764  T
Q  195 taatttctataacatcaaaa 214  Q
    ||||||||||||||||||||    
T  4690763 taatttctataacatcaaaa 4690744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 47095202 - 47095430
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47095202 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaa 47095301  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||        |  ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  47095302 tttcaccaattaaatccacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagagtttatacaaaagattatgaatgaaatttaac 47095401  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     |||||||||||||||||||| |||||||    
T  47095402 cctaatttctataacatcaaacctaacaa 47095430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 18874963 - 18874742
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  18874963 tatacatatatacataacttgagcatataaattcatcatcaataatttaattaacatcaaatttacatacccaaacattgcatcaaaacataaacacaaa 18874864  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaatagg--ctta---gaagtagaaaaagagattatacaaaagattatgaatgaaatctaactct 195  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||   | || ||||||||||||||||||||||||||||||||||||||||| ||    
T  18874863 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagaaaaagagattatacaaaagattatgaatgaaatctaaccct 18874764  T
Q  196 aatttctataacatcaaaacta 217  Q
    ||||||||||||||||||||||    
T  18874763 aatttctataacatcaaaacta 18874742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 48213027 - 48212803
Alignment:
Q  4 acatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaattt 103  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  48213027 acatatatatataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatc-aaacataagcccaaattt 48212929  T
Q  104 caccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactct 195  Q
    |||||||||||| |||||||||||||||||||||||||        |  |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  48212928 caccaattaaatccacaataatcactttatacaaatagacacttttgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccct 48212829  T
Q  196 aatttctataacatcaaaactaacaa 221  Q
    ||||||||||||||||||||||||||    
T  48212828 aatttctataacatcaaaactaacaa 48212803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 15575951 - 15575723
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||  ||    
T  15575951 tatacatatatacataacttgagcagataaattcatcatcaacaacttaattaacatcaaattaacatatccaaacattgcatcaaaacataagcatgaa 15575852  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15575851 tttcaccgattaaatccacaataatcactttatacaaataagcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 15575752  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  15575751 cctaatttctataacatcaaaactaacaa 15575723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 20252489 - 20252259
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatac-tcaaacattgcatcaaaacataagcacaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20252489 tatacatatatacataacttgagcatataaattcatcatcaacagcttaattaacatcaaattcacatacctcaaacattgcatcaaaacataagcacaa 20252390  T
Q  100 atttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagatt----atgaatgaaat 187  Q
    ||||||| |||||||| |||||||||||||||||||||||||||         |||||||||||||| |||||||||||||||||    |||||||||||    
T  20252389 atttcactaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaatagattatacaaaagattatgaatgaatgaaat 20252290  T
Q  188 ctaactctaatttctataacatcaaaactaa 218  Q
    ||||  |||||||||||||||| ||||||||    
T  20252289 ctaatcctaatttctataacattaaaactaa 20252259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 18079600 - 18079468
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| |||| ||| ||||||| ||||||||| ||    
T  18079600 tatacatatatacataacttgagcatgtaaattcatcatcaacaactcaattaacatcaatttcacatacccaaatattacatcaaagcataagcacgaa 18079501  T
Q  101 tttcaccaattaaattcacaataatcactttat 133  Q
    ||||| ||||||| |||| ||||||||| ||||    
T  18079500 tttcatcaattaatttcataataatcaccttat 18079468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 15307448 - 15307568
Alignment:
Q  17 acttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaatt 116  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||   ||||||| |  ||||||||||||||||||||||||    
T  15307448 acttgagcatgtaaattcaacatcaacaacttaattatcatcaaattcacatactcaaacatattatcaaaataagagcacaaatttcaccaattaaatt 15307547  T
Q  117 cacaataatcactttatacaa 137  Q
    ||||||||||||||| |||||    
T  15307548 cacaataatcactttctacaa 15307568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 19070012 - 19070133
Alignment:
Q  6 atatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttca 105  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||  ||||||||||||||| | || ||||| |||||||    
T  19070012 atatatatataacttgagcatgtaatttcatcatcaacaacttaattaccatcaaattcatatatccaaacattgcatcaacatatgagcacgaatttca 19070111  T
Q  106 ccaattaaattcacaataatca 127  Q
    ||||||||||||||||| ||||    
T  19070112 ccaattaaattcacaatgatca 19070133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 16186815 - 16186887
Alignment:
Q  145 tagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaatttctataacatcaaaacta 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16186815 tagaagaagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaacta 16186887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 16383828 - 16383957
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| | |||  |||||||| ||| ||||||||||||||||| |||| || |||||||| |||| |||||||  ||||||| ||||||||  ||    
T  16383828 tatacatataaaaatatattgagcatgtaatttcatcatcaacaacttgattatcaacaaattcatatacccaaacatcacatcaaagcataagcatgaa 16383927  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||||| |||||||||  | |||||||||||    
T  16383928 tttcatcaattaaatataaaataatcactt 16383957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 16368442 - 16368347
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatca 127  Q
    ||||||||||| ||||||||  ||||||||||||||||  |||||||| ||||||  ||||||||| ||||||| |||||||| ||| ||||||||    
T  16368442 ttcatcatcaataacttaatccacatcaaattcacatatccaaacattacatcaaggcataagcacgaatttcatcaattaaagtcataataatca 16368347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 831965 - 831919
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  831965 tatacatatatacataacttgagcatgtaaattcatcatcaacaact 831919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1197145 - 1197099
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  1197145 tatacatatatacataacttgagcatgtaaattcatcatcaacaact 1197099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 8563418 - 8563320
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    ||||||| |||||| | ||||| ||||||||||| ||||||||||||  ||||| ||||  ||||||||||||| ||| | | ||||||||||||||||    
T  8563418 ttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcatcataacaagagcacaaatttcaacaactgagttcacaataatcactt 8563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12192452 - 12192582
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||| ||||||| ||| | | ||||| ||| |||| ||||||| ||||||||| ||||||||||| |||| ||||||| ||| ||||| |  ||||| ||    
T  12192452 tatatatatatatatatcattagcatgtaatttcaacatcaactacttaattatcatcaaattcatatacccaaacatagcaccaaaataagagcacgaa 12192551  T
Q  101 tttcaccaattaaattcacaataatcacttt 131  Q
    ||||   || |||||||||||||||||||||    
T  12192552 tttccaaaaataaattcacaataatcacttt 12192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34958282 - 34958328
