View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11309A_low_267 (Length: 240)

Name: NF11309A_low_267
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11309A_low_267
NF11309A_low_267
[»] chr2 (54 HSPs)
chr2 (123-238)||(41569469-41569585)
chr2 (2-98)||(18176996-18177092)
chr2 (4-98)||(41569317-41569411)
chr2 (25-96)||(37257508-37257579)
chr2 (25-98)||(42678805-42678879)
chr2 (25-98)||(433906-433979)
chr2 (25-98)||(4952422-4952495)
chr2 (3-98)||(26738801-26738895)
chr2 (25-98)||(29051597-29051668)
chr2 (25-98)||(31389603-31389676)
chr2 (7-98)||(42223876-42223967)
chr2 (29-98)||(4758585-4758654)
chr2 (2-84)||(7552625-7552709)
chr2 (25-98)||(35705550-35705622)
chr2 (34-86)||(6941011-6941063)
chr2 (29-97)||(29879899-29879967)
chr2 (25-88)||(2464192-2464254)
chr2 (25-86)||(5200168-5200228)
chr2 (29-98)||(6999014-6999083)
chr2 (25-98)||(39213712-39213785)
chr2 (184-237)||(41588523-41588576)
chr2 (25-77)||(5027233-5027285)
chr2 (42-98)||(28245784-28245840)
chr2 (2-77)||(670391-670466)
chr2 (25-88)||(32869892-32869955)
chr2 (34-84)||(4753231-4753281)
chr2 (34-84)||(28679387-28679437)
chr2 (34-98)||(2221049-2221114)
chr2 (33-98)||(6170686-6170751)
chr2 (25-98)||(7574491-7574564)
chr2 (25-98)||(10711780-10711853)
chr2 (25-85)||(20911870-20911930)
chr2 (61-98)||(36802952-36802989)
chr2 (25-98)||(40937006-40937079)
chr2 (42-98)||(42532697-42532754)
chr2 (34-85)||(18876871-18876923)
chr2 (34-97)||(26277152-26277216)
chr2 (48-98)||(4139272-4139322)
chr2 (25-98)||(9377512-9377585)
chr2 (48-98)||(13347780-13347830)
chr2 (64-98)||(34119633-34119667)
chr2 (64-98)||(38560734-38560768)
chr2 (64-98)||(42866806-42866840)
chr2 (25-98)||(9634378-9634451)
chr2 (25-86)||(17999620-17999680)
chr2 (25-98)||(25881600-25881673)
chr2 (25-98)||(35589329-35589402)
chr2 (42-98)||(42372535-42372592)
chr2 (49-85)||(13711332-13711368)
chr2 (25-61)||(17779475-17779511)
chr2 (42-98)||(18723650-18723706)
chr2 (54-98)||(29712034-29712078)
chr2 (43-98)||(40700251-40700307)
chr2 (42-98)||(44711948-44712004)
[»] chr5 (40 HSPs)
chr5 (4-98)||(5042304-5042398)
chr5 (2-88)||(2688905-2688991)
chr5 (25-98)||(18842263-18842336)
chr5 (2-98)||(35098924-35099020)
chr5 (25-98)||(37700516-37700588)
chr5 (25-88)||(33620674-33620737)
chr5 (25-98)||(4430878-4430951)
chr5 (25-98)||(6931001-6931074)
chr5 (25-98)||(8267762-8267835)
chr5 (25-98)||(5821553-5821627)
chr5 (25-98)||(16437506-16437580)
chr5 (25-98)||(21064168-21064241)
chr5 (25-98)||(43441794-43441867)
chr5 (25-98)||(2224846-2224920)
chr5 (25-88)||(15267850-15267913)
chr5 (2-85)||(23126260-23126342)
chr5 (25-98)||(9581635-9581708)
chr5 (25-98)||(19839928-19840001)
chr5 (25-98)||(20770187-20770260)
chr5 (25-98)||(8675375-8675448)
chr5 (29-98)||(39628845-39628914)
chr5 (42-98)||(6517768-6517824)
chr5 (42-98)||(43196584-43196640)
chr5 (43-98)||(189663-189718)
chr5 (29-84)||(42267416-42267470)
chr5 (25-98)||(1839287-1839360)
chr5 (63-97)||(6292178-6292212)
chr5 (34-84)||(17402872-17402922)
chr5 (64-98)||(21136319-21136353)
chr5 (2-84)||(39088788-39088869)
chr5 (64-98)||(41175687-41175721)
chr5 (25-87)||(41724256-41724318)
chr5 (25-98)||(9226357-9226429)
chr5 (25-98)||(10649491-10649564)
chr5 (25-98)||(15478714-15478787)
chr5 (25-98)||(15952987-15953060)
chr5 (25-98)||(18397107-18397180)
chr5 (25-98)||(19481124-19481197)
chr5 (25-98)||(34124677-34124750)
chr5 (25-98)||(38704139-38704212)
[»] chr7 (48 HSPs)
chr7 (2-98)||(29162895-29162991)
chr7 (2-98)||(32815224-32815320)
chr7 (25-98)||(38779686-38779759)
chr7 (25-98)||(39231670-39231743)
chr7 (25-98)||(40353320-40353393)
chr7 (1-98)||(47078170-47078266)
chr7 (2-98)||(13162975-13163071)
chr7 (2-98)||(19785998-19786094)
chr7 (25-97)||(39332042-39332114)
chr7 (25-98)||(37808706-37808779)
chr7 (25-98)||(41666864-41666937)
chr7 (25-85)||(13906399-13906459)
chr7 (25-97)||(39137209-39137281)
chr7 (25-98)||(21023059-21023132)
chr7 (25-85)||(41402577-41402637)
chr7 (25-98)||(13729782-13729855)
chr7 (25-97)||(28036801-28036873)
chr7 (25-84)||(26041262-26041320)
chr7 (27-80)||(41026132-41026185)
chr7 (25-98)||(44184501-44184574)
chr7 (6-93)||(29002669-29002754)
chr7 (34-98)||(44495048-44495112)
chr7 (64-98)||(20482583-20482617)
chr7 (25-98)||(39029914-39029988)
chr7 (25-95)||(39823868-39823937)
chr7 (25-98)||(10055574-10055647)
chr7 (25-98)||(21822541-21822614)
chr7 (25-98)||(41399105-41399178)
chr7 (29-98)||(43573489-43573558)
chr7 (36-85)||(46653040-46653089)
chr7 (42-98)||(21559854-21559910)
chr7 (42-98)||(33180669-33180725)
chr7 (42-98)||(35452532-35452588)
chr7 (25-93)||(35588833-35588901)
chr7 (64-98)||(11564949-11564983)
chr7 (25-98)||(18111553-18111627)
chr7 (49-98)||(35600727-35600777)
chr7 (64-98)||(40231687-40231721)
chr7 (64-98)||(46532558-46532592)
chr7 (25-83)||(46725676-46725734)
chr7 (64-98)||(47495026-47495060)
chr7 (25-98)||(11352916-11352989)
chr7 (64-97)||(31844586-31844619)
chr7 (2-67)||(46773583-46773648)
chr7 (25-97)||(3062387-3062459)
chr7 (25-93)||(12645852-12645920)
chr7 (25-97)||(16980354-16980425)
chr7 (42-98)||(36019473-36019528)
[»] chr8 (42 HSPs)
chr8 (4-98)||(45529167-45529261)
chr8 (25-98)||(1633832-1633905)
chr8 (25-98)||(16966841-16966914)
chr8 (2-98)||(7955926-7956022)
chr8 (2-98)||(11017861-11017957)
chr8 (25-98)||(7478836-7478908)
chr8 (2-98)||(11657920-11658015)
chr8 (2-98)||(36110194-36110290)
chr8 (25-84)||(32843884-32843943)
chr8 (2-98)||(7586082-7586177)
chr8 (24-96)||(13971182-13971254)
chr8 (8-98)||(36531651-36531740)
chr8 (25-98)||(30135957-30136030)
chr8 (25-98)||(35564345-35564418)
chr8 (25-98)||(40739855-40739927)
chr8 (25-98)||(1871557-1871629)
chr8 (25-98)||(30439448-30439521)
chr8 (25-98)||(41159831-41159904)
chr8 (25-98)||(41521024-41521097)
chr8 (42-98)||(7592905-7592961)
chr8 (2-98)||(37783890-37783986)
chr8 (42-98)||(38234063-38234119)
chr8 (43-98)||(33589190-33589245)
chr8 (34-98)||(4994437-4994502)
chr8 (25-97)||(32847628-32847701)
chr8 (25-78)||(34591340-34591393)
chr8 (33-98)||(6968182-6968248)
chr8 (34-98)||(2733044-2733108)
chr8 (54-98)||(36568014-36568058)
chr8 (25-84)||(8645234-8645293)
chr8 (25-80)||(39543465-39543520)
chr8 (2-97)||(42110102-42110196)
chr8 (64-98)||(9549180-9549214)
chr8 (64-98)||(16613690-16613724)
chr8 (64-98)||(34718171-34718205)
chr8 (36-97)||(1366657-1366718)
chr8 (25-98)||(16872098-16872171)
chr8 (25-98)||(31597004-31597077)
chr8 (42-98)||(5277663-5277719)
chr8 (54-98)||(6991779-6991823)
chr8 (42-98)||(7472985-7473041)
chr8 (54-98)||(16327123-16327167)
[»] chr3 (52 HSPs)
chr3 (25-98)||(44677426-44677499)
chr3 (2-98)||(390865-390961)
chr3 (2-98)||(37508417-37508513)
chr3 (2-98)||(10206892-10206988)
chr3 (25-98)||(32767732-32767805)
chr3 (25-98)||(33375916-33375989)
chr3 (25-98)||(39020101-39020174)
chr3 (25-98)||(49417631-49417703)
chr3 (2-93)||(30909090-30909181)
chr3 (7-98)||(49363175-49363266)
chr3 (25-98)||(8821686-8821759)
chr3 (25-98)||(28419156-28419229)
chr3 (4-98)||(43905029-43905123)
chr3 (25-98)||(11633669-11633742)
chr3 (25-98)||(39907488-39907561)
chr3 (25-98)||(54027998-54028071)
chr3 (26-98)||(22371247-22371319)
chr3 (2-98)||(39671016-39671112)
chr3 (25-85)||(54773695-54773755)
chr3 (2-97)||(36121878-36121973)
chr3 (33-98)||(46984582-46984647)
chr3 (25-97)||(54195396-54195469)
chr3 (25-88)||(13934545-13934607)
chr3 (25-88)||(29634014-29634077)
chr3 (35-84)||(21195842-21195891)
chr3 (25-98)||(21196180-21196253)
chr3 (25-98)||(39697164-39697237)
chr3 (25-98)||(52937239-52937312)
chr3 (29-98)||(55400055-55400124)
chr3 (2-98)||(46982822-46982918)
chr3 (42-98)||(50638310-50638366)
chr3 (2-77)||(55013079-55013154)
chr3 (25-98)||(24095348-24095421)
chr3 (33-98)||(26996372-26996435)
chr3 (49-98)||(37035491-37035541)
chr3 (2-75)||(35201459-35201531)
chr3 (29-98)||(37927151-37927220)
chr3 (25-98)||(46253678-46253751)
chr3 (34-98)||(49761363-49761428)
chr3 (25-98)||(51973310-51973383)
chr3 (42-98)||(52485528-52485585)
chr3 (43-98)||(23770705-23770758)
chr3 (25-95)||(24480393-24480463)
chr3 (34-84)||(49167821-49167871)
chr3 (29-98)||(8846547-8846616)
chr3 (34-98)||(20080129-20080193)
chr3 (25-98)||(24482905-24482978)
chr3 (25-98)||(24645412-24645485)
chr3 (42-98)||(44813406-44813463)
chr3 (25-98)||(46019518-46019591)
chr3 (25-98)||(50206912-50206985)
chr3 (25-98)||(51465856-51465929)
[»] chr4 (53 HSPs)
chr4 (2-98)||(41486062-41486158)
chr4 (25-98)||(30079902-30079975)
chr4 (2-98)||(36111314-36111411)
chr4 (2-97)||(51746277-51746372)
chr4 (4-97)||(42959328-42959422)
chr4 (25-98)||(624254-624327)
chr4 (25-98)||(31076110-31076182)
chr4 (2-98)||(21260354-21260450)
chr4 (2-98)||(33899245-33899341)
chr4 (2-98)||(37066044-37066139)
chr4 (7-98)||(6141702-6141793)
chr4 (3-98)||(41082374-41082468)
chr4 (2-98)||(5932077-5932172)
chr4 (2-98)||(9118783-9118879)
chr4 (2-98)||(14451449-14451545)
chr4 (2-98)||(51194325-51194421)
chr4 (25-88)||(12112693-12112756)
chr4 (2-85)||(17475946-17476028)
chr4 (2-73)||(50272992-50273063)
chr4 (25-88)||(53152263-53152326)
chr4 (4-98)||(25317987-25318080)
chr4 (33-98)||(30169970-30170035)
chr4 (25-98)||(39344922-39344995)
chr4 (2-98)||(47965795-47965889)
chr4 (25-98)||(54669526-54669598)
chr4 (2-98)||(26206896-26206992)
chr4 (42-98)||(28657400-28657456)
chr4 (4-84)||(35820241-35820321)
chr4 (29-98)||(48335610-48335679)
chr4 (26-84)||(48536366-48536426)
chr4 (34-86)||(2256281-2256333)
chr4 (38-88)||(6494848-6494898)
chr4 (25-98)||(28458319-28458392)
chr4 (25-98)||(47099078-47099149)
chr4 (25-98)||(439202-439275)
chr4 (25-98)||(2999168-2999241)
chr4 (64-97)||(13263378-13263411)
chr4 (29-98)||(14010064-14010133)
chr4 (25-98)||(26718424-26718497)
chr4 (25-98)||(26731052-26731125)
chr4 (25-98)||(46405916-46405989)
chr4 (25-98)||(49896608-49896681)
chr4 (25-96)||(27326694-27326765)
chr4 (25-84)||(33860716-33860775)
chr4 (64-98)||(21617239-21617273)
chr4 (28-98)||(51573577-51573647)
chr4 (25-98)||(13086078-13086151)
chr4 (25-98)||(22819705-22819778)
chr4 (49-98)||(31657702-31657751)
chr4 (25-98)||(41389815-41389887)
chr4 (42-97)||(34995377-34995433)
chr4 (34-98)||(51852132-51852196)
chr4 (54-98)||(55601672-55601716)
[»] chr6 (28 HSPs)
chr6 (25-98)||(11547471-11547544)
chr6 (25-98)||(2075393-2075466)
chr6 (25-98)||(3610903-3610976)
chr6 (2-98)||(34504076-34504172)
chr6 (2-85)||(14986663-14986746)
chr6 (4-98)||(2777238-2777331)
chr6 (2-98)||(335119-335213)
chr6 (2-86)||(30036713-30036797)
chr6 (25-98)||(13658888-13658960)
chr6 (25-98)||(4820307-4820382)
chr6 (25-85)||(5327533-5327593)
chr6 (25-98)||(22341117-22341189)
chr6 (25-98)||(30152472-30152545)
chr6 (34-98)||(3199016-3199080)
chr6 (25-98)||(754380-754453)
chr6 (25-97)||(14693194-14693266)
chr6 (25-98)||(35213503-35213576)
chr6 (25-98)||(14699606-14699679)
chr6 (25-98)||(13143324-13143397)
chr6 (42-98)||(20822827-20822883)
chr6 (33-84)||(23628429-23628481)
chr6 (25-85)||(32459458-32459518)
chr6 (63-98)||(6531163-6531198)
chr6 (49-98)||(10335606-10335656)
chr6 (64-98)||(32046754-32046788)
chr6 (34-98)||(24842424-24842488)
chr6 (25-98)||(28041756-28041829)
chr6 (42-98)||(26832702-26832758)
[»] chr1 (58 HSPs)
chr1 (25-98)||(756912-756985)
chr1 (2-98)||(1852870-1852966)
chr1 (2-98)||(3024669-3024765)
chr1 (2-98)||(3603167-3603263)
chr1 (2-98)||(16986994-16987089)
chr1 (2-98)||(20565037-20565133)
chr1 (34-98)||(21486268-21486332)
chr1 (2-98)||(33024490-33024586)
chr1 (2-98)||(34008236-34008331)
chr1 (2-98)||(47214264-47214359)
chr1 (2-98)||(51286287-51286382)
chr1 (7-98)||(46082045-46082136)
chr1 (4-98)||(38303609-38303703)
chr1 (25-98)||(7128174-7128247)
chr1 (25-98)||(8411660-8411733)
chr1 (6-98)||(902694-902786)
chr1 (2-98)||(4514373-4514469)
chr1 (2-98)||(46172326-46172422)
chr1 (25-98)||(9008281-9008354)
chr1 (25-98)||(32319252-32319324)
chr1 (25-98)||(36673674-36673746)
chr1 (25-97)||(26585821-26585893)
chr1 (2-98)||(26837508-26837604)
chr1 (2-98)||(51191844-51191940)
chr1 (7-98)||(36779193-36779284)
chr1 (25-98)||(44632584-44632656)
chr1 (30-98)||(21340578-21340646)
chr1 (1-88)||(24673132-24673218)
chr1 (52-98)||(29586049-29586095)
chr1 (25-98)||(13489718-13489791)
chr1 (25-98)||(50328083-50328156)
chr1 (29-98)||(50781516-50781585)
chr1 (29-98)||(52362538-52362607)
chr1 (2-98)||(1790564-1790660)
chr1 (43-98)||(34040460-34040515)
chr1 (29-88)||(50882056-50882115)
chr1 (25-98)||(32915014-32915087)
chr1 (25-98)||(34254293-34254366)
chr1 (29-98)||(40316890-40316959)
chr1 (25-98)||(47721465-47721538)
chr1 (25-98)||(47728457-47728530)
chr1 (25-96)||(3226002-3226073)
chr1 (43-98)||(46543402-46543457)
chr1 (48-98)||(8200131-8200181)
chr1 (48-98)||(19969527-19969577)
chr1 (64-98)||(48220125-48220159)
chr1 (49-98)||(49660235-49660285)
chr1 (25-98)||(50824797-50824870)
chr1 (25-98)||(10889988-10890061)
chr1 (25-98)||(15015454-15015527)
chr1 (65-98)||(33054070-33054103)
chr1 (25-98)||(35136900-35136973)
chr1 (64-97)||(48624933-48624966)
chr1 (42-83)||(50242382-50242423)
chr1 (25-98)||(52714843-52714916)
chr1 (25-88)||(35539215-35539278)
chr1 (25-93)||(35539301-35539369)
chr1 (42-98)||(49241464-49241520)
[»] scaffold0471 (1 HSPs)
scaffold0471 (2-98)||(63-159)
[»] scaffold0449 (1 HSPs)
scaffold0449 (2-97)||(9260-9355)
[»] scaffold0014 (1 HSPs)
scaffold0014 (33-98)||(122887-122952)
[»] scaffold0687 (1 HSPs)
scaffold0687 (42-98)||(2253-2309)
[»] scaffold0321 (1 HSPs)
scaffold0321 (25-98)||(19692-19765)
[»] scaffold0204 (1 HSPs)
scaffold0204 (29-98)||(23132-23201)
[»] scaffold0136 (1 HSPs)
scaffold0136 (25-98)||(38481-38554)
[»] scaffold0416 (1 HSPs)
scaffold0416 (49-98)||(6914-6963)
[»] scaffold0010 (1 HSPs)
scaffold0010 (25-98)||(134245-134318)
[»] scaffold1956 (1 HSPs)
scaffold1956 (25-98)||(825-899)
[»] scaffold0532 (1 HSPs)
scaffold0532 (64-98)||(11020-11054)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 41569469 - 41569585
Alignment:
Q  123 aaatggaccttaattaaattcattgttaattttgacgtgtaaaaatcatcatcaagagtagtgtacaacaaaatgaatatttgccacacatgacacaaca 222  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41569469 aaatggaccttaattaaattcattgttaattttcacgtgtaaaaatcatcatcaagagtagtgtacaacaaaatgaatatttgccacacatgacacaaca 41569568  T
Q  223 atga-ttagtccacttc 238  Q
    |||| ||||||||||||    
T  41569569 atgatttagtccacttc 41569585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 18177092 - 18176996
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || ||||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  18177092 acaacttatttgacaaccatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagagagataaagaaaaaaataatgtgagtatg 18176996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 41569317 - 41569411
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |  | || |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  41569317 aacttatttgacaaccatattttacaaagaaaaaagtggtattggtacggaaaccatagcaatagagagataaagtaaaaagtaacgtgagtatg 41569411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 37257579 - 37257508
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 96  Q
