View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11309A_low_102 (Length: 326)
Name: NF11309A_low_102
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11309A_low_102 |
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Alignment Details
Target: chr5 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 8 - 322
Target Start/End: Complemental strand, 14524201 - 14523887
Alignment:
| Q |
8 |
ttggtgttagcctatgcgtcaattatggctcaaatgtgggtcgtgatattatatacattacatataattaattcattttagtgacgattatgaagaaact |
107 |
Q |
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| T |
14524201 |
ttggtgttagcctatgcgtcaattatggctcaaatgtgggtcgtgatattatatacattacatataattaattcattttagtgacgattatgaagaaact |
14524102 |
T |
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| Q |
108 |
taaaagtatttcataacatcgaatctagaataacccaaaataaagttttttataaagtaacttgtataaagttttgcgaaccaacaaatttacgagtaac |
207 |
Q |
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| T |
14524101 |
taaaagtatttcataacatcgaatctagaataacccaaaataaagttttttataaagtaacttgtataaagttttgcgaaccaacaaatttacgagtaac |
14524002 |
T |
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| Q |
208 |
atgataatggtggtttgaacttattttgagatactcaagatctttgtctattcatgaaatcctcaaatcatgtaataacttaacaaaggacctttatatt |
307 |
Q |
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| T |
14524001 |
atgataatggtggtttgaacttattttgagatactcaagatctttgtctattcatgaaatcctcaaatcatgtaattacttaacaaaggacctttatatt |
14523902 |
T |
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| Q |
308 |
tgtagcaggtttttg |
322 |
Q |
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| T |
14523901 |
tgtagcaggtttttg |
14523887 |
T |
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