View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11309A_low_24 (Length: 437)

Name: NF11309A_low_24
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11309A_low_24
NF11309A_low_24
[»] scaffold0896 (1 HSPs)
scaffold0896 (163-431)||(877-1148)
[»] chr6 (19 HSPs)
chr6 (163-431)||(8657062-8657333)
chr6 (165-318)||(33289070-33289223)
chr6 (165-220)||(24570754-24570809)
chr6 (174-230)||(3593057-3593113)
chr6 (163-230)||(13533931-13533998)
chr6 (174-224)||(8539723-8539773)
chr6 (174-275)||(162678-162779)
chr6 (165-230)||(1405563-1405628)
chr6 (174-230)||(2266940-2266996)
chr6 (174-230)||(10584737-10584793)
chr6 (174-230)||(12597274-12597330)
chr6 (174-230)||(19997829-19997885)
chr6 (174-230)||(33646106-33646162)
chr6 (174-225)||(15044891-15044942)
chr6 (174-230)||(28099606-28099662)
chr6 (176-275)||(6300720-6300819)
chr6 (176-275)||(6307530-6307629)
chr6 (174-224)||(17202602-17202652)
chr6 (174-230)||(2005592-2005648)
[»] chr4 (30 HSPs)
chr4 (158-431)||(19745018-19745294)
chr4 (158-431)||(19794512-19794788)
chr4 (157-431)||(23976698-23976975)
chr4 (165-230)||(44376079-44376144)
chr4 (350-427)||(45117179-45117256)
chr4 (174-230)||(16904961-16905017)
chr4 (174-230)||(37590813-37590869)
chr4 (174-230)||(46256198-46256254)
chr4 (174-275)||(18209630-18209731)
chr4 (174-230)||(12090468-12090524)
chr4 (174-230)||(30824931-30824987)
chr4 (174-230)||(33139480-33139536)
chr4 (174-230)||(37651830-37651886)
chr4 (174-230)||(47142809-47142865)
chr4 (174-230)||(52434788-52434844)
chr4 (165-206)||(11238181-11238222)
chr4 (165-230)||(39058357-39058422)
chr4 (164-204)||(9199865-9199905)
chr4 (164-204)||(9201404-9201444)
chr4 (174-230)||(16917897-16917953)
chr4 (174-209)||(31965978-31966013)
chr4 (185-231)||(35903632-35903678)
chr4 (176-230)||(53143273-53143327)
chr4 (165-202)||(17558825-17558862)
chr4 (165-202)||(32225583-32225620)
chr4 (160-209)||(48118529-48118578)
chr4 (176-232)||(22289966-22290022)
chr4 (165-209)||(35760766-35760810)
chr4 (176-232)||(37340614-37340669)
chr4 (174-230)||(41387290-41387346)
[»] chr8 (26 HSPs)
chr8 (165-431)||(405354-405623)
chr8 (163-431)||(17695393-17695664)
chr8 (269-431)||(44831791-44831956)
chr8 (165-277)||(44831134-44831246)
chr8 (202-330)||(1848914-1849044)
chr8 (174-230)||(39997855-39997911)
chr8 (155-230)||(6299010-6299085)
chr8 (174-223)||(23353631-23353680)
chr8 (165-230)||(28583019-28583084)
chr8 (174-230)||(995824-995880)
chr8 (174-230)||(10478101-10478157)
chr8 (174-230)||(11142631-11142687)
chr8 (174-230)||(11725354-11725410)
chr8 (174-230)||(15961296-15961352)
chr8 (174-230)||(18175545-18175601)
chr8 (174-230)||(18997864-18997920)
chr8 (174-230)||(30473893-30473949)
chr8 (174-230)||(32110870-32110926)
chr8 (174-225)||(18842073-18842124)
chr8 (174-225)||(44837078-44837129)
chr8 (174-230)||(35122331-35122387)
chr8 (174-230)||(44832195-44832251)
chr8 (174-225)||(18569034-18569085)
chr8 (165-202)||(16367879-16367916)
chr8 (177-230)||(24409040-24409093)
chr8 (165-202)||(42308123-42308160)
[»] chr1 (21 HSPs)
chr1 (165-431)||(28947454-28947723)
chr1 (165-430)||(29387887-29388155)
chr1 (174-230)||(1231960-1232016)
chr1 (174-230)||(35614231-35614287)
chr1 (174-230)||(38444795-38444851)
chr1 (174-236)||(52957034-52957096)
chr1 (75-136)||(4241031-4241091)
chr1 (174-230)||(4266545-4266601)
chr1 (174-230)||(18706518-18706574)
chr1 (174-230)||(29942182-29942238)
chr1 (174-230)||(31018209-31018265)
chr1 (174-230)||(34888695-34888751)
chr1 (174-230)||(38913756-38913812)
chr1 (174-230)||(50326165-50326221)
chr1 (174-224)||(18855242-18855292)
chr1 (174-224)||(23482716-23482766)
chr1 (180-225)||(14009850-14009895)
chr1 (174-210)||(2951375-2951411)
chr1 (174-230)||(9216195-9216251)
chr1 (174-230)||(52687123-52687179)
chr1 (165-202)||(51387129-51387166)
[»] chr5 (20 HSPs)
chr5 (165-431)||(30096276-30096545)
chr5 (165-431)||(30088702-30088957)
chr5 (286-431)||(30089193-30089341)
chr5 (163-230)||(25099234-25099301)
chr5 (163-230)||(25158324-25158391)
chr5 (174-275)||(8179762-8179864)
chr5 (174-230)||(20655058-20655114)
chr5 (174-230)||(33375928-33375984)
chr5 (174-230)||(2398951-2399007)
chr5 (174-230)||(10729451-10729507)
chr5 (174-230)||(16526315-16526371)
chr5 (174-230)||(20874852-20874908)
chr5 (174-230)||(34107347-34107403)
chr5 (174-230)||(34110816-34110872)
chr5 (174-230)||(38246874-38246930)
chr5 (174-230)||(40177205-40177261)
chr5 (165-202)||(4082591-4082628)
chr5 (165-202)||(16349715-16349752)
chr5 (174-230)||(1396153-1396209)
chr5 (165-202)||(40951487-40951524)
[»] chr3 (27 HSPs)
chr3 (167-431)||(37099504-37099771)
chr3 (32-146)||(19923990-19924105)
chr3 (286-431)||(37099121-37099268)
chr3 (32-146)||(19939977-19940091)
chr3 (174-230)||(4584443-4584499)
chr3 (174-230)||(6460177-6460233)
chr3 (174-230)||(26948962-26949018)
chr3 (174-230)||(36076463-36076519)
chr3 (174-230)||(1941729-1941785)
chr3 (174-230)||(3898586-3898642)
chr3 (174-230)||(12264364-12264420)
chr3 (174-230)||(34121519-34121575)
chr3 (174-230)||(38653936-38653992)
chr3 (174-230)||(43363620-43363676)
chr3 (174-230)||(49672726-49672782)
chr3 (174-230)||(55041592-55041648)
chr3 (165-206)||(5561553-5561594)
chr3 (174-230)||(20671413-20671469)
chr3 (174-230)||(21098468-21098524)
chr3 (174-230)||(31488575-31488631)
chr3 (174-230)||(49506358-49506414)
chr3 (174-209)||(40014662-40014697)
chr3 (164-202)||(44708226-44708264)
chr3 (167-205)||(53556913-53556951)
chr3 (176-232)||(5189798-5189854)
chr3 (185-225)||(39146609-39146649)
chr3 (165-205)||(44751632-44751672)
[»] scaffold0051 (1 HSPs)
scaffold0051 (194-431)||(10253-10493)
[»] chr7 (26 HSPs)
chr7 (165-330)||(31097776-31097941)
chr7 (165-329)||(32660934-32661098)
chr7 (268-330)||(31097607-31097669)
chr7 (165-288)||(21651484-21651607)
chr7 (187-288)||(21681015-21681116)
chr7 (174-230)||(13786334-13786390)
chr7 (174-230)||(16376554-16376610)
chr7 (174-230)||(17178246-17178302)
chr7 (180-283)||(21713585-21713688)
chr7 (174-230)||(21670145-21670201)
chr7 (174-230)||(21804581-21804637)
chr7 (174-230)||(27903426-27903482)
chr7 (174-230)||(33916956-33917012)
chr7 (174-230)||(38163348-38163404)
chr7 (174-222)||(40969063-40969111)
chr7 (174-230)||(42242163-42242219)
chr7 (179-230)||(24924243-24924294)
chr7 (174-225)||(43933553-43933604)
chr7 (174-230)||(3840650-3840706)
chr7 (174-230)||(31373620-31373676)
chr7 (163-206)||(7853687-7853730)
chr7 (174-209)||(21342008-21342043)
chr7 (165-206)||(44579787-44579828)
chr7 (174-230)||(27138537-27138593)
chr7 (345-373)||(31097561-31097589)
chr7 (345-373)||(31097730-31097758)
[»] chr2 (16 HSPs)
chr2 (163-330)||(31572345-31572512)
chr2 (174-230)||(8700425-8700481)
chr2 (174-230)||(19596372-19596428)
chr2 (174-230)||(41663401-41663457)
chr2 (174-230)||(6120716-6120772)
chr2 (174-230)||(18351715-18351771)
chr2 (174-230)||(27944805-27944861)
chr2 (174-230)||(31424173-31424229)
chr2 (174-230)||(41664674-41664730)
chr2 (174-230)||(44902245-44902301)
chr2 (174-230)||(20544989-20545045)
chr2 (174-230)||(42442128-42442184)
chr2 (164-202)||(22136278-22136316)
chr2 (193-230)||(692230-692267)
chr2 (176-204)||(2988911-2988939)
chr2 (345-373)||(31572299-31572327)
[»] scaffold0007 (1 HSPs)
scaffold0007 (198-288)||(79105-79195)
[»] scaffold0515 (1 HSPs)
scaffold0515 (165-225)||(6061-6121)
[»] scaffold0306 (1 HSPs)
scaffold0306 (165-225)||(6071-6131)
[»] scaffold0031 (1 HSPs)
scaffold0031 (174-230)||(46438-46494)
[»] scaffold0173 (1 HSPs)
scaffold0173 (174-230)||(19511-19567)
[»] scaffold0022 (1 HSPs)
scaffold0022 (174-230)||(149059-149115)
[»] scaffold0836 (1 HSPs)
scaffold0836 (174-230)||(5287-5343)


Alignment Details
Target: scaffold0896 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 163 - 431
Target Start/End: Complemental strand, 1148 - 877
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataatttta 262  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1148 ttactagatcgtccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacaatcccaacttataatttta 1049  T
Q  263 atgtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacataattttaaaatat---ttttaataacagaaga 359  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||      | ||| |    |||||||| ||||||    
