View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11309A_low_179 (Length: 262)

Name: NF11309A_low_179
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11309A_low_179
NF11309A_low_179
[»] chr3 (56 HSPs)
chr3 (68-262)||(17044856-17045050)
chr3 (68-262)||(41172339-41172533)
chr3 (69-253)||(22306552-22306736)
chr3 (73-262)||(17047016-17047205)
chr3 (73-262)||(49900620-49900809)
chr3 (73-262)||(17518846-17519035)
chr3 (73-262)||(17533708-17533897)
chr3 (69-262)||(17693957-17694150)
chr3 (100-262)||(40807886-40808048)
chr3 (73-262)||(17538996-17539185)
chr3 (69-256)||(11259327-11259514)
chr3 (100-262)||(44274308-44274470)
chr3 (69-262)||(35354492-35354685)
chr3 (100-262)||(40812723-40812885)
chr3 (115-262)||(50348041-50348188)
chr3 (73-249)||(14508749-14508926)
chr3 (100-251)||(10563609-10563760)
chr3 (73-262)||(15931481-15931669)
chr3 (104-251)||(10311428-10311575)
chr3 (69-163)||(17541423-17541517)
chr3 (125-217)||(35064566-35064658)
chr3 (85-222)||(11563654-11563792)
chr3 (100-220)||(19568208-19568328)
chr3 (100-220)||(33565018-33565139)
chr3 (100-222)||(42323971-42324094)
chr3 (100-246)||(9510916-9511062)
chr3 (100-246)||(9518891-9519037)
chr3 (100-200)||(13185846-13185947)
chr3 (100-200)||(16050879-16050979)
chr3 (100-199)||(24177736-24177835)
chr3 (100-220)||(35960928-35961049)
chr3 (73-152)||(15566744-15566823)
chr3 (69-222)||(45530572-45530725)
chr3 (103-200)||(11885560-11885657)
chr3 (69-121)||(50347604-50347656)
chr3 (207-262)||(5200277-5200332)
chr3 (204-262)||(35064684-35064742)
chr3 (100-168)||(36528851-36528919)
chr3 (117-196)||(37039005-37039085)
chr3 (99-222)||(49968858-49968981)
chr3 (73-137)||(53646032-53646096)
chr3 (77-152)||(50350793-50350867)
chr3 (73-130)||(6159427-6159484)
chr3 (100-181)||(12509350-12509431)
chr3 (69-130)||(14641517-14641578)
chr3 (100-152)||(15446868-15446920)
chr3 (99-152)||(22652773-22652826)
chr3 (100-152)||(17208524-17208576)
chr3 (100-131)||(5200243-5200274)
chr3 (100-144)||(2247650-2247694)
chr3 (100-168)||(3263963-3264031)
chr3 (69-130)||(3527124-3527187)
chr3 (69-130)||(12917273-12917336)
chr3 (100-152)||(14152399-14152451)
chr3 (100-152)||(16979912-16979964)
chr3 (100-152)||(48631332-48631383)
[»] chr7 (68 HSPs)
chr7 (69-262)||(12465229-12465422)
chr7 (69-256)||(13147441-13147628)
chr7 (68-262)||(8851127-8851321)
chr7 (69-262)||(12372164-12372357)
chr7 (69-256)||(32433558-32433745)
chr7 (69-262)||(12322899-12323092)
chr7 (69-253)||(11067367-11067551)
chr7 (69-256)||(12127132-12127319)
chr7 (73-262)||(16999323-16999515)
chr7 (99-262)||(20620176-20620339)
chr7 (95-255)||(20214044-20214204)
chr7 (100-262)||(14180398-14180560)
chr7 (100-262)||(20586242-20586404)
chr7 (100-262)||(46386088-46386250)
chr7 (104-251)||(10277228-10277375)
chr7 (100-255)||(24269947-24270102)
chr7 (69-152)||(43276713-43276796)
chr7 (100-222)||(48807325-48807448)
chr7 (100-200)||(35771441-35771542)
chr7 (69-162)||(44374833-44374926)
chr7 (69-162)||(44383698-44383791)
chr7 (100-224)||(47974820-47974944)
chr7 (100-199)||(12754612-12754711)
chr7 (72-152)||(19195611-19195691)
chr7 (100-222)||(15095637-15095759)
chr7 (72-131)||(18074619-18074678)
chr7 (99-229)||(25943041-25943171)
chr7 (100-200)||(4071771-4071872)
chr7 (100-200)||(14218895-14218996)
chr7 (100-200)||(16078281-16078382)
chr7 (73-129)||(19283079-19283135)
chr7 (94-256)||(33002057-33002211)
chr7 (100-222)||(8135238-8135359)
chr7 (69-135)||(14160825-14160891)
chr7 (97-170)||(13744655-13744728)
chr7 (142-222)||(13132363-13132443)
chr7 (100-222)||(13698638-13698761)
chr7 (100-222)||(15140143-15140265)
chr7 (72-130)||(58385-58443)
chr7 (91-152)||(4690654-4690715)
chr7 (100-181)||(10658851-10658932)
chr7 (100-200)||(15289056-15289157)
chr7 (100-221)||(15623950-15624070)
chr7 (150-220)||(12557853-12557923)
chr7 (95-181)||(36704566-36704652)
chr7 (69-152)||(38299748-38299833)
chr7 (69-130)||(13744477-13744540)
chr7 (100-152)||(16250222-16250274)
chr7 (100-152)||(29052182-29052234)
chr7 (140-220)||(41284963-41285043)
chr7 (91-130)||(25943289-25943328)
chr7 (69-152)||(32160169-32160252)
chr7 (100-130)||(8488094-8488124)
chr7 (100-130)||(8513753-8513783)
chr7 (142-200)||(36685187-36685245)
chr7 (69-118)||(14156361-14156410)
chr7 (91-152)||(21661257-21661317)
chr7 (100-193)||(30820151-30820243)
chr7 (91-152)||(43745656-43745717)
chr7 (100-144)||(831634-831678)
chr7 (100-144)||(1196814-1196858)
chr7 (100-152)||(3287744-3287796)
chr7 (100-199)||(15203132-15203230)
chr7 (100-152)||(16550005-16550057)
chr7 (100-152)||(16615605-16615657)
chr7 (100-152)||(18955330-18955382)
chr7 (100-152)||(20252182-20252234)
chr7 (100-144)||(34958569-34958613)
[»] chr6 (33 HSPs)
chr6 (69-262)||(7827862-7828055)
chr6 (69-262)||(23150256-23150449)
chr6 (68-262)||(19655199-19655393)
chr6 (72-252)||(18703464-18703648)
chr6 (72-252)||(18709399-18709583)
chr6 (68-252)||(27125445-27125629)
chr6 (100-262)||(15890712-15890874)
chr6 (100-250)||(27329981-27330131)
chr6 (100-250)||(27390721-27390871)
chr6 (101-201)||(24267800-24267900)
chr6 (103-224)||(18585733-18585854)
chr6 (100-256)||(28948470-28948627)
chr6 (100-218)||(18928614-18928733)
chr6 (100-239)||(19235037-19235175)
chr6 (100-255)||(30673402-30673550)
chr6 (69-118)||(17318135-17318184)
chr6 (99-218)||(19401028-19401147)
chr6 (69-152)||(20410481-20410564)
chr6 (189-255)||(19167926-19167992)
chr6 (99-175)||(27572121-27572198)
chr6 (100-200)||(31731904-31732005)
chr6 (73-135)||(23431420-23431482)
chr6 (100-161)||(15998880-15998941)
chr6 (69-130)||(19825455-19825516)
chr6 (100-181)||(24550168-24550249)
chr6 (69-120)||(25922033-25922084)
chr6 (69-152)||(13285748-13285833)
chr6 (100-170)||(19167853-19167923)
chr6 (100-152)||(12041620-12041672)
chr6 (100-222)||(23501601-23501724)
chr6 (91-130)||(10446239-10446278)
chr6 (95-152)||(23658089-23658146)
chr6 (100-152)||(15173453-15173505)
[»] scaffold1283 (1 HSPs)
scaffold1283 (72-262)||(440-630)
[»] chr4 (40 HSPs)
chr4 (69-262)||(25091543-25091736)
chr4 (72-262)||(53630446-53630636)
chr4 (79-262)||(16998415-16998598)
chr4 (69-262)||(10356405-10356598)
chr4 (78-262)||(11425833-11426017)
chr4 (100-262)||(15115112-15115274)
chr4 (73-262)||(19610214-19610403)
chr4 (69-262)||(42875687-42875880)
chr4 (100-261)||(37019561-37019722)
chr4 (104-251)||(6633541-6633688)
chr4 (104-251)||(46001535-46001682)
chr4 (100-220)||(9924085-9924206)
chr4 (68-152)||(10694213-10694297)
chr4 (68-152)||(10907979-10908063)
chr4 (69-152)||(12424259-12424342)
chr4 (100-217)||(14549695-14549812)
chr4 (100-199)||(19434559-19434658)
chr4 (69-152)||(25513851-25513934)
chr4 (100-181)||(15613061-15613142)
chr4 (69-130)||(19022366-19022427)
chr4 (100-222)||(9870444-9870568)
chr4 (73-152)||(9639010-9639089)
chr4 (100-218)||(11478653-11478772)
chr4 (69-152)||(33186903-33186986)
chr4 (69-135)||(40230323-40230389)
chr4 (100-200)||(21147-21248)
chr4 (100-181)||(51993532-51993613)
chr4 (187-239)||(26921708-26921760)
chr4 (73-135)||(33243267-33243329)
chr4 (91-152)||(2424378-2424439)
chr4 (99-152)||(35811375-35811428)
chr4 (100-152)||(15008963-15009015)
chr4 (100-152)||(16296938-16296990)
chr4 (100-199)||(21062593-21062693)
chr4 (93-130)||(10273405-10273442)
chr4 (99-144)||(17143246-17143291)
chr4 (100-156)||(14186955-14187010)
chr4 (100-152)||(15239816-15239868)
chr4 (100-144)||(15747557-15747601)
chr4 (100-152)||(40620532-40620584)
[»] chr1 (33 HSPs)
chr1 (69-262)||(19676601-19676794)
chr1 (71-262)||(21046020-21046211)
chr1 (73-256)||(16058287-16058469)
chr1 (68-262)||(20633599-20633796)
chr1 (100-262)||(42912939-42913101)
chr1 (100-200)||(13302853-13302954)
chr1 (100-224)||(24723351-24723475)
chr1 (100-256)||(51324400-51324556)
chr1 (100-224)||(7051922-7052046)
chr1 (100-255)||(21168831-21168985)
chr1 (69-200)||(22350668-22350795)
chr1 (69-130)||(20588660-20588721)
chr1 (69-130)||(20593198-20593259)
chr1 (69-152)||(28476703-28476786)
chr1 (69-135)||(41225423-41225489)
chr1 (69-135)||(41226676-41226742)
chr1 (100-200)||(42697735-42697836)
chr1 (100-200)||(45755471-45755572)
chr1 (100-190)||(4595853-4595944)
chr1 (100-222)||(7320594-7320716)
chr1 (99-224)||(44822020-44822145)
chr1 (69-130)||(8306628-8306689)
chr1 (69-130)||(12710889-12710950)
chr1 (100-181)||(21239049-21239130)
chr1 (100-152)||(46197745-46197797)
chr1 (100-152)||(51336479-51336531)
chr1 (97-170)||(45499374-45499446)
chr1 (100-152)||(12327743-12327795)
chr1 (100-152)||(29763632-29763684)
chr1 (99-130)||(22145665-22145696)
chr1 (140-200)||(11946392-11946453)
chr1 (96-168)||(16401897-16401967)
chr1 (100-152)||(50001476-50001528)
[»] chr8 (51 HSPs)
chr8 (69-262)||(42817876-42818069)
chr8 (69-256)||(19140661-19140847)
chr8 (100-262)||(20083638-20083800)
chr8 (75-255)||(39935982-39936165)
chr8 (100-262)||(6101753-6101915)
chr8 (110-262)||(5082222-5082374)
chr8 (91-262)||(5761424-5761594)
chr8 (104-262)||(6573060-6573218)
chr8 (104-251)||(37292606-37292753)
chr8 (104-251)||(6202677-6202824)
chr8 (153-262)||(20178581-20178692)
chr8 (100-254)||(20397510-20397656)
chr8 (100-256)||(22532132-22532288)
chr8 (100-256)||(22536817-22536973)
chr8 (69-152)||(18761448-18761531)
chr8 (85-190)||(20022025-20022131)
chr8 (100-222)||(31722493-31722616)
chr8 (100-200)||(17906849-17906949)
chr8 (104-200)||(39694281-39694377)
chr8 (100-222)||(45469219-45469342)
chr8 (69-135)||(21579175-21579241)
chr8 (69-147)||(22258275-22258353)
chr8 (69-130)||(36306019-36306080)
chr8 (71-130)||(18834444-18834503)
chr8 (69-152)||(22208269-22208352)
chr8 (100-222)||(22317911-22318033)
chr8 (69-131)||(23943795-23943857)
chr8 (69-135)||(29762837-29762903)
chr8 (91-152)||(4380608-4380669)
chr8 (100-192)||(23899987-23900080)
chr8 (100-200)||(36727038-36727139)
chr8 (69-120)||(12037133-12037184)
chr8 (99-170)||(36305837-36305908)
chr8 (138-200)||(42265546-42265609)
chr8 (99-200)||(17218653-17218755)
chr8 (100-181)||(19700131-19700213)
chr8 (100-181)||(23419411-23419493)
chr8 (100-176)||(22254741-22254818)
chr8 (100-200)||(23948214-23948315)
chr8 (69-130)||(22345186-22345249)
chr8 (69-130)||(22356846-22356909)
chr8 (100-152)||(26454708-26454760)
chr8 (100-131)||(17158963-17158994)
chr8 (100-131)||(19880843-19880874)
chr8 (100-167)||(22583660-22583727)
chr8 (100-131)||(23479103-23479134)
chr8 (100-167)||(23889784-23889851)
chr8 (100-130)||(12577901-12577931)
chr8 (100-130)||(22610267-22610297)
chr8 (91-148)||(21514695-21514752)
chr8 (99-144)||(38184695-38184740)
[»] scaffold0077 (2 HSPs)
scaffold0077 (70-262)||(34229-34421)
scaffold0077 (100-181)||(5921-6002)
[»] chr2 (41 HSPs)
chr2 (68-256)||(5031097-5031285)
chr2 (69-256)||(24780809-24780996)
chr2 (72-262)||(9975819-9976009)
chr2 (69-262)||(24436538-24436731)
chr2 (79-262)||(17307376-17307559)
chr2 (73-252)||(22251421-22251600)
chr2 (100-262)||(24516076-24516238)
chr2 (100-256)||(40912216-40912372)
chr2 (69-262)||(2523716-2523909)
chr2 (91-262)||(19201191-19201362)
chr2 (104-251)||(37270600-37270747)
chr2 (140-262)||(27484517-27484639)
chr2 (148-262)||(36841154-36841268)
chr2 (100-222)||(25142133-25142256)
chr2 (73-224)||(22501897-22502050)
chr2 (73-224)||(22509831-22509984)
chr2 (69-214)||(27852605-27852747)
chr2 (100-249)||(3539740-3539889)
chr2 (100-224)||(357809-357933)
chr2 (102-224)||(1383545-1383667)
chr2 (68-129)||(21369316-21369377)
chr2 (73-148)||(149474-149549)
chr2 (69-130)||(14179697-14179758)
chr2 (100-200)||(44072509-44072609)
chr2 (69-112)||(36841267-36841310)
chr2 (100-181)||(25046088-25046170)
chr2 (69-134)||(31521187-31521252)
chr2 (70-130)||(14183436-14183496)
chr2 (100-152)||(21080969-21081021)
chr2 (115-200)||(18390229-18390314)
chr2 (100-200)||(5986128-5986229)
chr2 (100-222)||(19358820-19358943)
chr2 (95-181)||(14694296-14694383)
chr2 (69-120)||(20916339-20916390)
chr2 (91-130)||(23801518-23801557)
chr2 (138-199)||(18388227-18388289)
chr2 (169-223)||(24884399-24884453)
chr2 (73-120)||(12626399-12626447)
chr2 (100-152)||(21315476-21315528)
chr2 (100-152)||(21335266-21335318)
chr2 (100-152)||(25184189-25184241)
[»] scaffold0737 (1 HSPs)
scaffold0737 (69-256)||(4683-4870)
[»] scaffold0001 (3 HSPs)
scaffold0001 (69-256)||(31890-32077)
scaffold0001 (69-256)||(37197-37384)
scaffold0001 (73-255)||(77584-77766)
[»] scaffold0064 (1 HSPs)
scaffold0064 (69-262)||(58636-58829)
[»] scaffold0407 (1 HSPs)
scaffold0407 (77-262)||(11251-11436)
[»] scaffold0080 (1 HSPs)
scaffold0080 (69-262)||(21762-21955)
[»] scaffold1633 (1 HSPs)
scaffold1633 (70-262)||(1095-1287)
[»] chr5 (28 HSPs)
chr5 (73-262)||(21300017-21300206)
chr5 (68-262)||(19921528-19921728)
chr5 (104-251)||(7484903-7485050)
chr5 (100-261)||(20566445-20566598)
chr5 (70-239)||(31622038-31622201)
chr5 (95-224)||(36508628-36508757)
chr5 (69-152)||(23199176-23199259)
chr5 (100-200)||(21617928-21618029)
chr5 (100-200)||(20469176-20469277)
chr5 (69-130)||(21398613-21398674)
chr5 (100-224)||(31456888-31457012)
chr5 (99-170)||(22111810-22111881)
chr5 (100-181)||(25249828-25249910)
chr5 (100-181)||(25313612-25313694)
chr5 (99-152)||(266038-266091)
chr5 (69-130)||(32607285-32607346)
chr5 (100-152)||(6551290-6551342)
chr5 (100-181)||(10954060-10954141)
chr5 (69-125)||(8503857-8503913)
chr5 (100-152)||(17011728-17011780)
chr5 (100-152)||(18744874-18744926)
chr5 (140-220)||(31251931-31252011)
chr5 (169-223)||(17876132-17876186)
chr5 (138-222)||(21405665-21405751)
chr5 (100-200)||(10774664-10774763)
chr5 (103-152)||(30616614-30616663)
chr5 (91-135)||(14025798-14025842)
chr5 (203-239)||(22111729-22111765)
[»] scaffold0111 (2 HSPs)
scaffold0111 (73-252)||(12506-12685)
scaffold0111 (103-262)||(5273-5432)
[»] scaffold1941 (1 HSPs)
scaffold1941 (100-262)||(28-190)
[»] scaffold1766 (1 HSPs)
scaffold1766 (100-262)||(696-858)
[»] scaffold0241 (2 HSPs)
scaffold0241 (100-262)||(3072-3234)
scaffold0241 (158-262)||(2454-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (100-262)||(13392-13554)
[»] scaffold0020 (2 HSPs)
scaffold0020 (100-262)||(168999-169161)
scaffold0020 (96-262)||(143501-143667)
[»] scaffold0019 (1 HSPs)
scaffold0019 (69-200)||(24100-24231)
[»] scaffold0334 (1 HSPs)
scaffold0334 (100-262)||(408-570)
[»] scaffold0026 (1 HSPs)
scaffold0026 (100-262)||(146613-146775)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-213)||(78154-78298)
[»] scaffold0632 (1 HSPs)
scaffold0632 (100-262)||(1055-1217)
[»] scaffold0004 (6 HSPs)
scaffold0004 (91-262)||(328279-328452)
scaffold0004 (99-253)||(75691-75839)
scaffold0004 (99-192)||(110133-110227)
scaffold0004 (99-255)||(72841-72989)
scaffold0004 (69-130)||(73109-73172)
scaffold0004 (89-126)||(75963-76000)
[»] scaffold0149 (2 HSPs)
scaffold0149 (100-239)||(29573-29711)
scaffold0149 (100-224)||(21539-21663)
[»] scaffold0047 (1 HSPs)
scaffold0047 (69-261)||(78955-79132)
[»] scaffold0113 (1 HSPs)
scaffold0113 (100-226)||(35418-35542)
[»] scaffold0956 (1 HSPs)
scaffold0956 (69-183)||(2524-2638)
[»] scaffold0285 (1 HSPs)
scaffold0285 (100-261)||(19652-19805)
[»] scaffold0037 (3 HSPs)
scaffold0037 (100-256)||(112966-113123)
scaffold0037 (99-218)||(81501-81620)
scaffold0037 (100-190)||(117807-117899)
[»] scaffold0230 (1 HSPs)
scaffold0230 (103-224)||(6688-6809)
[»] scaffold0431 (1 HSPs)
scaffold0431 (69-152)||(5633-5716)
[»] scaffold0213 (1 HSPs)
scaffold0213 (69-152)||(19207-19290)
[»] scaffold0203 (1 HSPs)
scaffold0203 (73-152)||(17913-17992)
[»] scaffold0112 (1 HSPs)
scaffold0112 (100-255)||(2793-2941)
[»] scaffold0628 (1 HSPs)
scaffold0628 (85-222)||(1043-1181)
[»] scaffold0174 (6 HSPs)
scaffold0174 (104-239)||(5183-5310)
scaffold0174 (104-239)||(11303-11430)
scaffold0174 (99-254)||(19605-19759)
scaffold0174 (69-152)||(5454-5537)
scaffold0174 (69-129)||(11639-11699)
scaffold0174 (69-130)||(19878-19939)
[»] scaffold0008 (1 HSPs)
scaffold0008 (100-221)||(135504-135625)
[»] scaffold0083 (2 HSPs)
scaffold0083 (100-224)||(10755-10877)
scaffold0083 (100-175)||(5045-5120)
[»] scaffold0853 (1 HSPs)
scaffold0853 (69-152)||(2423-2506)
[»] scaffold0032 (1 HSPs)
scaffold0032 (73-152)||(61821-61900)
[»] scaffold0156 (1 HSPs)
scaffold0156 (106-224)||(16532-16650)
[»] scaffold0802 (1 HSPs)
scaffold0802 (100-220)||(4709-4830)
[»] scaffold0379 (2 HSPs)
scaffold0379 (99-217)||(10741-10851)
scaffold0379 (69-130)||(10969-11030)
[»] scaffold0328 (1 HSPs)
scaffold0328 (73-130)||(18613-18670)
[»] scaffold0220 (1 HSPs)
scaffold0220 (100-200)||(19906-20006)
[»] scaffold0162 (1 HSPs)
scaffold0162 (69-130)||(23861-23922)
[»] scaffold0175 (1 HSPs)
scaffold0175 (100-222)||(8571-8694)
[»] scaffold0100 (1 HSPs)
scaffold0100 (104-239)||(26638-26767)
[»] scaffold0040 (1 HSPs)
scaffold0040 (100-224)||(106051-106175)
[»] scaffold0107 (1 HSPs)
scaffold0107 (73-120)||(13525-13572)
[»] scaffold0028 (1 HSPs)
scaffold0028 (101-222)||(3053-3174)
[»] scaffold0075 (1 HSPs)
scaffold0075 (100-200)||(60846-60947)
[»] scaffold0848 (1 HSPs)
scaffold0848 (150-222)||(2071-2143)
[»] scaffold0123 (1 HSPs)
scaffold0123 (100-222)||(7205-7329)
[»] scaffold0010 (1 HSPs)
scaffold0010 (100-200)||(126305-126404)
[»] scaffold0676 (1 HSPs)
scaffold0676 (73-152)||(2881-2960)
[»] scaffold0256 (1 HSPs)
scaffold0256 (108-170)||(1855-1917)
[»] scaffold0251 (1 HSPs)
scaffold0251 (100-217)||(20086-20202)
[»] scaffold0056 (1 HSPs)
scaffold0056 (100-197)||(67075-67173)
[»] scaffold1256 (1 HSPs)
scaffold1256 (91-152)||(2191-2252)
[»] scaffold0516 (1 HSPs)
scaffold0516 (91-148)||(5296-5353)
[»] scaffold0041 (1 HSPs)
scaffold0041 (105-154)||(5712-5761)
[»] scaffold0577 (1 HSPs)
scaffold0577 (100-200)||(9012-9111)
[»] scaffold0515 (1 HSPs)
scaffold0515 (100-152)||(5029-5081)
[»] scaffold0439 (1 HSPs)
scaffold0439 (144-223)||(12323-12403)
[»] scaffold0414 (1 HSPs)
scaffold0414 (70-130)||(11130-11190)
[»] scaffold0306 (1 HSPs)
scaffold0306 (100-152)||(5029-5081)
[»] scaffold0071 (1 HSPs)
scaffold0071 (100-152)||(15272-15324)
[»] scaffold0057 (1 HSPs)
scaffold0057 (100-152)||(69853-69905)
[»] scaffold0125 (1 HSPs)
scaffold0125 (69-120)||(28583-28634)
[»] scaffold0671 (1 HSPs)
scaffold0671 (100-181)||(4910-4992)
[»] scaffold0002 (1 HSPs)
scaffold0002 (100-181)||(398532-398614)
[»] scaffold0589 (1 HSPs)
scaffold0589 (100-200)||(4336-4437)
[»] scaffold0261 (1 HSPs)
scaffold0261 (187-236)||(6620-6669)
[»] scaffold0151 (1 HSPs)
scaffold0151 (100-200)||(31061-31160)
[»] scaffold0007 (1 HSPs)
scaffold0007 (100-200)||(158822-158922)
[»] scaffold0003 (1 HSPs)
scaffold0003 (104-181)||(96369-96446)
[»] scaffold0601 (1 HSPs)
scaffold0601 (99-131)||(195-227)
[»] scaffold0436 (1 HSPs)
scaffold0436 (100-152)||(8960-9012)
[»] scaffold0138 (2 HSPs)
scaffold0138 (100-152)||(21097-21149)
scaffold0138 (100-152)||(34112-34164)
[»] scaffold0042 (1 HSPs)
scaffold0042 (100-199)||(29340-29440)
[»] scaffold0031 (1 HSPs)
scaffold0031 (69-130)||(127310-127373)
[»] scaffold0878 (1 HSPs)
scaffold0878 (91-130)||(3413-3452)
[»] scaffold0505 (1 HSPs)
scaffold0505 (91-130)||(4958-4997)
[»] scaffold0308 (1 HSPs)
scaffold0308 (138-200)||(13392-13455)
[»] scaffold0180 (1 HSPs)
scaffold0180 (99-146)||(11635-11682)
[»] scaffold0070 (1 HSPs)
scaffold0070 (73-112)||(11193-11232)
[»] scaffold0859 (1 HSPs)
scaffold0859 (144-222)||(4612-4690)
[»] scaffold0116 (1 HSPs)
scaffold0116 (138-199)||(35501-35563)
[»] scaffold1128 (1 HSPs)
scaffold1128 (140-200)||(449-510)
[»] scaffold0819 (1 HSPs)
scaffold0819 (100-200)||(5319-5418)
[»] scaffold0298 (1 HSPs)
scaffold0298 (99-144)||(609-654)
[»] scaffold0065 (1 HSPs)
scaffold0065 (100-200)||(52544-52645)
[»] scaffold0061 (2 HSPs)
scaffold0061 (91-152)||(14577-14638)
scaffold0061 (91-152)||(23635-23696)
[»] scaffold0017 (1 HSPs)
scaffold0017 (103-152)||(26727-26776)
[»] scaffold0247 (1 HSPs)
scaffold0247 (100-152)||(1076-1128)
[»] scaffold0034 (1 HSPs)
scaffold0034 (100-152)||(29216-29268)


Alignment Details
Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 68 - 262
Target Start/End: Complemental strand, 17045050 - 17044856
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  17045050 tgagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 17044951  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  17044950 tgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattga 17044856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 41172339 - 41172533
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||    
T  41172339 tgagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttgtataactctgaaattgagtttagcatgt 41172438  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  41172439 tgtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattga 41172533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 69 - 253