    |||||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||| |||||||    
T  37257579 ttacaaagaaaaaagtggtattgtcatggaaaccatagcaatagagagataaagtaaaaaataatgtgagta 37257508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 42678879 - 42678805
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  42678879 ttacaaagaaaaaagtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 42678805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 433979 - 433906
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  433979 ttacaaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaatgatgtgagtatg 433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 4952422 - 4952495
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||    
T  4952422 ttacaaagaaaaaaattgtattggcacgaaaaccatagcaatagagagataaagtaaaaaataatgtgaatatg 4952495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 26738801 - 26738895
Alignment:
Q  3 caacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| || | || ||||||||||||| ||| ||||||||| |||||||||| |||||||||||||| |||||||||| || ||||||    
T  26738801 caacttatttgacaatcatattttacaaagaaaaa-gtaatattggcacagaaaccatagcaatagagagataaaataaaaaataatgtaagtatg 26738895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 29051597 - 29051668
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||  |||||||||||||| || ||||||    
T  29051597 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagag--aaagtaaaaaataatgtaagtatg 29051668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 31389676 - 31389603
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| || ||||||| |||||||| |||||||||    
T  31389676 ttacaaagaaaaaagtagtattgtcacggaaaccataacaatagggaaataaagttaaaaataatgtgagtatg 31389603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 42223876 - 42223967
Alignment:
Q  7 ttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| || |||| || |||||||||||||||| |||||| |||||||||||||  |||||| ||||||| |||||| ||| |||||||||    
T  42223876 ttatttaacaattatattttacaaagaaaaaagtggtattgacacggaaaccataacaatagaaagataaaataaaaattaatgtgagtatg 42223967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 4758585 - 4758654
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||  |||||||||||||| ||||| |||||||||||||| |||||||||| |||| ||||    
T  4758585 aaagaaaaaagtgatattggcacggaaatcatagcaatagagagataaaataaaaaataatgtgaatatg 4758654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 7552709 - 7552625
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaa--accatagtaatagagagataaagtaaaaa 84  Q
    |||| ||||||||| || | || |||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| ||||||    
T  7552709 acaatttatttgacaatcatattttacaaagaaaatagtggtattggcacggaaacaccatagtaatagagagataaaataaaaa 7552625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 35705622 - 35705550
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| ||||||||| |||| ||||||||| |||| ||||||||||||||| |||| |||||||||    
T  35705622 ttacaaagaaaaa-gtagtattgacacgaaaaccatagcaataaagagataaagtaaaatataatgtgagtatg 35705550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 6941063 - 6941011
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaat 86  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  6941063 aaaaagtagtattggcacggaaaccataacaataaagagataaagtaaaaaat 6941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 29879967 - 29879899
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||| |||||||||||||| |||| ||||||||  |||||||||||||||| |||||||| ||||||||    
T  29879967 aaaggaaaaagtagtattgacacgtaaaccataacaatagagagataaagttaaaaataatgtgagtat 29879899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 2464192 - 2464254
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    ||||||||||||| ||||||||| |||||||| ||||| |||||||||||||||| ||||||||    
T  2464192 ttacaaagaaaaaggtagtattgacacggaaa-catagcaatagagagataaagttaaaaataa 2464254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 5200168 - 5200228
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaat 86  Q
    |||||||||||| ||||||||||||||||||| ||||| |||| | ||||||||||||||||    
T  5200168 ttacaaagaaaa-agtagtattggcacggaaatcatagcaataaaaagataaagtaaaaaat 5200228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 6999014 - 6999083
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  6999014 aaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 6999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 39213712 - 39213785
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||| | || ||||||||||||||||||||||||| |||||||||    
T  39213712 ttacaaagaaaaagttggtatttgcacgaaaactaaaggaatagagagataaagtaaaaaataatgtgagtatg 39213785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 41588523 - 41588576
Alignment:
Q  184 tgtacaacaaaatgaatatttgccacacatgacacaacaatgattagtccactt 237  Q
    |||||| |||||||||| |||||||||||||||||||||| | |||||||||||    
T  41588523 tgtacaccaaaatgaatctttgccacacatgacacaacaaaggttagtccactt 41588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 5027285 - 5027233
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaa 77  Q
    |||||||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  5027285 ttacaaagaaaaaaattgtattggcacgaaaaccatagcaatagagagataaa 5027233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 28245840 - 28245784
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  28245840 gtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 28245784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 670391 - 670466
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaa 77  Q
    |||||||||||||| |  | || |||||||||||||| | |||||| |||||||| ||||| ||||||||||||||    
T  670391 acaacttatttgacaaccatattttacaaagaaaaaaatggtattgacacggaaatcatagcaatagagagataaa 670466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 32869955 - 32869892
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    |||||||||||||| | ||||| ||||| |||||| || |||| ||||||||||||||||||||    
T  32869955 ttacaaagaaaaaattggtatttgcacgaaaaccaaagcaataaagagataaagtaaaaaataa 32869892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 4753281 - 4753231
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||||||| |||||||| ||||| |||||||||||||| ||||||    
T  4753281 aaaaagtagtattgacacggaaatcatagcaatagagagataaaataaaaa 4753231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 28679437 - 28679387
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||||||| || ||||| ||||| |||||||||||||||||||||    
T  28679437 aaaaagtagtattgacatggaaatcatagcaatagagagataaagtaaaaa 28679387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 2221114 - 2221049
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||| ||||||||| || || |||||||||||||||| |||||||| |||||||||    
T  2221114 aaaaagtaggtatttgcacggaaatcaaagcaatagagagataaagtgaaaaataatgtgagtatg 2221049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 6170751 - 6170686
Alignment:
Q  33 aaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  6170751 aaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaacgtgagtatg 6170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 7574564 - 7574491
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| |||||||   ||||| ||||| ||| || |||||||||||||||||||||||||||  |||||||||    
T  7574564 ttacaaggaaaaaataggtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaatattgtgagtatg 7574491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 10711853 - 10711780
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   |||||  |||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  10711853 ttacaaagaaaaaataggtatttacacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 10711780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 20911930 - 20911870
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||| ||| |||| |||||||||||| || ||||||||||||||||||||||    
T  20911930 ttacaaagaaaaaa-tagatatttgcacggaaaccaaagcaatagagagataaagtaaaaaa 20911870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 36802989 - 36802952
Alignment:
Q  61 agtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||||||||||||||| |||||||||    
T  36802989 agtaatagagagataaagtaaaaaataatgtgagtatg 36802952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 40937006 - 40937079
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||    ||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  40937006 ttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 40937079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 42532697 - 42532754
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 98  Q
    ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||||||    
T  42532697 gtattggcacgaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatg 42532754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 18876871 - 18876923
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    ||||||||| |||| |||||||||||| || ||||||||||||||||||||||    
T  18876871 aaaaagtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaa 18876923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 26277216 - 26277152
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||| |||| | |||||||| | || ||||||||||||||||||||||||| ||||||||    
T  26277216 aaaaagtagatatttgtacggaaactaaagcaatagagagataaagtaaaaaataatgtgagtat 26277152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 4139272 - 4139322
Alignment:
Q  48 gcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||| |||||||||||||||| ||||||| ||| |||||||||    
T  4139272 gcacgaaaaccaaagtaatagagagataaggtaaaaattaatgtgagtatg 4139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 9377585 - 9377512
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| |||| ||||| |||||| || ||||||||||||||||||||| ||| |||| ||||    
T  9377585 ttacaaagaaaaa-gtagatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatg 9377512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 13347780 - 13347830
Alignment:
Q  48 gcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  13347780 gcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 13347830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 34119633 - 34119667
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  34119633 aatagagagataaagtaaaaaataatgtgagtatg 34119667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 38560768 - 38560734
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  38560768 aatagagagataaagtaaaaaataatgtgagtatg 38560734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 42866840 - 42866806
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  42866840 aatagagagataaagtaaaaaataatgtgagtatg 42866806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 9634378 - 9634451
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| |  |||| |||||||||||||||| ||| |||||||||    
T  9634378 ttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatatagagataaagtaaaaagtaatgtgagtatg 9634451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 17999620 - 17999680
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaat 86  Q
    |||||||||||||  | ||||||||||| ||| || ||||||||||||||||| ||||||||    
T  17999620 ttacaaagaaaaatat-gtattggcacgaaaatcaaagtaatagagagataaaataaaaaat 17999680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 25881673 - 25881600
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   |||||   ||| |||||| || || |||||||||||||||||||||| |||||||||    
T  25881673 ttacaaagaaaaaataggtatttatacgaaaaccaaagcaacagagagataaagtaaaaaataatgtgagtatg 25881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 35589329 - 35589402
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  |  |||| ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  35589329 ttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 35589402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 42372592 - 42372535
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 98  Q
    ||||| ||||||||| || || |||||||||||||||||| ||||||| |||||||||    
T  42372592 gtatttgcacggaaatcaaaggaatagagagataaagtaaaaaaataatgtgagtatg 42372535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 13711332 - 13711368
Alignment:
Q  49 cacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13711332 cacggaaaccaaagtaatagagagagaaagtaaaaaa 13711368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 17779511 - 17779475
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccata 61  Q
    |||||||||||||||| |||||| |||||||||||||    
T  17779511 ttacaaagaaaaaagtggtattgacacggaaaccata 17779475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 18723706 - 18723650
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| ||| || || |||| |||||||||||||||||||| |||||||||    
T  18723706 gtatttgcacgaaaatcaaagcaataaagagataaagtaaaaaataatgtgagtatg 18723650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 29712078 - 29712034
Alignment:
Q  54 aaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| || ||||||||||||||||||||| ||| |||||||||    
T  29712078 aaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 29712034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 40700307 - 40700251
Alignment:
Q  43 tattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 98  Q
    ||||| |||| ||| || |||||||||||||||||||||||| |||| |||||||||    
T  40700307 tattgacacgaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatg 40700251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 44711948 - 44712004
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| ||| || || ||||||||||||||||||||||||  |||||||||    
T  44711948 gtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaatagtgtgagtatg 44712004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 5042398 - 5042304
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5042398 aacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataatgtgagtatg 5042304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 2688905 - 2688991
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    |||| ||||||||| | || || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2688905 acaaattatttgacaactatattttacaaagaaaaaagttgtattggcacggaaaccatagcaatagagagataaagtaaaaaataa 2688991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 18842263 - 18842336
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  18842263 ttacaaagaaaaaagtggtattggcacgaaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 18842336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 35098924 - 35099020
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || | |  |||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  35098924 acaacttatttgacaatcataatttacaaagaaaaaagtggtattgacacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 35099020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 37700588 - 37700516
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  37700588 ttacaaagaaaaa-gtagtattggcacggaaaccatagcaatagagagataaggtaaaaaataatgtgagtatg 37700516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 33620737 - 33620674
