View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1130_low_1 (Length: 676)
Name: NF1130_low_1
Description: NF1130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1130_low_1 |
 |  |
|
| [»] scaffold0586 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 93 - 661
Target Start/End: Original strand, 15761622 - 15762183
Alignment:
| Q |
93 |
agcaattacaaaaggtccaagactcactataaaccaaaactgatggcagcagaaacaaccaaccgttggcaaatagcagtccaggataaaataaaagcct |
192 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
15761622 |
agcaattacaaaaggtccaagactcacta--aaccaaaactgatggcagcagaaacagccaaccgttagcaaatagcagtccaggataaaataaaagcct |
15761719 |
T |
 |
| Q |
193 |
agaattacaaaaacgcagcaaacnnnnnnnnctagcagtaccaaaacaacctcccacccaatcgtaacaaacaaagcataatttgcacggcttctatatc |
292 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15761720 |
agaactacaaaaacgcagcaaacaaaaaaa-ctagcagtaccaaaacaacctcccacccaaccgtaacaaacaaagcataatttgcacggcttctatatc |
15761818 |
T |
 |
| Q |
293 |
tactatttcaatttgttattttaaatggaagaaaattacagggttgaagtaaagatctataaatcctactcatagaccaaagatattctgttcaatgttg |
392 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
15761819 |
tactatttcaatttgttattttaaatggaagaaaattacagggttgaagtaaagatctataaatcctactcatagaccaaagatattttgttcaatgttg |
15761918 |
T |
 |
| Q |
393 |
agacaaggcaataaacaacaatagcagaaagaaagnnnnnnnnncagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatga |
492 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15761919 |
agacaaggcaataaacaacaatagcag-aagaaa---aaaaaaacagagaaaatataccaatcaccaaatctatgttgagtaatagaagaattgagatga |
15762014 |
T |
 |
| Q |
493 |
aattagatggtactttgaaaagaatagtgaaatcaaaacccaaattagcaaacagttgatgaacatacaaagatcataggatgttttttatatagaagaa |
592 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15762015 |
aattagatggtactttgaaaagaatagtgaaatcaaaacccaaattagcaaatagttgatgaacatacaaagatcatatgatgttttttatatagaagaa |
15762114 |
T |
 |
| Q |
593 |
gatgagtgaaaatgtttagcgggaatcagagaaaaagaatggcgggaatgacaaggataaaaatggtat |
661 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
15762115 |
catgagtgaaaatgtttagtgggaatcagagaaaaagaatggcacgaatgacaaggacaaaaatggtat |
15762183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 127; Significance: 3e-65; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 438 - 659
Target Start/End: Original strand, 5671989 - 5672208
Alignment:
| Q |
438 |
agagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaat |
537 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||||||| | ||| |
|
|
| T |
5671989 |
agagaaattttaccaatcaccaaatctatgttgagtaatggaagaattgagataaaattagatggtaccttgaagagaagagtgaaatcaaaaactcaat |
5672088 |
T |
 |
| Q |
538 |
tagcaaacagttgatgaacatacaaagatcataggatgttttttatatagaagaagatgagtgaaaatgtttagcgggaatcagagaaaaagaatggcgg |
637 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| || | | |||||||||||| || ||| |||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
5672089 |
cagcaagcagttgatgaacacacaaagatcatgggttatcttttatatagaaaaacatgggtgaaaatgtttagcgggaatcagag--aaagaatagcgg |
5672186 |
T |
 |
| Q |
638 |
gaatgacaaggataaaaatggt |
659 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
5672187 |
gaatgacaagggcaaaaatggt |
5672208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 5671293 - 5671388
Alignment:
| Q |
289 |
tatctactatttcaatttgttattttaaatggaagaaaattacagggttgaagtaaagatctataaatcctactcatagaccaaagatattctgtt |
384 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
5671293 |
tatcttctatttcaatttgttattttaaatggaaaaaaattgcagggttgcaggaaagatctataaatcctactcataggccaaagatattttgtt |
5671388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 13755907 - 13755951
