View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11309A_low_23 (Length: 438)

Name: NF11309A_low_23
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11309A_low_23
NF11309A_low_23
[»] chr3 (50 HSPs)
chr3 (1-168)||(38622875-38623043)
chr3 (303-384)||(42098431-42098512)
chr3 (303-383)||(29720569-29720649)
chr3 (303-384)||(900892-900973)
chr3 (303-384)||(29455512-29455593)
chr3 (303-381)||(16434664-16434742)
chr3 (303-384)||(34263508-34263589)
chr3 (303-384)||(34555325-34555406)
chr3 (303-384)||(12948214-12948295)
chr3 (303-384)||(46866517-46866598)
chr3 (303-384)||(50673851-50673932)
chr3 (303-384)||(53274799-53274880)
chr3 (303-377)||(9484770-9484844)
chr3 (303-381)||(29793185-29793263)
chr3 (303-384)||(14750864-14750945)
chr3 (303-384)||(20144726-20144807)
chr3 (303-384)||(48927606-48927687)
chr3 (303-384)||(49076230-49076311)
chr3 (303-382)||(12250477-12250556)
chr3 (303-384)||(29444857-29444938)
chr3 (303-384)||(38833517-38833598)
chr3 (303-384)||(38878282-38878363)
chr3 (306-384)||(34669785-34669863)
chr3 (303-367)||(36178957-36179021)
chr3 (303-386)||(29809518-29809601)
chr3 (303-384)||(2643074-2643155)
chr3 (303-384)||(4228992-4229073)
chr3 (165-203)||(38622825-38622863)
chr3 (303-384)||(4945655-4945736)
chr3 (303-384)||(28958803-28958884)
chr3 (303-364)||(33462879-33462940)
chr3 (303-384)||(49818931-49819012)
chr3 (303-363)||(18013295-18013355)
chr3 (303-363)||(32961420-32961480)
chr3 (303-367)||(36594239-36594303)
chr3 (303-367)||(43399000-43399064)
chr3 (302-365)||(43170147-43170210)
chr3 (306-384)||(34680359-34680437)
chr3 (303-384)||(9997684-9997765)
chr3 (303-384)||(10228533-10228614)
chr3 (303-367)||(1778535-1778599)
chr3 (303-367)||(29588549-29588613)
chr3 (303-367)||(43394380-43394444)
chr3 (307-366)||(3817901-3817960)
chr3 (307-366)||(47339906-47339965)
chr3 (303-365)||(36364586-36364648)
chr3 (303-384)||(4465055-4465136)
chr3 (303-384)||(10106188-10106269)
chr3 (303-384)||(26759652-26759733)
chr3 (303-367)||(53020002-53020066)
[»] scaffold0221 (1 HSPs)
scaffold0221 (303-384)||(5550-5631)
[»] chr8 (35 HSPs)
chr8 (303-384)||(761724-761805)
chr8 (303-384)||(14378493-14378574)
chr8 (303-384)||(21132734-21132815)
chr8 (303-384)||(38842337-38842418)
chr8 (303-384)||(23437619-23437700)
chr8 (303-384)||(23547242-23547323)
chr8 (303-384)||(28583108-28583189)
chr8 (303-384)||(29708735-29708816)
chr8 (303-384)||(30464606-30464687)
chr8 (303-383)||(4326926-4327006)
chr8 (303-381)||(25691406-25691484)
chr8 (303-384)||(44039999-44040080)
chr8 (303-383)||(42149957-42150037)
chr8 (303-361)||(15870349-15870407)
chr8 (303-384)||(44887521-44887602)
chr8 (303-375)||(43184593-43184665)
chr8 (303-384)||(11756952-11757033)
chr8 (303-384)||(29616132-29616213)
chr8 (303-384)||(37094306-37094387)
chr8 (303-384)||(43049075-43049156)
chr8 (303-384)||(44362095-44362176)
chr8 (303-384)||(8496692-8496773)
chr8 (303-384)||(14583727-14583808)
chr8 (303-384)||(27302036-27302117)
chr8 (303-384)||(38036664-38036745)
chr8 (303-363)||(5777387-5777441)
chr8 (303-384)||(18419172-18419253)
chr8 (315-384)||(44947191-44947260)
chr8 (303-363)||(4960325-4960385)
chr8 (310-384)||(11538870-11538944)
chr8 (303-367)||(67269-67333)
chr8 (303-351)||(17523977-17524025)
chr8 (303-367)||(20671430-20671494)
chr8 (303-335)||(25009318-25009350)
chr8 (303-363)||(25866243-25866303)
[»] chr6 (21 HSPs)
chr6 (303-384)||(6142320-6142401)
chr6 (303-384)||(16969553-16969634)
chr6 (303-384)||(995737-995818)
chr6 (303-384)||(2397944-2398025)
chr6 (303-384)||(2667138-2667219)
chr6 (303-384)||(17496141-17496222)
chr6 (303-384)||(2913071-2913152)
chr6 (303-384)||(6188469-6188550)
chr6 (303-384)||(29514840-29514921)
chr6 (303-384)||(2141742-2141823)
chr6 (304-384)||(24798359-24798439)
chr6 (303-384)||(9023014-9023095)
chr6 (303-375)||(2656492-2656564)
chr6 (303-384)||(24825339-24825420)
chr6 (303-384)||(30699435-30699517)
chr6 (303-384)||(32541290-32541371)
chr6 (303-384)||(35117450-35117531)
chr6 (304-384)||(33347950-33348030)
chr6 (303-367)||(10105985-10106049)
chr6 (303-351)||(4889972-4890020)
chr6 (303-351)||(12677154-12677202)
[»] chr4 (40 HSPs)
chr4 (303-384)||(48380930-48381011)
chr4 (303-383)||(28914542-28914622)
chr4 (303-382)||(39332640-39332719)
chr4 (306-384)||(46608391-46608469)
chr4 (303-384)||(3708427-3708508)
chr4 (303-384)||(43447339-43447420)
chr4 (303-381)||(55631686-55631764)
chr4 (303-384)||(8525224-8525305)
chr4 (303-384)||(10385022-10385103)
chr4 (303-384)||(31152835-31152916)
chr4 (303-384)||(40411416-40411497)
chr4 (303-384)||(48652646-48652727)
chr4 (303-384)||(39171132-39171213)
chr4 (303-384)||(37667582-37667663)
chr4 (303-386)||(29821224-29821307)
chr4 (303-384)||(37164191-37164272)
chr4 (303-380)||(43047561-43047638)
chr4 (303-384)||(28988202-28988283)
chr4 (303-380)||(51306046-51306123)
chr4 (303-384)||(1377982-1378063)
chr4 (303-384)||(6520609-6520690)
chr4 (303-381)||(31657168-31657246)
chr4 (303-384)||(23605710-23605791)
chr4 (303-384)||(28898879-28898960)
chr4 (303-367)||(50685094-50685158)
chr4 (303-386)||(39260526-39260609)
chr4 (303-361)||(1981212-1981270)
chr4 (303-360)||(1613050-1613107)
chr4 (303-384)||(2805979-2806060)
chr4 (303-384)||(4271822-4271903)
chr4 (327-384)||(37381017-37381074)
chr4 (303-384)||(39376676-39376757)
chr4 (303-384)||(44210323-44210404)
chr4 (303-367)||(24334203-24334267)
chr4 (303-367)||(47833969-47834033)
chr4 (303-384)||(11260876-11260957)
chr4 (303-384)||(17492841-17492922)
chr4 (303-384)||(24505685-24505766)
chr4 (303-383)||(1615713-1615793)
chr4 (303-367)||(37588355-37588419)
[»] chr2 (32 HSPs)
chr2 (303-384)||(41319732-41319813)
chr2 (303-384)||(10333386-10333467)
chr2 (303-384)||(31603225-31603306)
chr2 (303-384)||(40471910-40471991)
chr2 (303-384)||(41437006-41437087)
chr2 (303-384)||(42754163-42754244)
chr2 (303-377)||(4137583-4137657)
chr2 (303-384)||(5096422-5096503)
chr2 (303-380)||(7724422-7724499)
chr2 (303-377)||(38963969-38964043)
chr2 (303-384)||(1748980-1749061)
chr2 (303-383)||(8373608-8373688)
chr2 (303-384)||(11277708-11277789)
chr2 (303-384)||(20917735-20917816)
chr2 (303-384)||(20682816-20682897)
chr2 (303-384)||(37317050-37317131)
chr2 (303-380)||(37987748-37987825)
chr2 (303-384)||(6729911-6729992)
chr2 (303-363)||(16333653-16333713)
chr2 (303-354)||(12209163-12209214)
chr2 (303-367)||(11383870-11383934)
chr2 (303-363)||(16125912-16125972)
chr2 (303-363)||(45036537-45036597)
chr2 (303-386)||(2831882-2831965)
chr2 (303-384)||(7601205-7601286)
chr2 (303-384)||(22718351-22718432)
chr2 (303-384)||(41575736-41575817)
chr2 (303-383)||(16646420-16646500)
chr2 (303-361)||(26436518-26436576)
chr2 (303-384)||(16127589-16127670)
chr2 (303-384)||(25627197-25627278)
