View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11309A_low_10 (Length: 544)

Name: NF11309A_low_10
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11309A_low_10
NF11309A_low_10
[»] chr7 (50 HSPs)
chr7 (39-264)||(21681249-21681476)
chr7 (36-261)||(21627746-21627972)
chr7 (332-531)||(21714108-21714307)
chr7 (36-146)||(21740671-21740781)
chr7 (121-260)||(21991458-21991596)
chr7 (45-165)||(21704307-21704426)
chr7 (330-539)||(21788152-21788361)
chr7 (329-517)||(21651991-21652179)
chr7 (384-539)||(21646720-21646875)
chr7 (36-264)||(21689035-21689256)
chr7 (329-540)||(21628047-21628258)
chr7 (107-263)||(21622745-21622893)
chr7 (329-539)||(21704565-21704775)
chr7 (36-264)||(21791645-21791866)
chr7 (36-260)||(21713825-21714048)
chr7 (329-539)||(21785325-21785538)
chr7 (188-254)||(21791512-21791578)
chr7 (379-539)||(21681622-21681782)
chr7 (329-422)||(21763987-21764077)
chr7 (329-422)||(21771883-21771976)
chr7 (378-539)||(21808181-21808342)
chr7 (188-264)||(21639468-21639544)
chr7 (188-264)||(21663875-21663951)
chr7 (188-263)||(21651859-21651934)
chr7 (407-526)||(21745532-21745651)
chr7 (188-254)||(21788002-21788068)
chr7 (188-264)||(21704425-21704499)
chr7 (329-422)||(21725818-21725911)
chr7 (38-110)||(21651734-21651806)
chr7 (36-105)||(21784566-21784635)
chr7 (379-539)||(15713595-15713755)
chr7 (36-96)||(21663698-21663758)
chr7 (329-539)||(21664017-21664230)
chr7 (471-539)||(21623257-21623325)
chr7 (36-104)||(21725571-21725639)
chr7 (46-101)||(21784691-21784746)
chr7 (46-104)||(21771645-21771703)
chr7 (329-506)||(21992092-21992272)
chr7 (329-388)||(21741028-21741087)
chr7 (37-92)||(21991408-21991463)
chr7 (188-225)||(21771759-21771796)
chr7 (188-225)||(21785163-21785200)
chr7 (37-88)||(21622693-21622744)
chr7 (61-99)||(21787911-21787949)
chr7 (188-225)||(21725694-21725731)
chr7 (36-122)||(21639321-21639404)
chr7 (471-539)||(21764126-21764194)
chr7 (36-70)||(21791419-21791453)
chr7 (386-539)||(21791990-21792143)
chr7 (189-225)||(21740895-21740931)
[»] scaffold0182 (4 HSPs)
scaffold0182 (329-539)||(25232-25442)
scaffold0182 (36-104)||(34209-34277)
scaffold0182 (329-387)||(34456-34514)
scaffold0182 (188-225)||(34332-34369)


Alignment Details
Target: chr7 (Bit Score: 132; Significance: 3e-68; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 39 - 264
Target Start/End: Original strand, 21681249 - 21681476
Alignment:
Q  39 agcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaacaa 138  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||| |||    
T  21681249 agcaaagatccaatttccatgaattttacttttcttgtccattgagtaaagtgatagacattatatagtttgttctgaggacaagttgctttagtagcaa 21681348  T
Q  139 agaggacaggtataaaaaatatattaaagtgaagtgtaaca--nnnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaa 236  Q
    |||||||||||||||||||| |||||||||||||||| | |          |||||||||||||||||||||||||| |||||||||||||||||||| |    
T  21681349 agaggacaggtataaaaaatctattaaagtgaagtgtgagattttttttttaagcaagcatatttacttatcttgtttattaggtaaaggtttgagagca 21681448  T
Q  237 tgaaaatctaaagcactacactgagccc 264  Q
    |||||| |||||||||||| ||||||||    
T  21681449 tgaaaaactaaagcactaccctgagccc 21681476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 36 - 261
Target Start/End: Original strand, 21627746 - 21627972
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 135  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |     
T  21627746 aaaagcaacgatcctatttccatgaattttacttttcttgtccgttgagtaaagtgatggacattatatagtttgttctgaggacaagttactttagcag 21627845  T
Q  136 caaagaggacaggtataaaaaatatattaaag-tgaagtgtaaca-nnnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgaga 233  Q
      |||||||||||||| ||||||  ||||||| |||||||||| |         |||||||||||||||||||||||| |||||||||||||||||||||    
T  21627846 tgaagaggacaggtat-aaaaattgattaaagttgaagtgtaagattttgttttaagcaagcatatttacttatcttgctcattaggtaaaggtttgaga 21627944  T
Q  234 gaatgaaaatctaaagcactacactgag 261  Q
    | ||||||||||||||||||||||||||    
T  21627945 gcatgaaaatctaaagcactacactgag 21627972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 332 - 531
Target Start/End: Original strand, 21714108 - 21714307
Alignment:
Q  332 gatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcat 431  Q
    |||||||||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||   || | |    
T  21714108 gatggcatcccaaactattaaagaaaaatttgtggagctacaaaaatcaatgcaaacaccccaaaattcacgaccgaagatacaaagggtggttgaccgt 21714207  T
Q  432 ctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagt 531  Q
     ||| |||| |||||| |||||||  |||||||   || ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  21714208 ttcagaaatagaacaaattttgagaagcattactcacccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctgaagaaaggagagaagt 21714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 21740671 - 21740781