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  33620737 ttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaaataa 33620674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 4430878 - 4430951
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||| | |||||||||    
T  4430878 ttacaaagaaaaaagtggtattgacacgaaaaccatagcaatagagagataaagtaaaaaatgatgtgagtatg 4430951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 6931001 - 6931074
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| ||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  6931001 ttacgaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaataatgtgagtatg 6931074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 8267762 - 8267835
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||||||||||||  ||| ||||||||||||||||||||| |||||||||    
T  8267762 ttacaaagaaaaaagtggtattgacacggaaaccataacaatggagagataaagtaaaaaataatgtgagtatg 8267835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 5821553 - 5821627
Alignment:
Q  25 ttacaaagaaaaaa-gtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || |||||||||||||||||||||  |||||||||||||||||||||||| || ||||||    
T  5821553 ttacaaagaaaaaaagtggtattggcacggaaaccatagctatagagagataaagtaaaaaataatgtaagtatg 5821627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 16437506 - 16437580
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagt-aaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||||| || ||||||||| |||||||||    
T  16437506 ttacaaagaaaaaagtggtattggcacggaaaccatatgaatagagagataaggtaaaaaaataatgtgagtatg 16437580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 21064168 - 21064241
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||||||| ||||  ||||| ||||||||||||||| ||| |||||||||    
T  21064168 ttacaaagaaaaaagtggtattgacacggaaatcataacaatagggagataaagtaaaaagtaatgtgagtatg 21064241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 43441867 - 43441794
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  43441867 ttacaaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 43441794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 2224920 - 2224846
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagta--aaaaataaagtgagtatg 98  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||  |||||||| || ||||||    
T  2224920 ttacaaagaaaaa-gtagtattggcacggaaaacatagtaataaagagataaagtacgaaaaataatgtaagtatg 2224846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 15267913 - 15267850
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    ||||||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||||||||    
T  15267913 ttacaaagaaaaaagtgatattgacacgaaaaccataacaatagagagataaagtaaaaaataa 15267850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 23126260 - 23126342
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||| |||| |  ||||||||||||||||  | |||||||||||||||||  ||||||||||||| ||||||||    
T  23126260 acaacttatttgacaattatactttacaaagaaaaaagtgat-ttggcacggaaaccataacaatagagagataacgtaaaaaa 23126342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 9581708 - 9581635
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| |||| |||||||||||| |  ||||||||||||||||||||||||| |||||||||    
T  9581708 ttacaaagaaaaa-gtaggtatttgcacggaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatg 9581635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 19839928 - 19840001
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  |||| ||||| |||||| || |||||||| |||||||||||||||| |||||||||    
T  19839928 ttacaaagaaaaaattgatatttgcacgaaaaccaaagcaatagagatataaagtaaaaaataatgtgagtatg 19840001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 20770260 - 20770187
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| ||||| |||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  20770260 ttacaaagaaaaa-gtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 20770187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 8675375 - 8675448
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  8675375 ttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 8675448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 39628914 - 39628845
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| ||||||||||||  ||||||||  |||||| ||||||||| |||||||| |||| ||||    
T  39628914 aaagaaaaaaatagtattggcacaaaaaccataacaatagaaagataaagttaaaaataatgtgaatatg 39628845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 6517824 - 6517768
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  6517824 gtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 6517768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 43196584 - 43196640
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  43196584 gtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 43196640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 189663 - 189718
Alignment:
Q  43 tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  189663 tatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 189718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 42267470 - 42267416
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||| |||||||| |||||||| ||||  |||||||||||||||||||||    
T  42267470 aaagaaaaaa-tagtattgacacggaaatcataacaatagagagataaagtaaaaa 42267416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 1839287 - 1839360
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| ||| |||| ||||| |||||| |  |||||| |||||||||||||||||| |||||||||    
T  1839287 ttacaaagaaaaaa-tagatatttgcacgaaaaccaaaacaatagaaagataaagtaaaaaataatgtgagtatg 1839360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 6292212 - 6292178
Alignment:
Q  63 taatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||||||||||||||| ||||||||    
T  6292212 taatagagagataaagtaaaaaataatgtgagtat 6292178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 17402872 - 17402922
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    ||||| || ||||| |||||||| ||||| |||||||||||||||||||||    
T  17402872 aaaaattaatattgacacggaaatcatagcaatagagagataaagtaaaaa 17402922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 21136353 - 21136319
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  21136353 aatagagagataaagtaaaaaataacgtgagtatg 21136319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 39088788 - 39088869
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||||||| |  | || ||||||||||||||   |||||| || ||||||||||  |||||||||||||||||||||    
T  39088788 acaacttatttgacaacgatattttacaaagaaaaaaag-gtattgacatggaaaccatatcaatagagagataaagtaaaaa 39088869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 41175687 - 41175721
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  41175687 aatagagagataaagtaaaaaataatgtgagtatg 41175721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 41724318 - 41724256
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaata 87  Q
    ||||||||||||||   |||||  ||||||||||| | ||||||||| |||||||||||||||    
T  41724318 ttacaaagaaaaaataggtatttacacggaaaccaaaataatagagaaataaagtaaaaaata 41724256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 9226429 - 9226357
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||   |||||| ||||||||| || |  ||||||||||||||||| ||||||| |||||||||    
T  9226429 ttacaaagaaaaagtaagtatttgcacggaaatcaaaacaatagagagataaagta-aaaataatgtgagtatg 9226357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 10649564 - 10649491
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||  ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  10649564 ttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 10649491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 15478787 - 15478714
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  |  |||| ||||| |||||| |  ||| ||||||||||||||||||||| |||||||||    
T  15478787 ttacaaagaaaaagttgatatttgcacgaaaaccaaaacaattgagagataaagtaaaaaataatgtgagtatg 15478714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 15952987 - 15953060
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||    ||||| ||||| ||| || || |||||||||||||||||||||||||  ||||||||    
T  15952987 ttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatatgagtatg 15953060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 18397107 - 18397180
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   ||||| ||||| |||||| || |||||||||||||| |||||| ||| || ||||||    
T  18397107 ttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaaataaaaagtaatgtaagtatg 18397180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 19481124 - 19481197
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| | |||| |  ||||||||||||||||||||| ||| |||||||||    
T  19481124 ttacaaagaaaaagttggtatttgcacgaagaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 19481197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 34124750 - 34124677
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | |||||  |||| |||||| || |||||||| |||||||||||| ||| |||||||||    
T  34124750 ttacaaagaaaaagttggtatttacacgaaaaccaaagcaatagagaaataaagtaaaaagtaatgtgagtatg 34124677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 38704139 - 38704212
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| ||| || || |||||| | |||||||||||||||| |||||||||    
T  38704139 ttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagaaaaataaagtaaaaaataatgtgagtatg 38704212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 29162895 - 29162991
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||    
T  29162895 acaacttatttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 29162991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 32815320 - 32815224
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  32815320 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacagaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 32815224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 38779686 - 38779759
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  38779686 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagatgaagtaaaaaataatgtgagtatg 38779759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 39231670 - 39231743
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  39231670 ttacaaagaaaaaggtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 39231743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 40353393 - 40353320
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  40353393 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaaataaaaaataatgtgagtatg 40353320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 47078170 - 47078266
Alignment:
Q  1 aacaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||| |  |||  ||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  47078170 aacaacttatttgacaaccaaaatttacaaagaaaaa-gtaatattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 47078266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 13163071 - 13162975
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||  ||||||||    
T  13163071 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatatgagtatg 13162975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 19785998 - 19786094
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  19785998 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccagagcaatagagagataaagtaaaaagtaatgtgagtatg 19786094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 39332114 - 39332042
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||    
T  39332114 ttacaaagaaaaaagtggtattggcacggaaatcatagcaatagagagataaagtaaaaagtaatgtgagtat 39332042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 37808706 - 37808779
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||||||||| || ||||||    
T  37808706 ttacaaagaaaaaagtggtattggcacggaaagcataacaatagagagataaagtaaaaaataatgtaagtatg 37808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 41666864 - 41666937
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||| ||| |||||||||    
T  41666864 ttacaaagaaaaaagtaatattggcacggacaccataacaatagagagataaagtaaaaagtaatgtgagtatg 41666937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 13906399 - 13906459
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  13906399 ttacaaagaaaaaagtggtattggcacggaaaccataacaatagagagataaagtaaaaaa 13906459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 39137281 - 39137209
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  39137281 ttacaaagaaaaaagtaatattggtacggaaaccatagcaatatagagataaagttaaaaataatgtgagtat 39137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 21023059 - 21023132
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||  |||||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  21023059 ttacaaagaaaaaagtggtattatcacggaaaccataacaatagagagataaagtaaaaaataatgtgaatatg 21023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 41402637 - 41402577
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||||    
T  41402637 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagacaaagaaaaaaa 41402577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 13729855 - 13729782
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||| ||||| ||||||  | ||||||||||||||||||||||||| |||||||||    
T  13729855 ttacaaagaaaaaattggtatttgcacgaaaaccaacgcaatagagagataaagtaaaaaataatgtgagtatg 13729782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 28036873 - 28036801
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||||||| ||||||||    
T  28036873 ttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtat 28036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 26041262 - 26041320
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||    
T  26041262 ttacaaagaaaa-agtagtattgacacggaaatcatagaaatagagagataaagtaaaaa 26041320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 41026185 - 41026132
Alignment:
Q  27 acaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagta 80  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||| ||||||    
T  41026185 acaaagaaaaaagtggtattggtacggaaaccatagcaatagagagacaaagta 41026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 44184501 - 44184574
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  44184501 ttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 44184574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 29002754 - 29002669
Alignment:
Q  6 cttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 93  Q
    |||||||||| | || || |||||||||||||||| ||||||||||||||||||||  | |  |||||||||||||||| ||| ||||    
T  29002754 cttatttgacaactatattttacaaagaaaaaagttgtattggcacggaaaccataacagt--agagataaagtaaaaagtaatgtga 29002669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 44495048 - 44495112
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||||||||  |||||||||| |||||||| ||||||| |||||||| |||||||||    
T  44495048 aaaaattagtattggcattgaaaccatagcaatagagaaataaagtgaaaaataatgtgagtatg 44495112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 20482617 - 20482583
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||||||||||||||||||||||    
