View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11311_low_10 (Length: 259)

Name: NF11311_low_10
Description: NF11311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11311_low_10
NF11311_low_10
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-198)||(69835-70032)
[»] scaffold0138 (2 HSPs)
scaffold0138 (4-204)||(20964-21164)
scaffold0138 (4-204)||(33979-34179)
[»] chr5 (22 HSPs)
chr5 (4-204)||(17011595-17011795)
chr5 (5-204)||(29448707-29448906)
chr5 (19-204)||(265905-266090)
chr5 (4-56)||(31456975-31457027)
chr5 (4-86)||(10774649-10774730)
chr5 (18-104)||(20469175-20469261)
chr5 (18-104)||(21617927-21618013)
chr5 (18-72)||(6551289-6551343)
chr5 (136-201)||(17875927-17875993)
chr5 (18-71)||(20566546-20566599)
chr5 (19-56)||(36508633-36508670)
chr5 (99-147)||(20313200-20313248)
chr5 (145-201)||(21504009-21504065)
chr5 (4-52)||(21556934-21556982)
chr5 (18-94)||(25249827-25249903)
chr5 (18-94)||(25313611-25313687)
chr5 (4-56)||(30616629-30616681)
chr5 (136-201)||(31456721-31456787)
chr5 (18-71)||(21300043-21300096)
chr5 (7-57)||(21554291-21554341)
chr5 (23-71)||(7485002-7485050)
chr5 (33-101)||(19921609-19921676)
[»] chr1 (26 HSPs)
chr1 (1-204)||(46197727-46197930)
chr1 (4-204)||(50001343-50001543)
chr1 (6-204)||(29763619-29763817)
chr1 (18-104)||(13302869-13302955)
chr1 (4-56)||(12327728-12327780)
chr1 (4-56)||(51336494-51336546)
chr1 (18-104)||(4595852-4595938)
chr1 (18-116)||(42697739-42697837)
chr1 (18-71)||(42913049-42913102)
chr1 (18-105)||(45755486-45755573)
chr1 (18-84)||(24723350-24723415)
chr1 (136-201)||(44822246-44822312)
chr1 (19-71)||(19676711-19676763)
chr1 (19-71)||(21046049-21046101)
chr1 (18-56)||(7051921-7051959)
chr1 (5-71)||(16058300-16058366)
chr1 (136-201)||(21188149-21188215)
chr1 (18-56)||(51324519-51324557)
chr1 (19-94)||(21708127-21708201)
chr1 (19-94)||(21712670-21712744)
chr1 (18-56)||(21239048-21239086)
chr1 (18-104)||(22350684-22350769)
chr1 (8-49)||(17901783-17901824)
chr1 (19-71)||(20633631-20633683)
chr1 (6-46)||(24007212-24007252)
chr1 (134-189)||(34392648-34392704)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-186)||(4914-5099)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-186)||(4914-5099)
[»] chr2 (41 HSPs)
chr2 (4-204)||(21080954-21081154)
chr2 (4-204)||(21915491-21915691)
chr2 (8-204)||(25184056-25184252)
chr2 (27-204)||(18357975-18358152)
chr2 (18-94)||(14694303-14694379)
chr2 (5-103)||(22501939-22502037)
chr2 (5-103)||(22509873-22509971)
chr2 (18-104)||(25142171-25142257)
chr2 (5-71)||(40912320-40912386)
chr2 (4-56)||(357896-357948)
chr2 (18-94)||(27852645-27852721)
chr2 (134-204)||(12626546-12626617)
chr2 (18-103)||(3539805-3539890)
chr2 (134-201)||(19647104-19647172)
chr2 (18-94)||(24516164-24516239)
chr2 (99-147)||(36734530-36734578)
chr2 (5-44)||(27484475-27484514)
chr2 (5-71)||(17307486-17307552)
chr2 (20-94)||(23068408-23068482)
chr2 (136-201)||(45535796-45535862)
chr2 (18-71)||(19201199-19201252)
chr2 (19-71)||(5031129-5031181)
chr2 (19-71)||(24780840-24780892)
chr2 (18-110)||(25046079-25046171)
chr2 (145-201)||(45535666-45535722)
chr2 (21-56)||(1383545-1383580)
chr2 (19-94)||(2523747-2523821)
chr2 (18-116)||(5986132-5986230)
chr2 (34-84)||(18390229-18390279)
chr2 (136-201)||(24884231-24884297)
chr2 (18-56)||(44072572-44072610)
chr2 (19-71)||(9975929-9975981)
chr2 (19-71)||(22251448-22251500)
chr2 (4-39)||(34858177-34858212)
chr2 (4-39)||(34873239-34873274)
chr2 (4-37)||(34491225-34491258)
chr2 (145-201)||(22501730-22501786)
chr2 (145-201)||(22509664-22509720)
chr2 (19-71)||(24436648-24436700)
chr2 (145-201)||(28652677-28652733)
chr2 (23-71)||(37270699-37270747)
[»] chr7 (51 HSPs)
chr7 (6-204)||(29052169-29052367)
chr7 (18-204)||(32160199-32160385)
chr7 (1-204)||(16549987-16550187)
chr7 (1-204)||(16615475-16615675)
chr7 (18-105)||(14218894-14218981)
chr7 (18-104)||(35771440-35771526)
chr7 (18-125)||(4071767-4071873)
chr7 (18-125)||(15289052-15289158)
chr7 (5-71)||(13147458-13147524)
chr7 (18-84)||(48807324-48807390)
chr7 (5-94)||(12127149-12127237)
chr7 (19-71)||(11067468-11067520)
chr7 (19-71)||(32433589-32433641)
chr7 (18-84)||(12754611-12754676)
chr7 (136-201)||(14274093-14274159)
chr7 (18-72)||(18955329-18955383)
chr7 (5-71)||(44374843-44374909)
chr7 (5-71)||(44383708-44383774)
chr7 (18-56)||(47974819-47974857)
chr7 (19-84)||(16078317-16078382)
chr7 (18-71)||(20586352-20586405)
chr7 (19-71)||(8851159-8851211)
chr7 (19-71)||(12372274-12372326)
chr7 (19-71)||(12465260-12465312)
chr7 (20-92)||(14928290-14928362)
chr7 (20-92)||(15351756-15351828)
chr7 (4-104)||(30820136-30820234)
chr7 (17-104)||(11054681-11054767)
chr7 (18-72)||(4690662-4690716)
chr7 (18-104)||(15095636-15095721)
chr7 (18-104)||(15140181-15140266)
chr7 (19-53)||(16999454-16999488)
chr7 (18-72)||(18990846-18990900)
chr7 (18-71)||(14180397-14180450)
chr7 (19-71)||(12322930-12322982)
chr7 (20-92)||(14259373-14259445)
chr7 (19-71)||(20620286-20620338)
chr7 (173-204)||(1856553-1856584)
chr7 (173-204)||(13917725-13917756)
chr7 (4-39)||(19485958-19485993)
chr7 (173-204)||(25926452-25926483)
chr7 (18-104)||(13698637-13698723)
chr7 (136-201)||(42565948-42566014)
chr7 (19-48)||(19283079-19283108)
chr7 (18-71)||(20214147-20214200)
chr7 (18-71)||(24269946-24269999)
chr7 (19-56)||(33002168-33002205)
chr7 (7-104)||(36685134-36685229)
chr7 (18-71)||(46386087-46386140)
chr7 (23-71)||(10277327-10277375)
chr7 (12-104)||(12557889-12557980)
[»] chr3 (52 HSPs)
chr3 (6-204)||(16979779-16979977)
chr3 (19-204)||(22652640-22652825)
chr3 (4-69)||(36528869-36528934)
chr3 (134-201)||(13522463-13522530)
chr3 (18-94)||(33565064-33565140)
chr3 (4-56)||(15446853-15446905)
chr3 (99-147)||(25202059-25202107)
chr3 (134-204)||(45803451-45803522)
chr3 (18-104)||(13185862-13185948)
chr3 (20-94)||(22758835-22758909)
chr3 (4-65)||(3263948-3264009)
chr3 (19-92)||(11259411-11259483)
chr3 (22-94)||(11885560-11885632)
chr3 (18-94)||(35960927-35961003)
chr3 (99-147)||(48043557-48043605)
chr3 (134-201)||(48631202-48631270)
chr3 (5-104)||(11563692-11563791)
chr3 (4-71)||(24177721-24177788)
chr3 (22-71)||(14508847-14508896)
chr3 (18-71)||(40807996-40808049)
chr3 (18-71)||(44274418-44274471)
chr3 (19-71)||(17044966-17045018)
chr3 (19-71)||(17047126-17047178)
chr3 (19-71)||(17539106-17539158)
chr3 (19-71)||(17541434-17541486)
chr3 (19-71)||(22306583-22306635)
chr3 (23-94)||(17694045-17694115)
chr3 (7-86)||(52988846-52988923)
chr3 (18-56)||(5200242-5200280)
chr3 (18-56)||(9510915-9510953)
chr3 (18-56)||(9518890-9518928)
chr3 (18-72)||(15566743-15566797)
chr3 (18-56)||(16050942-16050980)
chr3 (5-71)||(17518859-17518925)
chr3 (5-71)||(17533721-17533787)
chr3 (20-94)||(18699431-18699505)
chr3 (18-56)||(19568207-19568245)
chr3 (18-56)||(40812848-40812886)
chr3 (18-104)||(42323970-42324056)
chr3 (5-71)||(49900730-49900796)
chr3 (19-56)||(15931508-15931545)
chr3 (173-204)||(5224191-5224222)
chr3 (173-204)||(15465963-15465994)
chr3 (100-147)||(21845732-21845778)
chr3 (173-204)||(26054587-26054618)
chr3 (4-39)||(37641489-37641524)
chr3 (19-94)||(45577655-45577729)
chr3 (4-39)||(52465356-52465391)
chr3 (136-201)||(3160742-3160808)
chr3 (23-71)||(10311527-10311575)
chr3 (134-201)||(12155141-12155209)
chr3 (4-52)||(14967203-14967251)
[»] chr6 (33 HSPs)
chr6 (4-204)||(15900639-15900839)
chr6 (4-204)||(15173438-15173638)
chr6 (79-204)||(15891629-15891754)
chr6 (4-94)||(27329966-27330055)
chr6 (4-94)||(27390706-27390795)
chr6 (18-94)||(18928658-18928734)
chr6 (19-94)||(19655231-19655305)
chr6 (19-86)||(27572122-27572188)
chr6 (18-104)||(15890711-15890796)
chr6 (18-72)||(15998888-15998942)
chr6 (18-103)||(23501641-23501725)
chr6 (18-125)||(31731903-31732009)
chr6 (18-56)||(28948590-28948628)
chr6 (19-56)||(27125477-27125514)
chr6 (19-71)||(7827972-7828024)
chr6 (18-86)||(12041619-12041687)
chr6 (19-71)||(23150287-23150339)
chr6 (20-71)||(24267849-24267900)
chr6 (136-201)||(18585549-18585615)
chr6 (20-94)||(19772667-19772741)
chr6 (19-104)||(19401062-19401146)
chr6 (19-71)||(18703568-18703620)
chr6 (19-71)||(18709503-18709555)
chr6 (7-39)||(20733232-20733264)
chr6 (134-204)||(1818819-1818890)
chr6 (173-204)||(23415773-23415804)
chr6 (7-86)||(27852193-27852270)
chr6 (22-56)||(18585820-18585854)
chr6 (20-94)||(22806716-22806790)
chr6 (4-38)||(28103433-28103467)
chr6 (8-49)||(29045293-29045334)
chr6 (5-49)||(19825472-19825516)
chr6 (134-201)||(29045134-29045202)
[»] scaffold0034 (2 HSPs)
scaffold0034 (6-204)||(29203-29401)
scaffold0034 (20-94)||(120931-121005)
[»] chr4 (33 HSPs)
chr4 (19-204)||(10694245-10694430)
chr4 (4-204)||(40620399-40620599)
chr4 (19-204)||(10908011-10908196)
chr4 (4-204)||(15008835-15009030)
chr4 (18-94)||(9924131-9924207)
chr4 (18-116)||(21151-21249)
chr4 (18-84)||(11478652-11478718)
chr4 (4-56)||(14186973-14187025)
chr4 (18-56)||(2424386-2424424)
chr4 (18-104)||(9870443-9870529)
chr4 (18-56)||(14549775-14549813)
chr4 (18-116)||(21062596-21062694)
chr4 (18-71)||(15115222-15115275)
chr4 (19-71)||(11425943-11425995)
chr4 (19-71)||(19610324-19610376)
chr4 (19-71)||(25091653-25091705)
chr4 (18-94)||(37019648-37019723)
chr4 (19-71)||(53630474-53630526)
chr4 (134-204)||(9622354-9622425)
chr4 (4-86)||(10057648-10057728)
chr4 (18-56)||(19434558-19434596)
chr4 (19-56)||(16998540-16998577)
chr4 (19-56)||(35811376-35811413)
chr4 (19-71)||(10356436-10356488)
chr4 (99-201)||(35660758-35660862)
chr4 (23-71)||(46001535-46001583)
chr4 (18-93)||(15613069-15613143)
chr4 (18-93)||(51993540-51993614)
chr4 (136-201)||(14477502-14477568)
chr4 (23-71)||(6633541-6633589)
chr4 (46-94)||(15011497-15011545)
chr4 (5-49)||(19022366-19022410)
chr4 (19-71)||(42875797-42875849)
[»] chr8 (45 HSPs)
chr8 (4-204)||(23478949-23479149)
chr8 (4-204)||(19880690-19880889)
chr8 (4-204)||(26454573-26454775)
chr8 (5-204)||(16198703-16198902)
chr8 (18-204)||(25657513-25657699)
chr8 (5-158)||(17158949-17159102)
chr8 (18-103)||(36727037-36727122)
chr8 (18-94)||(45469218-45469294)
chr8 (5-104)||(20022026-20022125)
chr8 (134-201)||(20879343-20879411)
chr8 (18-93)||(23899986-23900061)
chr8 (1-49)||(12577901-12577949)
chr8 (19-71)||(20083638-20083690)
chr8 (18-94)||(22254743-22254819)
chr8 (145-204)||(22483647-22483706)
chr8 (18-72)||(4380616-4380670)
chr8 (18-104)||(31722492-31722578)
chr8 (19-72)||(18761447-18761500)
chr8 (18-94)||(17906848-17906923)
chr8 (145-201)||(21676717-21676773)
chr8 (134-204)||(22610380-22610451)
chr8 (18-56)||(5761548-5761586)
chr8 (18-56)||(22532131-22532169)
chr8 (18-56)||(22536816-22536854)
chr8 (18-71)||(6101752-6101805)
chr8 (23-56)||(6573060-6573093)
chr8 (19-72)||(17218701-17218754)
chr8 (18-71)||(20397509-20397562)
chr8 (23-71)||(6202776-6202824)
chr8 (18-110)||(19700122-19700214)
chr8 (18-86)||(23889785-23889852)
chr8 (19-71)||(42817907-42817959)
chr8 (173-204)||(14397063-14397094)
chr8 (18-85)||(23419427-23419494)
chr8 (134-204)||(23884036-23884107)
chr8 (136-201)||(20517172-20517238)
chr8 (18-84)||(22317910-22317975)
chr8 (136-201)||(22344993-22345059)
chr8 (136-201)||(22356653-22356719)
chr8 (18-104)||(23948230-23948316)
chr8 (19-56)||(39936007-39936044)
chr8 (4-49)||(41680118-41680163)
chr8 (19-71)||(19140765-19140816)
chr8 (5-49)||(36306019-36306063)
chr8 (23-71)||(37292705-37292753)
[»] scaffold0436 (1 HSPs)
scaffold0436 (5-204)||(8827-9026)
[»] scaffold0462 (1 HSPs)
scaffold0462 (4-204)||(11090-11290)
[»] scaffold0083 (3 HSPs)
scaffold0083 (5-204)||(1804-2003)
scaffold0083 (18-56)||(5044-5082)
scaffold0083 (18-56)||(10754-10792)
[»] scaffold0046 (1 HSPs)
scaffold0046 (5-204)||(21763-21962)
[»] scaffold0058 (2 HSPs)
scaffold0058 (4-151)||(6288-6435)
scaffold0058 (136-201)||(59771-59837)
[»] scaffold0061 (2 HSPs)
scaffold0061 (100-204)||(14667-14771)
scaffold0061 (100-204)||(23725-23829)
[»] scaffold0004 (2 HSPs)
scaffold0004 (23-104)||(110141-110222)
scaffold0004 (18-52)||(328287-328321)
[»] scaffold0802 (1 HSPs)
scaffold0802 (18-94)||(4708-4784)
[»] scaffold0439 (1 HSPs)
scaffold0439 (134-201)||(12111-12178)
[»] scaffold0113 (1 HSPs)
scaffold0113 (18-204)||(35359-35543)
[»] scaffold0075 (1 HSPs)
scaffold0075 (18-116)||(60850-60948)
[»] scaffold0628 (1 HSPs)
scaffold0628 (5-94)||(1044-1133)
[»] scaffold0220 (1 HSPs)
scaffold0220 (18-94)||(19931-20007)
[»] scaffold0071 (1 HSPs)
scaffold0071 (4-56)||(15287-15339)
[»] scaffold0037 (2 HSPs)
scaffold0037 (18-104)||(112965-113052)
scaffold0037 (17-84)||(117805-117873)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-72)||(61834-61901)
[»] scaffold0205 (2 HSPs)
scaffold0205 (20-94)||(30631-30705)
scaffold0205 (99-204)||(5695-5801)
[»] scaffold0035 (2 HSPs)
scaffold0035 (99-204)||(43866-43972)
scaffold0035 (99-169)||(39174-39245)
[»] scaffold0001 (3 HSPs)
scaffold0001 (18-71)||(77687-77740)
scaffold0001 (19-71)||(31994-32046)
scaffold0001 (19-71)||(37301-37353)
[»] scaffold1941 (1 HSPs)
scaffold1941 (18-94)||(116-191)
[»] scaffold0047 (1 HSPs)
scaffold0047 (19-71)||(79049-79101)
[»] scaffold0632 (1 HSPs)
scaffold0632 (4-71)||(1165-1232)
[»] scaffold0577 (1 HSPs)
scaffold0577 (4-103)||(9029-9126)
[»] scaffold0203 (1 HSPs)
scaffold0203 (5-72)||(17926-17993)
[»] scaffold0819 (1 HSPs)
scaffold0819 (4-86)||(5352-5433)
[»] scaffold0589 (1 HSPs)
scaffold0589 (18-116)||(4340-4438)
[»] scaffold0411 (1 HSPs)
scaffold0411 (18-104)||(13416-13501)
[»] scaffold0334 (1 HSPs)
scaffold0334 (18-56)||(533-571)