chr2 (303-367)||(44022442-44022506)
[»] chr1 (36 HSPs)
chr1 (303-384)||(45299493-45299574)
chr1 (303-384)||(5606204-5606285)
chr1 (303-384)||(7075143-7075224)
chr1 (303-384)||(44741517-44741598)
chr1 (303-384)||(2138842-2138923)
chr1 (303-384)||(8250656-8250737)
chr1 (303-384)||(10100326-10100407)
chr1 (303-384)||(10124283-10124364)
chr1 (303-384)||(26544042-26544123)
chr1 (303-384)||(52749455-52749536)
chr1 (303-384)||(36035860-36035941)
chr1 (302-384)||(6017262-6017344)
chr1 (303-384)||(5945939-5946020)
chr1 (303-384)||(23393406-23393487)
chr1 (303-384)||(31651714-31651795)
chr1 (303-367)||(1821459-1821523)
chr1 (303-384)||(8048561-8048642)
chr1 (303-367)||(43452995-43453059)
chr1 (303-384)||(44240693-44240774)
chr1 (303-366)||(28490334-28490397)
chr1 (303-384)||(26476822-26476903)
chr1 (303-384)||(38786759-38786840)
chr1 (303-384)||(41855535-41855615)
chr1 (303-363)||(23337980-23338040)
chr1 (303-367)||(41414377-41414441)
chr1 (303-367)||(52141883-52141947)
chr1 (303-361)||(4489235-4489293)
chr1 (303-384)||(5117247-5117328)
chr1 (303-384)||(31931992-31932073)
chr1 (303-384)||(48389241-48389322)
chr1 (303-384)||(50014374-50014455)
chr1 (305-367)||(12685759-12685821)
chr1 (303-384)||(44963485-44963566)
chr1 (307-383)||(25815706-25815782)
chr1 (303-367)||(40058797-40058861)
chr1 (303-363)||(40883584-40883644)
[»] chr7 (23 HSPs)
chr7 (303-384)||(36820050-36820131)
chr7 (303-383)||(32345593-32345673)
chr7 (303-381)||(35693642-35693720)
chr7 (303-384)||(16806955-16807036)
chr7 (303-384)||(27621104-27621185)
chr7 (303-380)||(38069225-38069302)
chr7 (303-386)||(25273824-25273907)
chr7 (311-383)||(35265643-35265715)
chr7 (316-384)||(40232414-40232482)
chr7 (303-379)||(30462035-30462111)
chr7 (303-384)||(48448692-48448773)
chr7 (304-384)||(26651057-26651137)
chr7 (303-384)||(32972144-32972225)
chr7 (303-366)||(9173163-9173226)
chr7 (303-384)||(18756763-18756843)
chr7 (303-384)||(41007766-41007847)
chr7 (303-367)||(3123972-3124036)
chr7 (303-367)||(5842292-5842356)
chr7 (303-367)||(19817509-19817573)
chr7 (303-367)||(28016585-28016648)
chr7 (303-381)||(25571504-25571582)
chr7 (303-339)||(4620238-4620274)
chr7 (303-367)||(19327489-19327553)
[»] chr5 (39 HSPs)
chr5 (303-384)||(9936697-9936778)
chr5 (303-384)||(14607367-14607448)
chr5 (303-384)||(20023034-20023115)
chr5 (303-384)||(20040224-20040305)
chr5 (303-384)||(30721494-30721575)
chr5 (303-386)||(14633181-14633264)
chr5 (305-384)||(31190986-31191065)
chr5 (303-384)||(1780954-1781035)
chr5 (303-384)||(1831524-1831605)
chr5 (303-384)||(14057882-14057963)
chr5 (303-384)||(40316991-40317072)
chr5 (303-384)||(1098349-1098430)
chr5 (303-384)||(19344508-19344589)
chr5 (303-384)||(41262938-41263019)
chr5 (303-384)||(41410469-41410550)
chr5 (303-380)||(13548387-13548464)
chr5 (303-383)||(30351881-30351961)
chr5 (303-369)||(30211565-30211631)
chr5 (303-367)||(33402417-33402481)
chr5 (303-384)||(27675714-27675795)
chr5 (303-384)||(40080155-40080236)
chr5 (303-351)||(14140092-14140140)
chr5 (303-384)||(10465104-10465185)
chr5 (303-384)||(26801910-26801991)
chr5 (303-384)||(26809460-26809541)
chr5 (303-384)||(26824487-26824568)
chr5 (303-384)||(34170003-34170084)
chr5 (304-364)||(967369-967429)
chr5 (303-367)||(39925378-39925442)
chr5 (305-380)||(27674393-27674468)
chr5 (303-361)||(39104111-39104169)
chr5 (303-384)||(1831238-1831319)
chr5 (303-340)||(2551480-2551517)
chr5 (303-384)||(40316705-40316786)
chr5 (303-384)||(41410755-41410836)
chr5 (303-363)||(1918660-1918720)
chr5 (303-363)||(6734956-6735016)
chr5 (303-363)||(30788379-30788439)
chr5 (303-383)||(41042647-41042727)
[»] scaffold0001 (1 HSPs)
scaffold0001 (303-384)||(184140-184221)
[»] scaffold0195 (1 HSPs)
scaffold0195 (303-384)||(54-135)
[»] scaffold0500 (1 HSPs)
scaffold0500 (305-367)||(503-565)
[»] scaffold0172 (1 HSPs)
scaffold0172 (303-385)||(19543-19625)
[»] scaffold0283 (1 HSPs)
scaffold0283 (315-384)||(3169-3238)
[»] scaffold0281 (1 HSPs)
scaffold0281 (303-384)||(13279-13360)
[»] scaffold0289 (1 HSPs)
scaffold0289 (303-363)||(9297-9357)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 6e-81; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38623043 - 38622875
Alignment:
Q  1 ggagggcccaccaatgtgaacttggtcaaaccaaactacataagaagacagggttggttattcatggagttgttttgttgttactacttgtttcagcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38623043 ggagggcccaccaatgtgaacttggtcaaaccaaactacataagaagacagggttggttattaatggagttgttttgttgttactacttgtttcagcgtg 38622944  T
Q  101 taagtgagtgggggaataaacaagaagcctgatgggagt-ggtgggtacgaggagttaccaaacaaaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  38622943 taagtgagtgggggaataaacaagaagcctgatgggagtgggtgggtacgaggagttaccaaaccaaaa 38622875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 42098512 - 42098431
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42098512 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 42098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 29720569 - 29720649
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29720569 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacgga 29720649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 900973 - 900892
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  900973 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaatttggtcaactgtgtcacttattaagggacggag 900892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 29455593 - 29455512
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  29455593 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggag 29455512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 16434742 - 16434664
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacg 381  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16434742 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacg 16434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 34263589 - 34263508
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  34263589 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtatcacttattaagggacggag 34263508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 34555325 - 34555406
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  34555325 atattattcaagatatttaaactcaaaattacgcattggtatgcataattgggccaactgtgtcacttattaagggacggag 34555406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 12948214 - 12948295
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  12948214 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaattggatcaactgtgtcacttattaagagacggag 12948295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 46866517 - 46866598
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  46866517 atattattcaaaatatttaaactcaaaattacgcattggtatgcgtaattgggtcaattgtatcacttattaagggacggag 46866598  T