T  1048 atgtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcaacaatctataatttaataatagaaga 949  T
Q  360 gattttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  948 gattttgccaaaagcactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 163 - 431
Target Start/End: Original strand, 8657062 - 8657333
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataatttta 262  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8657062 ttactagatcgtccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacaatcccaacttataatttta 8657161  T
Q  263 atgtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacataattttaaaatat---ttttaataacagaaga 359  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||      | ||| |    |||||||| ||||||    
T  8657162 atgtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcaacaatctataatttaataatagaaga 8657261  T
Q  360 gattttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8657262 gattttgccaaaagcactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 8657333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 33289070 - 33289223
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  33289070 actagatcgtccacccgtgctgccgcacgggtcatatagattgtaagtgtggtagacaaaagcaacatttgataatatagtcccaacttataattttaat 33289169  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatat 318  Q
    |||| |||| |||||||||||||||||| || ||||||||| ||||||||||||    
T  33289170 gtcaaaattataaatacaactatagaagaaatttgtataattgattcaaaatat 33289223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 24570754 - 24570809
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtaga 220  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  24570754 actagatcgtccacccgtgctgccacacgggtcatatacattgtaagtgtagtaga 24570809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 3593113 - 3593057
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  3593113 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 3593057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 13533998 - 13533931
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||  ||||||||| |||| ||||    
T  13533998 ttactagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaa 13533931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 8539773 - 8539723
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaa 224  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  8539773 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaa 8539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 275
Target Start/End: Original strand, 162678 - 162779
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataatt 273  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||   |||||||||||  ||| | || |   ||||||||||||||||||||| |||    
T  162678 tccacccgtgctgccgcacgggtcatatacattcaaaatgtagtaggtcaaagcaaaattcaatagttcaattataacttataattttaatgtcattatt 162777  T
Q  274 tt 275  Q
    ||    
T  162778 tt 162779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 1405563 - 1405628
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||  |||||||||||||||||| |||||||||||||||||  ||||||||| |||| ||||    
T  1405563 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaa 1405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 2266996 - 2266940
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  2266996 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 2266940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 10584737 - 10584793
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||  |||||||||||||||||||  |||||||||||||| ||||    
T  10584737 tccacccgtgctgccatatgggtcatatacattgtagatgtagtagacaaaaacaaa 10584793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 12597274 - 12597330
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  12597274 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 12597330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 19997885 - 19997829
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  19997885 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 19997829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 33646162 - 33646106
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  33646162 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 33646106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 15044942 - 15044891
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    ||||||||||||||||||  ||||||||||||||||  ||||||||||||||    
T  15044942 tccacccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaa 15044891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 28099606 - 28099662
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | || ||||||||| ||||    
T  28099606 tccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaa 28099662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 6300720 - 6300819
Alignment:
Q  176 cacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataatttt 275  Q
    |||||||||||||||| |||||||||||||||||  | |||||| ||||| |||| ||| |||   || |  ||| ||||| |||||||||||| |||||    
T  6300720 cacccgtgctgccgcacgggtcatatacattgtatatctagtaggcaaaaacaaagtttaatagctcaattacaatttatagttttaatgtcattatttt 6300819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 6307530 - 6307629
Alignment:
Q  176 cacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataatttt 275  Q
    |||||||||||||||| |||||||||||||||||  | |||||| ||||| |||| ||| |||   || |  ||| ||||| |||||||||||| |||||    
T  6307530 cacccgtgctgccgcacgggtcatatacattgtatatctagtaggcaaaaacaaagtttaatagctcaattacaatttatagttttaatgtcattatttt 6307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 17202652 - 17202602
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaa 224  Q
    ||||||||||||||||||   |||||||||||||||  |||||||||||||    
T  17202652 tccacccgtgctgccgcacaagtcatatacattgtagatgtagtagacaaa 17202602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 2005648 - 2005592
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||| ||||| |||||| |||||||||||||||||  || ||||||||||| ||||    
T  2005648 tccactcgtgcggccgcacgggtcatatacattgtagatgcagtagacaaaaacaaa 2005592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 158 - 431
Target Start/End: Complemental strand, 19745294 - 19745018
Alignment:
Q  158 aatatttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataa 257  Q
    |||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  19745294 aatagttactagatcgtccacccgtgcggccgcacgggtcatatacattgtaagtgtagtagacaaaggcaacattttataatacagtcccaacttataa 19745195  T
Q  258 ttttaatgtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataaca 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  ||||||||||    
T  19745194 ttttaatgtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataaca 19745095  T
Q  355 gaagagattttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19745094 gaagagattttgccaaaagcactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 19745018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 158 - 431
Target Start/End: Original strand, 19794512 - 19794788
Alignment:
Q  158 aatatttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataa 257  Q
    |||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  19794512 aatagttactagatcgtccacccgtgcggccgcacgggtcatatacattgtaagtgtagtagacaaaggcaacattttataatacagtcccaacttataa 19794611  T
Q  258 ttttaatgtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataaca 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  ||||||||||    
T  19794612 ttttaatgtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataaca 19794711  T
Q  355 gaagagattttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19794712 gaagagattttgccaaaagcactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 19794788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 157 - 431
Target Start/End: Original strand, 23976698 - 23976975
Alignment:
Q  157 aaatatttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttata 256  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  23976698 aaatgtttactagatcgtccacccgtgctgccgcacgggtcatatatattgtaagtgtagtacacaaaagcaacattttataatacagtcccaacttata 23976797  T
Q  257 attttaatgtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataac 353  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||||    