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||    
T  34958282 tatacatatatatctaacttgagcatgtaaattcatcatcaacaact 34958328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 39291588 - 39291490
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    |||||||||||||| | ||||| ||||||||| ||||||||||||||  ||  | ||||| ||||| |||||||  | |||  ||||||||||||||||    
T  39291588 ttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcactt 39291490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 8930872 - 8930837
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  8930872 taaccctaatttctataacatcaaaactaacaaaac 8930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 32494125 - 32494079
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| ||| ||||||||||||| ||||| ||||||||    
T  32494125 ttcatcatcaacaatttatttaacatcaaattaacatattcaaacat 32494079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 15720730 - 15720759
Alignment:
Q  195 taatttctataacatcaaaactaacaaaac 224  Q
    ||||||||||||||||||||||||||||||    
T  15720730 taatttctataacatcaaaactaacaaaac 15720759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 25124275 - 25124402
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| ||||   ||||||||  || ||||||||||||||||| |||| ||  ||||||| |||| |||||||  |||| || ||| ||||| ||    
T  25124275 tatacatataaacatgtattgagcatgcaatttcatcatcaacaacttgattatca-aaaattcatatacccaaacatcacatc-aagcatgagcacgaa 25124372  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
     |||| |||||||||||  |||||||||||    
T  25124373 attcatcaattaaattcgaaataatcactt 25124402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23199509 - 23199285
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23199509 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaa 23199410  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23199409 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagaagaaaaagagattatacaaaagattatgaatgaaatctaac 23199310  T
Q  193 tctaatttctataacatcaaaacta 217  Q
     ||||||||||||||||||||||||    
T  23199309 cctaatttctataacatcaaaacta 23199285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 660540 - 660768
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  660540 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatatccaaacattgcatcaaaacataagcacaaa 660639  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    | ||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  660640 tctcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 660739  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     | ||||||||||||||||||||||||||    
T  660740 ccaaatttctataacatcaaaactaacaa 660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1627370 - 1627142
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1627370 tatacatatatagataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaa 1627271  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||| ||||        |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1627270 tttcaccaattaaatccacaataatcactttatacacatagacacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 1627171  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  1627170 cctaatttctataacatcaaaactaacaa 1627142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 18744631 - 18744849
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  18744631 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatgcccaaacattgcatcaaaacataagcacaaa 18744730  T
Q  101 tttcaccaattaaattcacaataatcac-tttatacaaataggcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaatt 199  Q
    ||||||||||||||| |||||||||||| | ||  ||  || |  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18744731 tttcaccaattaaatccacaataatcacatataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatt 18744830  T
Q  200 tctataacatcaaaactaa 218  Q
    |||||||||||||||||||    
T  18744831 tctataacatcaaaactaa 18744849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 32607423 - 32607388
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    ||||||||||||||||||||||||||||||||||||    
T  32607423 taactctaatttctataacatcaaaactaacaaaac 32607388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 21398752 - 21398717
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  21398752 taaccctaatttctataacatcaaaactaacaaaac 21398717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 22111923 - 22111958
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  22111923 taaccctaatttctataacatcaaaactaacaaaac 22111958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 11763575 - 11763477
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    ||||||| || ||||| ||||| |||||||||||  |||||||||||  ||||  ||||  ||||||||||||| ||| ||| | || |||||||||||    
T  11763575 ttcatcaacatcaactcaattatcatcaaattcatctactcaaacatatcatcgtaacaagagcacaaatttcaacaactaagtgcaaaataatcactt 11763477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 28477036 - 28476808
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  28477036 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacata 28476937  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||| ||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28476936 tttcatcaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 28476837  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  28476836 cctaatttctataacatcaaaactaacaa 28476808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 24719812 - 24719587
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  24719812 tatacatatatacataacttgaacatataaattcatcatcaacaacttaattaacatcaaattcacatacccacacattgcatcaaaatataagcacaaa 24719713  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| ||||||| |||||||||||||||||||         |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  24719712 tttcaccaattaaatccacaatagtcactttatacaaataggcacttatgggtagaagtagaaaaaaagattatacaaaagattatgaatgaaatttaac 24719613  T
Q  193 tctaatttctataacatcaaaactaa 218  Q
      ||||||||||||||||||||||||    
T  24719612 cttaatttctataacatcaaaactaa 24719587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 12710634 - 12710845
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||| |||| || |||||||||||| |||||||||||||||||||||||||| ||    
T  12710634 tatacatatatacataacttgaatatgtaaattcatcatcaacaacttatttaatattaaattcacatacccaaacattgcatcaaaacataagcacgaa 12710733  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaattt 200  Q
    ||||||||||||||||||||||||||||||       || ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  12710734 tttcaccaattaaattcacaataatcactt-------atggg--tagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccttaattt 12710824  T
Q  201 ctataacatcaaaactaacaa 221  Q
    |||||||||||||||||||||    
T  12710825 ctataacatcaaaactaacaa 12710845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 20836584 - 20836688
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||    
T  20836584 tatacatatatacataacttgagcatgtaaattcatcatcaagaacttaattaacatcaaattcacatacccaaacattacatcaaagcataagcacgaa 20836683  T
Q  101 tttca 105  Q
    |||||    
T  20836684 tttca 20836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 20822780 - 20822884
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||    
T  20822780 tatacatatatacataacttgagcatgtaaattcatcatcgagaacttaattaacatcaaattcacatacccaaacattacatcaaagcataagcacgaa 20822879  T
Q  101 tttca 105  Q
    |||||    
T  20822880 tttca 20822884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41931354 - 41931242