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Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 50673851 - 50673932
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||| |||||||    
T  50673851 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtgtcacttgttaagtgacggag 50673932  T

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Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 53274880 - 53274799
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| ||||||||||||||    
T  53274880 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactagatcacttattaagggacggag 53274799  T

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Target: chr3; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 9484770 - 9484844
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagg 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||    
T  9484770 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagg 9484844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 29793263 - 29793185
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacg 381  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||    
T  29793263 atattatttaagatatttaaactcaaaattatgcattggtatgcgtaattgggttaactgtgtcacttattaagggacg 29793185  T

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Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 14750945 - 14750864
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||   ||||||||||||||    
T  14750945 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaactggatcaactgtgtcatgtattaagggacggag 14750864  T

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Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 20144807 - 20144726
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||   ||||| ||||||||||||||    
T  20144807 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactagatcacttattaagggacggag 20144726  T

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Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 48927687 - 48927606
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| ||||||||| ||||    
T  48927687 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactaggtcacttattaagggatggag 48927606  T

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Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 49076311 - 49076230
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||| ||||||| ||||||    
T  49076311 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactagatcacttattaaggaacggag 49076230  T

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Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 12250477 - 12250556
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgg 382  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||   ||||| ||||||||||||    
T  12250477 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcagctagatcacttattaagggacgg 12250556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 29444938 - 29444857
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||| |||||| |||||||||||||  |||||| |||||||||||||||| |||||| |||||||    
T  29444938 atattattcaagatatttaaattcaaaattacgcattggtatatgtaatttggtcaactgtgtcacttattaagagacggag 29444857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 38833598 - 38833517
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||  |||| |||| |||||||||| ||||||| ||||||||||||||    
T  38833598 atattattcaagatatttaaactcaaaattacgcattaatatgtgtaaatgggtcaactatgtcacttattaagggacggag 38833517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 38878363 - 38878282
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||  |||||| ||||||||||||||    
T  38878363 atattattcaagatatttaaactcaaaattacgcattgatatacgtaattggatcaactaggtcacttattaagggacggag 38878282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 34669785 - 34669863
Alignment:
Q  306 ttattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||||| ||||||||| ||||  ||||||| |||||||||||||| ||||| ||||||||    
T  34669785 ttattcaagatatttaaactcaaaattacgcattgatatgtataattggatcaactgtgtcacttattaaaggacggag 34669863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 36179021 - 36178957
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||||||||||| ||||||||  ||| ||||||||| ||||||||||||    
T  36179021 atattattcaagatatttaaactcaaaattacgcattaatatacgtaattggatcaactgtgtca 36178957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 29809518 - 29809601
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggagag 386  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | || ||||||||||   ||||||||||||||||    
T  29809518 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagttaactgtgtcatgtattaagggacggagag 29809601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 2643155 - 2643074
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | ||||||| |||||   ||||||||||||||    
T  2643155 atattattcaagatatttaagctcaaaattatgcattggcatgcgtaatggagtcaactatgtcatgtattaagggacggag 2643074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 4229073 - 4228992
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||| | |||||| ||||||   ||||||||| ||||    
T  4229073 atattattcaagatatttaaactcaaaattatgcattggaatgcgtaatggagtcaaccgtgtcatgtattaagggatggag 4228992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 38622863 - 38622825
Alignment:
Q  165 aaaactaatctaacttaataataatgtcacaattaatgg 203  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38622863 aaaactaatctaacttaataataatgtcacaattaatgg 38622825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 4945736 - 4945655
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| |||||| || | ||||| |||||||   ||||||||||||||    
T  4945736 atattattcaagatatttaagctcaaaattatgcattggaatgcgtgatggagtcaattgtgtcatgtattaagggacggag 4945655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 28958884 - 28958803
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || |||||   ||||||||| | || ||||||||||   ||||||||||||||    
T  28958884 atattattcaagatatttaaactcaaaattatgcattaaaatgcgtaatggagttaactgtgtcatgtattaagggacggag 28958803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 33462879 - 33462940
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtg 364  Q
    |||||||||||||||||||| ||||||| || ||||||| |||| |||| ||||||||||||    
T  33462879 atattattcaagatatttaagctcaaaattatgcattggcatgcataatagggtcaactgtg 33462940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 49818931 - 49819012
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  |||| |||| | |||||||||||||   ||||||||||||||    
T  49818931 atattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaagggacggag 49819012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 18013355 - 18013295
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||||||||||||||| ||| ||| || ||||| |||||||||||||| ||||||||    
T  18013355 atattattcaagatatttaagctctaaattatgcatttgtatgcgtaattggatcaactgt 18013295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 32961420 - 32961480
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    ||||||||||| |||||||||||||||| || ||||||  ||||||||| |||||||||||    
T  32961420 atattattcaaaatatttaaactcaaaattatgcattgacatgcgtaatagggtcaactgt 32961480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 36594303 - 36594239
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||||||  ||||||||||||||    
T  36594303 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaggtcaactgtgtca 36594239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 43399000 - 43399064
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||| ||||||||||||||||||| || | |||| |||||||||| || ||||||||||||    
T  43399000 atattatttaagatatttaaactcaaaattatgtattgatatgcgtaataggatcaactgtgtca 43399064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 43170147 - 43170210
Alignment:
Q  302 aatattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgt 365  Q
    ||||||||||||||||| ||||||||||| || |||||||||| |||||| | ||||| |||||    
T  43170147 aatattattcaagatatctaaactcaaaattatgcattggtatacgtaatagagtcaattgtgt 43170210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 34680359 - 34680437
Alignment:
Q  306 ttattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||| ||||||| ||  |||||| || |||||| | |||||||||||||   ||||||||||||||    
T  34680359 ttattcaagatatttaagctcaaaattatacattggaatacgtaatagagtcaactgtgtcatgtattaagggacggag 34680437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 9997765 - 9997684
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||||||    
T  9997765 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggag 9997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 10228614 - 10228533
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||||||    
T  10228614 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggag 10228533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 1778535 - 1778599
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||| ||||||||||| ||||||| || ||||||| || |||||| | |||||||||||||    
T  1778535 atattatttaagatatttaagctcaaaattatgcattggaatacgtaatggagtcaactgtgtca 1778599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 29588549 - 29588613
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||| || ||||| |||| | |||| | |||||||||||||    
T  29588549 atattattcaagatatttaagctcaaaattatgcattagtatacataatagagtcaactgtgtca 29588613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 43394444 - 43394380
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||| ||  |||||| |||||| || ||||| |||||||||    
T  43394444 atattattcaagatatttaagctcaaaattatccattggcatgcgtgatagggtccactgtgtca 43394380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 366
Target Start/End: Original strand, 3817901 - 3817960
Alignment:
Q  307 tattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtc 366  Q
    |||||||||||||||||||||||| || ||||||  ||||||||   |||||||||||||    
T  3817901 tattcaagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgtgtc 3817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 366
Target Start/End: Complemental strand, 47339965 - 47339906
Alignment:
Q  307 tattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtc 366  Q
    |||||||||||||||||||||||| || ||||||  ||||||||   |||||||||||||    
T  47339965 tattcaagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgtgtc 47339906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 36364648 - 36364586
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgt 365  Q
    |||||||||||||||||||| ||||||| ||  |||||  ||||||||| | |||||||||||    
T  36364648 atattattcaagatatttaagctcaaaattatacattgaaatgcgtaatggagtcaactgtgt 36364586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 4465055 - 4465136
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  |||| |||| | || ||||||||||   ||||| ||||||||    
T  4465055 atattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagttaactgtgtcatatattaaaggacggag 4465136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 10106269 - 10106188
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||  || ||||||  |||||||||   |||||||||||||   ||||||||||||||    
T  10106269 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaagggacggag 10106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 26759652 - 26759733
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||   ||||  |||| |||| | |||||||||||||   ||||| ||||||||    
T  26759652 atattattcaagatatttaaactcaaaattatatattgaaatgcataatagagtcaactgtgtcatgtattaaaggacggag 26759733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 53020002 - 53020066
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||  ||||||  || ||||||  |||||||||  ||||||||||||||    
T  53020002 atattattcaagatatttagtctcaaagttatgcattgacatgcgtaataaggtcaactgtgtca 53020066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 5550 - 5631
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5550 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 8e-34; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 761724 - 761805
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  761724 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 761805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 14378574 - 14378493
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14378574 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 14378493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 21132815 - 21132734
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21132815 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 21132734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 38842337 - 38842418
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  38842337 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacggag 38842418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 23437700 - 23437619
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||| ||||||||||||||    
T  23437700 atattattcaagatatttaaactcaaaattacgcattggtatgcgtcattgaatcaactgtgtcacttattaagggacggag 23437619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 23547242 - 23547323
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||| ||||||    
T  23547242 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaagtcaactgtgtcacttattaaggaacggag 23547323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 28583189 - 28583108
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||   ||||||||||||||    
T  28583189 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaactgggtcaactgtgtcatgtattaagggacggag 28583108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 29708735 - 29708816
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||  |||||| ||||||||||||||    
T  29708735 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactaggtcacttattaagggacggag 29708816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 30464606 - 30464687
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  30464606 atattattcaagatatttaaactcaaaattacacattgatatgcgtaatttggtcaactgtgtcacttattaagggacggag 30464687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 4327006 - 4326926
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    ||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  4327006 atattattcaaaatatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaagagacgga 4326926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 25691484 - 25691406
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacg 381  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| ||| ||| |||||||||||    
T  25691484 atattattcaagatatttaaactcaaaattacacattggtatgcataattgggtcaactatgttacttattaagggacg 25691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 44039999 - 44040080
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| | |||| |||| ||||    
T  44039999 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggatggag 44040080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 42150037 - 42149957
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||  |||||| ||||| |||||||    
T  42150037 atattattcaagatatttaaactcaaaattacgcatttgtatgcgaaattgggtcaactaggtcacttattaaaggacgga 42149957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 15870349 - 15870407
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaact 361  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  15870349 atattattcaagatatttaaactcaaaattacgcattggtatgcataattgggtcaact 15870407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 44887602 - 44887521
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||  ||||||| || ||||||||||||||||| ||||||||||||||| | |||| |||||||||    
T  44887602 atattattcaagatatttatgctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacggag 44887521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 43184665 - 43184593
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaa 375  Q
    |||||||||||||||||||||||||||| ||| ||||| ||| ||||| ||| |||||||||||||| |||||    
T  43184665 atattattcaagatatttaaactcaaaattacacattgatatacgtaactggatcaactgtgtcacttattaa 43184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 11756952 - 11757033
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||| || ||||||| || ||||||| ||||||||| | |||||||||||||   ||||||||||||||    
T  11756952 atattattcaagatattcaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggag 11757033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 29616213 - 29616132
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||| || ||||||||||||   |||| |||||||||    
T  29616213 atattattcaagatatttaagctcaaaattatgcatcggtatgcgtaataggatcaactgtgtcatgtattatgggacggag 29616132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 37094306 - 37094387
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  || |||||| | ||||||||||||| | ||||||||||||||    
T  37094306 atattattcaagatatttaagctcaaaattatgcattgaaatacgtaatggagtcaactgtgtcatttattaagggacggag 37094387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 43049156 - 43049075
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  ||||||||| | ||||||||||||| | ||||||| ||||||    
T  43049156 atattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaaggtacggag 43049075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 44362095 - 44362176
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | ||||||| |||||   ||||||||||||||    
T  44362095 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactttgtcatgtattaagggacggag 44362176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 8496773 - 8496692
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || |||||| ||| |||||| ||||||||||| |||   |||| |||||||||    
T  8496773 atattattcaagatatttaagctcaaaattatgcattgatatacgtaatagggtcaactgtatcatgtattatgggacggag 8496692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 14583808 - 14583727
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||| ||||||||||| ||||||| || ||||||| ||||||||| | ||||||| |||||   ||||||||||||||    
T  14583808 atattattaaagatatttaagctcaaaattatgcattggaatgcgtaatagagtcaactatgtcatgtattaagggacggag 14583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 27302036 - 27302117
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || ||||||  ||||||||| ||||||| ||| |||   |||| |||||||||    
T  27302036 atattattcaagatatttaaactcaaaattatgcattgacatgcgtaatagggtcaattgtatcatgtattatgggacggag 27302117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 38036745 - 38036664
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||||||    
T  38036745 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggag 38036664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 5777441 - 5777387
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||||||||||||||||||||||| |||      |||||||||||||||||||||||    
T  5777441 atattattcaagatatttaaactcaaaattac------gtatgcgtaattgggtcaactgt 5777387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 18419172 - 18419253
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| ||  |||||| |||| |||| | |||||||||||||   ||||||||| ||||    
T  18419172 atattattcaagatatttaatctcaaaattatacattggaatgcataatggagtcaactgtgtcatgtattaagggaaggag 18419253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 44947191 - 44947260
Alignment:
Q  315 atatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||| ||||||| || |||||||||||||||||  ||||||||||||||   |||| |||||||||    
T  44947191 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggag 44947260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 4960325 - 4960385
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||||||||||||||| ||||||| || | ||||| ||||||||| | |||||||||    
T  4960325 atattattcaagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgt 4960385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 384
Target Start/End: Original strand, 11538870 - 11538944
Alignment:
Q  310 tcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||| ||||||| || ||||||| ||| ||||| | ||||||| |||||   ||||||||||||||    
T  11538870 tcaagatatttaagctcaaaattatgcattggaatgtgtaatggagtcaactatgtcatgtattaagggacggag 11538944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 67269 - 67333
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||  |||||||| |||||    
T  67269 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactatgtca 67333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 17523977 - 17524025
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaat 351  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||||||    
T  17523977 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaat 17524025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 20671430 - 20671494
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||| |||||| |||||||| |||||||| | ||||||  |||||||||  ||||||||||||||    
T  20671430 atataattcaaaatatttaagctcaaaaccatgcattgacatgcgtaataaggtcaactgtgtca 20671494  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 335
Target Start/End: Original strand, 25009318 - 25009350
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacg 335  Q
    |||||||||||||||||||||||||||| ||||    
T  25009318 atattattcaagatatttaaactcaaaattacg 25009350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 25866243 - 25866303
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||||||||||||||| ||||||| || | ||||| ||| ||||| | |||||||||    
T  25866243 atattattcaagatatttaagctcaaaattatgaattggaatgtgtaatggagtcaactgt 25866303  T