[»] scaffold0021 (2 HSPs)
scaffold0021 (136-201)||(16977-17043)
scaffold0021 (136-201)||(26508-26574)
[»] scaffold0008 (1 HSPs)
scaffold0008 (18-104)||(135503-135588)
[»] scaffold0407 (1 HSPs)
scaffold0407 (19-56)||(11274-11311)
[»] scaffold1939 (1 HSPs)
scaffold1939 (134-197)||(1-65)
[»] scaffold1766 (1 HSPs)
scaffold1766 (18-94)||(695-770)
[»] scaffold1633 (1 HSPs)
scaffold1633 (19-71)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (19-71)||(468-520)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-49)||(23556-23604)
[»] scaffold0077 (2 HSPs)
scaffold0077 (19-71)||(34339-34391)
scaffold0077 (18-93)||(5929-6003)
[»] scaffold0036 (1 HSPs)
scaffold0036 (19-71)||(78185-78237)
[»] scaffold0020 (2 HSPs)
scaffold0020 (19-71)||(143611-143663)
scaffold0020 (18-71)||(168998-169051)
[»] scaffold0019 (2 HSPs)
scaffold0019 (19-71)||(24131-24183)
scaffold0019 (20-94)||(30048-30122)
[»] scaffold0086 (1 HSPs)
scaffold0086 (99-169)||(35565-35636)
[»] scaffold0064 (1 HSPs)
scaffold0064 (5-56)||(58761-58812)
[»] scaffold0043 (2 HSPs)
scaffold0043 (19-94)||(27954-28029)
scaffold0043 (19-94)||(42812-42887)
[»] scaffold1256 (1 HSPs)
scaffold1256 (18-72)||(2199-2253)
[»] scaffold0956 (1 HSPs)
scaffold0956 (5-71)||(2555-2621)
[»] scaffold0625 (1 HSPs)
scaffold0625 (18-72)||(5860-5914)
[»] scaffold0285 (1 HSPs)
scaffold0285 (18-56)||(19768-19806)
[»] scaffold0230 (2 HSPs)
scaffold0230 (136-201)||(6910-6976)
scaffold0230 (22-56)||(6688-6722)
[»] scaffold0217 (1 HSPs)
scaffold0217 (136-201)||(28584-28650)
[»] scaffold0213 (1 HSPs)
scaffold0213 (18-72)||(19206-19260)
[»] scaffold0207 (1 HSPs)
scaffold0207 (18-104)||(13391-13476)
[»] scaffold0175 (1 HSPs)
scaffold0175 (18-104)||(8610-8695)
[»] scaffold0156 (1 HSPs)
scaffold0156 (6-104)||(16572-16669)
[»] scaffold0056 (1 HSPs)
scaffold0056 (18-84)||(67108-67174)
[»] scaffold0040 (1 HSPs)
scaffold0040 (18-56)||(106050-106088)
[»] scaffold0601 (1 HSPs)
scaffold0601 (19-56)||(196-233)
[»] scaffold0256 (1 HSPs)
scaffold0256 (17-86)||(1845-1913)
[»] scaffold0241 (1 HSPs)
scaffold0241 (18-71)||(3182-3235)
[»] scaffold0149 (2 HSPs)
scaffold0149 (18-71)||(29572-29625)
scaffold0149 (18-56)||(21626-21664)
[»] scaffold0111 (2 HSPs)
scaffold0111 (22-71)||(5383-5432)
scaffold0111 (20-71)||(12534-12585)
[»] scaffold0737 (1 HSPs)
scaffold0737 (19-71)||(4714-4766)
[»] scaffold0671 (1 HSPs)
scaffold0671 (18-110)||(4901-4993)
[»] scaffold0555 (1 HSPs)
scaffold0555 (147-203)||(8925-8981)
[»] scaffold0251 (1 HSPs)
scaffold0251 (18-94)||(20085-20160)
[»] scaffold0123 (1 HSPs)
scaffold0123 (18-94)||(7254-7330)
[»] scaffold0104 (2 HSPs)
scaffold0104 (6-86)||(14942-15022)
scaffold0104 (6-86)||(16962-17042)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-110)||(398523-398615)
[»] scaffold0695 (1 HSPs)
scaffold0695 (19-94)||(6819-6893)
[»] scaffold0293 (1 HSPs)
scaffold0293 (173-204)||(19452-19483)
[»] scaffold0292 (1 HSPs)
scaffold0292 (20-91)||(7535-7606)
[»] scaffold0200 (1 HSPs)
scaffold0200 (173-204)||(18462-18493)
[»] scaffold0153 (2 HSPs)
scaffold0153 (4-39)||(5329-5364)
scaffold0153 (4-39)||(12349-12384)
[»] scaffold0041 (1 HSPs)
scaffold0041 (24-71)||(5712-5759)
[»] scaffold0516 (1 HSPs)
scaffold0516 (18-56)||(5304-5342)
[»] scaffold0117 (1 HSPs)
scaffold0117 (173-203)||(42541-42571)
[»] scaffold0092 (1 HSPs)
scaffold0092 (136-201)||(38558-38624)
[»] scaffold0065 (1 HSPs)
scaffold0065 (18-116)||(52543-52641)
[»] scaffold0042 (1 HSPs)
scaffold0042 (18-104)||(29355-29441)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-94)||(21672-21746)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-116)||(96354-96451)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-71)||(146723-146776)
[»] scaffold0452 (1 HSPs)
scaffold0452 (46-94)||(12649-12697)
[»] scaffold0151 (1 HSPs)
scaffold0151 (18-94)||(31086-31161)
[»] scaffold0096 (1 HSPs)
scaffold0096 (46-94)||(22075-22123)
[»] scaffold0028 (1 HSPs)
scaffold0028 (20-104)||(3053-3136)


Alignment Details
Target: scaffold0057 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 69835 - 70032
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  69835 actgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 69934  T
Q  101 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  69935 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaa 70032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 181; Significance: 7e-98; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 21164 - 20964
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  21164 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatttt 21065  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  21064 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaac 20965  T
Q  204 a 204  Q
    |    
T  20964 a 20964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 34179 - 33979
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  34179 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatttt 34080  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| | |||||||||||    
T  34079 gatgattagagaaattaggttttggtttggaattgattgttaaacagtaggtaattcaatgaattaacataagaattgaagttcagaccgtagaataaac 33980  T
Q  204 a 204  Q
    |    
T  33979 a 33979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 17011795 - 17011595
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  17011795 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatttt 17011696  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  17011695 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaac 17011596  T
Q  204 a 204  Q
    |    
T  17011595 a 17011595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 29448906 - 29448707
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29448906 ccgatcatcaatactaaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtggtaattttg 29448807  T
Q  105 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  29448806 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataaaca 29448707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 266090 - 265905
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaat 265991  T
Q  119 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  265990 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 265905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 31457027 - 31456975
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31457027 gccgatcatcaatactaaggtaagggtgagactaactttctctaattttaagt 31456975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 10774649 - 10774730
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||  | | |||||||||| |||||||||||||    
T  10774649 gccgatcatcaatactaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacatg 10774730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 20469175 - 20469261
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| |||||||||||||||||||||||| || ||| |||||||| || |||||||| | ||||||| ||| |||||    
T  20469175 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttg 20469261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 21617927 - 21618013
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| |||||||||||||||||||||||| || ||| ||| |||| ||||||||||| | ||||||| ||| |||||    
T  21617927 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttg 21618013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 6551289 - 6551343
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 6551343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 17875993 - 17875927
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  17875993 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 17875927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 20566599 - 20566546
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||||||||||||||||||||||| ||||  | |||||||||||    
T  20566599 ctaaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaa 20566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 36508633 - 36508670
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagt 36508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 20313248 - 20313200
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaattgattgttaaa 147  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  20313248 attttgatgattagagaaattagattttgatttggaattgattgctaaa 20313200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 21504065 - 21504009
Alignment:
Q  145 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||| ||||||||||    
T  21504065 aaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataa 21504009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 21556934 - 21556982
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattct 52  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||    
T  21556934 gccgatcatcaatactaaggtaagggtgagactaaccttcagtaattct 21556982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 25249827 - 25249903
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||  ||||||| |||| ||||| ||||| || |||||||||||| || |||||||||| |||||||    
T  25249827 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggt 25249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 25313611 - 25313687
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||  ||||||| |||| ||||| ||||| || |||||||||||| || |||||||||| |||||||    
T  25313611 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggt 25313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 30616681 - 30616629
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| || |||||||||| |||| |||||||||||||||||||    
T  30616681 gccgatcatcaatattatggtaagggtgggactgactttctctaattctaagt 30616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 31456787 - 31456721
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| ||||||||| || |||||||||||| ||||||| ||||||| ||||||||||    
T  31456787 ttgattgttgaaagtgtaggtaattcaatgaattaacatatgaattgatgttcaggttgtagaataa 31456721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 21300043 - 21300096
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| |||||||||||||||||| |||||  | |||||||||||    
T  21300043 ctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 21554291 - 21554341
Alignment:
Q  7 gatcatcaatactaaggtaagggtgagactaactttctctaattctaagta 57  Q
    ||||||||||||||||||||||||| ||||||| |||  ||||||| ||||    
T  21554291 gatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagta 21554341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 7485050 - 7485002
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 7485002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 19921676 - 19921609
Alignment:
Q  33 gactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatt 101  Q
    ||||| ||||||||||||||||||  | |||||||| ||| ||| ||||||||| ||||||| ||||||    
T  19921676 gactacctttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtaatt 19921609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 46197727 - 46197930
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  46197727 actgtcgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatttaggtggtaat 46197826  T
Q  101 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaata 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46197827 tttgatgattagagaaattatgttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaata 46197926  T
Q  201 aaca 204  Q
    ||||    
T  46197927 aaca 46197930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 50001543 - 50001343
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  50001543 gccgatcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatttt 50001444  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  50001443 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaac 50001344  T
Q  204 a 204  Q
    |    
T  50001343 a 50001343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 29763619 - 29763817
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 105  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  29763619 cgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttga 29763718  T
Q  106 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||||    
T  29763719 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatacaatgaattaacataagaattgaagtttagactgtagaataaaca 29763817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 13302955 - 13302869
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  13302955 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttg 13302869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 12327728 - 12327780
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12327728 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 12327780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 51336546 - 51336494
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51336546 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 51336494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 4595852 - 4595938
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||||||||||||||||||||||||||||   | ||||||||||||  |||||||||| | ||||||| ||| |||||    
T  4595852 ctaaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttg 4595938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 42697837 - 42697739
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||||| || || |||||||||| ||||||| ||| |||||| |||| |||||    