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaa-----acattgcatcaaaacataagc 95  Q
    |||| ||||||| ||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||  |||     ||||| ||||||||||||||     
T  41931354 tatatatatatatataacttgaacatgtaatttcatcatcaacaacttaattatcatcaaattcacatatccaaacattacattacatcaaaacataagt 41931255  T
Q  96 acaaatttcacca 108  Q
    || ||||||||||    
T  41931254 acgaatttcacca 41931242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 20588581 - 20588616
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  20588581 taaccctaatttctataacatcaaaactaacaaaac 20588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 20593119 - 20593154
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  20593119 taaccctaatttctataacatcaaaactaacaaaac 20593154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 34392713 - 34392748
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  34392713 taaccctaatttctataacatcaaaactaacaaaac 34392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 224
Target Start/End: Original strand, 8306556 - 8306586
Alignment:
Q  194 ctaatttctataacatcaaaactaacaaaac 224  Q
    |||||||||||||||||||||||||||||||    
T  8306556 ctaatttctataacatcaaaactaacaaaac 8306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 2424689 - 2424464
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2424689 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaa 2424590  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||||||||| |||    
T  2424589 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaatagattatacaaaagattatgaatgaaatcgaac 2424490  T
Q  193 tctaatttctataacatcaaaactaa 218  Q
     |||||||||||||||||||||||||    
T  2424489 cctaatttctataacatcaaaactaa 2424464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26445957 - 26446185
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26445957 tatacttatatacataacttgagaatataaattcatcatcaacaacttaattaacatcaaattcacatatccaaacattgcatcaaaacataagcacaaa 26446056  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||| ||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26446057 tttcaccaattaaatccacagtaatcactttatacaaataggcacttatgggtagaagtagaaaaagatattatacaaaagattatgaatgaaatctaac 26446156  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  26446157 cctaatttctataacatcaaaactaacaa 26446185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14630887 - 14631113
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||  ||    
T  14630887 tatacatatatacatatcttgagcatgtaaattcatcatcagcaacttaattaacatcaaattcaaatacccaaacatcgcatcaaaacataagcatgaa 14630986  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||| ||        |||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  14630987 tttcaccaattaaatccacaataatcactttatacaaataagcacttatggttagaattagaaaaa-agattata-aaaagattatgaacgaaatctaac 14631084  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  14631085 cctaatttctataacatcaaaactaacaa 14631113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 10237372 - 10237233
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||||  ||||||| ||||| ||| ||    
T  10237372 tatacatatatacataacttgagcatgtaaattcttcatcaacaacttaattaacatcaatttcacatacccaaacatcacatcaaagcataaccacgaa 10237273  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaata 140  Q
    ||||| ||||||| |||| |||||||||||||||||||||    
T  10237272 tttcatcaattaatttcataataatcactttatacaaata 10237233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 25513702 - 25513829
Alignment:
Q  102 ttcaccaattaaattcacaataatcactttatacaaataggct--------tagaagtagaaaaagagattatacaaaagattatgaatgaaatctaact 193  Q
    |||||||||| ||| |||||||||||||||||||||||||||         |||||||||||||| |||||||||||||||||||||||||||||||||     
T  25513702 ttcaccaatttaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaatagattatacaaaagattatgaatgaaatctaacc 25513801  T
Q  194 ctaatttctataacatcaaaactaacaa 221  Q
    ||||||||||||||||||||||||||||    
T  25513802 ctaatttctataacatcaaaactaacaa 25513829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 19622285 - 19622146
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| |||||||| |||||||| |||| ||  ||||| |||||| |||||||| ||||||| ||||||||| ||    
T  19622285 tatacatataaacatatattgagcatgtaatttcatcattaacaacttgattatcaataaattgacatacccaaacattacatcaaagcataagcacgaa 19622186  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaata 140  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  19622185 tttcatcaattaaattcataataatcactttatacaaata 19622146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 54363397 - 54363268
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| ||||||||||||||||| |||| || |||||||| |||| |||||||  ||||||| ||||||||| ||    
T  54363397 tatacatataaacatatattgagcatgtaatttcatcatcaacaacttgattatcaacaaattcatatacccaaacatcacatcaaagcataagcacgaa 54363298  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||||| |||||||||||| |||||||||||    
T  54363297 tttcatcaattaaattcaaaataatcactt 54363268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 17375407 - 17375278
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  ||||||| |||| |||||| |||||||||| |||| || |||||||| |||| |||||||  ||||||| ||||||||| ||    
T  17375407 tatacatataaacatatattgagcagataatttcatcctcaacaacttgattatcaacaaattcatatacccaaacatcacatcaaagcataagcacgaa 17375308  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||||| |||||||||||| |||||||||||    
T  17375307 tttcatcaattaaattcaaaataatcactt 17375278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 15213727 - 15213598
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| ||||||||||||||||| |||| || |||||||| |||| |||||||  ||||||| ||||||||| ||    
T  15213727 tatacatataaacatatattgagcatgtaatttcatcatcaacaacttgattatcaacaaattcatatacccaaacatcacatcaaagcataagcacgaa 15213628  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||| | |||||||||||| | |||||||||    
T  15213627 ttttatcaattaaattcaaactaatcactt 15213598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 19080346 - 19080231
Alignment:
Q  16 aacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaat 115  Q
    ||||| ||||| |||| ||| |||||| |||||||||| ||| ||||||| |||| ||||||||||||||| |||| | ||| ||||| ||||| |||||    
T  19080346 aacttaagcatgtaaagtcaacatcaataacttaattatcattaaattcatatacccaaacattgcatcaacacatgaacacgaatttaaccaaataaat 19080247  T
Q  116 tcacaataatcacttt 131  Q
    ||||||||||||||||    
T  19080246 tcacaataatcacttt 19080231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17142959 - 17143005
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  17142959 tatacatatatacataacttgagcatgtaaattcatcatcaacaact 17143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15747888 - 15747842
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  15747888 tatacatatatacataacttgagcatgtatattcatcatcaacaact 15747842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 9622434 - 9622469
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  9622434 taaccctaatttctataacatcaaaactaacaaaac 9622469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 55583141 - 55583176
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  55583141 taaccctaatttctataacatcaaaactaacaaaac 55583176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 224
Target Start/End: Original strand, 16296823 - 16296853
Alignment:
Q  194 ctaatttctataacatcaaaactaacaaaac 224  Q
    |||||||||||||||||||||||||||||||    