Target Start/End: Original strand, 22306552 - 22306736
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  22306552 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 22306651  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtg 253  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  22306652 gtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 17047205 - 17047016
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  17047205 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17047106  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||  ||||||||||||||  | |||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||    
T  17047105 gttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaatccgttgaatttgtgtagaattga 17047016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 49900809 - 49900620
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||| |||||| |||| |||||||| |||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  49900809 aatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 49900710  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  49900709 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 49900620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 17518846 - 17519035
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    |||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||||||    
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  17518946 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 17519035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 17533708 - 17533897
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    |||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||||||    
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  17533808 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 17533897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 17694150 - 17693957
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||| || ||||||||| |||||||||||||||||||    
T  17694150 gagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttgtataattctaaaattgagtttagcatgtt 17694051  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||| | ||||||||||||||||||  ||||||||||||||| |||||    
T  17694050 gtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaatccgttgaatttgtgtagaattga 17693957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 40808048 - 40807886
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40808048 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40807949  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  40807948 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 40807886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 17539185 - 17538996
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||| ||| || ||||||||||||||||| |||| ||||||||||    
T  17539185 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgtataattctgaaattgattttatcatgttgtag 17539086  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  17539085 gttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 17538996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 69 - 256
Target Start/End: Complemental strand, 11259514 - 11259327
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||| |||||||||||    
T  11259514 gagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaatttagcatgtt 11259415  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    |||| ||||||||||| ||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||  |||||||||||||||    
T  11259414 gtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttgaatttgtgtag 11259327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 44274470 - 44274308
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44274470 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 44274371  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
     || ||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattga 44274308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 35354685 - 35354492
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  35354685 gagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgtt 35354586  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    || |||||||||||||||||||||| |||||| | ||||||||||||||| |||||  |||||||||||||  ||||||||||||||| |||||    
T  35354585 gttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaatccgttgaatttgtgtagaattga 35354492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 40812885 - 40812723
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40812885 taaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40812786  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||    
T  40812785 ggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattga 40812723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 115 - 262
Target Start/End: Original strand, 50348041 - 50348188
Alignment:
Q  115 actaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgta 214  Q
    ||||||||||||||||| ||| || ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  215 attggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 50348188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 14508926 - 14508749
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||    
T  14508926 aatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaggttagcatgttgtag 14508827  T
Q  173 gttgtagttatgggaatttgggaattagatatt-gaagttgtaattggttgttaatagagtagaaaatatgttgaatt 249  Q
    ||||||||||||||||||| |||||||| | || ||||||||||||||||||  | |||||||| ||| || ||||||    
T  14508826 gttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 10563760 - 10563609
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||| ||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  10563760 taaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatta 10563661  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    | | |||||||||||||||||||||||||||||||||||   ||||||||||    
T  10563660 ggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg 10563609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 15931481 - 15931669
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||| ||| |  |||||||||||||| |||||||||||||| |||    
T  15931481 aatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagtg-tataattctgaaatagagtttagcatgttttag 15931579  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||| |||||| |||||||| | | ||||||||||||  || |||||||||||||||||  ||||||||||||||| |||||    
T  15931580 gttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaattcgttgaatttgtgtagaattga 15931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 10311575 - 10311428
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |     
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 10311428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 17541517 - 17541423
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagc 163  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  17541517 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  125 tctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaatt 217  Q
    ||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 11563792 - 11563654
Alignment:
Q  85 tccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttat 183  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||| ||| |  |||||||||| ||||  | |||| || |||||||||||||||| |    
T  11563792 tccgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagtttt 11563693  T
Q  184 gggaatttgggaattagatattgaagttgtaattggttg 222  Q
    ||||||||||||||||| | |  ||||||||||||||||    
T  11563692 gggaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 19568208 - 19568328
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| |   |||| || |||||||||||||||| |||||||||||||||||    
T  19568208 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatta 19568307  T
Q  200 gatattgaagttgtaattggt 220  Q
    |   | |||||||||||||||    
T  19568308 gggttagaagttgtaattggt 19568328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 33565139 - 33565018
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| |||||||||||||||||| ||| |  ||||||||||||| |||| |||| || ||||||||||| |||| ||||||||||| ||||    
T  33565139 taaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 33565040  T
Q  199 agatattgaagttgtaattggt 220  Q
    || | | |||||||||||||||    
T  33565039 aggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 42323971 - 42324094
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| || | ||||| ||| || ||||||||||||| |||| |||  ||||||||||||||||||| ||||||||||| ||||    
T  42323971 taaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatt 42324070  T
Q  199 agatattgaagttgtaattggttg 222  Q
    ||   | |||||||||||||||||    
T  42324071 agggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 9510916 - 9511062
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||  ||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| ||||||    
T  9510916 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9511015  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttga 246  Q
    | | | |||||||||||||||||||   | |||||||||| ||||||    
T  9511016 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 9518891 - 9519037
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||  ||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| ||||||    
T  9518891 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9518990  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttga 246  Q
    | | | |||||||||||||||||||   | |||||||||| ||||||    
T  9518991 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 13185947 - 13185846
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||  |||| || |||| || |||||||||||||||| ||| ||||||||||||    
T  13185947 taaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 13185848  T
Q  199 ag 200  Q
    ||    
T  13185847 ag 13185846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 16050979 - 16050879
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| |||||||||||| ||||| || |||||| ||||||||| || | ||||| ||||||    
T  16050979 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatta 16050880  T
Q  200 g 200  Q
    |    
T  16050879 g 16050879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 24177736 - 24177835
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||||||| ||  ||||  | || ||||||||||||| ||| |||||||||||||    
T  24177736 taaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 35960928 - 35961049
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||| ||||||||||||||| ||  |  ||||||||||||| |||| |||| || ||||||||||| |||| ||| ||||||| ||||    
T  35960928 taaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatt 35961027  T
Q  199 agatattgaagttgtaattggt 220  Q
    || | | |||||||||||||||    
T  35961028 aggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 15566823 - 15566744
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||| |||||||| ||| |||| ||| |||||||||||||||||||||||||||| ||| || |||||||||||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 222
Target Start/End: Original strand, 45530572 - 45530725
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgt 167  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||   ||||| | || ||||| |||||| ||||||| |||| || ||    
T  45530572 gagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattct-aagtatatgattctgaaaattgaatttaacaggt 45530669  T
Q  168 tgtaggttgtagttatgggaatttg-ggaattagatattgaagttgtaattggttg 222  Q
    ||| |||||||||| |||||||||| | ||||||   | |||||||||||||||||    
T  45530670 tgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 11885560 - 11885657
Alignment:
Q  103 ggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 200  Q
    ||||||||||||||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||||||| |||||||||| |||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattag 11885657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 50347604 - 50347656
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaact 121  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  50347604 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 5200277 - 5200332
Alignment:
Q  207 aagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 5200332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 35064684 - 35064742
Alignment:
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||    
T  35064684 ttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattga 35064742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 36528919 - 36528851
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    |||||||||||||||| ||||||||||||||| ||| | |||||||||||| |||| ||||| ||||||    
T  36528919 taaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 37039085 - 37039005
Alignment:
Q  117 taactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaa 196  Q
    |||| |||| ||||||||| || ||||||||||||| |||  |||| ||||||||||||||||||| ||||||||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaa 37039005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 49968858 - 49968981
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 197  Q
    |||||||||| ||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || ||||||| |||||||| || ||||||||||||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaat 49968956  T
Q  198 tagatattgaagttgtaattggttg 222  Q
    ||| | |  ||||||||||||||||    
T  49968957 taggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 53646032 - 53646096
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaat 137  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||| |||| |||| ||||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaatcataaat 53646096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 50350793 - 50350867
Alignment:
Q  77 ttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| |||| |||| ||  | |||||||||||||||    
T  50350793 ttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaatcat-gagtatataattctgaaa 50350867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 6159484 - 6159427
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||  |||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaat 6159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 12509350 - 12509431
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||| ||| |||| ||||| ||| || ||||||||||||||||  |||| ||||| ||||| |||||||    
T  12509350 taaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 14641517 - 14641578
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||| |||||| |||| |||||||| |||||||||||||||| || |||||||||||    
T  14641517 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaat 14641578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 15446868 - 15446920
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| || ||| |||||||||    
T  15446868 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 22652826 - 22652773
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||| |||||||||||||||||||||| ||| | || |||||||||||    
T  22652826 ttaaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 17208576 - 17208524
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||| ||||||||||| || | || |||||||||||||    
T  17208576 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 131
Target Start/End: Original strand, 5200243 - 5200274
Alignment:
Q  100 taaggtaagggtgggactaactttctctaatt 131  Q
    ||||||||||||||||||||||||||||||||    
T  5200243 taaggtaagggtgggactaactttctctaatt 5200274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 2247650 - 2247694
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||||    
T  2247650 taaggtaagggtgagactaactctcaataattataaattatataa 2247694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 3263963 - 3264031
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    |||||||||||| ||| |||| |||||||||| ||| | |||||||| ||| |||| ||||| ||||||    
T  3263963 taaggtaagggtcggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 3264031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 3527124 - 3527187
Alignment:
Q  69 gagcaatcttgtagagtccgac--catctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||||||   || || || ||||||||||||||||||| |||||||||||    
T  3527124 gagcaaacttgtagagtccgaattcaacttatctaaggtaagggtgggactagctttctctaat 3527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 12917273 - 12917336
Alignment:
Q  69 gagcaatcttgtagagtccgac--catctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||||||   || | ||| |||| ||||||||||||||||||||||||||    
T  12917273 gagcaagcttgtagagtccgaattcaaccaatctaagataagggtgggactaactttctctaat 12917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 14152399 - 14152451
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||| ||||||||||| || | || ||| |||||||||    
T  14152399 taaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaa 14152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 16979964 - 16979912
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||| ||||| ||| |  | |||||||||||    
T  16979964 taaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 48631383 - 48631332
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||| |||| |||| ||||| |||||| ||||||||    
T  48631383 taaggtaagggtgggactaaccttctttaatcataaa-tatatagttctgaaa 48631332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 12465229 - 12465422
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  12465229 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12465328  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  12465329 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 12465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 69 - 256
Target Start/End: Original strand, 13147441 - 13147628
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  13147441 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagtttagcatgtt 13147540  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  13147541 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtag 13147628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 8851127 - 8851321
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  8851127 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 8851226  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  8851227 tgtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaatctgttgaatttgtgtagaattga 8851321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 12372357 - 12372164
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  12372357 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12372258  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | |||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  12372257 gcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 12372164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 69 - 256
Target Start/End: Original strand, 32433558 - 32433745
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  32433558 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 32433657  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    |||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  32433658 gtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaattagttgaatttgtgtag 32433745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 12322899 - 12323092
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  12322899 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12322998  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||| ||||||||  ||||||||||||||| |||||    
T  12322999 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaatccgttgaatttgtgtagaattga 12323092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 69 - 253
Target Start/End: Complemental strand, 11067551 - 11067367
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    |||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  11067551 gagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 11067452  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtg 253  Q
    |||||||||||||||||||||||||||||||| | |||| || ||||||||||||||||||||||||||||  ||||||||||||    
T  11067451 gtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaattcgttgaatttgtg 11067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 69 - 256
Target Start/End: Original strand, 12127132 - 12127319
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||    
T  12127132 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 12127231  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  12127232 gtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtag 12127319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 16999515 - 16999323