T  42697837 ctaaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaa 42697739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 42913102 - 42913049
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 42913049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 45755573 - 45755486
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 105  Q
    |||||||||||||||||||||| |||| ||||| ||||| || | |||||||||| || |||||||| | ||||||| ||| ||||||    
T  45755573 ctaaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttga 45755486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 24723350 - 24723415
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    |||||||||||||| ||||||||||||||||||||||||  | | |||||| |||||||||||||||    
T  24723350 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctg-aaactgaatttaaca 24723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 44822246 - 44822312
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  44822246 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 44822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19676763 - 19676711
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19676711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21046049 - 21046101
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 21046101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 7051921 - 7051959
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7051921 ctaaggtaagggtgggactaactttctctaattctaagt 7051959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16058300 - 16058366
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  |||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  16058300 ccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaa 16058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 21188149 - 21188215
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  21188149 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 21188215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 51324557 - 51324519
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  51324557 ctaaggtaagggtgagactaactttccctaattctaagt 51324519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 21708201 - 21708127
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||| ||||||| |||  ||||||| |||| | |||||||||||| || |||||||||| |||||||    
T  21708201 taaggtaagggtgggactaaccttcaataattctgagta-tgtaattctgaaaattggatttaacatgttgtaggt 21708127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 21712744 - 21712670
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||| ||||||| |||  ||||||| |||| | |||||||||||| || |||||||||| |||||||    
T  21712744 taaggtaagggtgggactaaccttcaataattctgagta-tgtaattctgaaaattggatttaacatgttgtaggt 21712670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 21239048 - 21239086
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  21239048 ctaaggtatgggtgggactaactttctctaattctaagt 21239086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 22350769 - 22350684
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||| |||  ||||||| |||| | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  22350769 ctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaacaagttgtaggttgtagttttg 22350684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 17901783 - 17901824
Alignment:
Q  8 atcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    |||||| || |||||||||||||||||||| |||||||||||    
T  17901783 atcatctattctaaggtaagggtgagactagctttctctaat 17901824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20633631 - 20633683
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||| |||||||| ||||||||| ||||||||||||||  | |||||||||||    
T  20633631 taagataagggtgggactaacttgctctaattctaagttgtataattctgaaa 20633683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 24007212 - 24007252
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctct 46  Q
    |||||||| ||||||||||||||||| ||||| ||||||||    
T  24007212 cgatcatctatactaaggtaagggtgggactagctttctct 24007252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 34392704 - 34392648
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcag 189  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||    
T  34392704 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcag 34392648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 5099 - 4914
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5099 actgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 5000  T
Q  101 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagtt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4999 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagtt 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 5099 - 4914
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5099 actgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 5000  T
Q  101 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagtt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4999 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagtt 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 21080954 - 21081154
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  21080954 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaagtggtaatttt 21081053  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  21081054 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaacaatgaattaacataagaattgaagttcaggctgtagaataaac 21081153  T
Q  204 a 204  Q
    |    
T  21081154 a 21081154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 21915691 - 21915491
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  21915691 gccgatcatcaatactaaagtaagggtgtgactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatttt 21915592  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  21915591 gatgaatagagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaac 21915492  T
Q  204 a 204  Q
    |    
T  21915491 a 21915491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 25184252 - 25184056
Alignment:
Q  8 atcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  25184252 atcatcaatactaaggtaagggtgagactaactttctctaattctaagtattttaattctgaaaactagatttaacatgttgtaggtggtaattttgatg 25184153  T
Q  108 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  25184152 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataaaca 25184056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 18357975 - 18358152
Alignment:
Q  27 gggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaattaggtttt 126  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaattaggtttt 18358074  T
Q  127 ggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  18358075 ggtttggaattgattgttaaagagtatgtaattcaatgaattaacataagaattgaagttcaggctgtagaataaaca 18358152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 14694379 - 14694303
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||||||    
T  14694379 ctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggt 14694303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 22502037 - 22501939
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||| ||||    
T  22502037 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtgggttgtagtttt 22501939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 22509971 - 22509873
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||| ||||    
T  22509971 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtgggttgtagtttt 22509873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 25142257 - 25142171
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  25142257 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttg 25142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 40912386 - 40912320
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  40912386 ccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40912320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 357948 - 357896
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  357948 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 27852721 - 27852645
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  27852721 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 27852645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 12626546 - 12626617
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||||||| ||||||| |||||||||||||    
T  12626546 aattgattgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataaaca 12626617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 3539890 - 3539805
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||| |||||||||||||||||| |||||  | ||||||||||||  |||||||||| | ||||||| ||| ||||    
T  3539890 ctaaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttt 3539805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 19647172 - 19647104
Alignment:
Q  134 aattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||||| || | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  19647172 aattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataa 19647104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24516239 - 24516164
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 24516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 36734530 - 36734578
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaattgattgttaaa 147  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  36734530 attttgatgattagagaaattagattttgatttggaattgattgttaaa 36734578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 27484475 - 27484514
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttct 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27484475 ccgatcatcaatactaaggtaagggtgagactaactttct 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 17307552 - 17307486
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17307552 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 23068408 - 23068482
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  23068408 aaggtaagggtgagactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 23068482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 45535862 - 45535796
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  45535862 ttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataa 45535796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 19201199 - 19201252
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||| |||||||||||||||||||||||||||||||||  | |||||||||||    
T  19201199 ctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaa 19201252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 5031129 - 5031181
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5031181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24780840 - 24780892
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 25046171 - 25046079
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 110  Q
    |||||||||||||| ||||||| |||| |||||||||||  | ||||||||| || || |||||||||| ||||||  ||| |||||| ||||    
T  25046171 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatt 25046079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 45535722 - 45535666
Alignment:
Q  145 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  45535722 aaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataa 45535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 1383545 - 1383580
Alignment:
Q  21 aggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagt 1383580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 2523747 - 2523821
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||  ||| ||| ||||||||| |||||||    
T  2523747 taaggtaagggtgggactaactttctctaattctaagttgtataattct-taaattgagtttaacatgttgtaggt 2523821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 5986230 - 5986132
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    |||||||||||||| ||| ||| |||| |||||||||||  | |||||||||||| || |||||||| | |||||||  || |||||| |||| |||||    
T  5986230 ctaaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaa 5986132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 18390229 - 18390279
Alignment:
Q  34 actaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    ||||||||||||||||||||||| || ||||||||||||  ||||||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaaca 18390279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 24884297 - 24884231
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| | ||||||||    
T  24884297 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttatagaataa 24884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 44072610 - 44072572
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  44072610 ctaaggtaagggtgagactaactttcactaattctaagt 44072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 9975981 - 9975929
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||  ||||||||||||||||||||||||  | |||||||||||    
T  9975981 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaa 9975929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22251448 - 22251500
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| ||||| |||||||||||||||||  | |||||||||||    
T  22251448 taaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaa 22251500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 34858177 - 34858212
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||| |||||||    
T  34858177 gccgatcatcaatactaaggtaagggtgggactaac 34858212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 34873239 - 34873274