T  16296823 ctaatttctataacatcaaaactaacaaaac 16296853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 19559535 - 19559581
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| | ||||||||||||||| |||| |||||||||    
T  19559535 ttcatcatcaacaattcaattaacatcaaattaacatgctcaaacat 19559581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 49071863 - 49071909
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    ||||||||||| || | ||||||||||||||| ||||||||||||||    
T  49071863 ttcatcatcaataattcaattaacatcaaattaacatactcaaacat 49071909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 45314193 - 45314157
Alignment:
Q  185 aatctaactctaatttctataacatcaaaactaacaa 221  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  45314193 aatctaaccctaatctctataacatcaaaactaacaa 45314157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17208274 - 17208502
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17208274 tatacatatatacataacttgagcatataaaatcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaa 17208373  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||        |  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  17208374 tttcaccaattaaatccacaataatcactttatacaaatagacacttatgaatagaagaagaaaaagagattatacaaaagattatgaatgaaatctaac 17208473  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  17208474 cctaatttctataacatcaaaactaacaa 17208502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 24546950 - 24547180
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  24546950 tatacatatatacataacttgagcatgtaaattcatcatcaacaacttaattaacatcaaattcacatacccaaatattacattaaaacataagcacaaa 24547049  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24547050 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 24547149  T
Q  193 tctaatttctataacatcaaaactaacaaaac 224  Q
     ||||||||||||||||| |||||||||||||    
T  24547150 cctaatttctataacatc-aaactaacaaaac 24547180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14520196 - 14520424
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||    
T  14520196 tatacatatatacataacttaagcatataaattcatcatcaacaacttaattaacatcaaaatcacatatccaaacattgcatcaaaacataaacacaaa 14520295  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14520296 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgagtgaaatttaac 14520395  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||| ||||||||||||||||||||    
T  14520396 cctaatttttataacatcaaaactaacaa 14520424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 24549253 - 24549023
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  24549253 tatacatatatacataacttgagcatgtaaattcatcatcaacaacttaattaacatcaaattcacatacccaaatattgcattaaaacataagcacaaa 24549154  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||         |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  24549153 tttcaccaattaaatccacaataattactttatgcaaataggcacttatgggtagaagtagaaaaagagattgtacaaaatattatgaatgaaatctaac 24549054  T
Q  193 tctaatttctataacatcaaaactaacaaaac 224  Q
     ||||||||||||||||| |||||||||||||    
T  24549053 cctaatttctataacatc-aaactaacaaaac 24549023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 25104041 - 25103956
Alignment:
Q  55 catcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactttatacaaata 140  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||    
T  25104041 catcaaattcacatactcaaacattacatcaaaacataagcacgaatttcatcaattaatttcataataatcactttatacaaata 25103956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 20420956 - 20421071
Alignment:
Q  16 aacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaat 115  Q
    ||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||| |||| |||| |  ||||| ||  |||||| ||||||    
T  20420956 aacttaagcatgtaaattcaacatcaccaacttaattatcatcaaattcacatactcaaacatagcattaaaataagagcacgaaaatcaccatttaaat 20421055  T
Q  116 tcacaataatcacttt 131  Q
    ||||||||||||||||    
T  20421056 tcacaataatcacttt 20421071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 17758711 - 17758582
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| ||||||||||||||||| |||| || |||||||| |||| |||||||  ||||||| || |||||| ||    
T  17758711 tatacatataaacatatattgagcatgtaatttcatcatcaacaacttgattatcaacaaattcatatacccaaacatcacatcaaagcacaagcacgaa 17758612  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||||| ||||||| |||| |||||||||||    
T  17758611 tttcatcaattaacttcaaaataatcactt 17758582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 19060031 - 19059902
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| ||||||||||||||||| |||| || |||||||| |||| |||||||  ||||||| || |||||| ||    
T  19060031 tatacatataaacatatattgagcatgtaatttcatcatcaacaacttgattatcaacaaattcatatacccaaacatcacatcaaagcacaagcacgaa 19059932  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||||| ||||||| |||| |||||||||||    
T  19059931 tttcatcaattaacttcaaaataatcactt 19059902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 2247977 - 2247935
Alignment:
Q  5 catatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  2247977 catatatacataacttgagcatgtaaattcatcatcaacaact 2247935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 11402766 - 11402864
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    ||||||| |||||| | ||||| ||||||||||| ||||||||||||  ||  | || || ||||| ||||||| ||||||| ||||||||||||||||    
T  11402766 ttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcactataatatgagcacgaatttcaacaattaagttcacaataatcactt 11402864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 40039033 - 40038907
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||| ||| ||| ||||||||||||||||| |||| ||  ||||||| ||||  ||||||  ||||||| || || ||| ||    
T  40039033 tatacatataaacatatattgaacatgtaatttcatcatcaacaacttgattatcaataaattcatatacctaaacatcacatcaaagcacaaacacgaa 40038934  T
Q  101 tttcaccaattaaattcacaataatca 127  Q
    ||| | |||||||||||| ||||||||    
T  40038933 ttttatcaattaaattcaaaataatca 40038907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25104077 - 25104036
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaa 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  25104077 tatacatatatacataacttgagcatgtaaattcatcatcaa 25104036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 2841613 - 2841578
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    ||||||||||||||||||||||||||||||||||||    
T  2841613 taactctaatttctataacatcaaaactaacaaaac 2841578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 12539140 - 12539042
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    |||||||||||||| | ||||| || ||||||||||||||||| |||  ||  ||||||  ||||| ||||||| |||| ||  |||||||||||||||    
T  12539140 ttcatcatcaacaattcaattatcaacaaattcacatactcaaccatatcactaaaacaagagcacgaatttcaacaataaagctcacaataatcactt 12539042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 3527261 - 3527226
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  3527261 taaccctaatttctataacatcaaaactaacaaaac 3527226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 6156656 - 6156691
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  6156656 taaccctaatttctataacatcaaaactaacaaaac 6156691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 6159350 - 6159385
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  6159350 taaccctaatttctataacatcaaaactaacaaaac 6159385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 14442120 - 14442155
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  14442120 taaccctaatttctataacatcaaaactaacaaaac 14442155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 17669805 - 17669770