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Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 6142401 - 6142320
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6142401 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 6142320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 16969553 - 16969634
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16969553 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 16969634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 995737 - 995818
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  995737 atattattcaagatatttaaactcaaaattactcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 995818  T

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Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 2397944 - 2398025
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2397944 atattattcaagatatttaaacttaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 2398025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 2667219 - 2667138
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  2667219 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcacttattaagggacggag 2667138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 17496222 - 17496141
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  17496222 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggatggag 17496141  T

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Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 2913071 - 2913152
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  2913071 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 2913152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 6188550 - 6188469
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  6188550 atattatttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaggaacggag 6188469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 29514921 - 29514840
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  29514921 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaattgtgtcacttattaagggacggag 29514840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 2141742 - 2141823
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||| |||||||    
T  2141742 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcatttattaagagacggag 2141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 24798439 - 24798359
Alignment:
Q  304 tattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||| ||||||    
T  24798439 tattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaaggaacggag 24798359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 9023014 - 9023095
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  9023014 atattattcaagatatttactctcaaaattacgcattggtatgcgtaattggatcaactgtgtcacttgttaagggacggag 9023095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 2656564 - 2656492
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaa 375  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  2656564 atattattcaagatatttaaacttaaaattacgcattggtatgcgtaatttggtcaactgtgtcacttattaa 2656492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 24825339 - 24825420
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||  ||||| ||||||||||||||    
T  24825339 atattattcaagatatttaaactcaaaattacacattgatatgcgtaattgagtcaactggatcacttattaagggacggag 24825420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 30699435 - 30699517
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcatt-ggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||| |||||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||| ||||||||| ||||    
T  30699435 atattattctagatatttaaactcaaaattacgcattgggtatacgtaatttggtcaactgtgtcacttattaagggatggag 30699517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 32541371 - 32541290
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||   ||||| ||||| ||||||||    
T  32541371 atattattcaagatatttaaactcaaaattacgcattaatatgcgtaattgggtcaactagatcacttattaaaggacggag 32541290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 35117450 - 35117531
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||| |||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||   |||||| |||||||    
T  35117450 atattatccaagatatttaagctcaaaattatgcattagtatgcgtaattgggtcaactgtgtcatgtattaagtgacggag 35117531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 33348030 - 33347950
Alignment:
Q  304 tattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||| |||||||||||||||||||| || |||||  ||||||||||||||||||||||||||   |||||| |||||||    
T  33348030 tattatccaagatatttaaactcaaaattatgcattaatatgcgtaattgggtcaactgtgtcatgtattaagtgacggag 33347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 10105985 - 10106049
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    ||||||||||||||||| || ||||||| || |||||| ||| ||||||  ||||||||||||||    
T  10105985 atattattcaagatattaaatctcaaaattatgcattgatatacgtaatatggtcaactgtgtca 10106049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 351
Target Start/End: Complemental strand, 4890020 - 4889972
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaat 351  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||||||    
T  4890020 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaat 4889972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 12677154 - 12677202
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaat 351  Q
    ||||||||||| |||||||||||||||| || |||||| |||| |||||    
T  12677154 atattattcaaaatatttaaactcaaaattatgcattgatatgtgtaat 12677202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 48380930 - 48381011
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48380930 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 48381011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 28914542 - 28914622
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28914542 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacgga 28914622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 39332719 - 39332640
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgg 382  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39332719 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacgg 39332640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 46608391 - 46608469
Alignment:
Q  306 ttattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46608391 ttattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 46608469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 3708427 - 3708508
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  3708427 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggttaactgtgtcacttattaagggacggag 3708508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 43447339 - 43447420
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  43447339 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggag 43447420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 55631764 - 55631686
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacg 381  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  55631764 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaagggacg 55631686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 8525305 - 8525224
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  8525305 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaaccgtgtcacttattcagggacggag 8525224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 10385022 - 10385103
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  10385022 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 10385103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 31152835 - 31152916
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31152835 atattattcaatatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 31152916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 40411497 - 40411416
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  40411497 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtatcacttattaagggacggag 40411416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 48652646 - 48652727
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  48652646 atattattcaagatatttaaactcaaaattacacattggtatccgtaattgggtcaactgtgtcacttattaagggacggag 48652727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 39171132 - 39171213
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  39171132 atattattcaagatatttaaactcaaaatcacgcattggtatgcgtaattaggtcaactgtatcacttattaagggacggag 39171213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 37667663 - 37667582
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||| ||||| ||| ||||    
T  37667663 atattattcaagatatttaaactcaaaattgcgcattggcatgcgtaattgggttaactgtgtcacttattaaaggatggag 37667582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 29821224 - 29821307
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggagag 386  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||   |||| |||||||||||    
T  29821224 atattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacggagag 29821307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 37164191 - 37164272
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||   |||| |||||||||    
T  37164191 atattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgtattatgggacggag 37164272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 43047561 - 43047638
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggac 380  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||   ||||| ||||||||||    
T  43047561 atattattcaagatatttaaactcaaaattacgcatgggtatgcgtaattggatcaactagatcacttattaagggac 43047638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 28988283 - 28988202
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | |||||||||||||   ||||||||||||||    
T  28988283 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggag 28988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 51306123 - 51306046
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggac 380  Q
    |||||||||||||||||||||||||||| || ||||||  ||||||||| | ||||||||||||| | ||||||||||    
T  51306123 atattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggac 51306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 1377982 - 1378063
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | |||||||||||||   ||||||||| ||||    
T  1377982 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggatggag 1378063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 6520609 - 6520690
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  || |||||||| ||||||| ||||| | ||||||||||||||    
T  6520609 atattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactttgtcatttattaagggacggag 6520690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 31657246 - 31657168
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacg 381  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||||| || ||||||||| ||| | |||||||||||    
T  31657246 atattattcaagatatttaagctcaaaattatgcattgaaatgcgtaaatgagtcaactgtatcatttattaagggacg 31657168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 23605791 - 23605710
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||| || ||||||| ||||||||| | |||||||||||||   ||||| ||||||||    
T  23605791 atattattcaagatatttaagttcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaaaggacggag 23605710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 28898960 - 28898879
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| |||| |||| | ||||||||| |||   ||||||||||||||    
T  28898960 atattattcaagatatttaagctcaaaattatgcattggaatgcataatggagtcaactgtatcatatattaagggacggag 28898879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 50685094 - 50685158
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    ||||||||||| ||||||||  |||||| ||  |||||||||||||||| |||||||||||||||    
T  50685094 atattattcaaaatatttaagttcaaaattatacattggtatgcgtaatagggtcaactgtgtca 50685158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 39260526 - 39260609
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggagag 386  Q
    ||||||||||||||||||||| |||||| || ||||||  |||||||||  | |||| |||||||   ||||||||||||||||    
T  39260526 atattattcaagatatttaaattcaaaattatgcattgacatgcgtaataagatcaattgtgtcaagtattaagggacggagag 39260609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 1981270 - 1981212
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaact 361  Q
    |||||||||||||||||||||||||||| || ||||||  ||||||||  |||||||||    
T  1981270 atattattcaagatatttaaactcaaaattatgcattgacatgcgtaagagggtcaact 1981212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 1613107 - 1613050
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaac 360  Q
    |||||||||||||||||||||||||||| || | ||||  ||||||||| ||||||||    