Alignment:
| Q |
343 |
aaagatctataaatcctactcatagaccaaagatattctgttcaa |
387 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
13755907 |
aaagatctataaatctcactcatagaccaaagatattatgttcaa |
13755951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 120; Significance: 5e-61; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 438 - 659
Target Start/End: Original strand, 13342432 - 13342652
Alignment:
| Q |
438 |
agagaaattata-ccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaa |
536 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||||||| | || |
|
|
| T |
13342432 |
agagaaattttatccaatcaccaaatctatgttgagtaatggaagaattgagataaaattagatggtaccttgaagagaagagtgaaatcaaaaactcaa |
13342531 |
T |
 |
| Q |
537 |
ttagcaaacagttgatgaacatacaaagatcataggatgttttttatatagaagaagatgagtgaaaatgtttagcgggaatcagagaaaaagaatggcg |
636 |
Q |
| |
|
| ||||| ||||||||||||| ||||||||||| || | | |||||||||||| || ||| |||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
13342532 |
tcagcaagcagttgatgaacacacaaagatcatgggttatcttttatatagaaaaacatgggtgaaaatgtttagcgggaatcagag--aaagaatagcg |
13342629 |
T |
 |
| Q |
637 |
ggaatgacaaggataaaaatggt |
659 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
13342630 |
ggaatgacaagggcaaaaatggt |
13342652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 438 - 659
Target Start/End: Original strand, 13331517 - 13331737
Alignment:
| Q |
438 |
agagaaattata-ccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaa |
536 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||||||| | || |
|
|
| T |
13331517 |
agagaaattttatccaatcaccaaatctatgttgagtaatggaagaattgagataaaattagatggtaccttgaagagaagagtgaaatcaaaaactcaa |
13331616 |
T |
 |
| Q |
537 |
ttagcaaacagttgatgaacatacaaagatcataggatgttttttatatagaagaagatgagtgaaaatgtttagcgggaatcagagaaaaagaatggcg |
636 |
Q |
| |
|
| ||||| ||||||||||||| ||||||||||| || | | |||||||||||| || ||| |||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
13331617 |
tcagcaagcagttgatgaacacacaaagatcatgggttatcttttatatagaaaaacatgggtgaaaatgtttagcgggaatcagag--aaagaatagcg |
13331714 |
T |
 |
| Q |
637 |
ggaatgacaaggataaaaatggt |
659 |
Q |
| |
|
|||||| ||||| ||||||||| |
|
|
| T |
13331715 |
ggaatggcaagggcaaaaatggt |
13331737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 13330846 - 13330941
Alignment:
| Q |
289 |
tatctactatttcaatttgttattttaaatggaagaaaattacagggttgaagtaaagatctataaatcctactcatagaccaaagatattctgtt |
384 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
13330846 |
tatcttctatttcaatttgttattttaaatggaaaaaaattgcagggttgcaggaaagatctataaatcctactcataggccaaagatattttgtt |
13330941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 13341761 - 13341856
Alignment:
| Q |
289 |
tatctactatttcaatttgttattttaaatggaagaaaattacagggttgaagtaaagatctataaatcctactcatagaccaaagatattctgtt |
384 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
13341761 |
tatcttctatttcaatttgttattttaaatggaaaaaaattgcagggttgcaggaaagatctataaatcctactcataggccaaagatattttgtt |
13341856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 557
Target Start/End: Original strand, 33430229 - 33430336
Alignment:
| Q |
451 |
caatcaccaaatctatgttgagtaatggaagaattgagatgaaa-ttagatggtactttgaaaagaatagtgaaa-tcaaaacccaaattagcaaacagt |
548 |
Q |
| |
|
|||||| |||||||| |||||||||||||| ||| | | ||| ||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||| | |
|
|
| T |
33430229 |
caatcatcaaatctacgttgagtaatggaacgattaaaaaaaaaattagatggtaccttgaagagaatagtgaaattcaaaatccaaa-tagcaaacact |
33430327 |
T |
 |
| Q |
549 |
tgatgaaca |
557 |
Q |
| |
|
||||||||| |
|
|
| T |
33430328 |