T  20482617 aatagagagataaagtaaaaaataaagtgagtatg 20482583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 39029988 - 39029914
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 98  Q
    ||||||| ||||||  |||||||||| | |||||| ||||||||||||||||| |||||| |||| |||||||||    
T  39029988 ttacaaataaaaaataagtattggcatgaaaaccaaagtaatagagagataaattaaaaacataatgtgagtatg 39029914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 39823937 - 39823868
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagt 95  Q
    ||||||||||||| ||||||||| ||||||||  |||  |||||| |||||||||||||||||| ||||||    
T  39823937 ttacaaagaaaaa-gtagtattgacacggaaattataacaatagaaagataaagtaaaaaataatgtgagt 39823868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 10055574 - 10055647
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| | ||  |||||| || ||||||||||||||||||||||||| |||||||||    
T  10055574 ttacaaagaaaaagttggtatttgtacaaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 10055647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 21822541 - 21822614
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | |||||  |||| ||| || |||||||||||||||||||||||| ||| | |||||||    
T  21822541 ttacaaagaaaaaattggtatttacacgaaaatcaaagtaatagagagataaagtaaaaagtaatgcgagtatg 21822614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 41399105 - 41399178
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||  ||||||  |||| |||||| |  |||||||||||||||||||||||||  ||||||||    
T  41399105 ttacaaagaaaaaataagtatttacacgaaaaccaaaacaatagagagataaagtaaaaaataatatgagtatg 41399178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 43573489 - 43573558
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||| ||||    
T  43573489 aaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatg 43573558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 46653040 - 46653089
Alignment:
Q  36 aaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||| |||||||||||||| |||| ||||||||| |||||||    
T  46653040 aaagtagtattgacacggaaaccatagcaataaagagataaaataaaaaa 46653089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 21559910 - 21559854
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  21559910 gtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 21559854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 33180669 - 33180725
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| |||||| |  ||||||||||||||||||||||||| |||||||||    
T  33180669 gtatttgcacgaaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatg 33180725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 35452532 - 35452588
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||||||| || || ||||||||||||||||||||||| | |||||||||    
T  35452532 gtatttgcacggaaatcaaagcaatagagagataaagtaaaaaattatgtgagtatg 35452588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 35588833 - 35588901
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 93  Q
    |||||||||||||  | ||||| ||||| ||| || || ||||||||||||||||||||||||| ||||    
T  35588833 ttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtga 35588901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 11564983 - 11564949
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  11564983 aatagagagataaagtaaaaaataatgtgagtatg 11564949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 18111553 - 18111627
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 98  Q
    ||||||||||||||   | ||||||| | ||| || |||||||||||||||||||||||| |||| |||||||||    
T  18111553 ttacaaagaaaaaataggcattggcaagaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatg 18111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 35600777 - 35600727
Alignment:
Q  49 cacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 98  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  35600777 cacggaaaccaaagtaatagagagaaaaagtaaaaaaataatgtgagtatg 35600727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 40231687 - 40231721
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  40231687 aatagagagataaagtaaaaaataatgtgagtatg 40231721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 46532592 - 46532558
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  46532592 aatagagagataaagtaaaaaataatgtgagtatg 46532558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 46725734 - 46725676
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaa 83  Q
    ||||||||||||||  | ||||| || |||||||| ||||||| |||||||||||||||    
T  46725734 ttacaaagaaaaaataaatattgacaaggaaaccaaagtaataaagagataaagtaaaa 46725676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 47495060 - 47495026
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  47495060 aatagagagataaagtaaaaaataatgtgagtatg 47495026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 11352916 - 11352989
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | |||||  |||| |||||| || |||| |||||||||||||||| ||| |||||||||    
T  11352916 ttacaaagaaaaatttggtatttacacgaaaaccaaagcaataaagagataaagtaaaaagtaatgtgagtatg 11352989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 31844586 - 31844619
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||||||||||||||||||| ||||||||    
T  31844586 aatagagagataaagtaaaaaataatgtgagtat 31844619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 46773583 - 46773648
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaata 67  Q
    |||||||||||||| |  | || ||| |||||||||| | ||||||||||||||||||||| ||||    
T  46773583 acaacttatttgacaaccatattttataaagaaaaaattggtattggcacggaaaccatagcaata 46773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 3062459 - 3062387
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||||||||   ||||| ||||  |||||| |  ||||||||||||||||||||| ||| ||||||||    
T  3062459 ttacaaagaaaaaataggtatttgcacaaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtat 3062387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 12645852 - 12645920
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 93  Q
    |||||||||||||  |  |||| ||||| ||| || || ||||||||||||||||||||||||| ||||    
T  12645852 ttacaaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtga 12645920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 16980425 - 16980354
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||| | ||||| || || |||||| || | ||||||||||||||||||| ||| ||||||||    
T  16980425 ttacaaagaaaaaattggtatttgcccgaaaaccaaagca-tagagagataaagtaaaaagtaatgtgagtat 16980354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 36019528 - 36019473
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| ||| |||||||||| |||| |||||||||||| ||||||| |||||||||    
T  36019528 gtattgacacagaaaccatagcaatatagagataaagta-aaaataatgtgagtatg 36019473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 45529167 - 45529261
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  45529167 aacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 45529261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 1633832 - 1633905
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  1633832 ttacaaagaaaaaagtggtattggcacagaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 1633905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 16966914 - 16966841
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  16966914 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtagaaaataatgtgagtatg 16966841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 7955926 - 7956022
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  7955926 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcgcggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 7956022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 11017957 - 11017861
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | || || |||||||||||||||| ||||||||| |||||| |||  ||||||||||||||||||||||||| |||||||||    
T  11017957 acaacttatttgacaactatattttacaaagaaaaaagtggtattggcatggaaacgataacaatagagagataaagtaaaaaataatgtgagtatg 11017861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 7478908 - 7478836
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  7478908 ttacaaagaaaaa-gtagtattggcacggaaaccatagcaatagagagataaggtaaaaaataatgtgagtatg 7478836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 11657920 - 11658015
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || | || |||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  11657920 acaacttatttgacaatcatattttacaaagaaaaaagtggt-ttggcacggaaaccataataatagagagataaaataaaaagtaatgtgagtatg 11658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 36110290 - 36110194
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||| ||| |||||||||    
T  36110290 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 36110194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 32843884 - 32843943
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  32843884 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaa 32843943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 7586082 - 7586177
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | || |  ||||||||||||| |||| ||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||    
T  7586082 acaacttatttgacaactataatttacaaagaaaaa-gtagcattggcacggaaaacatatcaatagagagataaagtaaaaaataatgtgagtatg 7586177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 13971254 - 13971182
Alignment:
Q  24 attacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 96  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  ||| ||| |||||||    
T  13971254 attacaaagaaaaaagtagtattggcacggaaaccatagcaatatagagataaagttcaaactaatgtgagta 13971182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 36531740 - 36531651
Alignment:
Q  8 tatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||| || |||  ||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||  ||||||||    
T  36531740 tatttgacaatcaaaatttacaaagaaaaa-gtagtattggcacggaaatcataacaatagagagataaagtaaaaaataatatgagtatg 36531651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 30135957 - 30136030
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||||| ||| |||| ||||    
T  30135957 ttacaaagaaagaagtggtattgacacggaaaccatagtaataaagagataaagtaaaaagtaatgtgaatatg 30136030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 35564418 - 35564345
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||||||| ||||  |||| |||||| |||||||||||||||||| |||||||||    
T  35564418 ttacaaagaaaaaagtggtattggcacagaaattatagcaatagatagataaagtaaaaaataatgtgagtatg 35564345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 40739855 - 40739927
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  40739855 ttacaaagaaaaaa-tggtattggcacggaaaccataacaatagagagataaagtaaaaaataatgtgaatatg 40739927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 1871557 - 1871629
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| || ||||| ||||||||||||||  |||||||||||||||| |||||||| |||||||||    
T  1871557 ttacaaagaaaaa-gttgtattcgcacggaaaccataacaatagagagataaagtgaaaaataatgtgagtatg 1871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 30439448 - 30439521
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||  |||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  30439448 ttacaaagaaaaaatgagtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 30439521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 41159831 - 41159904
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   ||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  41159831 ttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 41159904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 41521097 - 41521024
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| ||| |||||| ||| |||||||||| ||||  ||||||||||||||||||| |||||||||    
T  41521097 ttacaaagaaaatagtggtattgacacagaaaccatagcaataacgagataaagtaaaaaataatgtgagtatg 41521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 7592961 - 7592905
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  7592961 gtattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgactatg 7592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 37783890 - 37783986
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || ||||||||||||| || |||||| |||||||| | ||| ||||||||||||||||||||| |||  ||||||||    
T  37783890 acaacttatttgacaaccatattttacaaagaaaaaggtggtattgacacggaaatcctagcaatagagagataaagtaaaaagtaatctgagtatg 37783986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 38234119 - 38234063
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  38234119 gtatttgcacggaaaccaaagtaatagagagataaagtaaaaaattatgtgagtatg 38234063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 33589190 - 33589245
Alignment:
Q  43 tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||    
T  33589190 tattggcacggaaaccataacaatggagagataaagtaaaaaataatgtgagtatg 33589245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 4994502 - 4994437
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||| |||||||||||| |  ||||||||||||||||||||||||| |||||||||    
T  4994502 aaaaagtagatatttgcacggaaaccaaatcaatagagagataaagtaaaaaataatgtgagtatg 4994437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 32847628 - 32847701
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagt-aaaaaataaagtgagtat 97  Q
    |||||||||||||||| |||||| ||||||||||| |  |||||||| ||||||| ||||||||| ||||||||    
T  32847628 ttacaaagaaaaaagtggtattgccacggaaaccacaacaatagagaaataaagtaaaaaaataatgtgagtat 32847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 34591393 - 34591340
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaag 78  Q
    |||||||||||||||| |||||| |||||||||||||| |||| ||||||||||    
T  34591393 ttacaaagaaaaaagtggtattgacacggaaaccatagcaataaagagataaag 34591340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 6968182 - 6968248
Alignment:
Q  33 aaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa-taaagtgagtatg 98  Q
    |||||||||||||||  ||||||||||||  |||||| ||||||||||||||| ||| |||||||||    
T  6968182 aaaaaagtagtattgatacggaaaccataacaatagacagataaagtaaaaaagtaatgtgagtatg 6968248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 2733108 - 2733044
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||| |||||||||||| | |||||||||||||||||| ||||||| |||||||||    
T  2733108 aaaaagtaggtatttgcacggaaaccaaaataatagagagataaagta-aaaataatgtgagtatg 2733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 36568058 - 36568014
Alignment:
Q  54 aaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| || ||||||||||||||||||||||||| |||||||||    
T  36568058 aaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 36568014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 8645293 - 8645234
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    ||||||||||||||  |||||| ||| |||||||| |  |||||||||||||||||||||    
T  8645293 ttacaaagaaaaaataagtatttgcatggaaaccaaaacaatagagagataaagtaaaaa 8645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 39543465 - 39543520
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagta 80  Q