T  1613107 atattattcaagatatttaaactcaaaattatgtattgacatgcgtaatagggtcaac 1613050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 2806060 - 2805979
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||||||    
T  2806060 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggag 2805979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 4271903 - 4271822
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||| ||||||||||||||| ||||||  || ||||||| |||||||||  ||||||||||||||   |||| |||||||||    
T  4271903 atataattcaagatatttaagctcaaagttatgcattggcatgcgtaataaggtcaactgtgtcaagtattatgggacggag 4271822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 37381017 - 37381074
Alignment:
Q  327 aaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||| || ||||||||||||||||||||||||||||||   |||||||| |||||    
T  37381017 aaaactatgcgttggtatgcgtaattgggtcaactgtgtcatgtattaaggggcggag 37381074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 39376757 - 39376676
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| |||||||  | ||||||  ||||||||| | ||||||||| |||   ||||||||||||||    
T  39376757 atattattcaagatatttaagctcaaaatcatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacggag 39376676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 44210323 - 44210404
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  ||||||||| | |||||| || |||   ||||||||||||||    
T  44210323 atattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaaccgtatcatgtattaagggacggag 44210404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 24334267 - 24334203
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||| ||| ||||||| || ||||||  ||||||||| | |||||||||||||    
T  24334267 atattattcaagatatgtaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtca 24334203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 47834033 - 47833969
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||||||   |||||||||||||    
T  47834033 atattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaagtcaactgtgtca 47833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 11260876 - 11260957
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| | ||||| || ||||||  |||||||||  | |||| |||||||   ||||||||||||||    
T  11260876 atattattcaagatatttaagcacaaaattatgcattgacatgcgtaataagatcaattgtgtcaaatattaagggacggag 11260957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 17492841 - 17492922
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || |||||| |||| |||||  ||| ||||||||||   |||||| |||||||    
T  17492841 atattattcaagatatttaagctcaaagttatgcattgatatgtgtaataaggttaactgtgtcaagtattaagagacggag 17492922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 24505685 - 24505766
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || | ||||  |||||||||  |||||||| |||||   ||||||||||||||    
T  24505685 atattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacggag 24505766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 1615713 - 1615793
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||  ||| || |||||||   |||||||||||||    
T  1615713 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggttaattgtgtcaaatattaagggacgga 1615793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 37588419 - 37588355
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||| ||||||||||| ||||||| || ||||||| ||||| |||  | ||||||||||||    
T  37588419 atattattaaagatatttaagctcaaaattatgcattggcatgcgcaataagatcaactgtgtca 37588355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 41319813 - 41319732
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41319813 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 41319732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 10333467 - 10333386
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  10333467 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaatcgggtcaactgtgtcacttattaagggacggag 10333386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 31603306 - 31603225
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  31603306 atattattcaagatatttaaactcaaaattacgcattggtatgcctaattgggtcaactgtgtcacttattaagggacggag 31603225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 40471910 - 40471991
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  40471910 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagggacggag 40471991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 41437006 - 41437087
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  41437006 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcacttattaagggacggag 41437087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 42754244 - 42754163
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42754244 atattattcaagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 42754163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 4137583 - 4137657
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagg 377  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  4137583 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagg 4137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 5096422 - 5096503
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  5096422 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcacttattaagggacggag 5096503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 7724499 - 7724422
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggac 380  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7724499 atattattcaagatatttaaacccaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggac 7724422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 38963969 - 38964043
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagg 377  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||    
T  38963969 atattattcaagatatttaaactcaaaattacacattggtatgcgtaattgagtcaactgtgtcacttattaagg 38964043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 1749061 - 1748980
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||  |||||| ||||| ||||||||    
T  1749061 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactaggtcacttattaaaggacggag 1748980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 8373608 - 8373688
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    ||||||||||||||||||||||| |||| ||| ||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  8373608 atattattcaagatatttaaacttaaaattacacattgatatacgtaattgggtcaactgtgtcacttattaagggacgga 8373688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 11277708 - 11277789
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||   |||||||| ||||| ||||||||||||||    
T  11277708 atattattcaaaatatttaaactcaaaattacgcattggtatgcgtaatttcatcaactgtatcacttattaagggacggag 11277789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 20917816 - 20917735
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||  |||| | ||||||||||||||    
T  20917816 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactaggtcatttattaagggacggag 20917735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 20682816 - 20682897
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || ||||||  ||||||||| | ||||||||||||| | ||||||||||||||    
T  20682816 atattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggag 20682897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 37317050 - 37317131
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | |||||||||||||   ||||||||||||||    
T  37317050 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggag 37317131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 37987825 - 37987748
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggac 380  Q
    |||||||||||||||||||||||||||| ||| ||||  ||||||||||| | ||||||||| |||| ||||||||||    
T  37987825 atattattcaagatatttaaactcaaaattacacattaatatgcgtaattagatcaactgtgccacttattaagggac 37987748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 6729992 - 6729911
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | ||||| |||||||   ||||||||||||||    
T  6729992 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaagtgtgtcatgtattaagggacggag 6729911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 16333653 - 16333713
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    ||||||||||||||||||||  |||||| || |||||||||||||||||| ||||||||||    
T  16333653 atattattcaagatatttaaggtcaaaattatgcattggtatgcgtaattaggtcaactgt 16333713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 12209163 - 12209214
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgg 354  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  12209163 atattattcaagatatttaaactcaaaattatacattggtatgcgtaattgg 12209214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 11383934 - 11383870
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||||||||||| || || ||||||||  ||||  ||||||||||||||    
T  11383934 atattattcaagatatttaaactcaaaattatgcgttggtatggataataaggtcaactgtgtca 11383870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 16125972 - 16125912
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    ||||||||||||||||||||  |||||| || |||||| ||||||||||| ||||||||||    
T  16125972 atattattcaagatatttaaggtcaaaattatgcattgatatgcgtaattaggtcaactgt 16125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 45036537 - 45036597
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||| |||||||||||||| |||| || |||||||||| |||||| |||||||||||    
T  45036537 atattatttaagatatttaaacttaaaattatgcattggtatacgtaatagggtcaactgt 45036597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 2831882 - 2831965
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggagag 386  Q
    |||||||||||||||||||| ||||||| || |||||   |||||||||  ||||||||||||||   |||| |||||||||||    
T  2831882 atattattcaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaactgtgtcaagtattatgggacggagag 2831965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 7601286 - 7601205
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||   |||||||||||||   ||||||||||||||    
T  7601286 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagtattaagggacggag 7601205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 22718432 - 22718351
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || | ||||| ||||||||| | ||||||||| |||   |||||||| |||||    
T  22718432 atattattcaagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtatcatgtattaaggggcggag 22718351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 41575736 - 41575817
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||||||   ||||||||| |||   ||||||||||||||    
T  41575736 atattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatgcagtcaactgtatcatatattaagggacggag 41575817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 16646420 - 16646500
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    |||||||||||||||||||| || |||| || ||||||  ||||||||| | ||||||||| |||   |||||||||||||    
T  16646420 atattattcaagatatttaagcttaaaattatgcattgaaatgcgtaatggagtcaactgtatcatgtattaagggacgga 16646500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 26436576 - 26436518
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaact 361  Q
    |||||||||||||||||||||||||||  || ||||||  |||||||||  ||||||||    
T  26436576 atattattcaagatatttaaactcaaagttatgcattgacatgcgtaataaggtcaact 26436518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 16127670 - 16127589
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||| |||||||||||  || ||| || ||||||| |||||||||| |||||| |||||||   ||||||||| ||||    
T  16127670 atattatttaagatatttaaggtccaaattatgcattggcatgcgtaattaggtcaattgtgtcatgtattaagggagggag 16127589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 25627197 - 25627278
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||| ||||||| || ||||||  |||| ||||  |||||||| |||||   ||||||||||||||    
T  25627197 atattattcaatatatttaagctcaaaattatgcattgtcatgcataataaggtcaactatgtcaagtattaagggacggag 25627278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 44022442 - 44022506
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    ||||||||||| ||||||||  |||||| || ||||||  |||||||||  ||||||||||||||    
T  44022442 atattattcaatatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtgtca 44022506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 45299493 - 45299574
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45299493 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 45299574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 5606285 - 5606204
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5606285 atattattcaagatatttaaactcaaaattaagcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 5606204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 7075224 - 7075143
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  7075224 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacggag 7075143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 44741517 - 44741598