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||| |||||||    
T  34873239 gccgatcatcaatactaaggtaagggtgggactaac 34873274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 34491225 - 34491258
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagacta 37  Q
    |||||||||||||||||||||||||||| |||||    
T  34491225 gccgatcatcaatactaaggtaagggtgggacta 34491258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 22501786 - 22501730
Alignment:
Q  145 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22501786 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22501730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 22509720 - 22509664
Alignment:
Q  145 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22509720 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22509664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24436700 - 24436648
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||| |||||||| ||||||||||||| ||||||||||  | |||||||||||    
T  24436700 taagataagggtgggactaactttctcgaattctaagttgtataattctgaaa 24436648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 28652677 - 28652733
Alignment:
Q  145 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||||||||||| ||||||||  ||| |||||| |||||||  |||||||||    
T  28652677 aaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataa 28652733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 37270747 - 37270699
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 37270699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 3e-94; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 29052169 - 29052367
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 105  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  29052169 cgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttga 29052268  T
Q  106 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  29052269 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggctgtagaataaaca 29052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 32160199 - 32160385
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  32160199 ctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtgataattttgatgattagagaaa 32160298  T
Q  118 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32160299 ttaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaaca 32160385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 16549987 - 16550187
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16549987 actgccgatcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaat 16550086  T
Q  101 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaata 200  Q
    ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  16550087 tttgat---tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaata 16550183  T
Q  201 aaca 204  Q
    ||||    
T  16550184 aaca 16550187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 16615675 - 16615475
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16615675 actgccgatcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaat 16615576  T
Q  101 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaata 200  Q
    ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  16615575 tttgat---tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaata 16615479  T
Q  201 aaca 204  Q
    ||||    
T  16615478 aaca 16615475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 14218894 - 14218981
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 105  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| ||||||    
T  14218894 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttga 14218981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 35771440 - 35771526
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| |||||||||||||||||||||||| || ||||||||||||  |||||||||| | ||||||| ||| |||||    
T  35771440 ctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttg 35771526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 4071873 - 4071767
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 117  Q
    |||||||||||||| |||||||||||||||||||||||| || ||| |||||||| || |||||||| | ||||||| ||| |||||  |||| ||| ||    
T  4071873 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgag-aa 4071775  T
Q  118 ttaggttt 125  Q
    ||||||||    
T  4071774 ttaggttt 4071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 15289158 - 15289052
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 117  Q
    |||||||||||||| ||| ||||||||||||||||||||| | ||| |||||||| || |||||||| | ||||||| ||| |||||| |||| ||| ||    
T  15289158 ctaaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgag-aa 15289060  T
Q  118 ttaggttt 125  Q
    ||||||||    
T  15289059 ttaggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 13147458 - 13147524
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| | | ||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  13147458 ccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaa 13147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 48807324 - 48807390
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||  ||||||||||    
T  48807324 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaaca 48807390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 12127149 - 12127237
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  12127149 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 12127237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 11067520 - 11067468
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11067468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 32433589 - 32433641
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 32433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 12754611 - 12754676
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    |||||||||||||| |||||||||||||||||||||||| || | |||||| |||||| ||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaattctaagttatatgattctg-aaactggatttaaca 12754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 14274159 - 14274093
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  14274159 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 14274093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 18955383 - 18955329
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  18955383 ctaaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaaa 18955329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 44374909 - 44374843
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  ||||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  44374909 ccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44374843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 44383774 - 44383708
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  ||||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  44383774 ccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44383708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 47974819 - 47974857
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagt 47974857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 16078382 - 16078317
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    ||||||||||||| ||||||||||||||||||||||||  | ||||| ||||||  ||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaaca 16078317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 20586405 - 20586352
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 20586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 8851159 - 8851211
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 8851211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12372326 - 12372274
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12465260 - 12465312
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 14928290 - 14928362
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 92  Q
    |||||||||||| ||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 15351756 - 15351828
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 92  Q
    |||||||||||| ||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 30820136 - 30820234
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    ||||||||||||||||||||| |||||| ||||||| |||  ||||||| ||| || |||||||| |||||| |||||||| | ||||||| ||| ||||    
T  30820136 gccgatcatcaatactaaggtgagggtgggactaaccttcagtaattctgagt-atgtaattctg-aaactggatttaacaggttgtaggttgtagtttt 30820233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 11054767 - 11054681
Alignment:
Q  17 actaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||||| ||||||| |||  | |||||||||  ||| |||||||||| ||||||||||| | ||||||| |||||||||    
T  11054767 actaaggtaagggtgggactaaccttcaatgattctaagtg-tttgattctgaaaattgaatttaacaggttgtaggttgtaattttg 11054681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 4690662 - 4690716
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    ||||||||| |||| ||||||||||||||||||||||||  | ||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaa 4690716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 15095636 - 15095721
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  15095636 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 15095721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 15140266 - 15140181
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||| ||||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  15140266 ctaaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 15140181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 16999488 - 16999454
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattcta 53  Q
    |||||||||||||||||||||||||||||||||||    
T  16999488 taaggtaagggtgagactaactttctctaattcta 16999454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 18990900 - 18990846
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    ||||||||| ||||| |||||||||||||||||||||||  | ||||||||||||    
T  18990900 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaaa 18990846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 14180397 - 14180450
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  14180397 ctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaa 14180450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12322930 - 12322982
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||  |||||||||||||||||||||||  | |||||||||||    
T  12322930 taaggtaagggtggaactaactttctctaattctaagttgtataattctgaaa 12322982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 14259445 - 14259373
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 92  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  14259445 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtag 14259373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 20620338 - 20620286
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 20620286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 1856553 - 1856584
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  1856553 taagaattgaagttcaggctgtagaataaaca 1856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 13917725 - 13917756
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  13917725 taagaattgaagttcaggctgtagaataaaca 13917756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 19485958 - 19485993
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||| |||||||    
T  19485958 gccgatcatcaatactaaggtaagggtgggactaac 19485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 25926452 - 25926483
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  25926452 taagaattgaagttcaggctgtagaataaaca 25926483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 13698637 - 13698723
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||  |||||||||||| ||||| |||||   ||||||||||||| || |||| ||||| | ||||| ||| |||||    
T  13698637 ctaaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttg 13698723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 42565948 - 42566014
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| ||| |||||||| ||||||||||||  |||||| ||||||| ||||||||||    
T  42565948 ttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataa 42566014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 19283108 - 19283079
Alignment:
Q  19 taaggtaagggtgagactaactttctctaa 48  Q
    ||||||||||||||||||||||||||||||    
T  19283108 taaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 20214200 - 20214147
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| ||||||||||||| |||||| |||  | |||||||||||    
T  20214200 ctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaa 20214147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 24269946 - 24269999
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| || ||||||||||||||| |||||  | |||||||||||    
T  24269946 ctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaa 24269999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 33002205 - 33002168
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagt 33002168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 36685134 - 36685229
Alignment:
Q  7 gatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||||||||||||||  || ||| |||  ||||||| ||| || |||||||| |||||| |||||||| | ||||||| ||| |||||    