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  17669805 taaccctaatttctataacatcaaaactaacaaaac 17669770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 17684942 - 17684907
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  17684942 taaccctaatttctataacatcaaaactaacaaaac 17684907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 54875581 - 54875546
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  54875581 taaccctaatttctataacatcaaaactaacaaaac 54875546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 18970097 - 18970143
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  18970097 ttcatcatcaacaattcaattaacatcaaattaacatacttaaacat 18970143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 50350928 - 50350890
Alignment:
Q  185 aatctaactctaatttctataacatcaaaactaacaaaa 223  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  50350928 aatctaaccctaatctctataacatcaaaactaacaaaa 50350890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 38375759 - 38375670
Alignment:
Q  40 caacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcact 129  Q
    |||||| | ||||| |||||||||||  |||||||||||  ||||| ||||  ||||| ||||||| ||||||| | || ||||||||||    
T  38375759 caacaattcaattatcatcaaattcatgtactcaaacatatcatcataacaagagcacgaatttcaacaattaagtgcaaaataatcact 38375670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 51961239 - 51961111
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| ||||   ||||||||  || ||||||||||||||||| |||| |   ||||||| |||| |||||||  ||||||| ||| ||||| ||    
T  51961239 tatacatataaacatgtattgagcatgcaatttcatcatcaacaacttgattatcga-aaattcatatacccaaacatcacatcaaagcatgagcacgaa 51961141  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
     |||| ||||||||||   |||||||||||    
T  51961140 attcatcaattaaatttgaaataatcactt 51961111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 50755356 - 50755328
Alignment:
Q  194 ctaatttctataacatcaaaactaacaaa 222  Q
    |||||||||||||||||||||||||||||    
T  50755356 ctaatttctataacatcaaaactaacaaa 50755328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 166; Significance: 6e-89; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 21369042 - 21369268
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatac-tcaaacattgcatcaaaacataagcacaa 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21369042 tatacatatatacataacttgagcatataaattcatcaacaacaacttaattaacatcaaattcacatacctcaaacattgcatcaaaacataagcacaa 21369141  T
Q  100 atttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaa 191  Q
    |||||||||||||||| |||||||||||||||||||||||||        |  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  21369142 atttcaccaattaaatccacaataatcactttatacaaatagacatttatgggtagtagtagaaaaagagattatacaaaagattatgaatgaaatctaa 21369241  T
Q  192 ctctaatttctataacatcaaaactaa 218  Q
    | |||||||||||||||||||||||||    
T  21369242 ccctaatttctataacatcaaaactaa 21369268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21315780 - 21315553
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacata-ctc-aaacattgcatcaaaacataagcaca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  21315780 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacctcaaaacattgcatcaaaacataaggaca 21315681  T
Q  99 aatttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatcta 190  Q
    ||||||||||||||||| |||||||||||||||||||||||||        |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  21315680 aatttcaccaattaaatccacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatcta 21315581  T
Q  191 actctaatttctataacatcaaaactaa 218  Q
    ||  ||||||||||||||||||||||||    
T  21315580 acaataatttctataacatcaaaactaa 21315553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21335570 - 21335343
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacata-ctc-aaacattgcatcaaaacataagcaca 98  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||    
T  21335570 tatatatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaatttacatacctcaaaacattgcatcaaaacataaggaca 21335471  T
Q  99 aatttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatcta 190  Q
    |||||||||||||||||  ||||||||||||||||||||||||        |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  21335470 aatttcaccaattaaatctacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatcta 21335371  T
Q  191 actctaatttctataacatcaaaactaa 218  Q
    ||  ||||||||||||||||||||||||    
T  21335370 accataatttctataacatcaaaactaa 21335343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23610370 - 23610604
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  23610370 tatacatatatacataacttgagcatataaattcatcatcaacaaattaattaacattaaattcacatactcaaacattgcatcaaaacataagcaaaaa 23610469  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagaga------ttatacaaaagattatgaatgaaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| | |      |||||||||||||||||||| |||    
T  23610470 tttcaccaattaaattcacaataatcactttatacaaataggcacttatgggtagaagtagaaaaacataatcactttatacaaaagattatgaattaaa 23610569  T
Q  187 tctaactctaatttctataacatcaaaactaacaa 221  Q
    |||||| |||||||||||||||||||||| |||||    
T  23610570 tctaaccctaatttctataacatcaaaacaaacaa 23610604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29114513 - 29114652
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||| ||    
T  29114513 tatacatttatacataacttgagcatgtaaattcatcatcaacaacttaattaacatcaagttcacatacccaaacattacatcaaagcataagcacgaa 29114612  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaata 140  Q
    | |||  |||||| |||  |||||||||||||||||||||    
T  29114613 tgtcattaattaatttcgtaataatcactttatacaaata 29114652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 23165983 - 23165877
Alignment:
Q  22 agcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaa 121  Q
    ||||| |||||||| ||||||||||||||||| |||||| ||||||||| ||||||||  |||| || |  ||||| |||||||||||||||||||||||    
T  23165983 agcatgtaaattcaacatcaacaacttaattatcatcaatttcacatacccaaacattttatcacaataagagcacgaatttcaccaattaaattcacaa 23165884  T
Q  122 taatcac 128  Q
    |||||||    
T  23165883 taatcac 23165877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 23577240 - 23577134
Alignment:
Q  22 agcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaa 121  Q
    ||||| |||||||| ||||||||||||||||| |||||| ||||||||| ||||||||  |||| || |  ||||| |||||||||||||||||||||||    
T  23577240 agcatgtaaattcaacatcaacaacttaattatcatcaatttcacatacccaaacattttatcacaataagagcacgaatttcaccaattaaattcacaa 23577141  T
Q  122 taatcac 128  Q
    |||||||    
T  23577140 taatcac 23577134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 28652662 - 28652626
Alignment:
Q  185 aatctaactctaatttctataacatcaaaactaacaa 221  Q
    |||||||| ||||||||||||||||||||||||||||    
T  28652662 aatctaaccctaatttctataacatcaaaactaacaa 28652626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 25584218 - 25584183
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  25584218 taaccctaatttctataacatcaaaactaacaaaac 25584183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 224
Target Start/End: Complemental strand, 149606 - 149576
Alignment:
Q  194 ctaatttctataacatcaaaactaacaaaac 224  Q
    |||||||||||||||||||||||||||||||    
T  149606 ctaatttctataacatcaaaactaacaaaac 149576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 24184 - 23959