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat--tataaattatataattctgaaattgagtttagcatgttgt 170  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||  ||||| || ||||||||||||||||||||||||||||| |    
T  16999515 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagttgtataattctgaaattgagtttagcatgttat 16999416  T
Q  171 aggttgtagttatgggaa-tttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | |||||||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||    
T  16999415 atgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 16999323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 99 - 262
Target Start/End: Complemental strand, 20620339 - 20620176
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20620339 ttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatt 20620240  T
Q  199 agatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    || | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  20620239 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 20620176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 95 - 255
Target Start/End: Complemental strand, 20214204 - 20214044
Alignment:
Q  95 taatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 194  Q
    |||| ||||||||||||||||||||||||||| |||| | | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  195 aattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    |||||  | ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 20214044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 14180398 - 14180560
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||| ||||||||||| ||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14180398 taaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 14180497  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
      | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  14180498 tgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 14180560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 20586404 - 20586242
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||    
T  20586404 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaacta 20586305  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |   ||||||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  20586304 gggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 20586242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 46386088 - 46386250
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||| ||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  46386088 taagataagggtaggactaactttctctaattctaagttgtataattctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaatta 46386187  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | |||||||||||||||||||||||||||||||||| |  ||||||||||||||| |||||    
T  46386188 ggttttgaagttgtaattggttgttaatagagtagaaattccgttgaatttgtgtagaattga 46386250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 10277375 - 10277228
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 10277228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 100 - 255
Target Start/End: Original strand, 24269947 - 24270102
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||||||||| | ||||   | || ||| ||||||||||    
T  24269947 taaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatta 24270046  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    | | ||||||| ||||||||||||||||||||||||||||   |||||||||||||    
T  24270047 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 24270102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 43276713 - 43276796
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||   || |||||||||||||    
T  43276713 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 48807325 - 48807448
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| |  |||||||||| |||| || |||| || ||||||| |||||||| ||||||||||||||||    
T  48807325 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatt 48807424  T
Q  199 agatattgaagttgtaattggttg 222  Q
     | ||  |||||||||||||||||    
T  48807425 tggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 35771441 - 35771542
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| || |||| || |||||||||||||||| ||| ||||||||||||    
T  35771441 taaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 35771540  T
Q  199 ag 200  Q
    ||    
T  35771541 ag 35771542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 44374926 - 44374833
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttag 162  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||| || ||||||||||||||| ||| || |||||||||||||||||||||||    
T  44374926 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 44383791 - 44383698
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttag 162  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||| || ||||||||||||||| ||| || |||||||||||||||||||||||    
T  44383791 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 47974820 - 47974944
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| |||||||||||||    
T  47974820 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 47974919  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
      | | |||||||||||||||||||    
T  47974920 tgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 12754612 - 12754711
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||  |||| || || |||||||||||| |||| |||||||||||||    
T  12754612 taaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaatta 12754711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 19195691 - 19195611
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| || | || |||||||||||||    
T  19195691 caatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 15095637 - 15095759
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  199 agatattgaagttgtaattggttg 222  Q
    || | | |||||||||||| ||||    
T  15095736 aggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 18074619 - 18074678
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaatt 131  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  18074619 caatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaatt 18074678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 25943171 - 25943041
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||| |||| ||||||| ||||||||||||||| |   || ||||||||||||||||| ||||||||||||| | ||||   | || |||||||| ||||    
T  25943171 ttaatgtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaatt 25943072  T
Q  199 agatattgaagttgtaattggttgttaatag 229  Q
    || | ||||||| ||||||||||||||||||    
T  25943071 aggttttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 4071872 - 4071771
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| | |||||| |||| ||||||  |||| || |||||||||||||||| |||| ||||| |||||    
T  4071872 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatt 4071773  T
Q  199 ag 200  Q
    ||    
T  4071772 ag 4071771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 14218895 - 14218996
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| |||||||||||||||||| ||| |  |||||||||| ||||||| |||| || |||||||||||||||| || |||||| ||||||    
T  14218895 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatt 14218994  T
Q  199 ag 200  Q
    ||    
T  14218995 ag 14218996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| |  ||||||| || |||| || |||| || ||||||| |||||||| ||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  199 ag 200  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 19283135 - 19283079
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaa 129  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  19283135 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 256
Target Start/End: Complemental strand, 33002211 - 33002057
Alignment:
Q  94 ctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 193  Q
    |||| ||||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||||  |||| |       ||||||||||| |||||||||||    
T  33002211 ctaacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttgg 33002120  T
Q  194 gaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    |||||||   | |||||||||||||||||||   | |||||| ||| ||||||||| ||||||    
T  33002119 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtag 33002057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 8135238 - 8135359
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| ||||||| ||| |||||  ||| |  ||| ||||||||||||| |||| || |||||||||||||||| | |||||||| ||||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagtg-tatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  200 gatattgaagttgtaattggttg 222  Q
    | | | |||||||||||||||||    
T  8135337 ggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 14160825 - 14160891
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||| ||||    
T  14160825 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaatcataa 14160891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 13744655 - 13744728
Alignment:
Q  97 atttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 170  Q
    |||||| |||||||||||| ||||||||||||||| ||  || ||||||||||||||| |||||||||||||||    
T  13744655 atttaacgtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  142 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttg 222  Q
    ||||||||||||||| |||| || ||||||||| |||||| |||||||||||||||||| | | ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 13698638 - 13698761
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||| ||||||||||||| ||||| ||| ||   ||||||||||| |||  |||  |||||| |||||||||||| ||| ||||||||||||    
T  13698638 taaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatt 13698737  T
Q  199 agatattgaagttgtaattggttg 222  Q
    ||   | |||||||||||||||||    
T  13698738 agggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 15140265 - 15140143
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||| ||||| ||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  15140265 taaggtatgggtgagactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15140167  T
Q  199 agatattgaagttgtaattggttg 222  Q
    || | |  ||||||||||||||||    
T  15140166 aggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 58385 - 58443
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||| |||||||||||    
T  58385 caatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 4690654 - 4690715
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||  |||||||| ||||||||||||||||||||||| ||| || |||||||||||||    
T  4690654 catctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 10658851 - 10658932
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || ||| ||||||||||||  |||| ||| ||||||| |||||||    
T  10658851 taaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 15289157 - 15289056
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||| |||||||||||||| ||| |  ||||| |||| ||||||  |||| || |||||||||||||||| || | ||||| |||||    
T  15289157 taaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatt 15289058  T
Q  199 ag 200  Q
    ||    
T  15289057 ag 15289056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 15624070 - 15623950
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| ||||||| |||  ||||| ||| |  ||| ||||||||||||| ||||  | ||||||| |||||||| |||||||||| ||||||    
T  15624070 taaggtaagggtgagactaaccttcaataattctaagtg-tatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaatta 15623972  T
Q  200 gatattgaagttgtaattggtt 221  Q
    | | | | ||||||||||||||    
T  15623971 ggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 12557923 - 12557853
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggt 220  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| |||||| | | ||||||| |||||||    
T  12557923 aaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattaggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 36704566 - 36704652
Alignment:
Q  95 taatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    |||| ||||||||||||||||||||| |||| ||||| ||| || | |||||||||||||   |||| ||||||||| | |||||||    
T  36704566 taatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagtt 36704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 38299833 - 38299748
Alignment:
Q  69 gagcaatcttgtagagtccgac--catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||| ||||||||||| ||   |||||||| ||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  38299833 gagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 13744477 - 13744540
Alignment:
Q  69 gagcaatcttgtagagtccg--accatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||| |  | |||||||| ||||||||||||||||||| |||||||||||    
T  13744477 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 16250222 - 16250274
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||||||||||||| || | || ||||||| |||||    
T  16250222 taaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 29052182 - 29052234
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  29052182 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  140 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggt 220  Q
    ||||||||||||||||  ||||  | ||| |||||||||||| | |||||||||||||||| | | |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 25943328 - 25943289
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  25943328 catctaatataaggtaagggtgggactagctttctctaat 25943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 32160169 - 32160252
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||| ||| |   |||  ||||||||||||  |||||||||||||||||| ||| | || |||||||||||    
T  32160169 gagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaa 32160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Original strand, 8488094 - 8488124
Alignment:
Q  100 taaggtaagggtgggactaactttctctaat 130  Q
    |||||||||||||||||||||||||||||||    
T  8488094 taaggtaagggtgggactaactttctctaat 8488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Original strand, 8513753 - 8513783
Alignment:
Q  100 taaggtaagggtgggactaactttctctaat 130  Q
    |||||||||||||||||||||||||||||||    
T  8513753 taaggtaagggtgggactaactttctctaat 8513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 36685187 - 36685245
Alignment:
Q  142 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 200  Q
    ||||||||||| ||  |||| || |||||||||||||||| ||| ||||||||||||||    
T  36685187 taattctgaaactggatttaacaggttgtaggttgtagttttggaaatttgggaattag 36685245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 14156361 - 14156410
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggacta 118  Q
    |||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  14156361 gagcaatcttgtagataccgataatctaatctaaggtaagggtgggacta 14156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 21661317 - 21661257
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||| | ||||||||||||||||||||| |||| ||| ||| | ||||||||||||||||    
T  21661317 catctagtctaaggtaagggtgggactaaccttctttaa-tatgagttatataattctgaaa 21661257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 30820151 - 30820243
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 193  Q
    |||||| |||||||||||||| |||  ||||| | | | || ||||||||||| ||  |||| || |||||||||||||||| |||||||||||    
T  30820151 taaggtgagggtgggactaaccttcagtaattctgagt-atgtaattctgaaactggatttaacaggttgtaggttgtagttttgggaatttgg 30820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 43745717 - 43745656
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||  ||||||||||||||||||| ||||||||||| || | || ||||||| |||||    
T  43745717 catctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 831634 - 831678
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||||    
T  831634 taaggtaagggtgagactaactctcaataattataaattatataa 831678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 1196814 - 1196858
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||||    
T  1196814 taaggtaagggtgagactaactctcaataattataaattatataa 1196858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 3287796 - 3287744
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| ||||| ||||||||||| |||  || |||||||||||||    
T  3287796 taaggtaagggtgagactagctttctctaataataggttgtataattctgaaa 3287744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 15203230 - 15203132
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcat-gttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| |||  |||||||  | ||| | ||||||||| ||| |||| ||| |||||||||||||||| |  |||||||||||||    
T  15203230 taaggtaagggtgggactaaccttcaataattat-gagtatgtgattctgaaaatgaatttaacatggttgtaggttgtagtt-ttagaatttgggaatt 15203133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 16550005 - 16550057
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||| ||||||||||||||||||||| ||| |  | |||||||||||    
T  16550005 taaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 16615657 - 16615605
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||| ||||||||||||||||||||| ||| |  | |||||||||||    
T  16615657 taaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16615605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 18955382 - 18955330
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||| |||| |||||||||||||||||| ||| |  |||||||||||||    
T  18955382 taaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 20252182 - 20252234
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||| |||||| ||||||||||| || | || |||||||||||||    
T  20252182 taaggtaagggtaggactagctttctctaataatgagttgtataattctgaaa 20252234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 34958613 - 34958569
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||||    
T  34958613 taaggtaagggtgagactaactctcaataattataaattatataa 34958569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 4e-84; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 7828055 - 7827862
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  7828055 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 7827956  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  7827955 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatcggttgaatttgtgtagaattga 7827862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 23150256 - 23150449
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  23150256 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 23150355  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  23150356 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaatttgttgaatttgtgtagaattga 23150449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 19655199 - 19655393
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||| |||||    
T  19655199 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgt 19655298  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||    
T  19655299 tgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 19655393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 18703648 - 18703464
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgta 171  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||    
T  18703648 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18703549  T
Q  172 ggttgtagttatgggaatttgggaattagatattgaagttgt----aattggttgttaatagagtagaaaatatgttgaatttgt 252  Q
    ||||||||||||||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||  |||||||||||    
T  18703548 ggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgt 18703464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 18709583 - 18709399
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgta 171  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||    
T  18709583 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18709484  T
Q  172 ggttgtagttatgggaatttgggaattagatattgaagttgt----aattggttgttaatagagtagaaaatatgttgaatttgt 252  Q
    ||||||||||||||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||  |||||||||||    
T  18709483 ggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgt 18709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 68 - 252
Target Start/End: Original strand, 27125445 - 27125629
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || ||||| ||| |||||||| |||||||||    
T  27125445 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaaaattgagattagcatgt 27125544  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgt 252  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||||||  |||||||||||    
T  27125545 tgtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgt 27125629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 15890712 - 15890874