T  36685134 gatcatcaatactaaggtaagggtggaaccaaccttcaataattctgagt-atgtaattctg-aaactggatttaacaggttgtaggttgtagttttg 36685229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 46386087 - 46386140
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||| |||||||  ||||||||||||||||||||||||  | |||||||||||    
T  46386087 ctaagataagggtaggactaactttctctaattctaagttgtataattctgaaa 46386140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 10277375 - 10277327
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 10277327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 12557980 - 12557889
Alignment:
Q  12 tcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||| ||||| |||| ||||||||||| ||| ||||||||||||  | | ||||| |||| ||||||||||| | ||||||| ||| |||||    
T  12557980 tcaattctaagataagagtgagactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttg 12557889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 175; Significance: 3e-94; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 16979977 - 16979779
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 105  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  16979977 cgatcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttga 16979878  T
Q  106 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  16979877 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaaca 16979779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 22652825 - 22652640
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 118  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaaactagatttaacatgatgtaggtcgcaattttgatgattagagaaat 22652726  T
Q  119 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22652725 taggttttggtttggaattgattgttaaagagtaggtaatctagtgaattaacataagaattgaagttcaggctgtagaataaaca 22652640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 36528934 - 36528869
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctga 69  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  36528934 gccgatcatcaatactaaggtaagggtgggattaactttctctaattctaagtaatataattctga 36528869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 13522463 - 13522530
Alignment:
Q  134 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  13522463 aattgatcgttaaagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataa 13522530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 33565140 - 33565064
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  33565140 ctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 33565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 15446853 - 15446905
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15446853 gccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15446905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 25202107 - 25202059
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaattgattgttaaa 147  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25202107 attttgatgattagagaaattaggttttgatttggaattgattgttaaa 25202059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 45803451 - 45803522
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||| || |||| |||||||||||||    
T  45803451 aattgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaaca 45803522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 13185948 - 13185862
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| |||||||||||||||||| ||||| || ||||||| ||||  |||||||||| | ||||||| ||| |||||    
T  13185948 ctaaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttg 13185862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 22758835 - 22758909
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 22758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 3263948 - 3264009
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaatt 65  Q
    |||||||||||||||||||||||||||  || |||| ||||||||||||||||||| |||||    
T  3263948 gccgatcatcaatactaaggtaagggtcggattaaccttctctaattctaagtaatataatt 3264009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 11259483 - 11259411
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 92  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||| ||| |||||||| |||| |||||    
T  11259483 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgaatttagcatgttgtag 11259411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 11885560 - 11885632
Alignment:
Q  22 ggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||| ||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 11885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 35960927 - 35961003
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| || |||||||||||||||||| ||  | |||||||||||| ||||||||||| | |||||||    
T  35960927 ctaaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggt 35961003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 48043557 - 48043605
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaattgattgttaaa 147  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  48043557 attttgatgattagagaaattagattttgatttggaattgattgttaaa 48043605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 48631270 - 48631202
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  48631270 aattgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 48631202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 11563791 - 11563692
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||| |  |||||||||||||| ||||||| ||||||||||||||||  | ||||||||||||   ||||||||| | ||||||| ||| |||||    
T  11563791 ccgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttg 11563692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 24177721 - 24177788
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||||| |||||  | |||||||||||    
T  24177721 gccgattatcaatactaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaa 24177788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 14508896 - 14508847
Alignment:
Q  22 ggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||    
T  14508896 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 14508847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 40808049 - 40807996
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40807996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 44274471 - 44274418
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 44274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17045018 - 17044966
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17047178 - 17047126
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17539158 - 17539106
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||||||||||||| |||||||||||||  | |||||||||||    
T  17539158 taaggtaagggtgagactaactttatctaattctaagttgtataattctgaaa 17539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17541486 - 17541434
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22306583 - 22306635
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 22306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 17694115 - 17694045
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||||||||||||||||||||||||  | ||||||| |||| ||| |||| |||| |||||||    
T  17694115 gtaagggtgagactaactttctctaattctaagttgtataattct-aaaattgagtttagcatgttgtaggt 17694045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 52988846 - 52988923
Alignment:
Q  7 gatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||| ||| || | |||||||| | |||||||||||||    
T  52988846 gatcatcaatactaaggtaagggtgagactaaccttcaataattctgagt-atgtgattctgaaga-tgaatttaacatg 52988923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 5200242 - 5200280
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  5200242 ctaaggtaagggtgggactaactttctctaattctaagt 5200280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 9510915 - 9510953
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9510915 ctaaggtaagggtgaaactaactttctctaattctaagt 9510953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 9518890 - 9518928
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9518890 ctaaggtaagggtgaaactaactttctctaattctaagt 9518928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 15566797 - 15566743
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    |||| ||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 15566743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 16050980 - 16050942
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagt 16050942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 17518859 - 17518925
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  |||||| ||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17518859 ccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 17533721 - 17533787
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  |||||| ||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17533721 ccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17533787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 18699431 - 18699505
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  18699431 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 18699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 19568207 - 19568245
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  19568207 ctaaggtaagggtgggactaactttctctaattctaagt 19568245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 40812886 - 40812848
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  40812886 ctaaggtaagggtgggactaactttctctaattctaagt 40812848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 42323970 - 42324056
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||| || | ||||| |||||  | |||||||||||| ||||||| ||||| ||||||| ||| |||||    
T  42323970 ctaaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttg 42324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 49900796 - 49900730
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  |||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  49900796 ccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 49900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 15931508 - 15931545
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15931508 taaggtaaaggtgagactaactttctctaattctaagt 15931545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 5224222 - 5224191
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  5224222 taagaattgaagttcaggctgtagaataaaca 5224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 15465994 - 15465963
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  15465994 taagaattgaagttcaggctgtagaataaaca 15465963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 21845732 - 21845778
Alignment:
Q  100 ttttgatgattagagaaattaggttttggtttggaattgattgttaaa 147  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  21845732 ttttgatg-ttatagaaattaggttttgatttggaattgattgttaaa 21845778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 26054587 - 26054618
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  26054587 taagaattgaagttcaggctgtagaataaaca 26054618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 37641489 - 37641524
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||| |||||||    
T  37641489 gccgatcatcaatactaaggtaagggtgggactaac 37641524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 45577655 - 45577729
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||||||||||| |||  ||||  ||||||| || |||||||||| || |||||||||| |||||||    
T  45577655 taaggtaagggtgagactaacattcaataatcttaagtaa-ttgattctgaaaattggatttaacatgttgtaggt 45577729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 52465356 - 52465391
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||| |||||||    
T  52465356 gccgatcatcaatactaaggtaagggtgtgactaac 52465391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 3160742 - 3160808
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||||||||||||| || |||||||| |||| |||||| ||| ||| ||||||||||    
T  3160742 ttgattgttgaaagagtaggtaattcaatgaattaatataaaaattgatgtttaggttgtagaataa 3160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 10311575 - 10311527
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 10311527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 12155141 - 12155209
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||||| |||| |||||||| ||| ||||||||||| | |||||| ||| ||| ||||||||||    
T  12155141 aattgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgttgaggttgtagaataa 12155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 14967251 - 14967203
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattct 52  Q
    |||||||||||||||||||||||||| | ||||||| |||  |||||||    
T  14967251 gccgatcatcaatactaaggtaagggggggactaaccttcaataattct 14967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 15900639 - 15900839
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  15900639 gccgatcttcaatactaaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatttt 15900738  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  15900739 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataaac 15900838  T
Q  204 a 204  Q
    |    
T  15900839 a 15900839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 15173438 - 15173638
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  15173438 gccgatcatcaatactaaggtaatggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaatgtgatgtaggtggtaatttt 15173537  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||| ||||||    
T  15173538 gatgattaaagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataagaattgaagttcagcctgtaggataaac 15173637  T
