View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1130_low_54 (Length: 211)
Name: NF1130_low_54
Description: NF1130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1130_low_54 |
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Alignment Details
Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 29878508 - 29878645
Alignment:
| Q |
1 |
accaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacatattcatgaggttattccttttcactttcca |
100 |
Q |
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| T |
29878508 |
accaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacataattatgaggttattccttttcac-ttcca |
29878606 |
T |
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| Q |
101 |
atttatttgtttaccttaggctatgtttcatcctttgct |
139 |
Q |
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|||| |||||||||||||||||||||||||| ||||||| |
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| T |
29878607 |
atttttttgtttaccttaggctatgtttcattctttgct |
29878645 |
T |
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