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  44741517 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactgtgtcacttattaagggacggag 44741598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 2138923 - 2138842
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  2138923 atattattcaagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgttacttattaaaggacggag 2138842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 8250737 - 8250656
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  8250737 atattattcaagatatttaaactcaaaattatgcattggtatacgtaattaggtcaactgtgtcacttattaagggacggag 8250656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 10100407 - 10100326
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  10100407 atattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattaggtcaactgtgtcacttattaagggacggag 10100326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 10124283 - 10124364
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  10124283 atattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattgagtcaactgtgtcacttattaagggacggag 10124364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 26544042 - 26544123
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||| ||||||||    
T  26544042 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaatcgggtcaactgtgtcacttattaaaggacggag 26544123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 52749455 - 52749536
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  |||||| ||||||||||||||    
T  52749455 atattattcaagatatttaaactcaaaattacgcattggtatgtgtaattgggtcaactaggtcacttattaagggacggag 52749536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 36035860 - 36035941
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  36035860 atattattcaagatatttaaacttaaaattacacattggtatgcgtaattgggtcaactaggtcacttattaagggacggag 36035941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 384
Target Start/End: Complemental strand, 6017344 - 6017262
Alignment:
Q  302 aatattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| | ||| |||||| |||||||    
T  6017344 aatattattcaagatatttaaactcaaaattacgcattggtatgcgtaatttgatcaactgtatgacttattaagagacggag 6017262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 5945939 - 5946020
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   ||||| |||||| |||||||    
T  5945939 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactagatcacttattaagagacggag 5946020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 23393406 - 23393487
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||||| ||||||||||||| | ||||||||||||||    
T  23393406 atattattcaagatatttaagctcaaaattatgcattggcatgcgtaattgagtcaactgtgtcatttattaagggacggag 23393487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 31651795 - 31651714
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||| | |||| |||||||||    
T  31651795 atattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatttattatgggacggag 31651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 1821523 - 1821459
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||||||||||    
T  1821523 atattattcaagatatttaagctcaaaattatgcattggtatacgtaattgggtcaactgtgtca 1821459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 8048642 - 8048561
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | |||||||||||||   ||||||||||||||    
T  8048642 atattattcaagatatttaagctcaaaaatatgcattggaatgcgtaatggagtcaactgtgtcatgtattaagggacggag 8048561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 43453059 - 43452995
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||||  ||||||||||||||    
T  43453059 atattattcaagatatttaaactcaaaattatgcattgatatgcgtaataaggtcaactgtgtca 43452995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 44240693 - 44240774
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||| ||||||| || ||||||  ||||||||||| ||| ||||||||| | ||||||||||||||    
T  44240693 atattattcaatatatttaagctcaaaattatgcattgaaatgcgtaattgagtccactgtgtcatttattaagggacggag 44240774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 28490334 - 28490397
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtc 366  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | ||||||||||||    
T  28490334 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtc 28490397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 26476903 - 26476822
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || | ||||  |||||||||  ||||||||||||||   ||||||| ||||||    
T  26476903 atattattcaagatatttaaactcaaaattatgtattgacatgcgtaataaggtcaactgtgtcaagtattaaggaacggag 26476822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 38786840 - 38786759
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||| ||||||||||||||||||| || | |||| |||||||||| ||||||| |||||||   |||| |||||||||    
T  38786840 atattattaaagatatttaaactcaaaattatgtattgatatgcgtaatagggtcaattgtgtcatgtattatgggacggag 38786759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 41855615 - 41855535
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||| || ||||||  ||||||||| | ||||||||||||| | ||||||||||||||    
T  41855615 atattattcaagatatttaag-tcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggag 41855535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 23337980 - 23338040
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||||  ||||||||||    
T  23337980 atattattcaagatatttaaactcaaaattatgcattgacatgcgtaatatggtcaactgt 23338040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 41414377 - 41414441
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||| || ||||||  || |||||||| |||||||||||||    
T  41414377 atattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactgtgtca 41414441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 52141947 - 52141883
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||| ||||||||| || ||||||| |||| ||||  ||||||||||||||    
T  52141947 atattattcaagatatttcaactcaaaaatatgcattggcatgcataataaggtcaactgtgtca 52141883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 4489235 - 4489293
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaact 361  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||| | |||||||    
T  4489235 atattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaact 4489293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 5117328 - 5117247
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||  | ||||||||||||   ||||||||||||||    
T  5117328 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataagttcaactgtgtcaagtattaagggacggag 5117247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 31932073 - 31931992
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || | ||||| ||||||||| |  ||||||||||||   ||||||| ||||||    
T  31932073 atattattcaagatatttaagctcaaaattatgtattggcatgcgtaatagaatcaactgtgtcatgtattaaggaacggag 31931992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 48389241 - 48389322
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || | || |  ||||||||| | ||||||||||||| | ||||| ||||||||    
T  48389241 atattattcaagatatttaagctcaaaattatgtatcgaaatgcgtaatggagtcaactgtgtcatttattaaaggacggag 48389322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 50014455 - 50014374
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||||||| || || ||||||| ||  ||||| | |||| ||||||||   ||||||||||||||    
T  50014455 atattattcaagatatttaaactcagaattatgcattggaatatgtaatggagtcacctgtgtcatgtattaagggacggag 50014374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 12685821 - 12685759
Alignment:
Q  305 attattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||| ||||||| || ||||||  ||| |||||  ||||||||||||||    
T  12685821 attattcaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtgtca 12685759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 44963566 - 44963485
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || | ||||  |||||||||  |||||||| |||||   ||||||||||||||    
T  44963566 atattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagtattaagggacggag 44963485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 383
Target Start/End: Original strand, 25815706 - 25815782
Alignment:
Q  307 tattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    |||||||||||||||| ||||||| || ||||||  || ||||||  | ||||||||||||   |||||||||||||    
T  25815706 tattcaagatatttaacctcaaaattatgcattgagatacgtaataagatcaactgtgtcaactattaagggacgga 25815782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 40058861 - 40058797
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||  ||||||||||||||  || ||||||  |||||||||  ||||||||||||||    
T  40058861 atattattcaaagtatttaaactcaaagttatgcattgacatgcgtaataaggtcaactgtgtca 40058797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 40883584 - 40883644
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    ||||||||||||||||||||  |||||| || |||||  |||||||||| || ||||||||    
T  40883584 atattattcaagatatttaagttcaaaattatgcattaatatgcgtaataggatcaactgt 40883644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 36820050 - 36820131
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36820050 atattattcatgatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 36820131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 32345673 - 32345593
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  32345673 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactgtgtcacttattaagggacgga 32345593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 35693720 - 35693642
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacg 381  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  35693720 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacg 35693642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 16807036 - 16806955
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  16807036 atattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcacttattaagtgacggag 16806955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 27621185 - 27621104
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| || ||||||||||||||    
T  27621185 atattattcaagatatttaaactcaaaattacgcattagtatgcgtaattggatcaactgtgtcgcttattaagggacggag 27621104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 38069225 - 38069302
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggac 380  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  38069225 atattatttaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggac 38069302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 386
Target Start/End: Complemental strand, 25273907 - 25273824
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggagag 386  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||| ||||||||| ||||||    
T  25273907 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattggatcaattgtgtcacttattaagggatggagag 25273824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 35265715 - 35265643
Alignment:
Q  311 caagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    ||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  35265715 caagatatttaaattcaaaattacgcattagtatgcgtaattggatcaactgtgtcacttattaagggacgga 35265643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 40232414 - 40232482
Alignment:
Q  316 tatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  40232414 tatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaagggacggag 40232482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 30462111 - 30462035
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaaggga 379  Q
    ||||||||||||||||||||||| |||| ||||||||||||| | ||||||| |||||||| ||||| |||||||||    
T  30462111 atattattcaagatatttaaacttaaaattacgcattggtatacataattggatcaactgtatcacttattaaggga 30462035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 48448692 - 48448773
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||| ||||| |||||||||||||||||||||   ||||||||| ||||    
T  48448692 atattattcaagatatttaagctcaaaattatgcattagtatgtgtaattgggtcaactgtgtcatgtattaagggatggag 48448773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 26651137 - 26651057
Alignment:
Q  304 tattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||| ||||||| || |  |||||||||||||| ||||||||||||||| | |||| |||||||||    
T  26651137 tattattcaagatatttaagctcaaaattatgttttggtatgcgtaatagggtcaactgtgtcatttattatgggacggag 26651057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 32972225 - 32972144
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||| | ||||||||| |  |||||||||||| | ||||||||||||||    
T  32972225 atattattcaagatatttaagctcaaaattatgcattagaatgcgtaatggaatcaactgtgtcatttattaagggacggag 32972144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 9173226 - 9173163
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtc 366  Q
    ||||||||||||||||||||  |||||| || ||||||  ||||||||| ||||||||||||||    