    ||||||||||||||  |||||| ||||||||| || || |||||||||||||||||    
T  39543465 ttacaaagaaaaaataagtatttgcacggaaaacaaagcaatagagagataaagta 39543520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 42110102 - 42110196
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||| ||||||| | |  |||||||||||||  ||||||| | | |||||||| |  |||||||| |||||||||||||| ||||||||||    
T  42110102 acaacttatgtgacgatcataatttacaaagaaaaagttagtatttgtatggaaaccaaaacaatagagaaataaagtaaaaaat-aagtgagtat 42110196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 9549180 - 9549214
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  9549180 aatagagagataaagtaaaaaataatgtgagtatg 9549214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 16613724 - 16613690
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  16613724 aatagagagataaagtaaaaaataatgtgagtatg 16613690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 34718205 - 34718171
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  34718205 aatagagagataaagtaaaaaataatgtgagtatg 34718171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 1366718 - 1366657
Alignment:
Q  36 aaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||| ||||||  ||||||| ||||| |||| ||||||||||||||||||||  |||||||    
T  1366718 aaagtggtattgatacggaaatcatagcaataaagagataaagtaaaaaataatttgagtat 1366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 16872098 - 16872171
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  |  |||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  16872098 ttacaaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 16872171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 31597077 - 31597004
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||  |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  31597077 ttacaaagaaaaagttggtatttgcacaaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 31597004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 5277663 - 5277719
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| ||| || || |||||||||||||| |||||||||| |||||||||    
T  5277663 gtatttgcacgaaaatcaaagcaatagagagataaaataaaaaataatgtgagtatg 5277719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 6991779 - 6991823
Alignment:
Q  54 aaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| || || |||||||||||||||||||||| |||||||||    
T  6991779 aaaccaaagcaaaagagagataaagtaaaaaataatgtgagtatg 6991823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 7472985 - 7473041
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| |||| | || ||||||||||||||||||||| ||| |||||||||    
T  7472985 gtatttgcacgaaaactaaagcaatagagagataaagtaaaaagtaatgtgagtatg 7473041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 16327123 - 16327167
Alignment:
Q  54 aaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| | |||||||||||||||||||||| ||| |||||||||    
T  16327123 aaaccaaaataatagagagataaagtaaaaagtaatgtgagtatg 16327167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 44677426 - 44677499
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  44677426 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 44677499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 390961 - 390865
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || | || |||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  390961 acaacttatttgacaatcatattttacaaagaaaaaagtggtattgacacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 390865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 37508417 - 37508513
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  37508417 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 37508513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 10206892 - 10206988
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||| |||||||||    
T  10206892 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaacagagagataaagtaaaaagtaatgtgagtatg 10206988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 32767805 - 32767732
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  32767805 ttacaaagaaaaaagtggcattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 32767732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 33375989 - 33375916
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  33375989 ttacaaagataaaagtggtattggcacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 33375916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 39020101 - 39020174
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  39020101 ttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 39020174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 49417703 - 49417631
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  49417703 ttacaaagaaaaa-gtagtattggcacggaaaccatagcaatagagagataaaataaaaaataatgtgagtatg 49417631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 30909181 - 30909090
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 93  Q
    |||||||||||||| || | || |||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||| ||| ||||    
T  30909181 acaacttatttgacaatcatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgtga 30909090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 49363175 - 49363266
Alignment:
Q  7 ttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| | || || ||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||    
T  49363175 ttatttgacaactatattttataaagaaaaaagtggtattggcacggaaaccatatcaatagagagataaagtaaaaagtaatgtgagtatg 49363266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 8821759 - 8821686
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||  ||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  8821759 ttacaaagaaaaaagtgatattgacacagaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 8821686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 28419156 - 28419229
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||| || ||||||    
T  28419156 ttacaaagaaaaaagtggtattggcatggaaaccataacaatagagagataaagtaaaaaataatgtaagtatg 28419229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 43905123 - 43905029
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |  | || |||||||||||||||| |||||| ||| |||||||||  ||||||||||||||||||||| ||| |||||||||    
T  43905123 aacttatttgacaaccatattttacaaagaaaaaagtggtattgacacagaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 43905029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 11633742 - 11633669
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||    
T  11633742 ttacaaaaagaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgtgaatatg 11633669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 39907488 - 39907561
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||| ||||||||||| ||| |||||||| ||||| |||||||| |||||||||||||||| |||||||||    
T  39907488 ttacaaaaaaaaaagtagtgttgacacggaaatcatagcaatagagaaataaagtaaaaaataatgtgagtatg 39907561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 54028071 - 54027998
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||||||| ||||  ||||||||||||||||||||||||| || ||||||    
T  54028071 ttacaaagaaaaaagtggtattgacacggaaatcataacaatagagagataaagtaaaaaataatgtaagtatg 54027998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 22371319 - 22371247
Alignment:
Q  26 tacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||||||| || ||||||    
T  22371319 tacaaagaaaaaattggtattggcaaagaaaccatagcaatagagagataaagtaaaaaataatgtaagtatg 22371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 39671016 - 39671112
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || ||||||||||||||||  ||||| |||||||| ||||  ||||||||||||||||||||| ||| |||||||||    
T  39671016 acaacttatttgacaaccatattttacaaagaaaaaagtgatattgacacggaaatcataacaatagagagataaagtaaaaagtaatgtgagtatg 39671112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 54773695 - 54773755
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||||| |||||| |||||||||||||| || |||||||||||||||||||    
T  54773695 ttacaaagaaaaaagtggtattgacacggaaaccatagcaagagagagataaagtaaaaaa 54773755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 36121973 - 36121878
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||| |  | || ||||||||||||| || ||||||||||  ||| ||||| ||||||||||||||||||||| ||| ||||||||    
T  36121973 acaacttatttgacaaccatattttacaaagaaaaatgtggtattggcacaaaaatcatagcaatagagagataaagtaaaaagtaacgtgagtat 36121878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 46984582 - 46984647
Alignment:
Q  33 aaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||  ||||||||    
T  46984582 aaaaaagtggtattggcacggaaaccataacaatagagagataaagtagaaaataatatgagtatg 46984647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 54195469 - 54195396
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtat 97  Q
    ||||||||||||||||  ||||| |||| |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  54195469 ttacaaagaaaaaagtgatattgacacgaaaactatagtaatagagagataaagtaaaaaaataatgtgagtat 54195396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 13934545 - 13934607
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||| ||||||||||||||||    
T  13934545 ttacaaagaaaaa-gtattattggcacggaaaccataacaatagagaaataaagtaaaaaataa 13934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 29634014 - 29634077
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    |||||||||||||||| ||||| ||||||||| ||||  ||||||||||||| |||||||||||    
T  29634014 ttacaaagaaaaaagtggtatttgcacggaaatcatatcaatagagagataatgtaaaaaataa 29634077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 21195842 - 21195891
Alignment:
Q  35 aaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  21195842 aaaagtagtattgacacggaaatcatagcaatagagagataaagtaaaaa 21195891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 21196253 - 21196180
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   ||||| ||||| ||| || |||||||||||||||||||||||||||| || ||||||    
T  21196253 ttacaaagaaaaaatatgtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataatgtaagtatg 21196180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 39697164 - 39697237
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  |||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  39697164 ttacaaagaaaaaattgatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 39697237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 52937312 - 52937239
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||| ||||  ||| || |||||||||||||||||||||||| ||| |||||||||    
T  52937312 ttacaaagaaaaaattggtatttgcacaaaaatcaaagtaatagagagataaagtaaaaagtaatgtgagtatg 52937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 55400124 - 55400055
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  55400124 aaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 55400055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 46982822 - 46982918
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| ||||||||| | || || |||||||||||||||| ||||| |||||||||  |||| |||||||| |||||||| ||| |||  ||||||||    
T  46982822 acaatttatttgacaactatattttacaaagaaaaaagtggtattagcacggaaataatagcaatagagatataaagtagaaagtaatatgagtatg 46982918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 50638310 - 50638366
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||||||||| || ||||||||||||||||||||||| | |||||||||    
T  50638310 gtatttgcacggaaaccaaagcaatagagagataaagtaaaaaattatgtgagtatg 50638366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 55013154 - 55013079
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaa 77  Q
    |||| ||||||||| || | || ||||||||||||||||  ||||| |||||||||||||| |||| |||||||||    
T  55013154 acaatttatttgacaatcatattttacaaagaaaaaagtgatattgacacggaaaccatagcaataaagagataaa 55013079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 24095348 - 24095421
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| |||| ||||| |||||| || |||||||| |||||||||||||||| |||||||||    
T  24095348 ttacaaagaaaaa-gtaggtatttgcacgaaaaccaaagcaatagagaaataaagtaaaaaataatgtgagtatg 24095421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 26996435 - 26996372
Alignment:
Q  33 aaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| | |||||| |||||||||||||| ||||||||  ||||||||||||||| |||||||||    
T  26996435 aaaaaaatggtattgacacggaaaccatagcaatagaga--taaagtaaaaaataatgtgagtatg 26996372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 37035491 - 37035541
Alignment:
Q  49 cacggaaaccatagtaatagagagataaagt-aaaaaataaagtgagtatg 98  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  37035491 cacggaaaccaaagtaatagagagataaagtaaaaaaataatgtgagtatg 37035541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 35201459 - 35201531
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagata 75  Q
    |||||||||||||| || | |  |||||||||||| |||||||||| |||| ||||||||| ||||||||||||    
T  35201459 acaacttatttgacaatcataatttacaaagaaaa-agtagtattgacacgaaaaccatagcaatagagagata 35201531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 37927151 - 37927220
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||   ||||| | |||||||||| || ||||||||||||||||||||||| | |||||||||    
T  37927151 aaagaaaaaataggtatttgtacggaaaccaaagcaatagagagataaagtaaaaaattatgtgagtatg 37927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 46253751 - 46253678
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||   | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  46253751 ttacaaagaaaatgttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 46253678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 49761428 - 49761363
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||| ||||  |||||| || ||||||||||||||||||||||||| |||||||||    
T  49761428 aaaaagtaggtatttgcacaaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 49761363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 51973310 - 51973383
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |||||||| ||   ||||||||  |||||||||||||||| |||||||| || ||||||    
T  51973310 ttacaaagaaaaaaatagtattgacataaaaaccataacaatagagagataaagttaaaaataatgtaagtatg 51973383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 52485585 - 52485528
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 98  Q
    ||||||||||| |||||| || ||||||||||||||||||||| |||| |||||||||    
T  52485585 gtattggcacgaaaaccaaagcaatagagagataaagtaaaaatataatgtgagtatg 52485528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 23770705 - 23770758
Alignment:
Q  43 tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||  ||||||||||||    
T  23770705 tattgacacggaaaccaaagtaatagagagagaaagtaaaaa--aaagtgagtatg 23770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 24480393 - 24480463
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagt 95  Q
    ||||||||||||| |||| |||| ||||  |||||| ||||||||| |||||||||||||||||| ||||||    
T  24480393 ttacaaagaaaaa-gtaggtatttgcacaaaaaccaaagtaatagatagataaagtaaaaaataatgtgagt 24480463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 49167871 - 49167821