T  23976798 attttaatgtcataattttaaatacaactgtagaaggagattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataac 23976897  T
Q  354 agaagagattttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  23976898 agaagagattttgccaaaagcactgcacacatctctttttctcgtgagtcaattacattaaaaattcatatattatat 23976975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 44376079 - 44376144
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  44376079 actagatcgtccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 44376144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 45117179 - 45117256
Alignment:
Q  350 taacagaagagattttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatatt 427  Q
    |||||||||||||||||| ||||||| | |||| |||| || ||| ||||||||||||||||| || |||||||||||    
T  45117179 taacagaagagattttgctaaaagcaatacacatatctcttgttcccgtgagtcaattacattaaatattcatatatt 45117256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 16904961 - 16905017
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  16904961 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 16905017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 37590813 - 37590869
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  37590813 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaatcaaa 37590869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 46256254 - 46256198
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  46256254 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 46256198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 18209731 - 18209630
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataatt 273  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||   |||||||||||  ||| | || |   ||||||||||||||||||||| |||    
T  18209731 tccacccgtgctgccgcacgggtcatatacattcaaaatgtagtaggtcaaagcaaaattcaatagttcaattataacttataattttaatgtcattatt 18209632  T
Q  274 tt 275  Q
    ||    
T  18209631 tt 18209630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 12090468 - 12090524
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  12090468 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 12090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 30824931 - 30824987
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  30824931 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 30824987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 33139480 - 33139536
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  33139480 tccacccgtgctgccgcacgggtcatatacattgtagatttagtagacaaaaacaaa 33139536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 37651886 - 37651830
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  37651886 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 37651830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 47142809 - 47142865
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||  ||||||||||||||||  |||||||||||||| ||||    
T  47142809 tccacccgtgctgccgcactggtcatatacattgtagatgtagtagacaaaaacaaa 47142865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 52434844 - 52434788
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  52434844 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 52434788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 11238222 - 11238181
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacatt 206  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  11238222 actagatcggccacccgtgctgccgcacgggtcatatacatt 11238181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 39058357 - 39058422
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||  |||||| ||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  39058357 actagattttccacctgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 39058422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 9199865 - 9199905
Alignment:
Q  164 tactagatcgtccacccgtgctgccgcatgggtcatataca 204  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  9199865 tactagatcgtctacccgtgctgccgcacgggtcatataca 9199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 9201404 - 9201444
Alignment:
Q  164 tactagatcgtccacccgtgctgccgcatgggtcatataca 204  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  9201404 tactagatcgtctacccgtgctgccgcacgggtcatataca 9201444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 16917897 - 16917953
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||| ||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  16917897 tccacctgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 16917953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 31965978 - 31966013
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgta 209  Q
    |||||||||||||||||| |||||||||||||||||    
T  31965978 tccacccgtgctgccgcacgggtcatatacattgta 31966013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 35903678 - 35903632
Alignment:
Q  185 tgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaa 231  Q
    ||||||| || |||||||||| |||| ||||||||||||||||||||    
T  35903678 tgccgcacggatcatatacatcgtaaatgtagtagacaaaagcaaaa 35903632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 53143273 - 53143327
Alignment:
Q  176 cacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||| |||||||||||||||||  | || ||||||||| ||||    
T  53143273 cacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaa 53143327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 17558825 - 17558862
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  17558825 actagatcgtctacccgtgctgccgcacgggtcatata 17558862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 32225583 - 32225620
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  32225583 actagatcgtccaccggtgctgccgcacgggtcatata 32225620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 48118529 - 48118578
Alignment:
Q  160 tatttactagatcgtccacccgtgctgccgcatgggtcatatacattgta 209  Q
    |||||||||||   |||||||||||||||||| | |||||||||||||||    
T  48118529 tatttactagactttccacccgtgctgccgcacgagtcatatacattgta 48118578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 22289966 - 22290022
Alignment:
Q  176 cacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaat 232  Q
    |||||||||||||||| | ||||||||||||| || ||||| || ||||| ||||||    
T  22289966 cacccgtgctgccgcacgagtcatatacattgaaaatgtagaaggcaaaaacaaaat 22290022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 35760810 - 35760766
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgta 209  Q
    |||||||  |||||||||||||||||| | |||||||||||||||    
T  35760810 actagattttccacccgtgctgccgcacgagtcatatacattgta 35760766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 37340614 - 37340669
Alignment:
Q  176 cacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaat 232  Q
    ||||||||||| |||| |||||||||||| |||||   |||||||||||||||||||    
T  37340614 cacccgtgctgacgcacgggtcatatacaatgtaa-aatagtagacaaaagcaaaat 37340669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 41387346 - 41387290
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||| ||||||||||| | |||||||||||||||||  | |||||||||||| ||||    
T  41387346 tccatccgtgctgccgtacgggtcatatacattgtagatatagtagacaaaaacaaa 41387290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 165 - 431
Target Start/End: Original strand, 405354 - 405623
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  405354 actagatcgtccacccgtgctgccgcacgggtcatatacattgtaagtatagtagacaaaagcaaaattttataatacaatcccaacttataattttaat 405453  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataacagaagaga 361  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||||| ||||||    
T  405454 gtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataacataagaga 405553  T
Q  362 ttttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  405554 ttttgccaaaagcactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 405623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 163 - 431
Target Start/End: Complemental strand, 17695664 - 17695393
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataatttta 262  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17695664 ttactagatcgtccacccgtgctgccgcacgggtaatatacattgtaagtgtagtagataaaagcaaaattttataatacagtcccaacttataatttta 17695565  T
