View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11309_low_30 (Length: 264)
Name: NF11309_low_30
Description: NF11309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11309_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 32528247 - 32528489
Alignment:
| Q |
5 |
aagatgacactttctagtactaccaaaactgtctcttagctacttttagtactnnnnnnnntgatttagagagagaaatgtgatctacacaaaagacttg |
104 |
Q |
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| T |
32528247 |
aagatgacactttctagtactaccaaaactgtctcttagctacttttagtactaaaaaaaatgatttagagagagaaatgtgatctacacaaaagacttg |
32528346 |
T |
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| Q |
105 |
aactacatcttaggattgagtgtgacagaaagaaagttaatatgagagtaactctaggaacaaaataaggagagtggagcgagaactttggcgaaaaatg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32528347 |
aactacatcttaggattgagtgtgacagaaagaaagttaatatgagagtaactctaggaacaaaataaggagagtggagcgagaactttggcgaaaaatg |
32528446 |
T |
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| Q |
205 |
agtgaatattactctcattcatagttactttagatttgcttgc |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32528447 |
agtgaatattactctcattcatagttactttagatttgcttgc |
32528489 |
T |
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