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    ||||||||||||||  | ||||| ||||| |||||||||||||||||||||    
T  49167871 aaaaagtagtattgatatggaaatcatagcaatagagagataaagtaaaaa 49167821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 8846616 - 8846547
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||  |||||| | || ||||||| |  ||| ||||||||||||||||||||| |||||||||    
T  8846616 aaagaaaaaataagtatttgtacagaaaccaaaacaatggagagataaagtaaaaaataatgtgagtatg 8846547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 20080193 - 20080129
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||| |||||||||||| |  ||||||||||||||||| ||||||| |||||||||    
T  20080193 aaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagta-aaaataatgtgagtatg 20080129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 24482905 - 24482978
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| |  |||| |||||||||||||||| ||| |||||||||    
T  24482905 ttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatatagagataaagtaaaaagtaatgtgagtatg 24482978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 24645485 - 24645412
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   ||| | ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  24645485 ttacaaagaaaaaataggtacttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 24645412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 44813406 - 44813463
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 98  Q
    |||||| |||| |||||| || ||||||||||||||||||||| |||| |||||||||    
T  44813406 gtattgacacgaaaaccaaagcaatagagagataaagtaaaaatataatgtgagtatg 44813463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 46019591 - 46019518
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |   ||||| | ||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  46019591 ttacaaagaaaagataggtatttgtacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 46019518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 50206912 - 50206985
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  |  |||| ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  50206912 ttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 50206985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 51465856 - 51465929
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| ||| || || ||||||||||||||||||||| |||  ||||||||    
T  51465856 ttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatatgagtatg 51465929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 41486062 - 41486158
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  41486062 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 41486158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 30079975 - 30079902
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  30079975 ttacaaagaaaaaagtggtattggcacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 30079902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 36111314 - 36111411
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa-taaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  36111314 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaagtaatgtgagtatg 36111411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 51746372 - 51746277
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||| |  | || ||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  51746372 acaacttatttgacaaacatattttacaaagaaaaaagtgatattggcacggaaaccataacaatagagagataaagtaaaaaataatgtgagtat 51746277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 42959422 - 42959328
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtat 97  Q
    |||||||||||| || | || |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  42959422 aacttatttgacaatcatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaaaataatgtgagtat 42959328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 624254 - 624327
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||    
T  624254 ttacaaagaaaaaagtggtattggcacgaaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 624327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 31076182 - 31076110
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  31076182 ttacaaagaaaaa-gtagtattgacacggaaaccatagtaatagagagataaagtaaaaaatgatgtgagtatg 31076110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 21260450 - 21260354
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| ||||||||| || | || ||||||||||||| || ||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||    
T  21260450 acaatttatttgacaatcatattttacaaagaaaaaggtggtattggcacggaaaccataacaatagagagataaagaaaaaaataatgtgagtatg 21260354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 33899245 - 33899341
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||| | ||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||    
T  33899245 acaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacggaaaccataacaatagagagataaagaaaaaaataatgtgagtatg 33899341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 37066139 - 37066044
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || |||  |||| |||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||    
T  37066139 acaacttatttgacaatcaaaatttactaagaaaaa-gtagtattggcacggaaatcatagcaatggagagataaagtaaaaaataatgtgagtatg 37066044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 6141702 - 6141793
Alignment:
Q  7 ttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||| || |||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||||| | ||| |||||||||    
T  6141702 ttatttgacaattatattttacaaagaaaaaagtggtattggcacggaaatcatagcaataaagagataaagtaaagagtaatgtgagtatg 6141793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 41082468 - 41082374
Alignment:
Q  3 caacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| |  ||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||| |||||||| |||||||||    
T  41082468 caacttatttgacaattataatttacaaagaaaaa-gtagtattgacacgaaaatcatagtaatagagagataaagtgaaaaataatgtgagtatg 41082374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 5932077 - 5932172
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||| | ||||||||||||||||||||| |||||| |||||||| ||||||||| |||||||||    
T  5932077 acaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacggaaaccatagcaatagaaagataaag-aaaaaataatgtgagtatg 5932172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 9118783 - 9118879
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||||||||||||| |||| ||||    
T  9118783 acaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacgaaaatcatagcaatagagagataaagtaaaaaataatgtgattatg 9118879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 14451545 - 14451449
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| |||||| |||| ||||||||  ||||||||||||||||||||| ||| |||||||||    
T  14451545 acaacttatttgacaaccatattttacaaagaaaaaagtggtattgacacgaaaaccataacaatagagagataaagtaaaaactaatgtgagtatg 14451449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 51194421 - 51194325
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||| | | |||||||||    
T  51194421 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtgatgtgagtatg 51194325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 12112756 - 12112693
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    |||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||    
T  12112756 ttacaaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaataa 12112693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 17476028 - 17475946
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||| || | |  ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  17476028 acaacttatttgacaatcataatttacaaagaaaaa-gtagtattgacacggaaaccatagcaatagagagataaagtaaaaaa 17475946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 50272992 - 50273063
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagaga 73  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  50272992 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagaga 50273063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 53152263 - 53152326
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    |||||||||||||||| |||||||||| |||||||||  |||| ||||||||||||||||||||    
T  53152263 ttacaaagaaaaaagtggtattggcacagaaaccataacaatatagagataaagtaaaaaataa 53152326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 25317987 - 25318080
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |  | || |||||||||||||||| |||||| ||||||||||| || |||| ||||||||||||||||||||  ||||||||    
T  25317987 aacttatttgacaaccatattttacaaagaaaaaagtggtattgacacggaaacca-agcaataaagagataaagtaaaaaataatatgagtatg 25318080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 30169970 - 30170035
Alignment:
Q  33 aaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| ||||||||||| | | ||||||||| ||||||||||||||||||||||||| |||||||||    
T  30169970 aaaagagtagtattggtatgaaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 30170035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 39344922 - 39344995
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  39344922 ttacaaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 39344995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 47965889 - 47965795
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||| ||||||||  |||  |||||||||||||||| ||| |||||||||    
T  47965889 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccatatcaat--agagataaagtaaaaagtaatgtgagtatg 47965795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 54669526 - 54669598
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |||||||||| |||||||||| ||| |||||||||||||||| |||||||| || ||||||    
T  54669526 ttacaaagaaaa-agtagtattgacacggaaaccgtagcaatagagagataaagtgaaaaataatgtaagtatg 54669598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 26206896 - 26206992
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||| || ||| |||||||||  ||||||||||||||||||||| ||| |||| ||||    
T  26206896 acaacttatttgacaaccatattttacaaagaaaaaagtggtactgacacagaaaccataacaatagagagataaagtaaaaagtaatgtgaatatg 26206992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 28657400 - 28657456
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  28657400 gtatttgcacggaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 28657456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 35820321 - 35820241
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||||| | || |  |||||||||||||||| ||||||| ||||||| |||| ||||||||||| ||||||||||    
T  35820321 aacttatttgacaactatagtttacaaagaaaaaagtggtattggtacggaaatcataataatagagagaaaaagtaaaaa 35820241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 48335679 - 48335610
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||||||||| |||| |||| |||| | |||||||||||||||||| |||| ||||    
T  48335679 aaagaaaaaagtaatattggcacgaaaactatagcaatataaagataaagtaaaaaataatgtgaatatg 48335610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 48536426 - 48536366
Alignment:
Q  26 tacaaagaaaaaagtagtattggcacggaaaccatagtaataga--gagataaagtaaaaa 84  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||  |||||||||||||||    
T  48536426 tacaaagaaaaaaatagtattgacacggaaaccataataatagagagagataaagtaaaaa 48536366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 2256281 - 2256333
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaat 86  Q
    ||||||||||||||  ||||||| ||||| |||||||||||||||||||||||    
T  2256281 aaaaagtagtattgaaacggaaatcatagcaatagagagataaagtaaaaaat 2256333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 6494848 - 6494898
Alignment:
Q  38 agtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    |||||||||| |||||||||||||  |||||||| ||||||||||||||||    
T  6494848 agtagtattgacacggaaaccataacaatagagaaataaagtaaaaaataa 6494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 28458319 - 28458392
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| ||||| |||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  28458319 ttacaaagaaaaa-gtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 28458392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 47099149 - 47099078
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| | ||||||| |||||  ||||| || ||||||||||||||||||||| ||| |||||||||    
T  47099149 ttacaaagaaaatattagtatttgcacg--aaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 47099078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 439202 - 439275
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||| | | ||||| ||||| ||||| || |||||||||||| ||| |||||||||    
T  439202 ttacaaagaaaaaagtggtatttgtatggaaatcatagcaatagggaaataaagtaaaaactaatgtgagtatg 439275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 2999241 - 2999168
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||| | |||||| || ||||||||||||||||||||||||| |||| ||||    
T  2999241 ttacaaagaaaaagttggtatttgcatgaaaaccaaagcaatagagagataaagtaaaaaataatgtgaatatg 2999168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 13263378 - 13263411
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||||||||||||||||||||||||||||    
T  13263378 aatagagagataaagtaaaaaataaagtgagtat 13263411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 14010064 - 14010133
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| | ||||| ||||| |||||| | |||||||||||||||||||||| |||  ||||||||    
T  14010064 aaagaaaaaattggtatttgcacgaaaaccaaaataatagagagataaagtaaaaagtaatatgagtatg 14010133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 26718497 - 26718424
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||  ||| || |||||||||||||||||||||||| ||| |||||||||    
T  26718497 ttacaaagaaaaagttggtatttgcacaaaaaacaaagtaatagagagataaagtaaaaagtaatgtgagtatg 26718424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 26731125 - 26731052
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||  ||| || |||||||||||||||||||||||| ||| |||||||||    
T  26731125 ttacaaagaaaaagttggtatttgcacaaaaaacaaagtaatagagagataaagtaaaaagtaatgtgagtatg 26731052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 46405916 - 46405989
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  46405916 ttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaattaatgtgagtatg 46405989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 49896608 - 49896681
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | |||||| |||| ||| || || ||||||||||||||||||||||||| |||| ||||    
T  49896608 ttacaaagaaaaagttggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgactatg 49896681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 27326694 - 27326765
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 96  Q
    |||||||||||||  | ||||| ||||| |||||| || |||||||| |||||||||||| ||| |||||||    
T  27326694 ttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagaaataaagtaaaaagtaatgtgagta 27326765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 33860775 - 33860716
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||||||   |||||| |||||||||||| |  |||||||||||||||||||||    
