View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11309A_low_368 (Length: 208)
Name: NF11309A_low_368
Description: NF11309A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11309A_low_368 |
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Alignment Details
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 39280726 - 39280891
Alignment:
| Q |
21 |
cacatttccaatctcttcaaaacacaaaccaattccaccacttctccaaaaccaagacagcccagtttctccctctccccaaattctttaattctaacca |
120 |
Q |
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| T |
39280726 |
cacatttccaatctcttcaaaacacaaaccaattccaccacttctccaaaaccaagacagcccagtttctccctctccccaaattcattaactctaacca |
39280825 |
T |
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| Q |
121 |
aaacttcattcatcaccataaccccatcatcttccaccaaatccattatctcaacaaccaccttgt |
186 |
Q |
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| T |
39280826 |
aaacttcattcatcaccataaccccatcatcttccaccaaatccattatctcaacaaccaccttgt |
39280891 |
T |
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