T  9173226 atattattcaagatatttaagttcaaaattatgcattgacatgcgtaatagggtcaactgtgtc 9173163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 18756763 - 18756843
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| ||| |||||||||||| || |||||| ||||||||| | ||||||||||||||   |||| |||||||||    
T  18756763 atattattcaaaatagttaaactcaaaattatgcattgatatgcgtaa-taggtcaactgtgtcatgtattatgggacggag 18756843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 41007847 - 41007766
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||  |||||  || ||||||  ||||||||||||||   |||| |||||||||    
T  41007847 atattattcaagatatttaaactcaaaattatacattgacatacgtaataaggtcaactgtgtcaagtattatgggacggag 41007766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 3124036 - 3123972
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||  ||||||||||||||    
T  3124036 atattattcaagatatttaagctcaaagatatgcattgacatgcgtaataaggtcaactgtgtca 3123972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 5842292 - 5842356
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||||||| || ||||||  || ||||||  ||||||||||||||    
T  5842292 atattattcaagatatttaagctcaaaattatgcattgacattcgtaatatggtcaactgtgtca 5842356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 19817509 - 19817573
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    ||||||||||||||||||||||| |||| || ||||| | |||||||||  |||||||| |||||    
T  19817509 atattattcaagatatttaaacttaaaattatgcattagcatgcgtaataaggtcaactatgtca 19817573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 28016585 - 28016648
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||| ||| ||| || ||||||||||||||||| | || ||||||||||    
T  28016585 atattattcaagatatttaagctc-aaattatgcattggtatgcgtaatagagttaactgtgtca 28016648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 25571582 - 25571504
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacg 381  Q
    |||||||||||||||||||| || |||| || | ||||  || |||||| ||||||||||||||||  |||| ||||||    
T  25571582 atattattcaagatatttaagcttaaaattatgtattgacattcgtaatagggtcaactgtgtcacgtattatgggacg 25571504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 4620238 - 4620274
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcatt 339  Q
    |||||||||||||||||||||||||||| || |||||    
T  4620238 atattattcaagatatttaaactcaaaattatgcatt 4620274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 19327489 - 19327553
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    ||||||||||||||||||||  |||||| || ||||||| || | |||| | |||||||||||||    
T  19327489 atattattcaagatatttaagttcaaaattatgcattggaatacataatggagtcaactgtgtca 19327553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 9936778 - 9936697
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  9936778 atattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcacttattaagggacggag 9936697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 14607448 - 14607367
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  14607448 atattattcaagatatttaaactcaaaattacgcattagtatgcgtaattgggtcaactgtgtcacttattaagggacggag 14607367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 20023034 - 20023115
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  20023034 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattgagggacggag 20023115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 20040305 - 20040224
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20040305 atattattcaagatatttaaattcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 20040224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 30721575 - 30721494
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30721575 atattattcaagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacggag 30721494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 14633181 - 14633264
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggagag 386  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||    
T  14633181 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcacttattaaggggcggagag 14633264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 31191065 - 31190986
Alignment:
Q  305 attattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  31191065 attattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaagggacggag 31190986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 1781035 - 1780954
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  1781035 atattactcaagatatttaaactcaaaattacgcattggtatgagtaattgggtcaactgtgtcacttattaagggacggag 1780954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 1831524 - 1831605
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  1831524 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaaggaaggag 1831605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 14057882 - 14057963
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  14057882 atattattcaagatatttaaactcaaaattacgcattggtatgcataattgggtcaattgtgtcacttattaagggacggag 14057963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 40316991 - 40317072
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  40316991 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaaaggaaggag 40317072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 1098349 - 1098430
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||  |||||||||||||    
T  1098349 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcacttgttaagggacggag 1098430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 19344589 - 19344508
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  19344589 atattattcaaaatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttattaagagacggag 19344508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 41263019 - 41262938
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  41263019 atattattcaagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaattgtgtcacttattaagagacggag 41262938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 41410550 - 41410469
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||    
T  41410550 atattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcacttattaaaggaaggag 41410469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 13548387 - 13548464
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggac 380  Q
    |||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||| ||||||||| ||||||||||    
T  13548387 atattattcaagatatttaaactcaaaattacgtattgatatgcgtaattgagtcaattgtgtcacttattaagggac 13548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 30351961 - 30351881
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||  |||||| |||||||||||||    
T  30351961 atattgttcaagatatttaaactcaaaattacgcattggtatacgtaatttggtcaactaggtcacttattaagggacgga 30351881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 369
Target Start/End: Complemental strand, 30211631 - 30211565
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcact 369  Q
    |||||||||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||    
T  30211631 atattattcaagatatttaaactcaaaattacgcattggtattcctaattggatcaactgtgtcact 30211565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 33402481 - 33402417
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||||||    
T  33402481 atattattcaagatatttaaactcaaaattacacattgatatgcgtaattgggtctactgtgtca 33402417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 27675714 - 27675795
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||| ||||||||||| ||||||| || ||||||  ||||||||| | ||||||||||||| | ||||||||||||||    
T  27675714 atattatttaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatttattaagggacggag 27675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 40080155 - 40080236
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| ||  |||||| ||||||||| | ||||||||||||| | ||||||||| ||||    
T  40080155 atattattcaagatatttaagctcaaaattatacattggaatgcgtaatagagtcaactgtgtcatttattaagggatggag 40080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 14140092 - 14140140
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaat 351  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||    
T  14140092 atattattcaagatatttaaactcaaaattatgcattggaatgcgtaat 14140140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 10465185 - 10465104
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||| || ||||||  |||| |||| | |||||||||||||   ||||||||| ||||    
T  10465185 atattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcatgtattaagggatggag 10465104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 26801991 - 26801910
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||||||    
T  26801991 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggag 26801910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 26809541 - 26809460
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||||||    
T  26809541 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggag 26809460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 26824568 - 26824487
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||||||    
T  26824568 atattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggacggag 26824487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 34170003 - 34170084
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||| ||| |||||||| ||||||| ||  |||| | ||||||||||| |||||||||||||   ||||||||||||||    
T  34170003 atattatccaaaatatttaagctcaaaattatacattagaatgcgtaattgagtcaactgtgtcatgtattaagggacggag 34170084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 967369 - 967429
Alignment:
Q  304 tattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtg 364  Q
    |||||||||||||||||||  |||||| || |||||||||||||||||   ||||||||||    
T  967369 tattattcaagatatttaagttcaaaattatgcattggtatgcgtaataaagtcaactgtg 967429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 39925378 - 39925442
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||||||||||||| || ||||||  || |||||| |||| |||| |||||    
T  39925378 atattattcaagatatttaaactcaaaattatgcattgacatacgtaatagggttaactttgtca 39925442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 27674393 - 27674468
Alignment:
Q  305 attattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggac 380  Q
    |||||||||||||||||| ||||||  || ||||||  |||||||||  ||||||||||||||   ||||||||||    
T  27674393 attattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtattaagggac 27674468  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 39104169 - 39104111
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaact 361  Q
    ||||||||||| |||||||| ||||||| || ||||||| |||||||||  ||||||||    
T  39104169 atattattcaatatatttaagctcaaaattatgcattggcatgcgtaataaggtcaact 39104111  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 1831238 - 1831319
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||   |||||||| ||||   ||||||||||||||    
T  1831238 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggag 1831319  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 2551517 - 2551480
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattg 340  Q
    |||||||||||||||||||||||||||| || ||||||    
T  2551517 atattattcaagatatttaaactcaaaattatgcattg 2551480  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 40316705 - 40316786
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||   |||||||| ||||   ||||||||||||||    
T  40316705 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggag 40316786  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 41410836 - 41410755
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  || ||||||  |||||||||   |||||||| ||||   ||||||||||||||    
T  41410836 atattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagtattaagggacggag 41410755  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 1918720 - 1918660
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    ||||||||||||||||||||  |||||| || ||||||| ||| |||||  ||||||||||    
T  1918720 atattattcaagatatttaaggtcaaaattatgcattggcatgtgtaataaggtcaactgt 1918660  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 6734956 - 6735016
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||||||||||||||| ||||||| ||  ||||| | | |||||| |||||||||||    
T  6734956 atattattcaagatatttaagctcaaaattatacattgatgtacgtaatagggtcaactgt 6735016  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 30788379 - 30788439
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||| ||  ||||||||||    
T  30788379 atattattcaagatatttaagctcaaaattatgcattgacatgcgttataaggtcaactgt 30788439  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 41042727 - 41042647
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacgga 383  Q
    ||||||||||| |||||||| ||||||| || ||||||  || |||||| | |||| ||||||||   |||||||||||||    
T  41042727 atattattcaatatatttaagctcaaaattatgcattgaaatacgtaatggagtcagctgtgtcatgtattaagggacgga 41042647  T