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||    
T  15890712 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatta 15890811  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  15890812 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 15890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 27329981 - 27330131
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||| ||| |||||||||||||||||| ||  || |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  27329981 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27330080  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaattt 250  Q
    | | ||||||||||||||||||||||||||||||||||||  |||||||||    
T  27330081 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 27390721 - 27390871
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||| ||| |||||||||||||||||| ||  || |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  27390721 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27390820  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaattt 250  Q
    | | ||||||||||||||||||||||||||||||||||||  |||||||||    
T  27390821 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 24267900 - 24267800
Alignment:
Q  101 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 200  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattag 24267801  T
Q  201 a 201  Q
    |    
T  24267800 a 24267800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  103 ggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 202  Q
    ||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| |||||||| |    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  203 attgaagttgtaattggttgtt 224  Q
     | |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 256
Target Start/End: Complemental strand, 28948627 - 28948470
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtag-ttatgggaatttgggaatt 198  Q
    ||||||||||||| |||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||| ||||||| || | | ||||||||||||    
T  28948627 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatt 28948528  T
Q  199 agatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    || | | |||||||||||||||||||   | |||||||||||||||||||| ||||||    
T  28948527 aggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtag 28948470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 18928733 - 18928614
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||| ||||||||||||||||||| ||| |  ||||||||||||| |||| |||| || ||||||||||| |||| ||||||||||| ||||    
T  18928733 taaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 18928634  T
Q  199 agatattgaagttgtaattg 218  Q
    || | | |||||||||||||    
T  18928633 aggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 19235175 - 19235037
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||| ||||||||||| ||||||||||||||| ||  || ||||||||||||||||| ||||| ||||||| | ||||   | || ||||||||| ||||    
T  19235175 taagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggg-atta 19235077  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaat 239  Q
    | | ||||||| ||||||||||||||||| ||||||||||    
T  19235076 ggttttgaagtcgtaattggttgttaataaagtagaaaat 19235037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 255
Target Start/End: Original strand, 30673402 - 30673550
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||| ||||||||||||||| ||  || ||||||| ||||||||||||||||||| ||| | ||||        |||||| |||||||    
T  30673402 taaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaatta 30673493  T
Q  200 gatattgaagttgtaa-ttggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    | | ||||| | |||| ||||||||||||||||||||||||   |||||||||||||    
T  30673494 ggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgta 30673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 17318135 - 17318184
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggacta 118  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17318135 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 218
Target Start/End: Complemental strand, 19401147 - 19401028
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 197  Q
    |||||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||| ||||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaat 19401049  T
Q  198 tagatattgaagttgtaattg 218  Q
    ||| | |  ||||||||||||    
T  19401048 taggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 20410481 - 20410564
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| | || ||||||||||| ||   || |||||||||||||    
T  20410481 gagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaa 20410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 19167926 - 19167992
Alignment:
Q  189 tttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||||||   |||||||||||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 19167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 27572121 - 27572198
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcat-gttgtaggtt 175  Q
    |||||||||||||| |||||||||||||||||| ||| |  ||||||||||||||||| |||| ||| ||||||||||    
T  27572121 ttaaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 31731904 - 31732005
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||||||||| |||| ||| |  |||||||||| ||||||  |||  || |||||||||||||||| |||| ||||| |||||    
T  31731904 taaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatt 31732003  T
Q  199 ag 200  Q
    ||    
T  31732004 ag 31732005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 23431420 - 23431482
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||| |||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaatcataa 23431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 15998941 - 15998880
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagttta 161  Q
    ||||||||||||| |||||||||||||||||| ||| || |||||||||||||  |||||||    
T  15998941 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 19825455 - 19825516
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||| ||||| |||||||||||    
T  19825455 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 24550168 - 24550249
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||  |||| ||||| ||| || | ||||||||||||||  |||| ||||||||||| |||||||    
T  24550168 taaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 24550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 25922084 - 25922033
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaac 120  Q
    ||||||||| |||||| |||| |||||||| |||||||||||||||||||||    
T  25922084 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaac 25922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 13285833 - 13285748
Alignment:
Q  69 gagcaatcttgtagagtccga--ccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||| ||||||||||| ||  ||||||||| ||||||||||||||||||||| |||| |||| || | ||  ||||||||||||    
T  13285833 gagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaa 13285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 19167853 - 19167923
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 170  Q
    |||||||||||||| | ||||||| ||||||  ||  || ||||||||||| |||||||||||||||||||    
T  19167853 taaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 12041620 - 12041672
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||| |||| ||||| ||| || |||||||||||||    
T  12041620 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 23501724 - 23501601
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaat-tgagtttagcatgttgtaggttgtagttatgggaa-tttgggaat 197  Q
    ||||||||||||| ||||||| |||  ||||| |||||  | |||||||||||  ||| |||| || |||||||||||||||| | |||| |||||||||    
T  23501724 taaggtaagggtgagactaaccttcaataattctaaatgtt-taattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaat 23501626  T
Q  198 tagatattgaagttgtaattggttg 222  Q
    ||| | | |||||||||||| ||||    
T  23501625 taggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 10446278 - 10446239
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  10446278 catctaatctaaggtaagggtgggactagctttctctaat 10446239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 23658146 - 23658089
Alignment:
Q  95 taatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||| ||||||||||||||||||| ||||| ||||| |||  || |||||||||||||    
T  23658146 taatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaa 23658089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 15173453 - 15173505
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||| ||||||||||||||||||||||| ||| |  | |||||||||||    
T  15173453 taaggtaatggtgggactaactttctctaattctaagtattttaattctgaaa 15173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 72 - 262
Target Start/End: Original strand, 440 - 630
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgta 171  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  440 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 539  T
Q  172 ggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  540 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaataagttgaatttgtgtagaattga 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 9e-82; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 25091736 - 25091543
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  25091736 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 25091637  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  25091636 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 25091543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 72 - 262
Target Start/End: Original strand, 53630446 - 53630636
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgta 171  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  53630446 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 53630545  T
Q  172 ggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  53630546 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 53630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 79 - 262
Target Start/End: Complemental strand, 16998598 - 16998415
Alignment:
Q  79 gtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgta 178  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  16998598 gtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgta 16998499  T
Q  179 gttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  16998498 gttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagtattga 16998415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 10356405 - 10356598
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||| | | ||||||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  10356405 gagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 10356504  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||  ||||||||||||||| |||||    
T  10356505 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaatccgttgaatttgtgtagaattga 10356598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 78 - 262
Target Start/End: Complemental strand, 11426017 - 11425833
Alignment:
Q  78 tgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgt 177  Q
    ||||||| |||| ||||  ||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  178 agttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 11425833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 15115274 - 15115112
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15115274 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 15115175  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
      | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 15115112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 19610403 - 19610214
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  19610403 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgtag 19610304  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||| ||||||  | |||| |||||||||||||||||||||||||||||||  ||| ||||||||||| |||||    
T  19610303 gttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaatccgttaaatttgtgtagaattga 19610214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 42875880 - 42875687
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||| |||||||||| ||  |||||||||||||||||||||||||||||||| | ||||| ||| || |||||||||||||||||||||||||||||    
T  42875880 gagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttgtataattctgaaattgagtttagcatgtt 42875781  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||    
T  42875780 gtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattga 42875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 37019722 - 37019561
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  37019722 taaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatta 37019623  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 261  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  37019622 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 6633541 - 6633688
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 6633688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 46001535 - 46001682
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    ||||||||| |||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 46001682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 9924206 - 9924085
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| |||||||||||||||||| ||| |  ||||||||||||| |||| |||| || ||||||||||| |||| ||||||||||| ||||    
T  9924206 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 9924107  T
Q  199 agatattgaagttgtaattggt 220  Q
    || | | |||||||||||||||    
T  9924106 aggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 10694213 - 10694297
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||| | || |||||||||||    
T  10694213 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 10907979 - 10908063
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||| | || |||||||||||    
T  10907979 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 12424259 - 12424342
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  12424259 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 14549812 - 14549695
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || |||  |||||||| ||  |||| || || ||||||||||||| ||| |||||||||||||    
T  14549812 taaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 14549713  T
Q  200 gatattgaagttgtaatt 217  Q
    | | | ||||||||||||    
T  14549712 ggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 19434559 - 19434658
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| | | |||||||||||||    
T  19434559 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 25513934 - 25513851
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||| || |||||||| |||||||| |||||||||| ||||||||||| || | || |||||||||||||    
T  25513934 gagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 15613142 - 15613061
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || ||||||||||||||||  |||| ||||||||||| |||||||    
T  15613142 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 19022427 - 19022366
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  19022427 gagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 9870444 - 9870568
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 197  Q
    |||| ||||||||||||||||||||  ||||| ||| || |||||||||| ||||||  |||  |||| |||||||||||||| |||||||||||| |||    
T  9870444 taagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaat 9870543  T
Q  198 tagatattgaagttgtaattggttg 222  Q
    |||   | |||||||||||||||||    
T  9870544 tagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 9639089 - 9639010
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||| || | || | |||||||||||    
T  9639089 aatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 11478653 - 11478772
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| ||||||||| |||||||| ||| |  |||||||||| ||||||| |||| || ||||||| ||| |||| ||||||||||| ||||    
T  11478653 taaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatt 11478752  T
Q  199 agatattgaagttgtaattg 218  Q
    || | | ||| |||||||||    
T  11478753 aggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 33186986 - 33186903
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||| ||   || |||||||||||||    
T  33186986 gagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 40230389 - 40230323
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    ||||||||||||||||| | | |||||||| |||||||||||||||||||||||||| |||| ||||    
T  40230389 gagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaatcataa 40230323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 21248 - 21147
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||| || ||||||| |||| ||||| ||| || ||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| |||||    
T  21248 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 21149  T
Q  199 ag 200  Q
    ||    
T  21148 ag 21147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 51993613 - 51993532
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || | ||||||||||||||  |||| ||||||||||| |||||||    
T  51993613 taaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 26921708 - 26921760
Alignment:
Q  187 aatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaat 239  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaat 26921760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 33243267 - 33243329
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    ||||||||||||||| | |||||||| ||||||||||||| ||||||| |||| |||| ||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaatcataa 33243329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 2424378 - 2424439
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||  ||||||||||||| |||||||||||||||||| ||| || ||||||| |||||    
T  2424378 catctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 35811375 - 35811428
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||||||||||||||| ||| |  ||||||| |||||    
T  35811375 ttaaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 15009015 - 15008963
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  15009015 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 16296990 - 16296938
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||| ||||||||||| || | || |||||||||||||    
T  16296990 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 21062693 - 21062593
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| |  ||||| | || ||||||  |||| || || ||||||||||||| || | ||||| |||||    
T  21062693 taaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaatt 21062594  T
Q  199 a 199  Q
    |    
T  21062593 a 21062593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 10273442 - 10273405
Alignment:
Q  93 tctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  10273442 tctaatctaaggtaagggtgggactagctttctctaat 10273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 17143291 - 17143246
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||    
T  17143291 ttaaggtaagggtgagactaactctcaataattataaattatataa 17143246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 14187010 - 14186955
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattga 156  Q
    |||||||||||||||| ||||||||||||||| | || | ||| |||||||||||||    
T  14187010 taaggtaagggtgggagtaactttctctaattct-aagtgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 15239816 - 15239868
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| ||||| ||||||||||| || |||| ||||| |||||||    
T  15239816 taaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaa 15239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 15747557 - 15747601
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||||    
T  15747557 taaggtaagggtgagactaactctcaataattataaattatataa 15747601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 40620584 - 40620532
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||| ||||||||||||||| ||| |  | |||||||||||    
T  40620584 taaggtaagggtgggaataactttctctaattctaagtattttaattctgaaa 40620532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 9e-82; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 19676794 - 19676601
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  19676794 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 19676695  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  19676694 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 19676601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 71 - 262