Q  263 atgtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataacagaaga 359  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||||| ||||    
T  17695564 atgtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataacataaga 17695465  T
Q  360 gattttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17695464 gattttgccaaaaccaccgcacacatctctttttctcgtgagtcaattacattgaaaattcatctattatat 17695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 269 - 431
Target Start/End: Original strand, 44831791 - 44831956
Alignment:
Q  269 taattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatatt-tttaataacagaagagatttt 365  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||  |     ||  |||  |||||||||| ||||||||||    
T  44831791 taattttaaatacaactatagaaggaaattgtataattgattctaaatatttttagtgacattgagcagcaatctataatttaataacataagagatttt 44831890  T
Q  366 gccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44831891 gccaaaagcactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 44831956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 165 - 277
Target Start/End: Original strand, 44831134 - 44831246
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44831134 actagatagtccacccgtgctgccgctcgggtcatatacattgtaagtgtagtagataaaagcaaaattttataatacagtcccaacttataattttaat 44831233  T
Q  265 gtcataattttaa 277  Q
    |||||||||||||    
T  44831234 gtcataattttaa 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 1848914 - 1849044
Alignment:
Q  202 acattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataattttaaatacaactatagaaggaaattgta 301  Q
    ||||| ||| |||||||||||| |||||||||||||| |||| |||||||||||| ||||||| ||||||||||||| | ||||||| ||| | ||||||    
T  1848914 acattataaatgtagtagacaacagcaaaattttatagtacaatcccaacttatatttttaatatcataattttaaacagaactataaaagcagattgta 1849013  T
Q  302 taa--tagattcaaaatatttttagtgacat 330  Q
    |||  | ||||||||||||||||||||||||    
T  1849014 taattttgattcaaaatatttttagtgacat 1849044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 39997911 - 39997855
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  39997911 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 39997855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 6299010 - 6299085
Alignment:
Q  155 taaaatatttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||| |||||||||   |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  6299010 taaaatgtttactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 6299085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 23353631 - 23353680
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaa 223  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  23353631 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaa 23353680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 28583084 - 28583019
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||  |||||||||||||||||| |||||||||||||||||  ||||||||| |||| ||||    
T  28583084 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaa 28583019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 995824 - 995880
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  995824 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 995880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 10478157 - 10478101
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  10478157 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 10478101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 11142687 - 11142631
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| || ||||||||||||||  |||||||||||||| ||||    
T  11142687 tccacccgtgctgccgcacggatcatatacattgtagatgtagtagacaaaaacaaa 11142631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 11725410 - 11725354
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||    
T  11725410 tccacccgtgctgctgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 11725354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 15961352 - 15961296
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  15961352 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 15961296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 18175601 - 18175545
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  18175601 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 18175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 18997920 - 18997864
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  18997920 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 18997864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 30473893 - 30473949
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  30473893 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 30473949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 32110870 - 32110926
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  32110870 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 32110926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 18842124 - 18842073
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    ||||||||| |||||||| |||||||||||||||||  ||||||||||||||    
T  18842124 tccacccgttctgccgcacgggtcatatacattgtagatgtagtagacaaaa 18842073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 44837129 - 44837078
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    |||||||||||||||||| |||| ||||||||||||  ||||||||||||||    
T  44837129 tccacccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaa 44837078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 35122331 - 35122387
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||| ||||| |||| |||||||||||||||||  |||||||||||||| ||||    
T  35122331 tccacccctgctgtcgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 35122387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 44832195 - 44832251
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||    
T  44832195 tccacccgtgttgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 44832251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 18569085 - 18569034
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    |||||||||||| ||||| |||||||||||||||||  ||| ||||||||||    
T  18569085 tccacccgtgctaccgcacgggtcatatacattgtagatgttgtagacaaaa 18569034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 16367916 - 16367879
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  16367916 actagatcgtctacccgtgctgccgcacgggtcatata 16367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 24409093 - 24409040
Alignment:
Q  177 acccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||| |||| ||||    
T  24409093 acccgtgttgccgcacgggtcatatacattgtagatgtagtagataaaaacaaa 24409040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 42308123 - 42308160
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  42308123 actagatcgtccacctgtgctgccgcacgggtcatata 42308160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 165 - 431
Target Start/End: Original strand, 28947454 - 28947723
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28947454 actagatcgtccacccgtgctgccgcacgggtcatatacattataagtgtagtagacaaaagcaaaattttataatacagtctcaacttataattttaat 28947553  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataacagaagaga 361  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||||| ||||||    
T  28947554 gtcataattttaaatacaactatagaaagaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataacaaaagaga 28947653  T
Q  362 ttttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  28947654 ttttgccaaaagcactgcacacatctctttttctcgtgagtcagttacattgaaaattcatatattatat 28947723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 165 - 430
Target Start/End: Original strand, 29387887 - 29388155
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  29387887 actagatcgtccacccgtactgccgcacgggtcatatacattgtaagtgtagtagacaaaaacaaaattttataatacaatcccaacttataattttaat 29387986  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataacagaagaga 361  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||||| ||||||    
T  29387987 gtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataacataagaga 29388086  T
Q  362 ttttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattata 430  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29388087 ttttgccaaaagtactacacacatctctttttctcgtgagtcaattacattgaaaattcatatattata 29388155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 1232016 - 1231960
