View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11311_high_10 (Length: 213)
Name: NF11311_high_10
Description: NF11311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11311_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 4231572 - 4231751
Alignment:
| Q |
16 |
agaggtagatgaattcaacgctagaatgaggttagactttgagatcactgagctttgtaaggttgcgtatttcctaggcttttaaggttttgagtacatc |
115 |
Q |
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| T |
4231572 |
agaggtagatgaattcaacgctagaatgaggttagactttgagatcactgagctttgtaagcttgcgtatttcctaggcttt-aaggttttgagtacatc |
4231670 |
T |
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| Q |
116 |
acatggcgtgatacttcatcaagctaagtaggaaactgaaattctgaataaattcaatatgatggattgcaattctgcatt |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4231671 |
acatggcgtgatacttcatcaagctaagtaggaaactgaaattctgaataaattcaatatgatggattgcaattctgcatt |
4231751 |
T |
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