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24184 tatacatatatacataacttgagcatatgaattcatcatcaagaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaa 24085  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||| ||||        |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24084 tttcaccaattaaatccacaataatcactttatacatatagtcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 23985  T
Q  193 tctaatttctataacatcaaaactaa 218  Q
     |||||||||||||||||||||||||    
T  23984 cctaatttctataacatcaaaactaa 23959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 18237 - 18014
Alignment:
Q  6 atatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttca 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  18237 atatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaatttcc 18138  T
Q  106 ccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaa 197  Q
    ||||||||||||||||||||||||||||||||||| ||         |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||    
T  18137 ccaattaaattcacaataatcactttatacaaataagcacttatgggtagaagtaaaaaaagagattaaacaaaatattatgaatgaaatctaaccctaa 18038  T
Q  198 tttctataacatcaaaactaacaa 221  Q
    ||||||||||||||||||||||||    
T  18037 tttctataacatcaaaactaacaa 18014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 20410812 - 20410589
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20410812 tatacttatatacataactcgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaa 20410713  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||| |||||||    
T  20410712 tttcaccaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgagatctaac 20410613  T
Q  193 tctaatttctataacatcaaaactaa 218  Q
     |||||||||||  ||||||||||||    
T  20410612 cctaatttctat--catcaaaactaa 20410589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17856561 - 17856430
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||| | ||||||||| ||| |||||||||||||||| ||| |||||||||||||||||| |||||||| |||||||  ||||||| |||    
T  17856561 tatacatatatacacatcttgagcatgtaatttcatcatcaacaactcaatcaacatcaaattcacatacccaaacattacatcaaagtataagcataaa 17856462  T
Q  101 tttcaccaattaaattcacaataatcacttta 132  Q
    ||||| |||||||| ||| |||||||||||||    
T  17856461 tttcatcaattaaaatcataataatcacttta 17856430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 31160437 - 31160327
Alignment:
Q  30 aattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcact 129  Q
    |||||| |||| |||||  ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  31160437 aattcaacatctacaacacaattatcatcaaattcacatacttaaacattgcatcaaaacataagcacgaatttcaccaattataatcacaataatcact 31160338  T
Q  130 ttatacaaata 140  Q
    ||  |||||||    
T  31160337 tttcacaaata 31160327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 21686262 - 21686158
Alignment:
Q  102 ttcaccaattaaattcacaataatcactttatacaaataggct--------tagaagtagaaaaagagattatacaaaagattatgaatgaaatctaact 193  Q
    |||||||||| ||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||     
T  21686262 ttcaccaatttaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacc 21686163  T
Q  194 ctaat 198  Q
    |||||    
T  21686162 ctaat 21686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 16386602 - 16386701
Alignment:
Q  31 attcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    ||||| ||| ||||||||||||| ||||||||||| |||| ||||||||||||||| | |||||||| ||||||| |||||||| |||||||||||||||    
T  16386602 attcaacattaacaacttaattatcatcaaattcatatacccaaacattgcatcaacatataagcacgaatttcagcaattaaa-tcacaataatcactt 16386700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 15998806 - 15998867
Alignment:
Q  160 agattatacaaaagattatgaatgaaatctaactctaatttctataacatcaaaactaacaa 221  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  15998806 agattatacaaaagattatcaatgaaatctaaccctaatttctataacatcaaaactaacaa 15998867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 15515393 - 15515293
Alignment:
Q  22 agcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaa 121  Q
    ||||| |||||||| ||||||||||||||||| | ||||||||||||||  |||||||||||||| | |  ||||  |||||||| ||||||||||||||    
T  15515393 agcatgtaaattcaacatcaacaacttaattatcctcaaattcacatacctaaacattgcatcaacataacagcatgaatttcactaattaaattcacaa 15515294  T
Q  122 t 122  Q
    |    
T  15515293 t 15515293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 26520432 - 26520329
Alignment:
Q  29 aaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaatt-aaattcacaataatca 127  Q
    ||||||| || || ||||| ||||| ||||||||||||||||| |||| || ||||||||    ||||||||||||||||||| ||||||||||||||||    
T  26520432 aaattcaacaacatcaactcaattatcatcaaattcacatacttaaactttacatcaaaagtagagcacaaatttcaccaattaaaattcacaataatca 26520333  T
Q  128 cttt 131  Q
    ||||    
T  26520332 cttt 26520329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 15889785 - 15889739
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| | ||||| ||||||||| ||||||||||||||    
T  15889785 ttcatcatcaacaaatcaattatcatcaaattaacatactcaaacat 15889739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 19175330 - 19175426
Alignment:
Q  35 atcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcacttt 131  Q
    |||| |||||| | ||||| |||||| || | ||||||||||||  ||||| ||||  ||||||||||||| ||| ||| | || ||||||||||||    
T  19175330 atcaacaacaattcaattatcatcaattttatatactcaaacatatcatcataacaagagcacaaatttcaacaactaactgcaaaataatcacttt 19175426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 25601437 - 25601401
Alignment:
Q  185 aatctaactctaatttctataacatcaaaactaacaa 221  Q
    |||||||| |||||||||||||||| |||||||||||    
T  25601437 aatctaaccctaatttctataacatgaaaactaacaa 25601401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 17822 - 17595
Alignment:
Q  2 atacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  17822 atacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatacctaaacattgcatcaaaacataagcacaaat 17723  T
Q  102 ttcaccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaact 193  Q
    || ||||||||||| |||||||||||||||||||||||||        |  ||||||||||||||| |||| |||||||||||||||||||||| ||||     
T  17722 ttgaccaattaaatccacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagtgattgtacaaaagattatgaatgaaatataacc 17623  T
Q  194 ctaatttctataacatcaaaactaacaa 221  Q
    ||||||||||||||| ||||||||||||    
T  17622 ctaatttctataacagcaaaactaacaa 17595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3724 - 3496
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  3724 tatacatatatacataacttaagcatgtaaattcatcttcaacaacttaattaacatcaaattcacagacgcaaacattgcatcaaaacataagcacgaa 3625  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| | |||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3624 tttcaccaattaaatcctcaataatcactttatacaaataagcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatataac 3525  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  3524 cctaatttctataacatcaaaactaacaa 3496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 15917 - 15689
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||    
T  15917 tatacatatatacataacttgagcatgtaaattcatcatcaacaacataattaacatcaaatttacatacccaaacatttcatcaaaacataagcacgaa 15818  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaa--------taggcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||| |        || |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15817 tttcaccaattaaatccacaataatcactttatacatatattcacttatgtgtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 15718  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  15717 cctaatttctataacatcaaaactaacaa 15689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 62148 - 61921