tgatgaaca |
33430336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 437 - 673
Target Start/End: Complemental strand, 26661646 - 26661410
Alignment:
| Q |
437 |
cagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaa |
536 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |||| ||||||||||||| || || |
|
|
| T |
26661646 |
cagagaattgatatcaatcaccaaatctatgttgagtaatggaagaattatgatgaaattagatgataccttgaacagaagagtgaaatcaaaaacccaa |
26661547 |
T |
 |
| Q |
537 |
ttagcaaacagttgatgaacatacaaagatcataggatgttttttatatagaagaagatgagtgaaaatgtttagcgggaatcagagaaaaagaatggcg |
636 |
Q |
| |
|
|| |||| ||||||||| ||| ||||||||||| || | |||||||| |||| | ||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26661546 |
ttggcaagcagttgatgcacacacaaagatcatgggtttctttttatacagaatatcatgggtgaaaatgtttagcgggaatcagagaaaaagaatagcg |
26661447 |
T |
 |
| Q |
637 |
ggaatgacaaggataaaaatggtatattcttggagat |
673 |
Q |
| |
|
|||||| ||||| || || ||||| || |||||||| |
|
|
| T |
26661446 |
ggaatggcaagggtagaagaggtattttgttggagat |
26661410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 451 - 557
Target Start/End: Complemental strand, 6050037 - 6049931
Alignment:
| Q |
451 |
caatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaattagcaaacagttg |
550 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||| |||||||| ||||| |||| ||||||||| | | ||||| |||||| |||||| |
|
|
| T |
6050037 |
caatcaccaaatctatgttgagtaatggaagaattgaaaagaaatttgatggtaccttgaagagaagagtgaaatccagaaccaaaatagcaagcagttg |
6049938 |
T |
 |
| Q |
551 |
atgaaca |
557 |
Q |
| |
|
||||||| |
|
|
| T |
6049937 |
atgaaca |
6049931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 437 - 673
Target Start/End: Complemental strand, 21481564 - 21481328
Alignment:
| Q |
437 |
cagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaa |
536 |
Q |
| |
|
||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |||| ||||||||||||| || || |
|
|
| T |
21481564 |
cagagaattgatatcaatcaccaaatctatgttgagtaatggaagaattatgatgaaattagatgttaccttgaatagaagagtgaaatcaaaaacccaa |
21481465 |
T |
 |
| Q |
537 |
ttagcaaacagttgatgaacatacaaagatcataggatgttttttatatagaagaagatgagtgaaaatgtttagcgggaatcagagaaaaagaatggcg |
636 |
Q |
| |
|
|| |||| |||||||| ||| ||||||||||| || | |||||||| |||| | ||| ||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21481464 |
ttggcaagtagttgatgcacacacaaagatcatgggtttctttttatacagaatatcatgggtgaaaatgtttagcgggaatcagagaaaaagaatagca |
21481365 |
T |
 |
| Q |
637 |
ggaatgacaaggataaaaatggtatattcttggagat |
673 |
Q |
| |
|
|||||| ||||| || || ||||| || |||||||| |
|
|
| T |
21481364 |
ggaatggcaagggtagaagaggtattttgttggagat |
21481328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 437 - 569
Target Start/End: Complemental strand, 19701298 - 19701165
Alignment:
| Q |
437 |
cagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatc-aaaacccaa |
535 |
Q |
| |
|
||||||||| ||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||| ||||||||| ||||| ||| |
|
|
| T |
19701298 |
cagagaaatgatataaatcaacaaatctatgttgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaaaagtgaaatccaaaactcaa |
19701199 |
T |
 |
| Q |
536 |
attagcaaacagttgatgaaca-tacaaagatcat |
569 |
Q |
| |
|
|| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
19701198 |
at-agcaagcagttgatgaacactacaaagatcat |
19701165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 437 - 566
Target Start/End: Original strand, 32717808 - 32717938
Alignment:
| Q |
437 |
cagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaat-caaaacccaa |
535 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||| |||||||| |||||| ||| |
|
|