Target Start/End: Original strand, 21046020 - 21046211
Alignment:
Q  71 gcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  21046020 gcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 21046119  T
Q  171 aggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  21046120 aggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 21046211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 73 - 256
Target Start/End: Original strand, 16058287 - 16058469
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16058387 gttgtagttatggaaatttgggaattaggt-ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtag 16058469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 20633599 - 20633796
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||    
T  20633599 tgagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttgtataattctgaaattgagtttagcatgt 20633698  T
Q  168 tgtaggttgtag---ttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||| |||   ||||||||||||||||||||| | ||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||    
T  20633699 tgtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaaaataagttgaatttgtgtagaattga 20633796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 42913101 - 42912939
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  42913101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatta 42913002  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  42913001 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 42912939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 13302954 - 13302853
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| |||||||||||||||||| ||| |  ||||||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  13302954 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 13302855  T
Q  199 ag 200  Q
    ||    
T  13302854 ag 13302853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 24723351 - 24723475
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||| |||| || || |||| |||||||| ||| |||||| ||||||    
T  24723351 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatta 24723450  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
      | | |||||||||||||||||||    
T  24723451 tgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 256
Target Start/End: Complemental strand, 51324556 - 51324400
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| ||||||||||| |||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| |||||| ||||||||||    
T  51324556 taaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatta 51324457  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    | | |  ||||||||||||||||||   | |||||||||| | ||||||| ||||||    
T  51324456 ggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtag 51324400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 7051922 - 7052046
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||| || ||||| | | |||||||||||||    
T  7051922 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatta 7052021  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
    | | | ||| |||||||||||||||    
T  7052022 ggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 21168985 - 21168831
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||| | ||||||||||||||| ||  || ||||||||| ||||||||||||||||||||| | ||||   | || |||||||||||| |    
T  21168985 taaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataa 21168886  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    | | ||||| | ||  || ||| |||||||||||||||||   |||||||||||||    
T  21168885 ggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgta 21168831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 22350795 - 22350668
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgt 167  Q
    ||||||||||||||||||||| ||    || ||||||||||||||||||||| |||  ||||| | | | |||| ||||||||| |||| |||| || ||    
T  22350795 gagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagt-atatgattctgaaaattgaatttaacaagt 22350701  T
Q  168 tgtaggttgtagttatgggaatttgggaattag 200  Q
    |||||||||||||| ||||||||||||||||||    
T  22350700 tgtaggttgtagttttgggaatttgggaattag 22350668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 20588721 - 20588660
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||    
T  20588721 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 20593259 - 20593198
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||    
T  20593259 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 28476703 - 28476786
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||| ||||||||  |||||||| |||||||||||||||||||  |||||||||| || | || |||||||||||||    
T  28476703 gagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 41225423 - 41225489
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||| |||| ||||    
T  41225423 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaatcataa 41225489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 41226676 - 41226742
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||| |||| ||||    
T  41226676 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaatcataa 41226742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 42697836 - 42697735
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| ||||||| |||| ||||| ||| || ||||||||||| |||||  |||| ||||||||||||||||||| || | ||||| |||||    
T  42697836 taaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatt 42697737  T
Q  199 ag 200  Q
    ||    
T  42697736 ag 42697735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 45755572 - 45755471
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| ||||||| |||| ||||||||| |||||| |||||| ||| ||  |||| || |||||||||||||||| || ||||||| |||||    
T  45755572 taaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaatt 45755473  T
Q  199 ag 200  Q
    ||    
T  45755472 ag 45755471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 4595853 - 4595944
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatt 190  Q
    ||||||||||||| |||||||||||||||||| |||    |||||||||| |||| || |||| || |||||||||||||||| ||||||||    
T  4595853 taaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 7320594 - 7320716
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| | | |||||| ||| |  ||| ||||||||| |||| |||| || ||||||| |||||||| ||||||||||||||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagtg-tattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatt 7320692  T
Q  199 agatattgaagttgtaattggttg 222  Q
    |  | | || ||||||||||||||    
T  7320693 atgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 44822020 - 44822145
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 197  Q
    |||||||||| ||||||||||| |||  ||||| | | |||||| ||| ||||| |||  |||| || || ||||||||||||| ||| |||||||||||    
T  44822020 ttaaggtaagagtgggactaaccttcaataattctga-ttatatgattatgaaaattggatttaacaggtggtaggttgtagttctggaaatttgggaat 44822118  T
Q  198 tagatattgaagttgtaattggttgtt 224  Q
    ||| | | |||||||||||||||||||    
T  44822119 taggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 8306689 - 8306628
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||| |||||| |||| |||||||| ||||||||| ||||||||| |||||||||||    
T  8306689 gagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaat 8306628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 12710950 - 12710889
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||| | |||||||| |||||||| | |||||||| |||||||||||    
T  12710950 gagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaat 12710889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 21239049 - 21239130
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||| |||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||||||||||||    
T  21239049 taaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 46197745 - 46197797
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  46197745 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 51336531 - 51336479
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| || ||| |||||||||    
T  51336531 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 45499446 - 45499374
Alignment:
Q  97 atttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 170  Q
    |||||| |||||||||| | ||||| ||||||||| ||  || |||||||||||||||||||||||||| ||||    
T  45499446 atttaacgtaagggtgg-attaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 12327743 - 12327795
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| |||||||||||||||||| ||| || ||| |||||||||    
T  12327743 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 29763632 - 29763684
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  29763632 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 22145665 - 22145696
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||||||||||||||||    
T  22145665 ttaaggtaagggtgggactaactttctctaat 22145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 11946453 - 11946392
Alignment:
Q  140 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattag 200  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| ||||||||||||    
T  11946453 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattag 11946392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 16401967 - 16401897
Alignment:
Q  96 aatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||||||| ||||||||| ||   || |||||||||||||| | ||||| ||||||    
T  16401967 aatttaaggtaagggtgggactaac-ttctctaataatgggtt-tataattctgaaatagggtttaacatgtt 16401897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 50001528 - 50001476
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||| ||||| ||| |  | |||||||||||    
T  50001528 taaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 50001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 42817876 - 42818069
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  42817876 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 42817975  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||    
T  42817976 gtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaattga 42818069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 69 - 256
Target Start/End: Complemental strand, 19140847 - 19140661
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||| |||    
T  19140847 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaattgagtttagcaagtt 19140749  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  19140748 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtag 19140661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 20083638 - 20083800
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 20083800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 75 - 255
Target Start/End: Original strand, 39935982 - 39936165
Alignment:
Q  75 tcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagca---tgttgta 171  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| || ||||||| |||||||||||||||||   |||||||    
T  39935982 tcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgttgta 39936081  T
Q  172 ggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  39936082 ggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgta 39936165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 6101753 - 6101915
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||| ||||||||||||||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  6101753 taaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatca 6101852  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  6101853 ggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattga 6101915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 110 - 262
Target Start/End: Original strand, 5082222 - 5082374
Alignment:
Q  110 gtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaag 209  Q
    |||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 5082321  T
Q  210 ttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  5082322 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 5082374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 91 - 262
Target Start/End: Complemental strand, 5761594 - 5761424
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatt 190  Q
    |||||||  |||||||||||||||||||||||||||||||| ||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5761594 catctaacctaaggtaagggtgggactaactttctctaattctaagtg-tataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatt 5761496  T
Q  191 tgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||| | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||    
T  5761495 tgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 5761424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 104 - 262
Target Start/End: Original strand, 6573060 - 6573218
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    ||||||||| |||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |     
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 6573218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 37292753 - 37292606
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 37292606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 6202824 - 6202677
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    ||||||||| |||||||||||||||||| ||  || ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |     
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 6202677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 20178581 - 20178692
Alignment:
Q  153 ttgagtttagca-tgttgtaggttgtagttatgggaatttgggaattagatattgaagttgt-aattggttgttaatagagtagaaaatatgttgaattt 250  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||||||||||||||||  |||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaattt 20178680  T
Q  251 gtgtagtattga 262  Q
    |||||| |||||    
T  20178681 gtgtagaattga 20178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 20397510 - 20397656
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||    |||||     || || |||||||||||    
T  20397510 taaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaatta 20397600  T
Q  200 gatattgaagttgtaatt-ggttgttaatagagtagaaaatatgttgaatttgtgt 254  Q
    | | || ||||||||||| ||||||||||||||||||||||   ||||||||||||    
T  20397601 ggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 256
Target Start/End: Original strand, 22532132 - 22532288
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| || ||||||||||    
T  22532132 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22532231  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    | | |  |||||||||||| |||||   | |||||||||| ||||||||| ||||||    
T  22532232 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtag 22532288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 256
Target Start/End: Original strand, 22536817 - 22536973
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| || ||||||||||    
T  22536817 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22536916  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    | | |  |||||||||||| |||||   | |||||||||| ||||||||| ||||||    
T  22536917 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtag 22536973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 18761531 - 18761448
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| |  |||||||||||||    
T  18761531 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 20022025 - 20022131
Alignment:
Q  85 tccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttat 183  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| ||| |  |||||||||| |||| || |||| || |||||||||||||||| |    
T  20022025 tccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttt 20022124  T
Q  184 gggaatt 190  Q
    |||||||    
T  20022125 gggaatt 20022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 31722493 - 31722616
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||| ||||||||||||||||||||||||||| ||| |  ||||||| ||||| | || |||| || |||||||||||||||| ||||||||||| ||||    
T  31722493 taagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatt 31722592  T
Q  199 agatattgaagttgtaattggttg 222  Q
     | | | |||||||||||||||||    
T  31722593 tggtttagaagttgtaattggttg 31722616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 17906849 - 17906949
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || |||||||||||||||  |||| ||||| ||||||    
T  17906849 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatta 17906948  T
Q  200 g 200  Q
    |    
T  17906949 g 17906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 39694281 - 39694377
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 200  Q
    ||||||| | ||||| |||||||||||||||| || ||| ||||||||| ||  |||| || |||||||||||||||| ||||||||||||||||||    
T  39694281 gtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattag 39694377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 45469219 - 45469342
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| |||||||||||||||||| ||| |  |||||||||| |||| || |||| || |||||||||| ||||| ||  ||||||||||||    
T  45469219 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatt 45469318  T
Q  199 agatattgaagttgtaattggttg 222  Q
    |  | | |||||||||||||||||    
T  45469319 atgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 21579175 - 21579241
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| |||| ||||    
T  21579175 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaatcataa 21579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 22258275 - 22258353
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattc 147  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||| || | || ||||||||    
T  22258275 gagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtataattc 22258353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 36306080 - 36306019
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||    
T  36306080 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 18834503 - 18834444
Alignment:
Q  71 gcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||| |||||||||||    
T  18834503 gcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 22208352 - 22208269
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  22208352 gagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 22317911 - 22318033
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || ||| ||||||||||||  |||||||||||| ||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattt 22318009  T
Q  199 agatattgaagttgtaattggttg 222  Q
    || | | |||||||||||||||||    
T  22318010 aggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 23943795 - 23943857
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaatt 131  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||  || ||||||||||||    
T  23943795 gagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaatt 23943857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 29762837 - 29762903
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||| |||| ||||    
T  29762837 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaaactaaccttctttaatcataa 29762903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 4380608 - 4380669
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||  |||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  4380608 catctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 23899987 - 23900080
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttg 192  Q
    ||||||||||||| |||||||||||||||||| ||| | |||||| ||||| |||||| |||| || |||||||| ||||||| |||| |||||    
T  23899987 taaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttg 23900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 36727038 - 36727139
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| |||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||||||| | || ||||| |||||    
T  36727038 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatt 36727137  T
Q  199 ag 200  Q
    ||    
T  36727138 ag 36727139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 12037133 - 12037184
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaac 120  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  12037133 gagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaac 12037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 36305908 - 36305837
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 170  Q
    |||| ||||||||| || ||||||||| ||||| ||  || ||||||| |||||||||||||||||||||||    
T  36305908 ttaacgtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 42265546 - 42265609
Alignment:
Q  138 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 200  Q
