View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11309A_low_356 (Length: 216)
Name: NF11309A_low_356
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11309A_low_356 |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 10567053 - 10566857
Alignment:
| Q |
8 |
caatgagatggacatcaactcggaggttccatgtatggggactgattatttagagttcatgaagacgattagatctattccagaccgtggtgagtttgaa |
107 |
Q |
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| T |
10567053 |
caatgagaaggaaaacaactcggaggttccatgtatggggactgattatttagagttcatgaagacgattagatctattccagaccgtggtgagtttgaa |
10566954 |
T |
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| Q |
108 |
agtcaatatagtgctatctctgagttatatggttgttctggaccctcagtaacatcctcttggcaaaaggaccaaagtaaatttgtagtgatgtcca |
204 |
Q |
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| T |
10566953 |
agtcaatatagtgctatctctgagttatatagttgttctggaccctcagtaacatcctcttggcaaaaggaccaaagtaaatttgtagtgatgtcca |
10566857 |
T |
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