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  21740671 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagtgatggacattatatagtttgttatgaggacaagttactttagtaa 21740770  T
Q  136 caaagaggaca 146  Q
    |||||||||||    
T  21740771 caaagaggaca 21740781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 121 - 260
Target Start/End: Original strand, 21991458 - 21991596
Alignment:
Q  121 aagttactttagtaacaaagaggacaggtataaaaaatatattaaagtgaagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattagg 220  Q
    ||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  21991458 aagttactttagtagtaaagaggacaagtataaaaaatctattaaagtgaagtgtaacattttttt-aagcaagcatatttacttatcttgttcattagg 21991556  T
Q  221 taaaggtttgagagaatgaaaatctaaagcactacactga 260  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21991557 taaaggttcgagagaatgaaaatctaaagcactacactga 21991596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 45 - 165
Target Start/End: Original strand, 21704307 - 21704426
Alignment:
Q  45 gatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaacaaagagga 144  Q
    |||||| |||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  21704307 gatcctgtttccgagaattttacttttcttgtacattgagtaaagtgatggacattatata-tttgttctgaggacaagttactttagtaacaaagagga 21704405  T
Q  145 caggtataaaaaatatattaa 165  Q
    |||||||||||||||||||||    
T  21704406 caggtataaaaaatatattaa 21704426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 330 - 539
Target Start/End: Original strand, 21788152 - 21788361
Alignment:
Q  330 atgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatc 429  Q
    ||||||||||||||||||||||| |||||||||| | || ||||| ||||||||||||||||||||||||||||||| || ||||| |||||| ||||      
T  21788152 atgatggcatcccaaactattaatgaaaaatttgtggagttacaaaaatcaaagcaaacaccccaaaattcacgaccgaaaatacaaagggtggcagagt 21788251  T
Q  430 atctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaa 529  Q
    |||||| |||| ||| ||  ||||||  |||||||   || |||||| ||||  | ||||||||||||||||||||  ||||| ||||| ||||||||||    
T  21788252 atctcagaaatagaaaaaactttgagaagcattactcgcccaagttgttgtcggtaggtcctatccatcatgacaacacaaatttgaagttaggagagaa 21788351  T
Q  530 gttcaagctt 539  Q
    || |||||||    
T  21788352 gtacaagctt 21788361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 329 - 517
Target Start/End: Original strand, 21651991 - 21652179
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 428  Q
    ||||||||||||||||||||||||||||||||||| | | |||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |     
T  21651991 aatgatggcatcccaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaacaccccaaaattcacgaccaaagatacaaagggtgccacag 21652090  T
Q  429 catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaa 517  Q
     |||||| |||| |||  | |||||||   |||||||  || ||||| || ||| | ||||||||||||||||||||| ||||| ||||    
T  21652091 tatctcagaaatagaaacaattttgagaaacattacacccccaagtttgtttcaataggtcctatccatcatgacaatacaaatatgaa 21652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 384 - 539
Target Start/End: Original strand, 21646720 - 21646875
Alignment:
Q  384 caaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcat 483  Q
    |||||||||||||||||||||||||||||||| |||||| || |  |||||| |||| ||||||  ||||||| ||||||||  || ||||||||||||     
T  21646720 caaacaccccaaaattcacgaccaaagatacaaagggtgccacagtatctcagaaatagaacaaaatttgaggagcattacacccccaagttggtgtcaa 21646819  T
Q  484 ttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 539  Q
    | |||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  21646820 taggtcctatccatcatgacaatccaaagctgaagataggagagaaatacaagctt 21646875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 36 - 264
Target Start/End: Original strand, 21689035 - 21689256
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 135  Q
    ||||||||  |||| ||||||||||||||||||||||||  ||||||||| ||||  ||||| |    ||||| | || ||| |||||||||||||| |     
T  21689035 aaaagcaaatatcccttttccatgaattttacttttcttccccattgagttaagtggtggacgtg---tagttcgttccgagaacaagttactttagcag 21689131  T
Q  136 caaagaggacaggtataaaaaatatattaaagtg-aagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 234  Q
      |||||||||||||||||||  || |||||||| |||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  21689132 tgaagaggacaggtataaaaatcat-ttaaagtggaagtgtaatatttt----aagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 21689226  T
Q  235 aatgaaaatctaaagcactacactgagccc 264  Q
     |||||||||||||||||||||||||||||    
T  21689227 catgaaaatctaaagcactacactgagccc 21689256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 329 - 540
Target Start/End: Original strand, 21628047 - 21628258
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 428  Q
    ||||||||||||||||||||||||||||||||||| | || || || | |||||||||||||||| |||| |||||||||||||||| |||||| | |||    