T  33860775 ttacaaagaaaaagtaagtatttgcacggaaaccaaaacaatagagagataaagtaaaaa 33860716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 21617273 - 21617239
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  21617273 aatagagagataaagtaaaaaataatgtgagtatg 21617239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 51573577 - 51573647
Alignment:
Q  28 caaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||   ||||| | ||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  51573577 caaagaaaaaataggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 51573647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 13086151 - 13086078
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| ||| || || |||||||||||||| |||||| ||| |||||||||    
T  13086151 ttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaaataaaaagtaatgtgagtatg 13086078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 22819778 - 22819705
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| ||| || || |||| |||||||||||||||| ||| |||||||||    
T  22819778 ttacaaagaaaaagttggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaagtaatgtgagtatg 22819705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 31657751 - 31657702
Alignment:
Q  49 cacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  31657751 cacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 31657702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 41389815 - 41389887
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| ||||||||||||||  ||| ||||| |||| || ||||||| |||||||||  ||||||||    
T  41389815 ttacaaagaaaa-agtagtattggcacaaaaatcatagcaataaagtgataaagaaaaaaataatttgagtatg 41389887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 34995433 - 34995377
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtat 97  Q
    |||||| ||||||||||| ||||||||||||  |||||||||| |||| ||||||||    
T  34995433 gtattgacacggaaaccaaagtaatagagagtgaaagtaaaaacataaggtgagtat 34995377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 51852196 - 51852132
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| |||||||| ||||  |||||| |  ||||||||||||||||||||||||| |||| ||||    
T  51852196 aaaatgtagtatttgcacaaaaaccaaaacaatagagagataaagtaaaaaataatgtgaatatg 51852132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 55601672 - 55601716
Alignment:
Q  54 aaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||    
T  55601672 aaaccatagcaatagagagatatagtaaaatataatgtgagtatg 55601716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 11547471 - 11547544
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  11547471 ttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 11547544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 2075393 - 2075466
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||||| |||||||||    
T  2075393 ttacaaagaaaaaagtggtattggcacggaaactataacaatagagagataaagtaaaaaataatgtgagtatg 2075466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 3610903 - 3610976
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  3610903 ttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 3610976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 34504172 - 34504076
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || | || |||||||||||||| | |||||| |||||||||||||| |||||||||||||||| |||| ||| |||||||||    
T  34504172 acaacttatttgacaatcatattttacaaagaaaaaattggtattgacacggaaaccatagcaatagagagataaagtgaaaagtaatgtgagtatg 34504076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 14986663 - 14986746
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||| || | |  |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  14986663 acaacttatttgacaatcatactttacaaagaaaaaagtggtattggcacggaaaccatagcaataaagagataaagtaaaaaa 14986746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 2777238 - 2777331
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |||| || ||||||||||||||||  |||| ||||||||||||||| ||||||||||| ||||||||| ||| |||||||||    
T  2777238 aacttatttgacaattatattttacaaagaaaaaagtgatattagcacggaaaccatagcaatagagagat-aagtaaaaagtaatgtgagtatg 2777331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 335213 - 335119
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || | |  |||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||||||||  ||||||||    
T  335213 acaacttatttgacaatcataatttacaaagaaaaaagtagtattggcacggaaaccatagcaat--agagataaagttaaaaataatatgagtatg 335119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 30036713 - 30036797
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaat 86  Q
    |||||||||||||| || | |  |||||||||||||| | ||||||||||||||||||||| | |||||||||||||||||||||    
T  30036713 acaacttatttgacaatcatactttacaaagaaaaaaatggtattggcacggaaaccatagcattagagagataaagtaaaaaat 30036797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 13658960 - 13658888
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||||||| ||||||||||||| |||||||||    
T  13658960 ttacaaagaaaaa-gtagtattgacacggaaaccatatcaatagagagatcaagtaaaaaataatgtgagtatg 13658888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 4820382 - 4820307
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagta--atagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||| ||||||||  |  |||||||||||||||||||||||| |||||||||    
T  4820382 ttacaaagaaaaaagtggtattggcacgaaaaccatataacaatagagagataaagtaaaaaataatgtgagtatg 4820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 5327533 - 5327593
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||||| |||||| |||||||||||||| || |||||||||||||||||||    
T  5327533 ttacaaagaaaaaagtggtattgacacggaaaccatagcaagagagagataaagtaaaaaa 5327593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 22341117 - 22341189
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |||||||| |  ||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  22341117 ttacaaagaaaa-agtagtatagagacggaaaccatagcaatagagagataaagtaaaaaatgatgtgagtatg 22341189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 30152472 - 30152545
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||| |||||| | ||||||| ||||||||||||| | ||||||||||||||||||||| | |||||||||    
T  30152472 ttacaaataaaaaaatggtattggtacggaaaccatagcattagagagataaagtaaaaaattatgtgagtatg 30152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 3199080 - 3199016
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |||||||||||||| |||| ||||||||| | |||||||| |||||||||    
T  3199080 aaaaagtagtattgacacggaaaccatagcaatatagagataaaatgaaaaataatgtgagtatg 3199016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 754380 - 754453
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  754380 ttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 754453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 14693194 - 14693266
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||||||| |||| |||| |||||||||||| || || |||||||||||||||||||||| ||||||||    
T  14693194 ttacaaagaaaaa-gtaggtatttgcacggaaaccaaagcaacagagagataaagtaaaaaataatgtgagtat 14693266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 35213503 - 35213576
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  35213503 ttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 35213576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 14699606 - 14699679
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| |||| ||||| |||||| || || |||||||||||||||||||||| |||||||||    
T  14699606 ttacaaagaaaaa-gtaggtatttgcacgaaaaccaaagcaacagagagataaagtaaaaaataatgtgagtatg 14699679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 13143324 - 13143397
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  13143324 ttacaaagaaaaagtttgtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 13143397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 20822827 - 20822883
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  20822827 gtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 20822883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 23628481 - 23628429
Alignment:
Q  33 aaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaa 84  Q
    |||||||||| |||| |||||||||||| | ||||||||||||||||||||||    
T  23628481 aaaaaagtagatatttgcacggaaaccaaaataatagagagataaagtaaaaa 23628429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 32459458 - 32459518
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaa 85  Q
    |||||||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||||    
T  32459458 ttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaa 32459518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 6531163 - 6531198
Alignment:
Q  63 taatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||||||||||||| |||||||||    
T  6531163 taatagagagataaagtaaaaaataatgtgagtatg 6531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 10335656 - 10335606
Alignment:
Q  49 cacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 98  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  10335656 cacggaaaccaaagtaatagagagagaaagtaaaaaaataatgtgagtatg 10335606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 32046788 - 32046754
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  32046788 aatagagagataaagtaaaaaataatgtgagtatg 32046754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 24842488 - 24842424
Alignment:
Q  34 aaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |||| |||||||||||| |  ||||||||||||||||| ||||||| |||||||||    
T  24842488 aaaaagtaggtatttgcacggaaaccaaaaaaatagagagataaagta-aaaataatgtgagtatg 24842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 28041756 - 28041829
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||   |||| | |||||||| ||| || |||||||||||||||| ||||| || |||||||||    
T  28041756 ttacaaagaaaaagtaagtacttgcacggaagccaaagcaatagagagataaagttaaaaacaatgtgagtatg 28041829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 26832758 - 26832702
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| |||||| |  ||||||||||||||||||||||| | |||||||||    
T  26832758 gtatttgcacgaaaaccaaaacaatagagagataaagtaaaaaatgatgtgagtatg 26832702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 756985 - 756912
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  756985 ttacaaagaaaaaaatggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 756912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 1852870 - 1852966
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||    
T  1852870 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagacaaagaaaaaaataatgtgagtatg 1852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 3024669 - 3024765
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| || | || |||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  3024669 acaacttatttgacaatcatattttacaaagaaaaaattgatattggcacggaaaccatagcaatagagagataaagtaaaaaataatatgagtatg 3024765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 3603263 - 3603167
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||    
T  3603263 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaactaaaaagtaatgtgagtatg 3603167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 16987089 - 16986994
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| ||||||  ||||||||||||| ||||||||| |||||||| ||||| |||||| |||||||||||||||||| |||||||||    
T  16987089 acaacttatttgacaattaaaatttacaaagaaaaa-gtagtattgacacggaaatcatagcaatagaaagataaagtaaaaaataatgtgagtatg 16986994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 20565037 - 20565133
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||    
T  20565037 acaacttatttgacaaccatattttacaaagaaaaaagtggtattgccacggaaaccatagtaatagagagataaagtaaagagtaatgtgagtatg 20565133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 21486268 - 21486332
Alignment:
Q  34 aaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21486268 aaaaagtagtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 21486332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 33024490 - 33024586
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || ||||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  33024490 acaacttatttgacaaccatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagagagataaagaaaaaaataatgtgagtatg 33024586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 34008331 - 34008236
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| | ||||  ||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||    
T  34008331 acaacttatttgacaactaaaatttacaaagaaaaa-gtagtattggcatggaaaccatagtaatagtaagataaagtaaaaaataatgtgagtatg 34008236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 47214359 - 47214264
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  |||  ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  47214359 acaacttatttgacaaccaaaatttacaaagaaaaa-gtagtattggcacggaaaccataacaatagagagataaagtaaaaaataatgtgagtatg 47214264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 51286287 - 51286382
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  |||  |||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  51286287 acaacttatttgacaaccaaaatttacaaagaaaa-agtagtattggcacggaaaccatagcaatagagagataaaataaaaaataatgtgagtatg 51286382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 46082045 - 46082136
Alignment:
Q  7 ttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| | || || |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  46082045 ttatttgacaactatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 46082136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 38303609 - 38303703
Alignment:
Q  4 aacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |  | || |||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||    
T  38303609 aacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatggcaatagagagataaagtaaaaaataatgcgagtatg 38303703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 7128247 - 7128174
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||| ||||    
T  7128247 ttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtagaaaataatgtgaatatg 7128174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 8411660 - 8411733
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||    
T  8411660 ttacaaagaaaaaagtggtattggcacggaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatg 8411733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 902786 - 902694
Alignment:
Q  6 cttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| || | || |||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| ||| |||||||||    
T  902786 cttatttgacaatcatattttacaaagaaaaaagtggtattagcacggaaatcatagcaatagagagataaagtaaaaagtaatgtgagtatg 902694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 4514373 - 4514469
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || ||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||||||||| |||| ||||    
T  4514373 acaacttatttgacaaacatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagaaagataaagtaaaaaataatgtgaatatg 4514469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 46172326 - 46172422