Alignment:
Q  6 atatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttca 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||     
T  62148 atatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacacacccaaacattgcatcaaaacataagcacaaatttcc 62049  T
Q  106 ccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaa 197  Q
    |||||||||| |||||||||||||||||||||||| ||         ||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  62048 ccaattaaatccacaataatcactttatacaaataagcacttataggtagaagtagaaaaagagattaaacaaaagattatgaatgaaatctaaccctaa 61949  T
Q  198 tttc----tataacatcaaaactaacaa 221  Q
    ||||    ||||||||||||||||||||    
T  61948 tttctatatataacatcaaaactaacaa 61921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 224
Target Start/End: Complemental strand, 11457 - 11232
Alignment:
Q  6 atatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttca 105  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  11457 atatatgcataacttgaacatataagttcatcatcaacaacttaattaacatcaaattcacatacgtaaacattgcatcaaaacataagcac-aatttca 11359  T
Q  106 ccaattaaattcacaataatcactttatacaaatag--------gcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaa 197  Q
    |||||||||  |||||||||||||||||||||||||        |  |||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  11358 ccaattaaacccacaataatcactttatacaaatagacacttatgggtagaagaagaaaaagagattatacaaaagattatgaatgaaatctaaccctaa 11259  T
Q  198 tttctataacatcaaaactaacaaaac 224  Q
    ||| |||||||||||||||||||||||    
T  11258 tttatataacatcaaaactaacaaaac 11232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 2729 - 2533
Alignment:
Q  28 taaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatca 127  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2729 taaattcatcatcaacaatttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacaaatttcaccaattaaatccacaataatca 2630  T
Q  128 ctttat------acaaataggcttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactctaatttctataacatcaaaactaa 218  Q
    ||||||      |||  || |  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2629 ctttatacgtagacacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaa 2533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 1772 - 1998
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||  ||    
T  1772 tatacatatatacatatcttgagcatgtaaattcatcatcagcaacttaattaacatcaaattcaaatacccaaacatcgcatcaaaacataagcatgaa 1871  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||| ||        |||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  1872 tttcaccaattaaatccacaataatcactttatacaaataagcacttatggttagaattagaaaaa-agattata-aaaagattatgaacgaaatctaac 1969  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  1970 cctaatttctataacatcaaaactaacaa 1998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 186496 - 186270
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||  ||    
T  186496 tatacatatatacatatcttgagcatgtaaattcatcatcagcaacttaattaacatcaaattcaaatacccaaacatcgcatcaaaacataagcatgaa 186397  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaataggc--------ttagaagtagaaaaagagattatacaaaagattatgaatgaaatctaac 192  Q
    ||||||||||||||| |||||||||||||||||||||||| ||        |||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  186396 tttcaccaattaaatccacaataatcactttatacaaataagcacttatggttagaattagaaaaa-agattata-aaaagattatgaacgaaatctaac 186299  T
Q  193 tctaatttctataacatcaaaactaacaa 221  Q
     ||||||||||||||||||||||||||||    
T  186298 cctaatttctataacatcaaaactaacaa 186270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 11123 - 11262
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||| | ||||||||| ||| |||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||||  |||||| ||    
T  11123 tatacatatatacacatcttgagcatgtaatttcatcatcaacaacttaattatcattaaattcacatacccaaacattacatcaaaactgaagcacgaa 11222  T
Q  101 tttcaccaattaaattcacaataatcactttatacaaata 140  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  11223 tttcaccaattaaattcacaataatcacttttcacaaata 11262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15928 - 16030
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||    
T  15928 tatacatatatacataacttgagcatgtaaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaatataagcacgaa 16027  T
Q  101 ttt 103  Q
    |||    
T  16028 ttt 16030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 18120 - 18253
Alignment:
Q  96 acaaatttcaccaattaaattcacaataatcactttatacaaataggct--------tagaagtagaaaaagagattatacaaaagattatgaatgaaat 187  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||         ||||||||||||||||||||||||| |||||||||||||||||    
T  18120 acaaatttcaccaattaaatccacaataatcattttatacaaataagcacttatgggtagaagtagaaaaagagattatacagaagattatgaatgaaat 18219  T
Q  188 ctaactctaatttctataacatcaaaactaacaa 221  Q
    ||||| ||||||||||||| |||||||| |||||    
T  18220 ctaaccctaatttctataaaatcaaaaccaacaa 18253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7624 - 7522
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  7624 tatacatatacacataacttgaacatgtaaattcatcatcaacaacttaattaacatcaaattcacatacccaaacattgcatcaaaacataagcacgaa 7525  T
Q  101 ttt 103  Q
    |||    
T  7524 ttt 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 5515 - 5379
Alignment:
Q  96 acaaatttcaccaattaaattcacaataat---cactttatacaaataggc--tta------gaagtagaaaaagagattatacaaaagattatgaatga 184  Q
    |||||||||||||||||||  |||||||||   ||||||||||||||| ||  |||      ||||||||||| ||||||||||||||||||||||||||    
T  5515 acaaatttcaccaattaaacccacaataataatcactttatacaaataagcacttatgggttgaagtagaaaaggagattatacaaaagattatgaatga 5416  T
Q  185 aatctaactctaatttctataacatcaaaactaacaa 221  Q
    |||||||| ||||| |||||||||||||||| |||||    
T  5415 aatctaaccctaatatctataacatcaaaacgaacaa 5379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 11069 - 10939
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||||||| | ||||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||    
T  11069 tatacatatatacacatcttgagcatgtaatttcatcatcaacaactcaatcaacatcaaattcacatactcaaacattacatcaaagcataagcacgaa 10970  T
Q  101 tttcaccaattaaattcacaataatcacttt 131  Q
    ||||| |||||||| ||| ||||| ||||||    
T  10969 tttcatcaattaaaatcataataaccacttt 10939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1278 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1499 - 1629
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||| ||||||| ||| ||||||||| ||| ||||||| |||||||||||||| |||||||||||  ||  |||| || |||||||||||||||||| ||    
T  1499 tatatatatatatatatcttgagcatgtaatttcatcaacaacaacttaattatcatcaaattcatgtatccaaatatggcatcaaaacataagcacgaa 1598  T
Q  101 tttcaccaattaaattcacaataatcacttt 131  Q
    ||||| |||||||| ||||||||||||||||    
T  1599 tttcaacaattaaaatcacaataatcacttt 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2889 - 2760
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| ||||||||||||||||| |||| || |||||||| |||| |||||||  ||||||| ||||||||| ||    
T  2889 tatacatataaacatatattgagcatgtaatttcatcatcaacaacttgattatcaacaaattcatatacacaaacatcacatcaaagcataagcacgaa 2790  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||||| |||||||||||| |||||||||||    
T  2789 tttcatcaattaaattcaaaataatcactt 2760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 5896 - 5774
Alignment:
Q  19 ttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattca 118  Q
    |||| ||| ||| |||||| ||||||||||||||| ||||||| |||||||| |||||||| |||||||||| |||||| ||||||| || |||||||||    