T  21628047 aatgatggcatcccaaactattaaagaaaaatttgtggagttaaaaaattcaaagcaaacaccccgaaatgcacgaccaaagatacaaagggtggccgat 21628146  T
Q  429 catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagaga 528  Q
    ||||||| ||||  || |  ||||| |  | |||||   || ||||| |||||| | |||||||||||||||| || | |||||||||| ||||||||||    
T  21628147 catctcagaaataaaaaagattttgggaagtattactcacccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctgaacataggagaga 21628246  T
Q  529 agttcaagcttg 540  Q
    ||| ||||||||    
T  21628247 agtacaagcttg 21628258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 107 - 263
Target Start/End: Original strand, 21622745 - 21622893
Alignment:
Q  107 tttgctctgaggacaagttactttagtaacaaagaggacaggtataaaaaatatattaaagtgaagtgtaacannnnnnngaagcaagcatatttactta 206  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |        |||         |||||||    
T  21622745 tttgttctgaggacaagttactttagtaaaaaagaggacaggtataaaaaatctattaaagtgaagtgtgagatttttttaaagg--------ttactta 21622836  T
Q  207 tcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagcc 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21622837 tcttgttcattaggtaaaggtttgagagcatgaaaatctaaagcactacactgagcc 21622893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 329 - 539
Target Start/End: Original strand, 21704565 - 21704775
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 428  Q
    |||||||||||||||||||||||||||||||||||   || || || | |||||||||||||| | |||| |||||||||||||||| ||||||  |||     
T  21704565 aatgatggcatcccaaactattaaagaaaaatttgtcgagttaaaaaattcaaagcaaacacctccaaatgcacgaccaaagatacaaagggtgcaagag 21704664  T
Q  429 catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagaga 528  Q
     |||||| || | ||| ||  ||||||  |||||||   || ||||| |||||  | ||||||||||||||||||||||||| ||||||| |||||||||    
T  21704665 tatctcagaagtagaaaaaactttgagcagcattactcacccaagttagtgtcgataggtcctatccatcatgacaatccaactctgaagttaggagaga 21704764  T
Q  529 agttcaagctt 539  Q
    ||| |||||||    
T  21704765 agtacaagctt 21704775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 36 - 264
Target Start/End: Original strand, 21791645 - 21791866
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 135  Q
    ||||||||  |||| |||||||||||||||||||||||| |||||||||| || |  ||||| |    ||||| | || ||| |||||||||||||| |     
T  21791645 aaaagcaaatatcccttttccatgaattttacttttcttctccattgagttaactggtggacgtg---tagttcgttccgagaacaagttactttagcag 21791741  T
Q  136 caaagaggacaggtataaaaaatatattaaagtg-aagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 234  Q
      |||||||||||||||||||  | ||||||||| |||||||| |        |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  21791742 tgaagaggacaggtataaaaatca-attaaagtggaagtgtaatatttt----aagcaagcatatttacttatcttgttcagtaggtaaaggtttgaaag 21791836  T
Q  235 aatgaaaatctaaagcactacactgagccc 264  Q
     |||||||||||||||||||||||||||||    
T  21791837 catgaaaatctaaagcactacactgagccc 21791866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 36 - 260
Target Start/End: Original strand, 21713825 - 21714048
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 135  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||   |||||   |||||||| | || |||||||||||||||||| |     
T  21713825 aaaagcaaagatcttttttccatgaattttacttttcttgtccattgagtaaagcggtggac---atatagttcgttccgaggacaagttactttagcag 21713921  T
Q  136 caaagaggacaggtataaaaaatatattaaagt-gaagtgta--acannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgag 232  Q
      ||||||||| |||| |||||| ||||||||| ||| | ||  | |        ||| ||||| ||||||||| |||||||||||||||||||||||||    
T  21713922 tgaagaggacaagtat-aaaaatttattaaagtcgaaatttaagatagtttttttaagaaagcagatttacttaacttgttcattaggtaaaggtttgag 21714020  T
Q  233 agaatgaaaatctaaagcactacactga 260  Q
    || |||||||| ||||||||||||||||    
T  21714021 agcatgaaaatttaaagcactacactga 21714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 539
Target Start/End: Original strand, 21785325 - 21785538
Alignment:
Q  329 aatgatggcatcccaaacta---ttaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgaca 425  Q
    ||||||| ||||||||||||   || || ||||| ||| | ||||| || | |||||||||| ||||||||||||||||||||||||||| ||||||  |    
T  21785325 aatgatgacatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaccaaagatacaaagggtgcaa 21785424  T
Q  426 gatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggag 525  Q
    ||  |||| | |||| | | ||  ||||||  |||||||   || ||||| |||||| | |||||||||||||||||||||||||||||||||| |||||    
T  21785425 gagtatctaagaaataggaaaaactttgagaagcattactcacccaagttagtgtcaataggtcctatccatcatgacaatccaaatctgaagacaggag 21785524  T
Q  526 agaagttcaagctt 539  Q
    |||||| |||||||    
T  21785525 agaagtacaagctt 21785538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 21791512 - 21791578