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||    
T  1232016 tccacccgtgctgccgcacgggtcatatacattgtaaatatagtagacaaaaacaaa 1231960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 35614287 - 35614231
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||||||| ||||    
T  35614287 tccacccgtgctaccgcacgggtcatatacattgtaaatgtagtagacaaaaacaaa 35614231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 38444851 - 38444795
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||    
T  38444851 tccacccgtgatgccgcatgggtcatatacattgtagatgtagtagacaaaaacaaa 38444795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 52957096 - 52957034
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaatttta 236  Q
    |||||||||||||||||| |||||||||||||||||  |||| ||| | ||||||||||||||    
T  52957096 tccacccgtgctgccgcacgggtcatatacattgtagatgtattaggccaaagcaaaatttta 52957034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 4241091 - 4241031
Alignment:
Q  75 aaaaaatattaatgatcggcaagtgaaataaattcacagcagcttcgcatacgttgcaaacc 136  Q
    |||||||||||||||| |||||||||||||||||||| ||  ||||||||||||| ||||||    
T  4241091 aaaaaatattaatgattggcaagtgaaataaattcacggc-tcttcgcatacgttccaaacc 4241031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 4266601 - 4266545
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  4266601 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 4266545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 18706518 - 18706574
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| | |||||||||||||||  |||||||||||||| ||||    
T  18706518 tccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaa 18706574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 29942238 - 29942182
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  29942238 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 29942182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 31018209 - 31018265
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  31018209 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 31018265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 34888695 - 34888751
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  34888695 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 34888751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 38913756 - 38913812
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  38913756 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 38913812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 50326221 - 50326165
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  50326221 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 50326165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 18855242 - 18855292
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaa 224  Q
    |||||||||||||||||| |||||||||||||||||  || ||||||||||    
T  18855242 tccacccgtgctgccgcacgggtcatatacattgtagatgcagtagacaaa 18855292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 23482716 - 23482766
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaa 224  Q
    |||||||||||||||||| | |||||||||||||||  |||||||||||||    
T  23482716 tccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaa 23482766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 14009895 - 14009850
Alignment:
Q  180 cgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||    
T  14009895 cgtgctgccgcacgggtcatataaattgtaaatgtagtagacaaaa 14009850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 2951375 - 2951411
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaa 210  Q
    |||||||||||||||||| ||||||||||||||||||    
T  2951375 tccacccgtgctgccgcacgggtcatatacattgtaa 2951411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 9216251 - 9216195
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | ||||||| |||| ||||    
T  9216251 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagataaaaacaaa 9216195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 52687123 - 52687179
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||| |||| |||||||||||||||||  ||||||| |||||| ||||    
T  52687123 tccacccgtgctgtcgcacgggtcatatacattgtagatgtagtatacaaaaacaaa 52687179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 51387129 - 51387166
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  51387129 actagatcgtctacccgtgctgccgcacgggtcatata 51387166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 8e-99; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 165 - 431
Target Start/End: Original strand, 30096276 - 30096545
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30096276 actagatcgtccacccgtgctgccgcacggatcatatacattgtaagtattgtagacaaaagcaaaattttataatacagtcccaacttataattttaat 30096375  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataacagaagaga 361  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||||| ||||||    
T  30096376 gtcataatttgaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataacataagaga 30096475  T
Q  362 ttttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30096476 ttttgccaaaaacactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 30096545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 165 - 431
Target Start/End: Original strand, 30088702 - 30088957
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||               
T  30088702 actagatcgtccatccgtgctgccgcacgggtcatatacattgtaagtattgtagacaaaaacaaaattttataatacagtcccaactt----------- 30088790  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataacagaagaga 361  Q
       |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||| |||||||     
T  30088791 ---ataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataaaagaagagg 30088887  T
Q  362 ttttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30088888 ttttgccaaaagcactgcacacatctctttttctcgtgagtcaattacattgaaaattcatatattatat 30088957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 286 - 431
Target Start/End: Original strand, 30089193 - 30089341
Alignment:
Q  286 atagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatatt-tttaataacagaagagattttgccaaaagcactgcaca 382  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||  ||    ||  |||  ||||||||||||| ||| ||||||||||||||||||||    
T  30089193 atagaagaaaattgtataattgattcaaaatatttttagtgacattgaacagcaatctataatttaataacagaaaagaatttgccaaaagcactgcaca 30089292  T
Q  383 catctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30089293 catctctttttctcgtgagtcaattacattgaaaattcatatattatat 30089341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 25099234 - 25099301
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  25099234 ttactagatcgtccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 25099301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 25158324 - 25158391
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  25158324 ttactagatcgtccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 25158391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 275
Target Start/End: Original strand, 8179762 - 8179864
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaatttta-taatacagtcccaacttataattttaatgtcataat 272  Q
    |||||||||||||||||| || ||||||| ||||||  |||||||||| ||||||||| |||| |||  || |  |||||||||||||||||||||| ||    
T  8179762 tccacccgtgctgccgcacggatcatatatattgtagatgtagtagaccaaagcaaaagtttaataactcaattacaacttataattttaatgtcatcat 8179861  T
Q  273 ttt 275  Q
    |||    
T  8179862 ttt 8179864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 20655058 - 20655114
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  20655058 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 20655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 33375984 - 33375928
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  33375984 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 33375928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 2398951 - 2399007
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  2398951 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 2399007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 10729451 - 10729507