Q  204 a 204  Q
    |    
T  15173638 a 15173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 15891629 - 15891754
Alignment:
Q  79 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  15891629 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaa 15891728  T
Q  179 ttgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||| ||||||||    
T  15891729 ttgaagttcaggctgtaaaataaaca 15891754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 27329966 - 27330055
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||  | |||||||| ||| ||| ||||||||| |||||||    
T  27329966 gccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctg-aaattgagtttaacatgttgtaggt 27330055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 27390706 - 27390795
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||  | |||||||| ||| ||| ||||||||| |||||||    
T  27390706 gccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctg-aaattgagtttaacatgttgtaggt 27390795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 18928734 - 18928658
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||  ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  18928734 ctaaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 18928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 19655231 - 19655305
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 19655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 27572122 - 27572188
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||| ||| |||||||||||||    
T  27572122 taaggtaagggtgagactaactttctctaattctaagtcgtataattctg-aaattgaatttaacatg 27572188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 15890711 - 15890796
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| ||||||| ||| |||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttttg 15890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 15998942 - 15998888
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 15998888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 23501725 - 23501641
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||| |||  ||||||||| |  |||||||||||||||||||||||||| | ||||||| ||| ||||    
T  23501725 ctaaggtaagggtgagactaaccttcaataattctaaatg-tttaattctgaaaactgaatttaacaagttgtaggttgtagtttt 23501641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 31731903 - 31732009
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 117  Q
    |||||||||||||| ||||||||||||| ||||||||||  | |||||||||||| || |||| ||| | ||||||| ||| |||||  |||| ||| ||    
T  31731903 ctaaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgag-aa 31732001  T
Q  118 ttaggttt 125  Q
    ||||||||    
T  31732002 ttaggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 28948628 - 28948590
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28948628 ctaaggtaagggtgagactaactttctctaattctaagt 28948590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 27125477 - 27125514
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27125477 taaggtaagggtgagactaactttctctaattctaagt 27125514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 7828024 - 7827972
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 7827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 12041619 - 12041687
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    |||||||||||||| ||||||| |||| |||||||||||  | |||||||||||| || ||||||||||    
T  12041619 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaaattggatttaacatg 12041687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 23150287 - 23150339
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 23150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 24267900 - 24267849
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24267849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 18585615 - 18585549
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  18585615 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 18585549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 19772667 - 19772741
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  19772667 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 19772741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 19401146 - 19401062
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||| ||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 19401062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 18703620 - 18703568
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  18703620 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 18703568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 18709555 - 18709503
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  18709555 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 18709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 20733232 - 20733264
Alignment:
Q  7 gatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||||||||    
T  20733232 gatcatcaatactaaggtaagggtgagactaac 20733264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 1818890 - 1818819
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||| |||||||||||||| || ||||||||| |||| | ||| ||||||  |||||||||||||    
T  1818890 aattgattgttgaaagagtaggtaattcattgaattaacgtaaggaatgaggttcagattgtagaataaaca 1818819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 23415804 - 23415773
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  23415804 taagaattgaagttcaggctgtagaataaaca 23415773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 27852270 - 27852193
Alignment:
Q  7 gatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||||||||||||||||||||||| ||||||| |||  | ||||||||| || | |||||||| | |||||||||||||    
T  27852270 gatcatcaatactaaggtaagggtgggactaaccttcaatcattctaagt-atgtgattctgaaga-tgaatttaacatg 27852193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 18585854 - 18585820
Alignment:
Q  22 ggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||| ||||||||||||||||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagt 18585820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 22806790 - 22806716
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| |  |||||||||| |||||||    
T  22806790 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattatatttaacatgttgtaggt 22806716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 28103433 - 28103467
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaa 38  Q
    |||||||||||||||||||||||||||| ||||||    
T  28103433 gccgatcatcaatactaaggtaagggtgggactaa 28103467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 29045334 - 29045293
Alignment:
Q  8 atcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    |||||| || |||||||||||||||||||| |||||||||||    
T  29045334 atcatctattctaaggtaagggtgagactagctttctctaat 29045293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 19825472 - 19825516
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  19825472 ccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 29045202 - 29045134
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||| ||||||| ||||||||||    
T  29045202 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataa 29045134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 29203 - 29401
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 105  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  29203 cgatcatcaatactaaggtaagagtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtagatggtaattttga 29302  T
Q  106 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  29303 tgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaaca 29401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 121005 - 120931
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  121005 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 120931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 3e-91; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 10694245 - 10694430
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 118  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10694245 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10694344  T
Q  119 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10694345 taggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaaca 10694430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 40620599 - 40620399
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  40620599 gccgatcatcaatactaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggtggtaatttt 40620500  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||||    
T  40620499 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggccgtaggataaac 40620400  T
Q  204 a 204  Q
    |    
T  40620399 a 40620399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 10908011 - 10908196
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 118  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10908011 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10908110  T
Q  119 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  10908111 taggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggctgtagaataaaca 10908196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 15009030 - 15008835
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctg-aaaactgaatttaacatgatgtaggtggtaattt 102  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  15009030 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaaactggatttaacatgatgtaggtggtaattt 15008931  T
Q  103 tgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaa 202  Q
    ||||||||||||||||||||||||      ||||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||||    
T  15008930 tgatgattagagaaattaggtttt------gaattgattgttaaagagttggtaattcaatgaattaacataagaattaaagttcaggctgtagaataaa 15008837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 9924207 - 9924131
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  9924207 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 9924131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 21249 - 21151
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    ||||||||||| |||||||||| |||| |||||||||||  | ||||||||| || ||||||||||||| ||||||| ||| |||||| |||| |||||    
T  21249 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaa 21151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 11478652 - 11478718
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    |||||||||||||||||||||||| ||||||||||||||  | |||||||||||| |||||||||||    
T  11478652 ctaaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaaca 11478718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 14187025 - 14186973
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  14187025 gccgatcatcaatactaaggtaagggtgggagtaactttctctaattctaagt 14186973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 2424386 - 2424424
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagt 2424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 9870443 - 9870529
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||| |||||||| |||||||||||  |||||||||||  | |||||||||||| || |||| ||||||||||||| ||| |||||    
T  9870443 ctaagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttg 9870529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 14549813 - 14549775
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14549813 ctaaggtaagggtgagactaactttctctaattctaagt 14549775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 21062694 - 21062596
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||| | |||||| || |||||||| |  |||||| ||| |||||| |||| |||||    
T  21062694 ctaaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaa 21062596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 15115275 - 15115222
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15115222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 11425995 - 11425943
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 11425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19610376 - 19610324
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  19610376 taaggtaagggtgagactaactttctctaattttaagttgtataattctgaaa 19610324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25091705 - 25091653
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 25091653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 37019723 - 37019648
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| |||||||||||||||||| |||||  | |||||||| ||| ||| ||||||||| |||||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctg-aaattgagtttaacatgttgtaggt 37019648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 53630474 - 53630526
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 53630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 9622425 - 9622354
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  |||||||||||||    
T  9622425 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaaca 9622354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 10057728 - 10057648
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    |||||||||||||||||||||||||||| ||||||| |||  ||||||| ||| || | |||||||| | |||||||||||||    
T  10057728 gccgatcatcaatactaaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaga-tgaatttaacatg 10057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 19434558 - 19434596