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcacta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21791512 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagcatgaaaatctaaagcacta 21791578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 379 - 539
Target Start/End: Original strand, 21681622 - 21681782
Alignment:
Q  379 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 478  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||    || |||||||| ||||||  ||| ||| ||||||||  || ||||| ||    
T  21681622 caaatcaaacaccccaaaattcacgaccaaagatacaaagggtgccacggtatgtcaaaaatagaacaaaatttaaggagcattacagccccaagtttgt 21681721  T
Q  479 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 539  Q
    |||| | |||||||||||||||| |||| || |||| ||| |||||||||||| |||||||    
T  21681722 gtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagctt 21681782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 21763987 - 21764077
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtg 422  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||   ||||||||||||||||||||||||||||| |||||||| ||||||    
T  21763987 aatgatggcatcccaaactcttaaagaaaaatttgtggagctacaa---tcaaagcaaacaccccaaaattcacgacccaagatacaaagggtg 21764077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 21771883 - 21771976
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtg 422  Q
    ||||||||||||| ||||||||||||||||||||| | | |||||| |||||||||||| ||||||||||||| |||| |||||||| ||||||    
T  21771883 aatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaataccccaaaattcaagaccgaagatacaaagggtg 21771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 378 - 539
Target Start/End: Complemental strand, 21808342 - 21808181
Alignment:
Q  378 tcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttgg 477  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||| | ||  |||||| |||| |||||| | |||||  |||||||   || |||||||    
T  21808342 tcaaatcaaataccccaaaattcacgaccaaagatacaaagggtggctgagtatctcagaaatagaacaaatcttgagaagcattactcacccaagttgg 21808243  T
Q  478 tgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 539  Q
    | ||| | ||||||||||||||||  |||  |||||||||| |||||||||||| |||||||    
T  21808242 tatcaataggtcctatccatcatggaaatataaatctgaagttaggagagaagtacaagctt 21808181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 21639468 - 21639544
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagccc 264  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||| |||||||| ||||||||||||||||||||    
T  21639468 aagcaagcatatttacttatcttgttcattaggtaaagtttcaagagcatgaaaatttaaagcactacactgagccc 21639544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 21663875 - 21663951
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagccc 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| |||| |||||||    
T  21663875 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaaaaaaaatccaaagcagtacagtgagccc 21663951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 21651859 - 21651934
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagcc 263  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  21651859 aagcaagcatatttacttatcttgttaattaggtaaaggtttgtgagcatggaaatctagagcactacactgagcc 21651934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 407 - 526
Target Start/End: Original strand, 21745532 - 21745651
Alignment:
Q  407 aaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 506  Q
    ||||||||| ||||||  ||| ||||||| |||| |||||| |||||||  |||||||   || |||||||||||||| |||||||||||||||||||||    
T  21745532 aaagatacaaagggtggtagaccatctcataaatagaacaaattttgagaagcattactcacccaagttggtgtcattaggtcctatccatcatgacaat 21745631  T
Q  507 ccaaatctgaagataggaga 526  Q
    |||||||| |||| ||||||    
T  21745632 ccaaatctaaagacaggaga 21745651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 21788002 - 21788068
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcacta 254  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  21788002 aagcaagcatatttagttatcttgttcattaggtaaaggtttgagagcatgaaaaactaaagcacta 21788068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 21704425 - 21704499
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaaagcactacactgagccc 264  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  21704425 aagcaagcatatttagttatcttgttcattaggtaaaggttt--gagaatgaaaaactaaagcactacgctgagccc 21704499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 21725818 - 21725911
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtg 422  Q
    ||||||||||||| ||||||||||||||||||||| | | |||||| |||||||||||| | ||||||||||| |||| |||||||| ||||||    
T  21725818 aatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaatatcccaaaattcaagaccgaagatacaaagggtg 21725911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 21651734 - 21651806
Alignment:
Q  38 aagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttg 110  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||||    