T  5896 ttgaacatgtaatttcatcttcaacaacttaattatcatcaaactcacatacccaaacattacatcaaaacacaagcaccaatttcaacatttaaattca 5797  T
Q  119 caa-taatcactttatacaaata 140  Q
    ||| ||||||||||  |||||||    
T  5796 caattaatcacttttcacaaata 5774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 194 - 65
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaa 100  Q
    |||||||||| |||||  |||||||| ||| ||||||||||||||||| |||| || |||||||| |||| |||||||  ||||||| ||||||||| ||    
T  194 tatacatataaacatatattgagcatgtaatttcatcatcaacaacttgattatcaacaaattcatatacccaaacatcacatcaaagcataagcacgaa 95  T
Q  101 tttcaccaattaaattcacaataatcactt 130  Q
    ||| | |||||||||||| | |||||||||    
T  94 ttttatcaattaaattcaaactaatcactt 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 7153 - 7051
Alignment:
Q  29 aaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcac 128  Q
    ||||||| |||||| |||||||||| |||||||||||| |||  |||||| ||||||||| |  || || |||| |||||||||||||||||||||||||    
T  7153 aaattcaacatcaataacttaattatcatcaaattcacgtaccaaaacatagcatcaaaataagagtacgaattgcaccaattaaattcacaataatcac 7054  T
Q  129 ttt 131  Q
    |||    
T  7053 ttt 7051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 4543 - 4587
Alignment:
Q  93 agcacaaatttcaccaattaaattcacaataatcactttatacaa 137  Q
    ||||| |||||||||||||||||||| ||||||||| || |||||    
T  4543 agcacgaatttcaccaattaaattcataataatcacgttctacaa 4587  T

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Target: scaffold0205 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 8084 - 8197
Alignment:
Q  17 acttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaatt 116  Q
    ||||||||||  ||||||| ||| ||||||||||||| ||||||| |||||||| ||||||| |||  || | |  ||||| ||||||||||||| ||||    
T  8084 acttgagcatgcaaattcaacataaacaacttaattatcatcaaactcacatac-caaacatagcactaacataagagcacgaatttcaccaattgaatt 8182  T
Q  117 cacaataatcacttt 131  Q
    |||||||||||||||    
T  8183 cacaataatcacttt 8197  T

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Target: scaffold0298 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 322 - 368
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  322 tatacatatatacataacttgagcatgtaaattcatcatcaacaact 368  T

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Target: scaffold0180 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10533 - 10579
Alignment:
Q  1 tatacatatatacataacttgagcatataaattcatcatcaacaact 47  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10533 tatacatatatacataacttgagcatgtaaattcatcatcaacaact 10579  T

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Target: scaffold1518 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1518
Description:

Target: scaffold1518; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 275 - 384
Alignment:
Q  22 agcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaa 121  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||||||  |||| || | |  || | |  ||||||||||||||||||| |||||||||    
T  275 agcatgtaaattcaacatcaaaaacttaattatcatcaaattcacatatccaaaaatagaaataacataagagcacaaatttcaccaattgaattcacaa 374  T
Q  122 taatcacttt 131  Q
    ||| ||||||    
T  375 taaacacttt 384  T

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Target: scaffold0112 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 13344 - 13429
Alignment:
Q  55 catcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactttatacaaata 140  Q
    |||||||||||||||| |||||||  ||  ||||||  ||||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  13344 catcaaattcacatacccaaacatatcactaaaacaatagcacaaatttcaccaatggaattcacaataataactttttacaaata 13429  T

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Target: scaffold0047 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 20001 - 19908
Alignment:
Q  37 catcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    ||||||||| | ||||| |||||| ||||||||| |||||||  ||  ||||||| ||||| ||||||| ||||||| ||||||||||||||||    
T  20001 catcaacaattcaattatcatcaatttcacatacccaaacataacactaaaacatgagcacgaatttcaacaattaagttcacaataatcactt 19908  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 113711 - 113819
Alignment:
Q  16 aacttgagcatataaattcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaat 115  Q
    ||||||||||| ||||||||  |||||||||||||||| ||| ||||||| ||||  ||||||  |||||||| |  || || |||||||||| ||||||    
T  113711 aacttgagcatgtaaattcaatatcaacaacttaattatcat-aaattcatatacataaacataacatcaaaataagagaacgaatttcaccacttaaat 113809  T
Q  116 tcacaataat 125  Q
    ||||||||||    
T  113810 tcacaataat 113819  T

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Target: scaffold0063 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 44193 - 44095
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    |||||||||||||| | ||||| ||||||||| ||||||||||||||  ||  | ||||| ||||| |||||||   ||||  ||||||||||||||||    
T  44193 ttcatcatcaacaattcaattaccatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcactt 44095  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 6059 - 6157
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacattgcatcaaaacataagcacaaatttcaccaattaaattcacaataatcactt 130  Q
    |||||||||||||| | ||||| |||||| || ||||||||||||||  ||  | ||||| ||||||||||||| |||  || |||| |||||||||||    
T  6059 ttcatcatcaacaattcaattatcatcaatttaacatactcaaacatatcactacaacatgagcacaaatttcaacaagcaagttcataataatcactt 6157  T

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Target: scaffold0555 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 8853 - 8818
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  8853 taaccctaatttctataacatcaaaactaacaaaac 8818  T

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Target: scaffold0379 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 10893 - 10928
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  10893 taaccctaatttctataacatcaaaactaacaaaac 10928  T

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Target: scaffold0174 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 19801 - 19836
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  19801 taaccctaatttctataacatcaaaactaacaaaac 19836  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 40052 - 40087
Alignment:
Q  189 taactctaatttctataacatcaaaactaacaaaac 224  Q
    |||| |||||||||||||||||||||||||||||||    
T  40052 taaccctaatttctataacatcaaaactaacaaaac 40087  T

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Target: scaffold1295 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 282 - 328
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| | ||||| ||||||||| ||||||||||||||    
T  282 ttcatcatcaacaattcaattatcatcaaattaacatactcaaacat 328  T

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Target: scaffold0507 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 1580 - 1534
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| | ||||| ||||||||| ||||||||||||||    
T  1580 ttcatcatcaacaattcaattatcatcaaattaacatactcaaacat 1534  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 225
Target Start/End: Original strand, 12262 - 12292
Alignment:
Q  195 taatttctataacatcaaaactaacaaaact 225  Q
    |||||||||||||||||||||||||||||||    
T  12262 taatttctataacatcaaaactaacaaaact 12292  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 80040 - 80086
Alignment:
Q  32 ttcatcatcaacaacttaattaacatcaaattcacatactcaaacat 78  Q
    |||||||||||||| ||| ||||||||||||| ||||| ||||||||    
T  80040 ttcatcatcaacaatttatttaacatcaaattaacatattcaaacat 80086  T

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