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  10729451 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 10729507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 16526315 - 16526371
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  16526315 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 16526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 20874908 - 20874852
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  20874908 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 20874852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 34107347 - 34107403
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  34107347 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 34107403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 34110872 - 34110816
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  34110872 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 34110816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 38246874 - 38246930
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  38246874 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 38246930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 40177261 - 40177205
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  40177261 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 40177205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 4082628 - 4082591
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4082628 actagatcgtccacccgtgctgccgcacgggtcatata 4082591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 16349715 - 16349752
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  16349715 actagatcgtccacccgtgctgccgcacgggtcatata 16349752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 1396209 - 1396153
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| ||||||||||||||| |  ||||| |||||||| ||||    
T  1396209 tccacccgtgctgccgcacgggtcatatacattgcagatgtagcagacaaaaacaaa 1396153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 40951524 - 40951487
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40951524 actagatcgtctacccgtgctgccgcacgggtcatata 40951487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 7e-96; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 167 - 431
Target Start/End: Complemental strand, 37099771 - 37099504
Alignment:
Q  167 tagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgt 266  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  37099771 tagatcgtccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagtaaaattttataatacagtcccaacttgtaattttaatgt 37099672  T
Q  267 cataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacataattttaaaatat---ttttaataacagaagagatt 363  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||      | ||| |    |||||||||| ||||||||    
T  37099671 cataattttaaatacaactatagaaggaaattgtataattgattcaaaatgtttttagtgacattgagcaacaatctataatttaataacataagagatt 37099572  T
Q  364 ttgccaaaagcactgcacacatctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  37099571 ttgccaaaagcattgcacacatctctttttctggtaagtcaattacattgaaaattcatatattatat 37099504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 19924105 - 19923990
Alignment:
Q  32 catgagatttctaccaaataattcattttagagatatttatttaaaaaa-tattaatgatcggcaagtgaaataaattcacagcagcttcgcatacgttg 130  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  19924105 catgagatttcgaccaaattattcattttagagatatttatttaaaaaaatattaatgattggcaagtcaaataaattcatagcagcttcgcatacgttg 19924006  T
Q  131 caaaccctaatagttg 146  Q
    |||||||||| |||||    
T  19924005 caaaccctaaaagttg 19923990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 286 - 431
Target Start/End: Complemental strand, 37099268 - 37099121
Alignment:
Q  286 atagaaggaaattgtataatagattcaaaatatttttagtgacat--aattttaaaatatt-tttaataacagaagagattttgccaaaagcactgcaca 382  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  |     ||  |||  |||||||||| |||||||||||||||||||||||||||    
T  37099268 atagaaggaaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataaca-aagagattttgccaaaagcactgcaca 37099170  T
Q  383 catctatttttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37099169 catctctttttctcgtgagtcaattacattgaaaattcatatattatat 37099121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 19940091 - 19939977
Alignment:
Q  32 catgagatttctaccaaataattcattttagagatatttatttaaaaaatattaatgatcggcaagtgaaataaattcaca-gcagcttcgcatacgttg 130  Q
    ||||||||| | ||||||| || | ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||||||||    
T  19940091 catgagattccaaccaaatgat-cttttcagagatatttatttaaaaaatattaatgattggcaagtgaaataaattcacacagagctttgcatacgttg 19939993  T
Q  131 caaaccctaatagttg 146  Q
    | |||||||| |||||    
T  19939992 ccaaccctaaaagttg 19939977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 4584443 - 4584499
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  4584443 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 4584499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 6460177 - 6460233
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  6460177 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 6460233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 26949018 - 26948962
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  26949018 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 26948962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 36076463 - 36076519
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  36076463 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 36076519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 1941729 - 1941785
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  1941729 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 1941785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 3898642 - 3898586
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  3898642 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 3898586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 12264420 - 12264364
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  12264420 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 12264364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 34121575 - 34121519
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  34121575 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 34121519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 38653936 - 38653992
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  38653936 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 38653992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 43363620 - 43363676
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  43363620 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 43363676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 49672782 - 49672726
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  49672782 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 49672726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 55041592 - 55041648
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||| ||||| |||||||||||||||||  |||||||||||||| ||||    
T  55041592 tccacccgtgctaccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 55041648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 5561553 - 5561594
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacatt 206  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  5561553 actagatcgtctacccgtgctgccgcacgggtcatatacatt 5561594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 20671469 - 20671413
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||| || | |||||||||||||||  |||||||||||||| ||||    
T  20671469 tccacccgtgctgccacacgagtcatatacattgtagatgtagtagacaaaaacaaa 20671413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 21098524 - 21098468
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | || ||||||||| ||||    
T  21098524 tccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaa 21098468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 31488631 - 31488575
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||| ||||||||||||| |||| ||||||||||||  |||||||||||||| ||||    