    ||||| ||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||||    
T  42265546 tatatgattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattag 42265609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 17218755 - 17218653
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgag-tttagcatgttgtaggttgtagttatgggaatttgggaat 197  Q
    ||||| |||||||||||||||||||||||| || ||| |  ||||||||||||| | || |||||||  ||||||||||| ||| || | ||||| ||||    
T  17218755 ttaagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaat 17218656  T
Q  198 tag 200  Q
    |||    
T  17218655 tag 17218653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 19700213 - 19700131
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || ||||||||| | ||| |  |||| |||||||||||||||||||    
T  19700213 taaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagtt 19700131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 23419493 - 23419411
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || ||||||||||| |||||  |||| ||| ||||||| |||||||    
T  23419493 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 22254818 - 22254741
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttg 176  Q
    |||||||| ||||||||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||    
T  22254818 taaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 23948315 - 23948214
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||| |||||| |||| ||||| ||| || ||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| |||||    
T  23948315 taaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 23948216  T
Q  199 ag 200  Q
    ||    
T  23948215 ag 23948214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 22345249 - 22345186
Alignment:
Q  69 gagcaatcttgtagagtccg--accatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||| |  | |||||||| ||||||||||||||||||| |||||||||||    
T  22345249 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 22356909 - 22356846
Alignment:
Q  69 gagcaatcttgtagagtccg--accatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||| |  | |||||||| ||||||||||||||||||| |||||||||||    
T  22356909 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 26454760 - 26454708
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  26454760 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 131
Target Start/End: Original strand, 17158963 - 17158994
Alignment:
Q  100 taaggtaagggtgggactaactttctctaatt 131  Q
    ||||||||||||||||||||||||||||||||    
T  17158963 taaggtaagggtgggactaactttctctaatt 17158994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 19880874 - 19880843
Alignment:
Q  100 taaggtaagggtgggactaactttctctaatt 131  Q
    ||||||||||||||||||||||||||||||||    
T  19880874 taaggtaagggtgggactaactttctctaatt 19880843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 22583660 - 22583727
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||||||||||||||| |||| |||| ||||| ||  || ||||||||||||||||| |||| |||||    
T  22583660 taaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 23479134 - 23479103
Alignment:
Q  100 taaggtaagggtgggactaactttctctaatt 131  Q
    ||||||||||||||||||||||||||||||||    
T  23479134 taaggtaagggtgggactaactttctctaatt 23479103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 23889851 - 23889784
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||| |||||||| || ||||||||||||||| ||  || ||||||||||||||||| |||| |||||    
T  23889851 taagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 12577931 - 12577901
Alignment:
Q  100 taaggtaagggtgggactaactttctctaat 130  Q
    |||||||||||||||||||||||||||||||    
T  12577931 taaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Original strand, 22610267 - 22610297
Alignment:
Q  100 taaggtaagggtgggactaactttctctaat 130  Q
    |||||||||||||||||||||||||||||||    
T  22610267 taaggtaagggtgggactaactttctctaat 22610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 21514752 - 21514695
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattct 148  Q
    ||||||| ||||||||||||||||||||  |||||||||| || | || |||||||||    
T  21514752 catctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 38184695 - 38184740
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||    
T  38184695 ttaaggtaagggtgagactaactctcaataattataaattatataa 38184740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 149; Significance: 9e-79; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 70 - 262
Target Start/End: Complemental strand, 34421 - 34229
Alignment:
Q  70 agcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttg 169  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||||||||||||||||||||||    
T  34421 agcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaattgagtttagcatgttg 34322  T
Q  170 taggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  34321 taggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattga 34229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 6002 - 5921
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || ||||||||||||||||| |||| ||||||||||| |||||||    
T  6002 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 9e-79; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 68 - 256
Target Start/End: Original strand, 5031097 - 5031285
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  5031097 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 5031196  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  5031197 tgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcgttgaatttgtgtag 5031285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 69 - 256
Target Start/End: Original strand, 24780809 - 24780996
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||      
T  24780809 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgaa 24780908  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24780909 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtag 24780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 72 - 262
Target Start/End: Complemental strand, 9976009 - 9975819
Alignment:
Q  72 caatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgta 171  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  9976009 caatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 9975910  T
Q  172 ggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||  | ||||||||||||| |||||    
T  9975909 ggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaatccgctgaatttgtgtagaattga 9975819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 24436731 - 24436538
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||    
T  24436731 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttgtataattctgaaattgagtttagcatgtt 24436632  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||    
T  24436631 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 24436538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 79 - 262
Target Start/End: Complemental strand, 17307559 - 17307376
Alignment:
Q  79 gtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgta 178  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||    
T  17307559 gtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgta 17307460  T
Q  179 gttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  17307459 gttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 17307376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 73 - 252
Target Start/End: Original strand, 22251421 - 22251600
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    |||||||||||||| || ||||||||||||||||||||||  ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  22251421 aatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 22251520  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgt 252  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22251521 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 24516238 - 24516076
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24516238 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 24516139  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  24516138 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 24516076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 100 - 256
Target Start/End: Complemental strand, 40912372 - 40912216
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912372 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40912273  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    | | ||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  40912272 ggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtag 40912216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 2523716 - 2523909
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| |||||||||||| ||||||    
T  2523716 gagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgtt 2523815  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||| |||||||||||||| |||||| | || || |||||||||||| |||||||||||||||||  |||||||||||| || |||||    
T  2523816 gtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaattcgttgaatttgtgcagaattga 2523909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 19201191 - 19201362
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatt 190  Q
    |||||||  |||| |||||||| |||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  19201191 catctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttataggaatt 19201290  T
Q  191 tgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||    
T  19201291 tgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattga 19201362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 37270747 - 37270600
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |     
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg 37270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 27484517 - 27484639
Alignment:
Q  140 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  27484517 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 27484616  T
Q  240 atgttgaatttgtgtagtattga 262  Q
      ||||||||||||||| |||||    
T  27484617 ccgttgaatttgtgtagaattga 27484639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 36841268 - 36841154
Alignment:
Q  148 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaa 247  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  248 tttgtgtagtattga 262  Q
    ||||||||| |||||    
T  36841168 tttgtgtagaattga 36841154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 25142256 - 25142133
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| |  ||||||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  25142256 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 25142157  T
Q  199 agatattgaagttgtaattggttg 222  Q
    || | | |||||||||||||||||    
T  25142156 aggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 224
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgta 171  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| | || ||||||||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  172 ggttgtagttatgggaatttggg-aattagatattgaagttgtaattggttgtt 224  Q
    |||||||||| |  ||||||||| ||||||   | |||||||| ||||||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 224
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgta 171  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| | || ||||||||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  172 ggttgtagttatgggaatttggg-aattagatattgaagttgtaattggttgtt 224  Q
    |||||||||| |  ||||||||| ||||||   | |||||||| ||||||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 27852747 - 27852605
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgt 167  Q
    ||||| ||||||||||||||| ||    || |||||||||||||||||||||||||||||||| ||| |  ||||||||||||| |||| |||| || ||    
T  27852747 gagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagt 27852652  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgta 214  Q
    |||||||||| ||| |||||||||||||||||||| | |||||||||    
T  27852651 tgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 249
Target Start/End: Complemental strand, 3539889 - 3539740
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| |  |||||||||| |||| || |||| || |||||||||||||||| | |||||||| |||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatt 3539790  T
Q  199 agatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatt 249  Q
    || | | ||||||||||||||||| |   ||||||| ||||||||||||||    
T  3539789 aggtttagaagttgtaattggttgatttaagagtag-aaatatgttgaatt 3539740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 357933 - 357809
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| | | |||||||||||||    
T  357933 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 357834  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
    | | | |||||||||||||||||||    
T  357833 ggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  102 aggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaga 201  Q
    ||||||||||| |||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||||||||||||     
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  202 tattgaagttgtaattggttgtt 224  Q
    | | |||||||||||||||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 21369377 - 21369316
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaa 129  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||    
T  21369377 tgagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaa 21369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 149474 - 149549
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattct 148  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||| || | || |||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattct 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 14179697 - 14179758
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||| ||||    
T  14179697 gagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 44072609 - 44072509
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||| ||||||||||| |||||| | || | ||| ||| || ||||||| ||||||| |||||||||||||||| ||||||||||| ||||    
T  44072609 taaggtaagggtgagactaactttcactaattct-aagtgtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatt 44072511  T
Q  199 ag 200  Q
    ||    
T  44072510 ag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 36841310 - 36841267
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtg 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  36841310 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 25046170 - 25046088
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || ||||||||||| |||||  |||| ||||||||||| |||||||    
T  25046170 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagtt 25046088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 31521252 - 31521187
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattata 134  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||| | |||||||||  ||||||||    
T  31521252 gagcaatcttgtacagtccgatcatctaatttagggtaagggtgaggctaactttcaataattata 31521187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 14183436 - 14183496
Alignment:
Q  70 agcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||| || | ||||| |||||||||||||||||||||||||||||| |||| ||||    
T  14183436 agcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 21080969 - 21081021
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  21080969 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 18390229 - 18390314
Alignment:
Q  115 actaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 200  Q
    ||||||||||||||||| ||| | ||||||||||| |||| || |||| || | |||| ||||||||| ||||||||||||||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaag-tgtatgttgtagttttgggaatttgggaattag 18390314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 5986229 - 5986128
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||| ||| |||| ||||| ||| || |||||||||| ||||||  |||| || |||||||||| ||||| || | ||||| |||||    
T  5986229 taaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatt 5986130  T
Q  199 ag 200  Q
    ||    
T  5986129 ag 5986128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 19358943 - 19358820
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 197  Q
    ||||||||||||||||||||| ||   ||||| | | | |||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| |||    
T  19358943 taaggtaagggtgggactaacctttaataattctgagt-atatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaat 19358845  T
Q  198 tagatattgaagttgtaattggttg 222  Q
    |||   | |||||||||||||||||    
T  19358844 tagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 14694383 - 14694296
Alignment:
Q  95 taatttaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagtt 181  Q
    |||| ||||||||||||| |||||||||||| ||||| ||| | || ||||| || ||||||  |||| |||| ||||||||||||||    
T  14694383 taatctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt 14694296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 20916390 - 20916339
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaac 120  Q
    ||||||||||||||||  ||| |||||||||||| |||||||||| ||||||    
T  20916390 gagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaac 20916339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 23801557 - 23801518
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  23801557 catctaatctaaggtaagggtgggactagctttctctaat 23801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 18388227 - 18388289
Alignment:
Q  138 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||| ||||||||| |||  |||| || |||||||||||||||| |||||||||||||||||    
T  18388227 tatatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatta 18388289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgt 223  Q
    ||||||||||||| ||  |||||||||||||| | | ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 12626399 - 12626447
Alignment:
Q  73 aatcttgtagagtccgaccat-ctaatttaaggtaagggtgggactaac 120  Q
    ||||||||||||||||| ||| | ||| |||||||||||||||||||||    
T  12626399 aatcttgtagagtccgatcattcaaatgtaaggtaagggtgggactaac 12626447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 21315476 - 21315528
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  21315476 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 21335266 - 21335318
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  21335266 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 25184241 - 25184189
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| |||||||||||||||||| ||| |  | |||||||||||    
T  25184241 taaggtaagggtgagactaactttctctaattctaagtattttaattctgaaa 25184189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 69 - 256
Target Start/End: Original strand, 4683 - 4870
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  4683 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 4782  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  4783 gtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtag 4870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 144; Significance: 8e-76; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 69 - 256
Target Start/End: Complemental strand, 32077 - 31890
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  32077 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 31978  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
     ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  31977 ataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtag 31890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 69 - 256
Target Start/End: Complemental strand, 37384 - 37197
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  37384 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 37285  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
     ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  37284 ataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtag 37197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 73 - 255
Target Start/End: Complemental strand, 77766 - 77584
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    |||||||||||||| || |||||||| ||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  77766 aatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 77667  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    |||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  77666 gttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgta 77584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 262
Target Start/End: Complemental strand, 58829 - 58636
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||||    