T  21651734 aagcaaagatcctttttccatgaattttacatttcttgtccattgagtaaagtggtagacattatatagtttg 21651806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 21784566 - 21784635
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatata 105  Q
    ||||||||  ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21784566 aaaagcaaatatcctttttccgtgaattttacttttcttgtccaatgagtaaagtgatggacattatata 21784635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 379 - 539
Target Start/End: Original strand, 15713595 - 15713755
Alignment:
Q  379 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 478  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||   |||||| |||  | | || || |||| ||||||||   || ||||||||    
T  15713595 caaagcaaacaccccaaagttcacgaccaaagatacaaagggtgccaggctatctcagaaaaagtaaaaattatgagatgcattacgcacctaagttggt 15713694  T
Q  479 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 539  Q
     ||| | || |||||||||||||||||| ||||||| |||  ||| ||||||| |||||||    
T  15713695 ttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaagtacaagctt 15713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 21663698 - 21663758
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatgga 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||    
T  21663698 aaaagcaatgatcctatttccatgaattttacttttcttgtccattgagcaaagtgatgga 21663758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 539
Target Start/End: Original strand, 21664017 - 21664230
Alignment:
Q  329 aatgatggcatcccaaacta---ttaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgaca 425  Q
    ||||||||||||||||||||   || || ||||| ||| | ||||| || | |||||||||| |||||||| |||||||||||||||||| |||||| ||    
T  21664017 aatgatggcatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaagttcacgaccaaagatacaaagggtgcca 21664116  T
Q  426 gatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggag 525  Q
     |  |||||| |||  ||| ||  ||||||  | |||||   || |||||  ||||| | |||||||||||||||| |||| || |||||||| ||||||    
T  21664117 cacaatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggcaatacagatctgaagttaggag 21664216  T
Q  526 agaagttcaagctt 539  Q
     ||||| |||||||    
T  21664217 ggaagtacaagctt 21664230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 471 - 539
Target Start/End: Original strand, 21623257 - 21623325
Alignment:
Q  471 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 539  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  21623257 aagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagctt 21623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 21725571 - 21725639
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 104  Q
    ||||||||  ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  21725571 aaaagcaaatatcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 21725639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 21784691 - 21784746
Alignment:
Q  46 atcctttttccatgaattttacttttcttgtccattgagtaaagttatggacatta 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  21784691 atcctttttccgtgaattttacttttcttgtccattgagtaaagtgatgaacatta 21784746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 21771645 - 21771703
Alignment:
Q  46 atcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 104  Q
    ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  21771645 atcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 21771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 506
Target Start/End: Original strand, 21992092 - 21992272
Alignment:
Q  329 aatgatggcatcccaaacta---ttaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgaca 425  Q
    |||||||||||||||||||    || |||||||| ||| | ||||| || | |||||||||| |||||||||||||||| || ||||||| |||||| ||    
T  21992092 aatgatggcatcccaaacttcccttgaagaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaacacagatacaaagggtggca 21992191  T
Q  426 gatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 506  Q
    ||  ||||||||||| ||| |   ||||||  ||| |||   || || ||||||||| | |||||||||||||||| ||||    
T  21992192 gagtatctcaaaaatagaaaagactttgagaagcactactcacccaaattggtgtcaataggtcctatccatcatggcaat 21992272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 21741028 - 21741087
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaac 388  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||| ||| |||||||||    
T  21741028 aatgatggcatcccaaactattaaagaaaaaattgtggagctacaaaaattaaagcaaac 21741087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 21991408 - 21991463
Alignment:
Q  37 aaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagtta 92  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  21991408 aaagcaaatatcctttttccatgaatttcacttttcttgtctattgagtaaagtta 21991463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 21771759 - 21771796