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Target: scaffold0001 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 184140 - 184221
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  184140 atattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcacttattaaaggacggag 184221  T

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Target: scaffold0195 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 135 - 54
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||||||||||||||| ||||||  ||  |||||| |||||||||  ||||||||||||||   ||||||||||||||    
T  135 atattattcaagatatttaatctcaaagttatacattggcatgcgtaataaggtcaactgtgtcaagtattaagggacggag 54  T

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Target: scaffold0500 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 565 - 503
Alignment:
Q  305 attattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtca 367  Q
    |||||||||||||||||| ||||||| || ||||||  || |||||| |||||||||||||||    
T  565 attattcaagatatttaagctcaaaattatgcattgacatacgtaatagggtcaactgtgtca 503  T

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Target: scaffold0172 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 385
Target Start/End: Complemental strand, 19625 - 19543
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggaga 385  Q
    |||||||||||||||||||| ||||||| || ||||||  || ||||||  ||||||||||||||   ||||| |||||||||    
T  19625 atattattcaagatatttaagctcaaaattatgcattgacattcgtaataaggtcaactgtgtcaagtattaatggacggaga 19543  T

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Target: scaffold0283 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 3169 - 3238
Alignment:
Q  315 atatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    |||||||| ||||||| || |||||||||||||||||  ||||||||||||||   |||| |||||||||    
T  3169 atatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggag 3238  T

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Target: scaffold0281 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 13279 - 13360
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgtgtcactcattaagggacggag 384  Q
    ||||||||||||||||||||  |||||| || | ||||| ||||||||| | || ||||||||||   ||||||||||||||    
T  13279 atattattcaagatatttaaggtcaaaattatgtattggaatgcgtaatggagttaactgtgtcatatattaagggacggag 13360  T

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Target: scaffold0289 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 9297 - 9357
Alignment:
Q  303 atattattcaagatatttaaactcaaaactacgcattggtatgcgtaattgggtcaactgt 363  Q
    ||||||||||||||||||||||| ||| |||  ||||| ||||||||||  ||||||||||    
T  9297 atattattcaagatatttaaactaaaagctatacattgatatgcgtaataaggtcaactgt 9357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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