T  31488631 tccatccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaaacaaa 31488575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 49506358 - 49506414
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||| |||||||| |||||||||||||||||  | |||||||||||| ||||    
T  49506358 tccacccgtactgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 49506414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 40014662 - 40014697
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgta 209  Q
    |||||||||||||||||| |||||||||||||||||    
T  40014662 tccacccgtgctgccgcacgggtcatatacattgta 40014697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 44708226 - 44708264
Alignment:
Q  164 tactagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  44708226 tactagatcgtctacccgtgctgccgcacgggtcatata 44708264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 53556913 - 53556951
Alignment:
Q  167 tagatcgtccacccgtgctgccgcatgggtcatatacat 205  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  53556913 tagatcatccacccgtgctgccgcacgggtcatatacat 53556951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 5189798 - 5189854
Alignment:
Q  176 cacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaat 232  Q
    |||||||||| ||||| |||||||||| | |||||   |||||||||||||||||||    
T  5189798 cacccgtgctaccgcaagggtcatatataatgtaaaaatagtagacaaaagcaaaat 5189854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 39146649 - 39146609
Alignment:
Q  185 tgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    ||||||| |||||||||||||||||  ||||||||||||||    
T  39146649 tgccgcacgggtcatatacattgtagatgtagtagacaaaa 39146609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 44751632 - 44751672
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacat 205  Q
    |||||||| ||||||| |||||||||| |||||||||||||    
T  44751632 actagatcatccacccatgctgccgcacgggtcatatacat 44751672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 194 - 431
Target Start/End: Original strand, 10253 - 10493
Alignment:
Q  194 ggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataattttaaatacaactatagaagg 293  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10253 ggtcatatatattgtaagtgtagtagacaaaagcaaaattttataatatagtcccaacttataattttaatgtcataattttaaacacaactatagaagg 10352  T
Q  294 aaattgtataatagattcaaaatatttttagtgacat--aattttaaaatat-ttttaataacagaagagattttgccaaaagcactgcacacatctatt 390  Q
    |||||||||||| ||||||||||||||||||||||||  |     ||  |||  ||||||||||||||||||||||||||||||||| ||||||||| ||    
T  10353 aaattgtataattgattcaaaatatttttagtgacattgagcagcaatctataatttaataacagaagagattttgccaaaagcactacacacatctctt 10452  T
Q  391 tttctcgtgagtcaattacattgaaaattcatatattatat 431  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  10453 tttctcctgagtcaattacattgaaaattcatatattatat 10493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 2e-81; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 165 - 330
Target Start/End: Complemental strand, 31097941 - 31097776
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31097941 actagatcgtccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagcaacattttataatacagtcccaacttataattttaat 31097842  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat 330  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31097841 gtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacat 31097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 165 - 329
Target Start/End: Complemental strand, 32661098 - 32660934
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32661098 actagatcgtctacccgtgctgccgcacgagtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtgccaacttataattttaat 32660999  T
Q  265 gtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgaca 329  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32660998 gtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgaca 32660934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 31097669 - 31097607
Alignment:
Q  268 ataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat 330  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31097669 ataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacat 31097607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 288
Target Start/End: Complemental strand, 21651607 - 21651484
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaat 264  Q
    ||||||| ||| ||||||| | |  ||||||||||||||||||||| || | |||||| ||||||||||  ||| |||   |||||||||||||||||||    
T  21651607 actagatggtctacccgtgatacaacatgggtcatatacattgtaaatgcaatagacagaagcaaaattagatagtacttacccaacttataattttaat 21651508  T
Q  265 gtcataattttaaatacaactata 288  Q
    || |||||  ||||||||| ||||    
T  21651507 gttataataataaatacaattata 21651484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 288
Target Start/End: Complemental strand, 21681116 - 21681015
Alignment:
Q  187 ccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataattttaaatacaacta 286  Q
    ||||| ||||||||||||| |||| ||||||||||||||  |||||| ||||  |||  ||||||||||||||||||||| ||||   ||||||||| ||    
T  21681116 ccgcacgggtcatatacatcgtaaatgtagtagacaaaaataaaattatatagcacatacccaacttataattttaatgttataagaataaatacaatta 21681017  T
Q  287 ta 288  Q
    ||    
T  21681016 ta 21681015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 13786390 - 13786334
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  13786390 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 13786334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 16376554 - 16376610
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  16376554 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 16376610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 17178246 - 17178302
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||    
T  17178246 tccacccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaa 17178302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 21713688 - 21713585
Alignment:
Q  180 cgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataattttaaat 279  Q
    |||||| ||||||||||||||||||  |||  ||||||||| |||||||||||| |||| ||||  || |  ||||||||||||||| |||||  |||||    
T  21713688 cgtgctaccgcatgggtcatatacaccgtagatgtagtagataaaagcaaaattatatagtacataccaattttataattttaatgttataataataaat 21713589  T
Q  280 acaa 283  Q
    ||||    
T  21713588 acaa 21713585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 21670201 - 21670145
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||  ||||||||||||||||  |||||||||||||| ||||    
T  21670201 tccacccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaaacaaa 21670145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 21804581 - 21804637
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  21804581 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 21804637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 27903426 - 27903482
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||| ||||||  |||||||||||||| ||||    
T  27903426 tccacccgtgctgccgcacgggtcatatatattgtagatgtagtagacaaaaacaaa 27903482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 33916956 - 33917012
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  33916956 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 33917012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 38163348 - 38163404
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  38163348 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 38163404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 40969111 - 40969063
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagaca 222  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||    
T  40969111 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagaca 40969063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 42242163 - 42242219
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  42242163 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 42242219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 24924294 - 24924243
Alignment:
Q  179 ccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  24924294 ccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 24924243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 43933553 - 43933604
