View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11309A_low_245 (Length: 243)
Name: NF11309A_low_245
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11309A_low_245 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 37888097 - 37887883
Alignment:
| Q |
29 |
tataaaattaacaaaagatgcaaagatttgatcaaatttcaattgggttctaatcacatctaaatcttcacattatttaaccaaaacaaatatatgcagt |
128 |
Q |
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| T |
37888097 |
tataaaattaacaaaagatgcaaagatttgatcaaatttcaattgggttctaatcacatctaaatcttcacattatttaaccaaaacaaatatatgcagt |
37887998 |
T |
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| Q |
129 |
ataggaaagtgaaatattaatatatacataatccacacatcaaaagttacaaacattgaaattagtaactaatctattaaaacacgattcagcaaagaac |
228 |
Q |
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| T |
37887997 |
ataggaaagtgaaatattaatatatacataatccacacatcaaaagttacaaacattgaaattagtaactaatctattaaaacacgattcagcaaagaac |
37887898 |
T |
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| Q |
229 |
aatatatacatatat |
243 |
Q |
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||||||||||||||| |
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| T |
37887897 |
aatatatacatatat |
37887883 |
T |
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