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| |||||| || | ||||| |||||||||||||||| ||||||||||| |||| |||| |||||||||||||| |||||||||| |||||||||    
T  46172326 acaatttatttaacaactaaattttacaaagaaaaaagtggtattggcacgaaaactatagcaatagagagataaaataaaaaataatgtgagtatg 46172422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 9008354 - 9008281
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| |||||||||  |||||||| | ||||||||||||||||||||||||| |||||||||    
T  9008354 ttacaaagaaaaaagtggtattggcatagaaaccatggcaatagagagataaagtaaaaaataatgtgagtatg 9008281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 32319252 - 32319324
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  32319252 ttacaaagaaaa-agtagtattgacacggaaaccatagtaatagagagatgaagtgaaaaataatgtgagtatg 32319324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 36673674 - 36673746
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  36673674 ttacaaagaaaa-agtagtattgacacggaaaccatagcaatagagagataaagtaaaaaataacatgagtatg 36673746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 26585821 - 26585893
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||||| |||||| |||||||||||||  ||||||| ||||||||||||||||| ||||||||    
T  26585821 ttacaaagaaaaaagtggtattgacacggaaaccataacaatagagcgataaagtaaaaaataatgtgagtat 26585893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 26837604 - 26837508
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| |||||| ||| ||||| |||| ||||||||||||||||||||| ||| |||||||||    
T  26837604 acaacttatttgacaaccatattttacaaagaaaaaagtggtattgacacagaaactatagcaatagagagataaagtaaaaagtaacgtgagtatg 26837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 51191940 - 51191844
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||| | ||||||||||||||| ||||  ||||||||||||||||||||  ||| |||||||||    
T  51191940 acaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacggaaagcataacaatagagagataaagtaaaatgtaatgtgagtatg 51191844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 36779193 - 36779284
Alignment:
Q  7 ttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| || | || ||||||||||||||||  ||||| |||||||| ||||| ||||||||||||||||||||| ||| || ||||||    
T  36779193 ttatttgacaatcatattttacaaagaaaaaagtgatattgacacggaaatcatagcaatagagagataaagtaaaaagtaatgtaagtatg 36779284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 44632656 - 44632584
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| |||| ||||||| | |||| ||||||||||||||||||||||||| |||||||||    
T  44632656 ttacaaagaaaaa-gtagcattgacacggaatctatagcaatagagagataaagtaaaaaataatgtgagtatg 44632584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 21340646 - 21340578
Alignment:
Q  30 aagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||| |  ||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  21340646 aagaaaaaaatgttattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 21340578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24673218 - 24673132
Alignment:
Q  1 aacaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    ||||||||||||||| |  |||  |||||||||||||| |||||||| ||||||||| | || |||||||||||||| ||||||||||    
T  24673218 aacaacttatttgacaacaaaaatttacaaagaaaaaa-tagtattgacacggaaactagagcaatagagagataaactaaaaaataa 24673132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 29586095 - 29586049
Alignment:
Q  52 ggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  29586095 ggaaaccataataatagagagataaagtaaaaaataatgtgagtatg 29586049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 13489791 - 13489718
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  13489791 ttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 13489718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 50328083 - 50328156
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  50328083 ttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaacgtgagtatg 50328156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 50781516 - 50781585
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||| | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  50781516 aaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 50781585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 52362607 - 52362538
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  52362607 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 52362538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 1790660 - 1790564
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||| |  |||||||||||||||| ||  ||||||| ||||||||||||| |||  ||||||||    
T  1790660 acaacttatttgacaaccatattttacaaagaaaaaaatgatattggcacggaaaccttatcaatagagggataaagtaaaaagtaatttgagtatg 1790564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 34040460 - 34040515
Alignment:
Q  43 tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| ||||| ||| || |||||||||||||||||||||||||||| |||||||||    
T  34040460 tatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataatgtgagtatg 34040515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 50882056 - 50882115
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    ||||||||||  |||||| ||||| ||| || ||||||||||||||||||||||||||||    
T  50882056 aaagaaaaaatgagtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataa 50882115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 32915014 - 32915087
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  32915014 ttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 32915087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 34254293 - 34254366
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| || |||| |||||||||||||||| ||| |||||||||    
T  34254293 ttacaaagaaaaagtttgtatttgcacgaaaaccaaagcaataaagagataaagtaaaaagtaatgtgagtatg 34254366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 40316890 - 40316959
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  40316890 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 40316959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 47721538 - 47721465
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||   ||||||| |||| ||| || || ||||||||||||||||||||||||| |||| ||||    
T  47721538 ttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgaatatg 47721465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 47728530 - 47728457
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||   ||||||| |||| ||| || || ||||||||||||||||||||||||| |||| ||||    
T  47728530 ttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgaatatg 47728457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 3226002 - 3226073
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 96  Q
    ||||||||||||||    |||| | ||| |||||| || ||||||||||||||||||||||||| |||||||    
T  3226002 ttacaaagaaaaaatatatatttgtacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagta 3226073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 46543402 - 46543457
Alignment:
Q  43 tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||| ||||| |||||| || ||||||||||||||||||||||||  |||||||||    
T  46543402 tatttgcacgaaaaccaaagcaatagagagataaagtaaaaaatagtgtgagtatg 46543457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 8200181 - 8200131
Alignment:
Q  48 gcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||| || ||||||| ||||||||||||||||| |||||||||    
T  8200181 gcacgaaaaccaaagcaatagagggataaagtaaaaaataatgtgagtatg 8200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 19969527 - 19969577
Alignment:
Q  48 gcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  19969527 gcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 19969577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 48220125 - 48220159
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  48220125 aatagagagataaagtaaaaaataatgtgagtatg 48220159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 49660285 - 49660235
Alignment:
Q  49 cacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 98  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  49660285 cacggaaaccaaagtaatagagagagaaagtaaaaaaataatgtgagtatg 49660235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 50824870 - 50824797
Alignment:
Q  25 ttacaaagaaaaaagtag-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||| ||||| || | |||||| || |||||||||||||||||||||||||  ||||||||    
T  50824870 ttacaaagaaaaa-gtaggtattgacatgaaaaccaaagcaatagagagataaagtaaaaaataatatgagtatg 50824797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 10889988 - 10890061
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||  ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  10889988 ttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 10890061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 15015527 - 15015454
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| |  |||||||| |||||||||||||||| || ||||||    
T  15015527 ttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatagagatataaagtaaaaaataatgtaagtatg 15015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 33054070 - 33054103
Alignment:
Q  65 atagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||||||||||| |||||||||    
T  33054070 atagagagataaagtaaaaaataatgtgagtatg 33054103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 35136973 - 35136900
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||  ||| || || ||||||||||||||||||||| ||| |||||||||    
T  35136973 ttacaaagaaaaagtttgtatttgcacaaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 35136900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 48624966 - 48624933
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtat 97  Q
    ||||||||||||||||||||||||| ||||||||    
T  48624966 aatagagagataaagtaaaaaataatgtgagtat 48624933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 50242423 - 50242382
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaa 83  Q
    ||||||||||| |||||| ||||||||||||| |||||||||    
T  50242423 gtattggcacgaaaaccaaagtaatagagagagaaagtaaaa 50242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 52714843 - 52714916
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||| | ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  52714843 ttacaaagaaaaagttggtaattgcacgaaaaccaaaacaatagagagataaagtaaaaagtaacgtgagtatg 52714916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 35539215 - 35539278
Alignment:
Q  25 ttacaaagaaaaaagta-gtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 88  Q
    ||||||||||||| ||| ||||| |||||||||||| |  || ||||||||||||||||||||||    
T  35539215 ttacaaagaaaaa-gtatgtatttgcacggaaaccaaaacaacagagagataaagtaaaaaataa 35539278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 35539301 - 35539369
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 93  Q
    |||||||||||||   |||||| |||||||||| | |  |||| |||||||||||||||||||| ||||    
T  35539301 ttacaaagaaaaattaagtatttgcacggaaactaaaacaataaagagataaagtaaaaaataatgtga 35539369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 49241464 - 49241520
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||| ||||| ||||||  | |||||| |||||||||||||||||| |||||||||    
T  49241464 gtatttgcacgaaaaccaatgcaatagacagataaagtaaaaaataatgtgagtatg 49241520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 159 - 63
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||| |  | || |||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||| ||| |||||||||    
T  159 acaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 63  T

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Target: scaffold0449 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 9355 - 9260
Alignment:
Q  2 acaacttatttgacgattaaatattacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 97  Q
    |||||||||||||| |  | || ||| |||||||||||| |||||||||||||||  |||| ||||||||||||||||||||| |||  |||||||    
T  9355 acaacttatttgacaaccatattttataaagaaaaaagtggtattggcacggaaattatagcaatagagagataaagtaaaaagtaatatgagtat 9260  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 122952 - 122887
Alignment:
Q  33 aaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| | ||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||    
T  122952 aaaaaattggtattggcacggaaaccatagcaatagagaaataaagtaaaaaataatgtaagtatg 122887  T

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Target: scaffold0687 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 2309 - 2253
Alignment:
Q  42 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  2309 gtattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgactatg 2253  T

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Target: scaffold0321 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 19765 - 19692
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||||| ||||||  || |||||||||| ||||| ||||||||||||| | ||| |||||||||    
T  19765 ttacaaagaaaaaagtggtattgatacagaaaccatagaaatagggagataaagtaaagagtaatgtgagtatg 19692  T

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Target: scaffold0204 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 23201 - 23132
Alignment:
Q  29 aaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||| |||||||||| |||| |||| |||| | |||||||||||||||||| |||| ||||    
T  23201 aaagaaaaaagtaatattggcacgaaaactatagcaatataaagataaagtaaaaaataatgtgaatatg 23132  T

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Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 38554 - 38481
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    |||||||||||||  | ||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  38554 ttacaaagaaaaagttggtattcgcacgaaaaccaaagcaatagagagataaagtaaaaagtaacgtgagtatg 38481  T

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Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 6963 - 6914
Alignment:
Q  49 cacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||| | ||||||||||| |||||||||||||| |||||||||    
T  6963 cacggaaaccaaattaatagagagagaaagtaaaaaataatgtgagtatg 6914  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 134245 - 134318
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||   |||||| |||| |||||| |  |||| |||||||||||||||||||| |||||||||    
T  134245 ttacaaagaaaaaataggtattgacacgaaaaccaaaacaataaagagataaagtaaaaaataatgtgagtatg 134318  T

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Target: scaffold1956 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 899 - 825
Alignment:
Q  25 ttacaaagaaaaaagtagtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 98  Q
    ||||||||||||||    |||| ||||| |||||| | ||||||||||||||||||| ||||||| |||||||||    
T  899 ttacaaagaaaaaatggatatttgcacgaaaaccaaaataatagagagataaagtaaaaaaataacgtgagtatg 825  T

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Target: scaffold0532 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 11054 - 11020
Alignment:
Q  64 aatagagagataaagtaaaaaataaagtgagtatg 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  11054 aatagagagataaagtaaaaaataatgtgagtatg 11020  T

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