View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1130_high_24 (Length: 251)
Name: NF1130_high_24
Description: NF1130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1130_high_24 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 26 - 251
Target Start/End: Original strand, 50117696 - 50117921
Alignment:
| Q |
26 |
atattgatatggaagaggcatatgattggttcatatagaggttttctttaagattttagtgaaaaaagcctagaagtagaaaggagatcagaactttgaa |
125 |
Q |
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| T |
50117696 |
atattgatatggaagaggcatatgattggttcatatagaggttttctttaagattttagtgaaaaaagcctagaagtagaaaggagatcagaactttgaa |
50117795 |
T |
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| Q |
126 |
ttgcttatatgttctatctaaccagttgaataagatagtacaatacaaggggatcatgactagccagtagcgtgaaagtacagtgtgaaggatacaaatg |
225 |
Q |
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| T |
50117796 |
ttgcttatatgttatatctaaccagttgaataagatagtacaatacaaggggatcatgactagccagtagcgtgaaagtacagtgtgaaggatacaaatg |
50117895 |
T |
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| Q |
226 |
gtttccctataactaaaggtttgcat |
251 |
Q |
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|||||||||||||||||||||||||| |
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| T |
50117896 |
gtttccctataactaaaggtttgcat |
50117921 |
T |
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