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  19434558 ctaaggtaagggtgggactaactttctctaattctaagt 19434596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 16998577 - 16998540
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  16998577 taaggtaagagtgagactaactttctctaattctaagt 16998540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 35811376 - 35811413
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  35811376 taaggtaagggtgggactaactttctctaattctaagt 35811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 10356436 - 10356488
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||| || ||||||||||||||||||||||||  | |||||||||||    
T  10356436 taaggtaaggttgggactaactttctctaattctaagttgtataattctgaaa 10356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 35660862 - 35660758
Alignment:
Q  99 attttgatgattagagaaattaggttttg-gtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtag 196  Q
    |||||||||||||||||||||||| ||||  |||  ||||||||||| | ||||||||||||||  |||| |||  ||| |||||  ||||||| |||||    
T  35660862 attttgatgattagagaaattagggtttgaatttaaaattgattgttgagagagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtag 35660763  T
Q  197 aataa 201  Q
    |||||    
T  35660762 aataa 35660758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 46001535 - 46001583
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaa 46001583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 15613143 - 15613069
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 93  Q
    |||||||||||||| ||||||| |||| |||||||||||  | |||||||| ||| || |||||||||| ||||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctg-aaattggatttaacatgttgtagg 15613069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 51993614 - 51993540
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 93  Q
    |||||||||||||| ||||||| |||| |||||||||||  | |||||||| ||| || |||||||||| ||||||    
T  51993614 ctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctg-aaattggatttaacatgttgtagg 51993540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 14477568 - 14477502
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| ||||||||||||  |||||| ||||||  ||||||||||    
T  14477568 ttgattgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataa 14477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 6633541 - 6633589
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 6633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 15011497 - 15011545
Alignment:
Q  46 taattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  15011497 taattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 15011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 19022410 - 19022366
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    ||||||||| |  ||||||||| ||||||||||||||||||||||    
T  19022410 ccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42875849 - 42875797
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| |||||||||| | |||||||||||  | |||||||||||    
T  42875849 taaggtaagggtgggactaactttatataattctaagttgtataattctgaaa 42875797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 23479149 - 23478949
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||||||||||||||||||||    
T  23479149 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtatttaaattatgaaaactggatttaacatgatgtaggtggtaatttt 23479050  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  23479049 gatgattagagaaattaggttttggtttggaagtgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaac 23478950  T
Q  204 a 204  Q
    |    
T  23478949 a 23478949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 19880889 - 19880690
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  19880889 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaag-attttaattctgaaaactaaatttaacatgatgtaggtggtaatttt 19880791  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  19880790 gatgattagagaaattaggttttgttttggaattgattgttaaagagtaggtaattaaatgaattaacataagaattgaagttcaggctgtagaataaac 19880691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 26454775 - 26454573
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  26454775 gccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatttt 26454676  T
Q  104 gatgattagagaa--attaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  26454675 gattattagagaaatattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattaaagttcaggctgtagaataa 26454576  T
Q  202 aca 204  Q
    |||    
T  26454575 aca 26454573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 16198902 - 16198703
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  16198902 ccgatcatcaatactaaggtaaaagtgggactaactttctctaattctaagtattttcattctgaaaactggatttaacatgatgtaggtggtaattttg 16198803  T
Q  105 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  16198802 atgataagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaaca 16198703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 25657513 - 25657699
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 117  Q
    |||| ||||||||| || |||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  25657513 ctaaagtaagggtgggagtaactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggtggtaattttgatgattagagaaa 25657612  T
Q  118 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  25657613 ttaggttttggtttgaaattgattgttaaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaaca 25657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 17158949 - 17159102
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  17158949 ccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattttgaaaactagatttaacatgatgtaggtggtaattttg 17159048  T
Q  105 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17159049 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 17159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 36727037 - 36727122
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| || |||||||| | ||||||| ||| ||||    
T  36727037 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttt 36727122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 45469218 - 45469294
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||  |||||||||| | |||||||    
T  45469218 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggt 45469294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 20022026 - 20022125
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||  |||||||||| | ||||||| ||| |||||    
T  20022026 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttg 20022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 20879411 - 20879343
Alignment:
Q  134 aattgattgttaaa-gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  20879411 aattgattgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataa 20879343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 23899986 - 23900061
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 93  Q
    |||||||||||||| |||||||||||||||||||||||| || ||| ||||| || ||||||||||| | ||||||    
T  23899986 ctaaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtagg 23900061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12577949 - 12577901
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  12577949 actgctgatcatcaatactaaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20083638 - 20083690
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 20083690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22254819 - 22254743
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||| |||| ||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  22254819 ctaaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 22254743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 22483706 - 22483647
Alignment:
Q  145 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    |||||||||||||||   |||||||||||||||||||| ||||||| |||||||||||||    
T  22483706 aaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaaca 22483647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 4380616 - 4380670
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 4380670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 31722492 - 31722578
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||| |||||||| ||||||||||||||||||||||||  | ||||| ||||||  |||||||||| | ||||||| ||| |||||    
T  31722492 ctaagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttg 31722578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 18761500 - 18761447
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    ||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  18761500 taaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaaa 18761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 17906848 - 17906923
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||||||||||||||||||||  | | |||||| |||||| |||||||| | |||||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctg-aaactggatttaacaagttgtaggt 17906923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 21676717 - 21676773
Alignment:
Q  145 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  21676717 aaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 21676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 22610380 - 22610451
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  |||||||||||||    
T  22610380 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaaca 22610451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 5761586 - 5761548
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaattctaagt 5761548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 22532131 - 22532169
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22532131 ctaaggtaagggtgggactaactttctctaattctaagt 22532169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 22536816 - 22536854
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22536816 ctaaggtaagggtgggactaactttctctaattctaagt 22536854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 6101752 - 6101805
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |||| ||||||||||||||||||||||||  | |||||||||||    
T  6101752 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 6101805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 6573060 - 6573093
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||||||||||||||||||||||    
T  6573060 gtaagggtgagactaactttctctaattctaagt 6573093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 17218754 - 17218701
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    |||| |||||||| ||||||||||||||| ||||||||| | ||||||||||||    
T  17218754 taagataagggtgggactaactttctctagttctaagtattataattctgaaaa 17218701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 20397509 - 20397562
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  20397509 ctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaa 20397562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 6202824 - 6202776
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaa 6202776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 19700214 - 19700122
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 110  Q
    |||||||||||||| ||||||| |||| |||||||||||  | ||||||| | ||  | |||||||||| ||||||| ||| |||||| ||||    
T  19700214 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatt 19700122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 23889852 - 23889785
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||| ||||||||||| |||||||||||||||||| ||  | |||||||| ||| |||||||||||||    
T  23889852 ctaagctaagggtgagattaactttctctaattctaggttgtataattctg-aaattgaatttaacatg 23889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 42817907 - 42817959
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| |||| |||||||||||||||||||  | |||||||||||    
T  42817907 taaggtaagggtgggacttactttctctaattctaagttgtataattctgaaa 42817959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 14397063 - 14397094
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  14397063 taagaattgaagttcaggctgtagaataaaca 14397094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 23419494 - 23419427
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacat 85  Q
    |||||||||||||| ||||||| |||| |||||||||||  | ||||||||| || || |||||||||    
T  23419494 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacat 23419427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 23884107 - 23884036
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||| |||||||||||||  || ||||||||| |||| | ||||||||||  |||||||||||||    
T  23884107 aattgattgttgaaagagtaggtaaatcattgaattaacgtaaggaatgaagttcagattgtagaataaaca 23884036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 20517172 - 20517238
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||    
T  20517172 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataa 20517238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 22317910 - 22317975
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    |||||||||||||| ||||||| ||| ||||||||||||  | | |||||||||| |||||||||||    
T  22317910 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaaca 22317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 22345059 - 22344993
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||    
T  22345059 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataa 22344993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 22356719 - 22356653