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaag 225  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21771759 aagcaagcatatttacttatcttgttcattaggtaaag 21771796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 21785163 - 21785200
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaag 225  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21785163 aagcaagcatatttacttatcttgttcattaggtaaag 21785200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 21622693 - 21622744
Alignment:
Q  37 aaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaa 88  Q
    ||||||| ||| || ||||||||||||||||||||||||||||| |||||||    
T  21622693 aaagcaaagatactatttccatgaattttacttttcttgtccatcgagtaaa 21622744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 21787911 - 21787949
Alignment:
Q  61 attttacttttcttgtccattgagtaaagttatggacat 99  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21787911 attttacttttcttgtccattgagtaaagtgatggacat 21787949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 21725694 - 21725731
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaag 225  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21725694 aagcacgcatatttacttatcttgttcattaggtaaag 21725731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 21639321 - 21639404
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaa 122  Q
    |||||||| |||||||||| ||| |||||||||| | |||| |||||||||||||  |||||   |||||||||| | |||||||||    
T  21639321 aaaagcaaagatccttttttcattaattttacttattttgtacattgagtaaagtggtggac---atatagtttgttatgaggacaa 21639404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 539
Target Start/End: Original strand, 21764126 - 21764194
Alignment:
Q  471 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 539  Q
    |||||| ||||| | |||||||||||||||||||   || |||||||| |||||||||||| |||||||    
T  21764126 aagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagctt 21764194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 21791419 - 21791453
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttt 70  Q
    |||||||| ||||||||||||||||||||||||||    
T  21791419 aaaagcaaagatcctttttccatgaattttacttt 21791453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 539
Target Start/End: Original strand, 21791990 - 21792143
Alignment:
Q  386 aacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcattt 485  Q
    |||||||| || ||||  |||||||||||| |||||| ||||  |||||| |||  ||  || |||||||  ||||||||| || | ||| || ||| |     
T  21791990 aacacccccaagttcaaaaccaaagatacaaagggtggcagagtatctcagaaagagagaaaattttgagaagcattacatcccaaggtttgtatcaata 21792089  T
Q  486 ggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 539  Q
    ||||| |||||||||| || | || ||||| || |||||||||||| |||||||    
T  21792090 ggtcccatccatcatggcagtacagatctggagttaggagagaagtacaagctt 21792143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 21740895 - 21740931
Alignment:
Q  189 agcaagcatatttacttatcttgttcattaggtaaag 225  Q
    |||||||||||||||||||||| |||| |||||||||    
T  21740895 agcaagcatatttacttatcttcttcaataggtaaag 21740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 68; Significance: 4e-30; HSPs: 4)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 539
Target Start/End: Original strand, 25232 - 25442
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 428  Q
    |||||||||| |||||||| ||||||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||| || ||    
T  25232 aatgatggcagcccaaactcttaaagaaaaaattgaggagctacaaaaatcaaagcaaacaccccaaaattcaccacccaagatacaaagggtggcatat 25331  T
Q  429 catctcaaaaatcgaacaagttttgagg-tgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagag 527  Q
     | | || |||   | |||  |||||||  | | ||||  || |||||||||||| | |||||||||||||||||||||  |||||||||| ||||||||    
T  25332 taccgcagaaagataccaa-atttgaggaagtactacaaacccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaagttaggagag 25430  T
Q  528 aagttcaagctt 539  Q
    |||| |||||||    
T  25431 aagtacaagctt 25442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 34209 - 34277
Alignment:
Q  36 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 104  Q
    ||||||||  ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  34209 aaaagcaaatatcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 34277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 34456 - 34514
Alignment:
Q  329 aatgatggcatcccaaactattaaagaaaaatttgcgcagctacaacaatcaaagcaaa 387  Q
    ||||||||||||| ||||||||||||||||||||| | | |||||| ||||||||||||    
T  34456 aatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaa 34514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 34332 - 34369
Alignment:
Q  188 aagcaagcatatttacttatcttgttcattaggtaaag 225  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34332 aagcacgcatatttacttatcttgttcattaggtaaag 34369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University