T  58829 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagtttagcatgtt 58730  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||    
T  58729 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaattga 58636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 11251 - 11436
Alignment:
Q  77 ttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttg 176  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||    
T  11251 ttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtatatttctgaaattgagtttagcatgttgtaggttg 11350  T
Q  177 tagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  11351 tagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 11436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 262
Target Start/End: Original strand, 21762 - 21955
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| || |||| |||||||||||| |||||||||||    
T  21762 gagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatagttctgaaattgaatttagcatgtt 21861  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  21862 gtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagttgaatttgtgtagaattga 21955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 70 - 262
Target Start/End: Complemental strand, 1287 - 1095
Alignment:
Q  70 agcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttg 169  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  1287 agcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttg 1188  T
Q  170 taggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||    
T  1187 taggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattga 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 8e-70; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 21300017 - 21300206
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    || ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  21300117 gtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattga 21300206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 68 - 262
Target Start/End: Complemental strand, 19921728 - 19921528
Alignment:
Q  68 tgagcaatcttgtagagtccgaccatctaatttaaggtaagggtggga------ctaactttctctaattataaattatataattctgaaattgagttta 161  Q
    |||||||||| |||||| |||| |||||||| ||||||||||||||||      ||| |||||||||||| ||| || ||||||||||||||||||||||    
T  19921728 tgagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgagttta 19921629  T
Q  162 gcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 261  Q
     |||||||||||||||| |||||| |||||||||||||| | |||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  19921628 acatgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtagaattg 19921529  T
Q  262 a 262  Q
    |    
T  19921528 a 19921528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 20566598 - 20566445
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| ||||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||||||||||        |||||    
T  20566598 taaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg--------aatta 20566507  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 261  Q
    | | ||||||||||||||||||||||||||| ||||||||  || |||||||||||| ||||    
T  20566506 ggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 31622201 - 31622038
Alignment:
Q  70 agcaatcttgtagagtccga--ccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 167  Q
    ||||| ||||||||||| ||  ||||||||| |||||||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||    
T  31622201 agcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgt 31622102  T
Q  168 tgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaat 239  Q
    ||| | |||||        |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  31622101 tgttgtttgta--------aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaat 31622038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  95 taatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 194  Q
    |||||||||||||||||| |||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||||||    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  195 aattagatattgaagttgtaattggttgtt 224  Q
    |||||  | | |||||||||||||||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 23199176 - 23199259
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  23199176 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 21617928 - 21618029
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| | |||||| |||  ||||||| |||| || |||||||||||||||| |||||||||| |||||    
T  21617928 taaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatt 21618027  T
Q  199 ag 200  Q
    ||    
T  21618028 ag 21618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 20469176 - 20469277
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| | |||||| |||| ||||||  |||| || |||||||||||||||| |||| | ||| |||||    
T  20469176 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatt 20469275  T
Q  199 ag 200  Q
    ||    
T  20469276 ag 20469277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 21398613 - 21398674
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| || |||||||||||    
T  21398613 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 31457012 - 31456888
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| |  ||| ||||||||| ||  |||| ||    ||||||||||||| ||| ||||||| |||||    
T  31457012 taaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatta 31456913  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
    | | | |||||||||||||||||||    
T  31456912 ggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 22111881 - 22111810
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 170  Q
    |||| |||||||||||| ||||||||||||||| |   || ||||||| |||||||||||||||||||||||    
T  22111881 ttaacgtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgt 22111810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 25249828 - 25249910
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagtt 181  Q
    |||||||||||| |||||||| |||| ||||| ||| ||||||||||||| ||||||  |||| ||||||||||||| |||||    
T  25249828 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 25313612 - 25313694
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagtt 181  Q
    |||||||||||| |||||||| |||| ||||| ||| ||||||||||||| ||||||  |||| ||||||||||||| |||||    
T  25313612 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 266091 - 266038
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  266091 ttaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 32607285 - 32607346
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||| |||||| ||||  ||||||| ||||||||||||||||||| |||||||||||    
T  32607285 gagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 6551290 - 6551342
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| |||||||||||||||||| ||| || |||||||||||||    
T  6551290 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 10954141 - 10954060
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||  ||||| ||| || | ||||| ||||||||  |||| ||||||||||| |||||||    
T  10954141 taaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagtt 10954060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 8503857 - 8503913
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttct 125  Q
    ||||||||| |||||| ||||  ||||||| ||||||||||||||||||||| ||||    
T  8503857 gagcaatctcgtagagaccgattatctaatataaggtaagggtgggactaaccttct 8503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 17011780 - 17011728
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  17011780 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 18744926 - 18744874
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||||||||||||| ||   || |||||||||||||    
T  18744926 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  140 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggt 220  Q
    ||||||||||||||||  |||| || ||| |||||||||||| | |||||||| ||||||| | | |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 17876186 - 17876132
Alignment:
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgt 223  Q
    ||||||||||||| ||  |||||||||||||| | | ||||||||||||||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 21405665 - 21405751
Alignment:
Q  138 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aattagatattgaagttgtaattggttg 222  Q
    ||||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| ||||||   | |||||||||||||||||    
T  21405665 tatatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 10774664 - 10774763
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| ||| |||||| | || | ||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| |||||||    
T  10774664 taaggtaagggtgggactaaccttcactaattct-aagtgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatt 10774761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  103 ggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||| ||||||||||||| ||| || ||| |||||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 14025798 - 14025842
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataa 135  Q
    |||||||| ||||||||||||||||||||| |||| |||| ||||    
T  14025798 catctaatctaaggtaagggtgggactaaccttctttaatcataa 14025842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 22111765 - 22111729
Alignment:
Q  203 attgaagttgtaattggttgttaatagagtagaaaat 239  Q
    |||||||| |||||||||||||||||||| |||||||    
T  22111765 attgaagtcgtaattggttgttaatagagcagaaaat 22111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 73 - 252
Target Start/End: Original strand, 12506 - 12685
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 172  Q
    ||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||    
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  173 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgt 252  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  12606 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgt 12685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 103 - 262
Target Start/End: Complemental strand, 5432 - 5273
Alignment:
Q  103 ggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 202  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  203 attgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
     ||||||| ||||||||||||||||||||||||||||   |||||||||||||| |||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattga 5273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 190 - 28
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  190 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 91  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  90 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 28  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 696 - 858
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  696 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 795  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||    
T  796 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 3234 - 3072
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  3234 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatta 3135  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  3134 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 2558 - 2454
Alignment:
Q  158 tttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagt 257  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||     
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  258 attga 262  Q
    |||||    
T  2458 attga 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 13392 - 13554
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13392 taaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatta 13491  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | |||||||| |||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  13492 ggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 13554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 168999 - 169161
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  168999 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 169098  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||| |||||||| |||||||||||||||||||||  ||||||||||||||| |||||    
T  169099 ggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 169161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 143667 - 143501
Alignment:
Q  96 aatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 195  Q
    ||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  196 attagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    ||||  | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 24100 - 24231
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  24100 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 24199  T
Q  169 gtaggttgtagttatgggaatttgggaattag 200  Q
    ||||||||||||||||||||||||||||||||    
T  24200 gtaggttgtagttatgggaatttgggaattag 24231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 570 - 408
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  570 taaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 471  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  470 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 146775 - 146613
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||| ||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146775 taaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 146676  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | |||||||| |||||||||||||||||||||| ||||  ||||||||||||||| |||||    
T  146675 ggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattga 146613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 78154 - 78298
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  78154 gagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 78253  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgt 213  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||    
T  78254 gtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 1217 - 1055
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| ||||||||||  |||||| ||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  1217 taaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatta 1118  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    | | ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||    
T  1117 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattga 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 107; Significance: 1e-53; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 328279 - 328452
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattat--aaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaa 188  Q
    |||||||  |||||||||||||||||||||||||||||||| |  || || |||||||||||||||||||||||||||||| || |||||||||||| ||    
T  328279 catctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatggaaa 328378  T
Q  189 tttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattga 262  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  328379 tttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattga 328452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 75839 - 75691
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||| |||||||||||| ||||||||||||||  ||  || ||||||||||||||||||| ||||||||||| | |||||  | || |||||||||||||    
T  75839 ttaacgtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaatt 75740  T
Q  199 agatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtg 253  Q
    || |       ||||||||||||||||||||| ||||||||   |||||||||||    
T  75739 aggt------tttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 110227 - 110133
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttg 192  Q
    |||| ||||||||| |||||||||||||||||| ||| | ||||||||||| ||||||| |||| || |||||||||||||||| |||| |||||    
T  110227 ttaacgtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttg 110133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 72989 - 72841
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||| ||| |||||||| |||||||||| |||  ||  || ||||||||| ||||||||||||| ||||||| | | ||        ||||||| |||||    
T  72989 ttaacgtatgggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttagtatgttgttgttagt--------gaatttgtgaatt 72898  T
Q  199 agatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    || | ||||||||||||||||||||||||||| ||||||||   |||||||||||||    
T  72897 aggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 73172 - 73109
Alignment:
Q  69 gagcaatcttgtagagtccga--ccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  73172 gagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaat 73109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 76000 - 75963
Alignment:
Q  89 accatctaatttaaggtaagggtgggactaactttctc 126  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  76000 accatctaatctaaggtaagggtgggactagctttctc 75963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 29573 - 29711
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29573 taaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatta 29672  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaat 239  Q
    | | |||||||||||||||||||| ||||| |||||||||    
T  29673 ggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 21663 - 21539
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||||||||| |||||||||||| ||| || ||| |||| |||| ||  |||| ||  | |||| |||||||| ||| |||||||||||||    
T  21663 taaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatta 21564  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
      | | |||||||||||||||||||    
T  21563 tgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 261
Target Start/End: Complemental strand, 79132 - 78955
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  79132 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 79033  T
Q  169 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 261  Q
           |||||||        |||||||||| | ||||||||||||||||||||||||| ||||||||||   |||||||||||||| ||||    
T  79032 -------gtagtta--------tgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccattgaatttgtgtagaattg 78955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 35542 - 35418
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  35542 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatta 35445  T
Q  200 gatattgaagttgtaattggttgttaa 226  Q
    | | ||||||| |||||||||||||||    
T  35444 ggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 2638 - 2524
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 168  Q
    ||||||||| |||||| |||| |||||||| || ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  2638 gagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 2539  T
Q  169 gtaggttgtagttat 183  Q
    |||||||||||||||    
T  2538 gtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 19805 - 19652
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||| ||||||||||||| ||| || ||||||||| ||||||||||||||| |||||||| |||        ||||||||||||||    
T  19805 taaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttgggaatta 19714  T
Q  200 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 261  Q
    | | || |||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  19713 ggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 100 - 256
Target Start/End: Original strand, 112966 - 113123
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa--ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 197  Q
    |||| ||||||||||||||||||||||||||| ||| | |||||| |||||||  |||| |||| || ||||||||||||| || |||||||||||||||    
T  112966 taagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaat 113065  T
Q  198 tagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 256  Q
    ||| | | ||||||||||||||||||| | | |||||||||| ||||||||| ||||||    
T  113066 taggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtag 113123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 218
Target Start/End: Complemental strand, 81620 - 81501
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaat 197  Q
    |||||||||||||||||||||| ||| |||||| |||||   || ||||| ||| |||| |||| || |||||||||||||||| |||||||||||||||    
T  81620 ttaaggtaagggtgggactaaccttcactaattctaaatgg-atgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 81522  T
Q  198 tagatattgaagttgtaattg 218  Q
    ||| | | |||||||||||||    
T  81521 taggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 117807 - 117899
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg--aaattgagtttagcatgttgtaggttgtagttatgggaatt 190  Q
    |||||||||||||||||||||||||||||||| ||| | |||||| ||||  ||||||| |||| || |||| || ||||| || ||||||||    