| T |
32717808 |
cagagaaatgatataaatcaccaaatctatgttgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaa |
32717907 |
T |
 |
| Q |
536 |
attagcaaacagttgatgaaca-tacaaagat |
566 |
Q |
| |
|
| ||||| ||||||||||||| ||||||||| |
|
|
| T |
32717908 |
a-cagcaagcagttgatgaacactacaaagat |
32717938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 437 - 566
Target Start/End: Complemental strand, 10637786 - 10637656
Alignment:
| Q |
437 |
cagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaat-caaaacccaa |
535 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||| ||| ||||| |||| |||||||| |||||| ||| |
|
|
| T |
10637786 |
cagagaaatgatataaatcaccaaatctatgttgagtaatggaagaattaaaatgaaattagatgataccttgaagagaagagtgaaatccaaaactcaa |
10637687 |
T |
 |
| Q |
536 |
attagcaaacagttgatgaaca-tacaaagat |
566 |
Q |
| |
|
| ||||| ||||||||||||| ||||||||| |
|
|
| T |
10637686 |
a-cagcaagcagttgatgaacactacaaagat |
10637656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0586 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0586
Description:
Target: scaffold0586; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 437 - 569
Target Start/End: Complemental strand, 9731 - 9598
Alignment:
| Q |
437 |
cagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaat-caaaacccaa |
535 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||| |||||||| |||||| ||| |
|
|
| T |
9731 |
cagagaaatgatataaatcaccaaatctatgttgagtaatggaagaattaaaatgaaattagatggtaccttgaagagaagagtgaaatccaaaactcaa |
9632 |
T |
 |
| Q |
536 |
attagcaaacagttgatgaaca-tacaaagatcat |
569 |
Q |
| |
|
| | ||| ||||||||||||| |||||||||||| |
|
|
| T |
9631 |
a-caacaagcagttgatgaacactacaaagatcat |
9598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 437 - 569
Target Start/End: Complemental strand, 22893941 - 22893808
Alignment:
| Q |
437 |
cagagaaattataccaatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaat-caaaacccaa |
535 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||| ||| ||||| |||| |||||||| |||||| ||| |
|
|
| T |
22893941 |
cagagaaatgatataaatcaccaaatctatgttgagtaatggaagaattaaaatgaaattagatgttaccttgaagagaagagtgaaatccaaaactcaa |
22893842 |
T |
 |
| Q |
536 |
attagcaaacagttgatgaaca-tacaaagatcat |
569 |
Q |
| |
|
| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
22893841 |
a-cagcaagcagttgatgaacactacaaagatcat |
22893808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 451 - 557
Target Start/End: Complemental strand, 44306253 - 44306148
Alignment:
| Q |
451 |
caatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaattagcaaacagttg |
550 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| | | |||| |||||||| ||||| |||| ||||||||| | | ||||| |||||| |||||| |
|
|
| T |
44306253 |
caatgaccaaatctatgttgagtaatggaagaattgaaaag-aatttgatggtaccttgaagagaagagtgaaatccagaaccaaaatagcaagcagttg |
44306155 |
T |
 |
| Q |
551 |
atgaaca |
557 |
Q |
| |
|
||||||| |
|
|
| T |
44306154 |
atgaaca |
44306148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 557
Target Start/End: Original strand, 13893703 - 13893809
Alignment:
| Q |
451 |
caatcaccaaatctatgttgagtaatggaagaattgagatgaaattagatggtactttgaaaagaatagtgaaatcaaaacccaaattagcaaacagttg |
550 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||| |||||||| ||||| |||| ||||||||| | | ||||| || ||| |||||| |
|
|
| T |
13893703 |
caatcaccaaatctatgttgagtaatggaagaattgaaaagaaatttgatggtaccttgaagagaagagtgaaatccagaaccaaaataacaagcagttg |
13893802 |
T |
 |
| Q |
551 |
atgaaca |
557 |
Q |
| |
|
||||||| |
|
|
| T |
13893803 |
atgaaca |
13893809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University