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    |||||||||||| ||||| |||||||||||||||||  ||||||||||||||    
T  43933553 tccacccgtgctaccgcaagggtcatatacattgtagatgtagtagacaaaa 43933604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 3840650 - 3840706
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| | |||||||||||||||  | |||||||||||| ||||    
T  3840650 tccacccgtgctgccgcacgagtcatatacattgtagatatagtagacaaaaacaaa 3840706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 31373676 - 31373620
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | || ||||||||| ||||    
T  31373676 tccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaa 31373620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 7853730 - 7853687
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacatt 206  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||    
T  7853730 ttactagatcgtctacccgtgctaccgcacgggtcatatacatt 7853687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 21342043 - 21342008
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgta 209  Q
    |||||||||||||||||| |||||||||||||||||    
T  21342043 tccacccgtgctgccgcacgggtcatatacattgta 21342008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 44579828 - 44579787
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacatt 206  Q
    ||||||||||| |||| |||||||||| ||||||||||||||    
T  44579828 actagatcgtctacccatgctgccgcacgggtcatatacatt 44579787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 27138537 - 27138593
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||  ||||||||||||| ||  | |||||||||||| ||||    
T  27138537 tccacccgtgctgccgcacaggtcatatacattctagatatagtagacaaaaacaaa 27138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 373
Target Start/End: Complemental strand, 31097589 - 31097561
Alignment:
Q  345 tttaataacagaagagattttgccaaaag 373  Q
    |||||||||||||||||||||||||||||    
T  31097589 tttaataacagaagagattttgccaaaag 31097561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 373
Target Start/End: Complemental strand, 31097758 - 31097730
Alignment:
Q  345 tttaataacagaagagattttgccaaaag 373  Q
    |||||||||||||||||||||||||||||    
T  31097758 tttaataacagaagagattttgccaaaag 31097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 6e-78; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 163 - 330
Target Start/End: Complemental strand, 31572512 - 31572345
Alignment:
Q  163 ttactagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataatttta 262  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31572512 ttactggatcatccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagcaacattttataatacagtcccaacttataatttta 31572413  T
Q  263 atgtcataattttaaatacaactatagaaggaaattgtataatagattcaaaatatttttagtgacat 330  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31572412 atgtcataattttaaatacaactatagaaggaaattgtataattgattcaaaatatttttagtgacat 31572345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 8700481 - 8700425
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  8700481 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 8700425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 19596372 - 19596428
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  19596372 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaa 19596428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 41663457 - 41663401
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||    
T  41663457 tccacccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaa 41663401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 6120772 - 6120716
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  6120772 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 6120716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 18351771 - 18351715
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  18351771 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 18351715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 27944805 - 27944861
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  27944805 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 27944861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 31424229 - 31424173
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| | |||||||||||||||  |||||||||||||| ||||    
T  31424229 tccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaa 31424173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 41664730 - 41664674
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  41664730 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 41664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 44902301 - 44902245
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  44902301 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 44902245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 20545045 - 20544989
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | | |||||||||| ||||    
T  20545045 tccacccgtgctgccgcacgggtcatatacattgtagatatggtagacaaaaacaaa 20544989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 42442184 - 42442128
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||    
T  42442184 tccacccgtgttgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 42442128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 22136278 - 22136316
Alignment:
Q  164 tactagatcgtccacccgtgctgccgcatgggtcatata 202  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  22136278 tactagatcgtccacccgtgttgccgcacgggtcatata 22136316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 692230 - 692267
Alignment:
Q  193 gggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  692230 gggtcatatacattgtaaatgtagtagacaaaaacaaa 692267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 2988939 - 2988911
Alignment:
Q  176 cacccgtgctgccgcatgggtcatataca 204  Q
    |||||||||||||||||||||||||||||    
T  2988939 cacccgtgctgccgcatgggtcatataca 2988911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 373
Target Start/End: Complemental strand, 31572327 - 31572299
Alignment:
Q  345 tttaataacagaagagattttgccaaaag 373  Q
    |||||||||||||||||||||||||||||    
T  31572327 tttaataacagaagagattttgccaaaag 31572299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 79105 - 79195
Alignment:
Q  198 atatacattgtaagtgtagtagacaaaagcaaaattttataatacagtcccaacttataattttaatgtcataattttaaatacaactata 288  Q
    ||||||||||||| ||||||||||||||||||||||| |||   || ||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  79105 atatacattgtaaatgtagtagacaaaagcaaaatttaatagcgcaatccaaacttataactttaatgtcatgattttgaatacaactata 79195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 6061 - 6121
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    |||||||  |||||||||||||||||| |||||||||||||||||  ||| ||||||||||    
T  6061 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaa 6121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 6071 - 6131
Alignment:
Q  165 actagatcgtccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaa 225  Q
    |||||||  |||||||||||||||||| |||||||||||||||||  ||| ||||||||||    
T  6071 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaa 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 46494 - 46438
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||| ||||    
T  46494 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 46438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 19567 - 19511
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||| | ||||| |||||||||||  |||||||||||||| ||||    
T  19567 tccacccgtgctgccgtacgggtcctatacattgtagatgtagtagacaaaaacaaa 19511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 149059 - 149115
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| |||||||||| ||||||  | |||||||||||| ||||    
T  149059 tccacccgtgctgccgcacgggtcatataaattgtagatatagtagacaaaaacaaa 149115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 5287 - 5343
Alignment:
Q  174 tccacccgtgctgccgcatgggtcatatacattgtaagtgtagtagacaaaagcaaa 230  Q
    |||||||||||||||||| ||| |||||||||||||  | || ||||||||| ||||    
T  5287 tccacccgtgctgccgcacgggacatatacattgtagatataatagacaaaaacaaa 5343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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