T  117807 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgtaattttgggaatt 117899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  103 ggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 202  Q
    ||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| |||||||| |    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  203 attgaagttgtaattggttgtt 224  Q
     | |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 5716 - 5633
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  5716 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 19290 - 19207
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||||| ||| || |||||||||||||    
T  19290 gagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 17913 - 17992
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 2941 - 2793
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||||| | ||||        ||||||| ||||||    
T  2941 taaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaatta 2850  T
Q  200 gatattgaagttgt-aattggttgttaatagagtagaaaatatgttgaatttgtgta 255  Q
    | | ||||| | || ||||||||||||||||| ||||||||   |||||||||||||    
T  2849 ggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgta 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 1043 - 1181
Alignment:
Q  85 tccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttat 183  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||| ||| |  |||||||||| ||||||| |||| || ||||||||||| |||| |    
T  1043 tccgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagtttt 1142  T
Q  184 gggaatttgggaattagatattgaagttgtaattggttg 222  Q
    | |||||||||| ||||   | |||||||||||| ||||    
T  1143 gagaatttgggatttagggttagaagttgtaattagttg 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 5310 - 5183
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||| ||||||||||||||  ||  || ||||||||||||||||||||| ||||||||| | ||||        ||||||||||||||  |     
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaat 239  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaat 5183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 11430 - 11303
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 203  Q
    |||||||||||| ||||||||||||||  ||  || ||| ||||||||||||||||| ||||||||| | ||||        ||||||||||||||| |     
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  204 ttgaagttgtaattggttgttaatagagtagaaaat 239  Q
    ||||||||||||||||||||||||||| ||||||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaat 11303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 254
Target Start/End: Complemental strand, 19759 - 19605
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||| ||||| |||||| ||| ||||||||||  ||  |||||||||||||||||||||||||||||||||| | ||||   | || ||||||| |||||    
T  19759 ttaacgtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaatt 19660  T
Q  199 agatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgt 254  Q
    || |  |||||||||||||| ||||||||| | ||||||||   ||||||||||||    
T  19659 aggttatgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 5537 - 5454
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||| |||||| || | |||||||| ||||||||||||||||||| ||||||||||| || | || |||||||||||||    
T  5537 gagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 11699 - 11639
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaa 129  Q
    ||||||||| | |||| |||| |||||||| |||| ||||||||||||||| |||||||||    
T  11699 gagcaatctcgcagagaccgatcatctaatgtaagataagggtgggactaaatttctctaa 11639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 19939 - 19878
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||| |||||  |||| |||||||| |||||||||||| ||||||  ||||||||||    
T  19939 gagcaatctcgtagaaaccgatcatctaatctaaggtaagggtaggactagatttctctaat 19878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 135504 - 135625
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| ||| |||||| ||| |  ||||||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagtg-tataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  199 agatattgaagttgtaattggtt 221  Q
    |||  | ||||||| ||||||||    
T  135603 agagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 10755 - 10877
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||| ||||| ||  |||| || |||||||||| ||||| |||||||||||||||||    
T  10755 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatta 10852  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
    |   | |||||||||||||||||||    
T  10853 gggttagaagttgtaattggttgtt 10877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 5045 - 5120
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggtt 175  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||| ||||| ||  |||| || ||||||||||    
T  5045 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 2423 - 2506
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  2423 gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 61821 - 61900
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| ||| || |||||||||||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  106 aagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatatt 205  Q
    |||||||||||||| ||| ||||||| ||| || ||| ||||||||| ||  |||| ||||| ||||||||||||| ||| ||||||| |||||| | |     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  206 gaagttgtaattggttgtt 224  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 4709 - 4830
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| |  |||||||||| ||||||| |||| || ||||||||||| ||||   ||||||||| ||||    
T  4709 taaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatt 4808  T
Q  199 agatattgaagttgtaattggt 220  Q
    || | | |||||||| ||||||    
T  4809 aggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 10851 - 10741
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||| |||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||||| | ||||        |||||||||||||    
T  10851 ttaatgtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaatt 10760  T
Q  199 agatattgaagttgtaatt 217  Q
    || | ||||||||||||||    
T  10759 aggttttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 11030 - 10969
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||| || || |||||||| |||||||||||||| |||| |||||||||||    
T  11030 gagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 18613 - 18670
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 20006 - 19906
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||||||||||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||||||| |||| ||||| |||||    
T  20006 taaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaatt 19908  T
Q  199 ag 200  Q
    ||    
T  19907 ag 19906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 23861 - 23922
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||    
T  23861 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 8694 - 8571
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aat 197  Q
    ||||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||| |||    
T  8694 taaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  198 tagatattgaagttgtaattggttg 222  Q
    |||   | |||||||||||||||||    
T  8595 tagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 26638 - 26767
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 202  Q
    |||||||||||| ||||||||| ||||| ||  || |||||||||| ||||||||||||||||||||| | ||||        ||||||||||||||| |    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggt 26729  T
Q  203 attgaagttgtaa-ttggttgttaatagagtagaaaat 239  Q
     ||||| | |||| ||||||||||||||||||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaat 26767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 106051 - 106175
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||| |||||||||||||||||| ||| || ||| |||| |||| ||  |||| || || ||||  ||||||| ||| |||||||||||||    
T  106051 taaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatta 106150  T
Q  200 gatattgaagttgtaattggttgtt 224  Q
    | | | || ||||||||||||||||    
T  106151 ggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 13525 - 13572
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaac 120  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13525 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  101 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||||||||||||| |||  ||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| ||||||||| |||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagtg-tattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  200 gatattgaagttgtaattggttg 222  Q
    |   | |||||||||||||||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 60947 - 60846
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||||| || ||||||| |||| ||||| ||| || ||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| |||||    
T  60947 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 60848  T
Q  199 ag 200  Q
    ||    
T  60847 ag 60846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 2071 - 2143
Alignment:
Q  150 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttg 222  Q
    ||||||| |||| ||||||||||||||||||| ||| |||||||||||||| | |  ||||||||||||||||    
T  2071 aaattgaatttaacatgttgtaggttgtagttttggaaatttgggaattaggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 7329 - 7205
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg-gaat 197  Q
    |||||| |||||||||||||| |||| ||||| ||| || |||||||||| ||||||  |||  ||||||||||||| ||||| |||||||||||  |||    
T  7329 taaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaat 7230  T
Q  198 tagatattgaagttgtaattggttg 222  Q
    |||   | |||||||||||||||||    
T  7229 tagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 126305 - 126404
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    |||||||||| ||||||||||||||||||||| ||| || ||| ||||||||||||  |||| || ||||||| |||||||| || | ||||| ||||||    
T  126305 taaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaatta 126403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 2960 - 2881
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||| || ||| |||| ||||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 1855 - 1917
Alignment:
Q  108 gggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 170  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||||| |||| ||||||||    
T  1855 gggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 20086 - 20202
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||| ||||||||| ||| |||||| | || | |||||||||| ||||||| |||| || |||||||||| ||||| ||||||||||||||||    
T  20086 taaggtaagggcgggactaaccttcactaattct-aagtgtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatt 20183  T
Q  199 agatattgaagttgtaatt 217  Q
    |  | | ||||||||||||    
T  20184 atgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 67173 - 67075
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 197  Q
    |||||||| |||||||||||||||||||||||  || |  |||||||||| ||||||  |||| ||  ||||||||||||||| | |||||||||||||    
T  67173 taaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaat 67075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 2191 - 2252
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||  |||||||||||||||||||| ||||||||||| ||| || |||||||||||||    
T  2191 catctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 5296 - 5353
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattct 148  Q
    |||||||  |||||||||||||||||||||||||||||||| ||| || |||||||||    
T  5296 catctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  105 taagggtgggactaactttctctaattataaattatataattctgaaatt 154  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 9111 - 9012
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||||||||||||||||||| |||  ||||| | | | || ||||||||||| ||  |||| || |||||||||||||||| | |||||||||||||||    
T  9111 taaggtaagggtgggactaaccttcagtaattctgagt-atgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaatta 9013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 5081 - 5029
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  144 attctgaaattgagtttagcatg-ttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgt 223  Q
    ||||||||||||| |||| |||| ||||||||||||||| ||| |||||| ||||||| | | ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 11130 - 11190
Alignment:
Q  70 agcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    ||||||||| ||| |||||| || |||||||||||||||| |||||||| |||||||||||    
T  11130 agcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 5081 - 5029
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 15324 - 15272
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| || ||| |||||||||    
T  15324 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 69853 - 69905
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  69853 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 69905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 28634 - 28583
Alignment:
Q  69 gagcaatcttgtagagtccgaccatctaatttaaggtaagggtgggactaac 120  Q
    ||||||||||||||||||| | |||||||| ||||||||| |||||||||||    
T  28634 gagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaac 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 4992 - 4910
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||| || ||||||||||| | |||  |||| ||||||||||| |||||||    
T  4992 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagtt 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 398614 - 398532
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 181  Q
    ||||||||||||||||||||| |||| ||||| ||  || ||||||||||| |||||  |||| ||||||||||| |||||||    
T  398614 taaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagtt 398532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 4437 - 4336
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||||||| | |||||||||| |||| ||||| ||| || ||||||||||| || ||  |||| ||||||||||||||||||| || | ||||| |||||    
T  4437 taaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaatt 4338  T
Q  199 ag 200  Q
    ||    
T  4337 ag 4336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 6620 - 6669
Alignment:
Q  187 aatttgggaattagatattgaagttgtaattggttgttaatagagtagaa 236  Q
    |||||||||||||| | |||| || |||||||||||||||||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaa 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 31160 - 31061
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| |||  ||||| |  | ||| |||||||| ||||||  |||| || |||||||||||||||| ||||||||||||||||    
T  31160 taaggtaagggtgggactaaccttcaataattct-gagtatgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaatt 31063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 158822 - 158922
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| |||  ||||| | | | |||| ||||| ||| |||  |||| || |||||||||||||||| ||||||||||||||||    
T  158822 taaggtaagggtgggactaaccttcaataattctgagt-atatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatt 158920  T
Q  199 ag 200  Q
    ||    
T  158921 ag 158922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 96446 - 96369
Alignment:
Q  104 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 181  Q
    |||| ||||||||||||||||||||||| | | || ||| ||||||||| ||  |||| || ||||||||||||||||    
T  96446 gtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagtt 96369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 195 - 227
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaatt 131  Q
    |||||||||||||||||||||||||||||||||    
T  195 ttaaggtaagggtgggactaactttctctaatt 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 9012 - 8960
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  9012 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 21149 - 21097
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  21149 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 34164 - 34112
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  34164 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 29440 - 29340
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||  |||| ||||| ||| || ||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| |||||    
T  29440 taaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 29341  T
Q  199 a 199  Q
    |    
T  29340 a 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 127310 - 127373
Alignment:
Q  69 gagcaatcttgtagagtccg--accatctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||| ||||||||||| |  | |||||||| ||||||||||||||||||| |||||||||||    
T  127310 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 127373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 3413 - 3452
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  3413 catctaatctaaggtaagggtgggactagctttctctaat 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 4997 - 4958
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaat 130  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  4997 catctaatataaggtaagggtgggactagctttctctaat 4958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 13455 - 13392
Alignment:
Q  138 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 200  Q
    ||||| ||||||||| |||| |||| || ||||||||||| |||| ||||||||||||||||||    
T  13455 tatatgattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattag 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 11682 - 11635
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataatt 146  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  11682 ttaaggtaagggtgagactaactctcaataattataaattatataatt 11635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  73 aatcttgtagagtccgaccatctaatttaaggtaagggtg 112  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 4690 - 4612
Alignment:
Q  144 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttg 222  Q
    ||||| ||||||| |||| || ||| |||||||| ||| |||||||||| ||||||| | | |||||||||||| ||||    
T  4690 attctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgtaattagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 35501 - 35563
Alignment:
Q  138 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 199  Q
    ||||| ||||||||| |||| |||| ||  ||||||||||||||| |||||||||||||||||    
T  35501 tatatgattctgaaaattgaatttaacaacttgtaggttgtagttttgggaatttgggaatta 35563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 510 - 449
Alignment:
Q  140 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattag 200  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| ||||||||||||    
T  510 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattag 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 5418 - 5319
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    ||||||||||||||||||||| ||| |||||| | || | ||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| |||||||    
T  5418 taaggtaagggtgggactaaccttcactaattct-aagtgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatt 5321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 654 - 609
Alignment:
Q  99 ttaaggtaagggtgggactaactttctctaattataaattatataa 144  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||    
T  654 ttaaggtaagggtgagactaactctcaataattataaattatataa 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 52544 - 52645
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 198  Q
    |||| |||||||||||||||| |||  ||||| ||| || | ||||||||| |||||  |||| ||||||||||| ||||||| || | ||||| |||||    
T  52544 taagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaatt 52643  T
Q  199 ag 200  Q
    ||    
T  52644 ag 52645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 14577 - 14638
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||| ||||||||||||| ||||| ||||||||||| ||   || |||||||||||||    
T  14577 catctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 23635 - 23696
Alignment:
Q  91 catctaatttaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    |||||||| ||||||||||||| ||||| ||||||||||| ||   || |||||||||||||    
T  23635 catctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 26776 - 26727
Alignment:
Q  103 ggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| ||||||||||||||| ||  || |||||||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 1128 - 1076
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||||||| ||||| ||||||||||| ||  ||| |||||||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaa 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 29216 - 29268
Alignment:
Q  100 taaggtaagggtgggactaactttctctaattataaattatataattctgaaa 152  Q
    ||||||||| |||||||||||||||||||||| ||| |  | |||||||||||    
T  29216 taaggtaagagtgggactaactttctctaattctaagtattttaattctgaaa 29268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University