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||    
T  22356719 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataa 22356653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 23948316 - 23948230
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||||  |||||| |||| |||||||||||  | | |||||||||| || |||||||| | ||||||| ||| |||||    
T  23948316 ctaaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttg 23948230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 39936007 - 39936044
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||| || |||||||||||||||||||||    
T  39936007 taaggtaagggtgggattaactttctctaattctaagt 39936044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 41680118 - 41680163
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    ||||||||||||||||||||||| |||| ||||||| |||| ||||    
T  41680118 gccgatcatcaatactaaggtaaaggtgggactaaccttctttaat 41680163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19140816 - 19140765
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||| ||||||||||||||||||  | |||||||||||    
T  19140816 taaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaa 19140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 36306063 - 36306019
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  36306063 ccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 37292753 - 37292705
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 37292705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 9026 - 8827
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9026 ccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactgaattgaacatgatgtaggtggtaattttg 8927  T
Q  105 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||  || ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  8926 atgagaagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaaca 8827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 11290 - 11090
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||  ||||||||| |||||||||||||||||    
T  11290 gccgatcatcaatactaaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaaactagatttaacataatgtaggtggtaatttt 11191  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  11190 gatgattagagaaattaggttttgatttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaac 11091  T
Q  204 a 204  Q
    |    
T  11090 a 11090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 160; Significance: 2e-85; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 2003 - 1804
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  2003 ccgatcatcaatactaaggaaagggtgggactaactttatctaattctaagtattttaattctgaaaacggtatttaacatgatgtaggtggtaattttg 1904  T
Q  105 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  1903 atgattagagaaattattttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaaca 1804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 5044 - 5082
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 10754 - 10792
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagt 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 21763 - 21962
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||    
T  21763 ccgatcatcaatactaaggtaaggatgggactaactttctctaattctaagtattttaaatttgaaaactggatttaacatgatgtaggtggtaattttg 21862  T
Q  105 atgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  21863 atgattagagaaattaggttttggtttgaaaatgattgttaaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaaca 21962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 6435 - 6288
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||    
T  6435 gccgatcatcaatactaatgtaagggtgggactaactttctctaattctaagtattttaattttgaaaactggatttgacatgatgtaggtggtaatttt 6336  T
Q  104 gatgattagagaaattaggttttggtttggaattgattgttaaagagt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6335 gatgattagagaaattaggttttggtttggaattgattgttaaagagt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 59771 - 59837
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| ||| ||||||||||||| |||||||| |||| |||||| ||| ||| ||||||||||    
T  59771 ttgattgttgaaatagtaggtaatccaatgaattaatataaaaattgatgtttaggttgtagaataa 59837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 14667 - 14771
Alignment:
Q  100 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  14667 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 14766  T
Q  200 aaaca 204  Q
    |||||    
T  14767 aaaca 14771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 23725 - 23829
Alignment:
Q  100 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  23725 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 23824  T
Q  200 aaaca 204  Q
    |||||    
T  23825 aaaca 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 110222 - 110141
Alignment:
Q  23 gtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttg 110141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 328287 - 328321
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattct 52  Q
    |||||||||||||| ||||||||||||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaattct 328321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 4708 - 4784
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||||||| | |||||||    
T  4708 ctaaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggt 4784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 12178 - 12111
Alignment:
Q  134 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||||    
T  12178 aattgattgttaaagagtaggtaacccaatgaattaacataagaattgatgttcaggttgtagaataa 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 35543 - 35359
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 117  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| |||| |||| |||||||  || |||||   ||| | | ||    
T  35543 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggt--tagttttgggaatttg-ggaa 35448  T
Q  118 ttaggttttg-gtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||   | | ||||| ||||| |||| ||| |||||||| | |||||||||||||||||| ||||||| |||||||||||||    
T  35447 ttaggttttgaagtcgtaattggttgttaaaagtgtatgtaatccaataaattaacataagaattgatgttcaggttgtagaataaaca 35359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 60948 - 60850
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    ||||||||||| |||||||||| |||| |||||||||||  | ||||||||| || ||||||||||||| ||||||| ||| |||||| |||| |||||    
T  60948 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaa 60850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 1044 - 1133
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||| |  |||||||||||||| |||||||||||||| |||||||||  | |||||||||||| ||||||||||| | |||||||    
T  1044 ccgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggt 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 20007 - 19931
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  20007 ctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 19931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 15339 - 15287
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15339 gccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 112965 - 113052
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctg-aaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    ||||| |||||||| |||||||||||||||||||||||| || ||| |||| |||| ||||||||||| | ||||||| |||||||||    
T  112965 ctaagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttg 113052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 117805 - 117873
Alignment:
Q  17 actaaggtaagggtgagactaactttctctaattctaagtaatttaattctg-aaaactgaatttaaca 84  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| |||| |||| |||||||||||    
T  117805 actaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaaca 117873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 61834 - 61901
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  61834 ccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 61901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 30705 - 30631
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  30705 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 30631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 5695 - 5801
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 197  Q
    |||||||||||||||||||||||||||||  |  |||||||||||| ||| | ||| |||| || |||||||   ||  |||||| ||||||| ||||||    
T  5695 attttgatgattagagaaattaggttttgaatcagaattgattgttgaaaaactagataattcaatgaattagtgtacaaattgatgttcaggttgtaga 5794  T
Q  198 ataaaca 204  Q
    |||||||    
T  5795 ataaaca 5801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 43866 - 43972
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 197  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || | |||||   ||  |||||| ||| ||| ||||||    
T  43866 attttgatgattagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaattaattagtgtacaaattgatgtttaggttgtaga 43965  T
Q  198 ataaaca 204  Q
    |||||||    
T  43966 ataaaca 43972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 39174 - 39245
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaatta 169  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || |||||||    
T  39174 attttgatctttagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaatgaatta 39245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 77740 - 77687
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  77740 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 77687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32046 - 31994
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 31994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37353 - 37301
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 37301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 191 - 116
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 116  T

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Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 79101 - 79049
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 79049  T

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Target: scaffold0632 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 1232 - 1165
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||| ||||||||||||||||||||| ||||||||||  ||||||||||||  | |||||||||||    
T  1232 gccgattatcaatactaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaa 1165  T

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Target: scaffold0577 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 9126 - 9029
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 103  Q
    |||||||||||||||||||||||||||| ||||||| |||  ||||||| ||| || |||||||| |||||| |||||||| | ||||||| ||| ||||    
T  9126 gccgatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagt-atgtaattctg-aaactggatttaacaggttgtaggttgtagtttt 9029  T

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Target: scaffold0203 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 17926 - 17993
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  17926 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 17993  T

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Target: scaffold0819 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 5433 - 5352
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||||||| ||| |||||||||||||| ||||||| ||| ||||||||||||  | | |||||||||| |||||||||||||    
T  5433 gccgatcattaattctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacatg 5352  T

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Target: scaffold0589 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 4438 - 4340
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    ||||||||| | || ||||||| |||| |||||||||||  | ||||||||| ||||| |||||||||| ||||||| ||| |||||| |||| |||||    
T  4438 ctaaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaa 4340  T

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Target: scaffold0411 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 13416 - 13501
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||| |||  ||||||||||   |||||||||||||||||||||||||| | ||||||| ||| |||||    
T  13416 ctaaggtaagggtgggactaaccttcaataattctaaggg-tttaattctgaaaactgaatttaacaagttgtaggttgtagttttg 13501  T

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Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 571 - 533
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  571 ctaaggtaagggtgagactaactttctctaattctaagt 533  T

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Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 17043 - 16977
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  17043 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 16977  T

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Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 26574 - 26508
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  26574 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 26508  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 135503 - 135588
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||| ||| ||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  135503 ctaaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttg 135588  T

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Target: scaffold0407 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 11274 - 11311
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11274 taaggtaagggtgagactaactttctctaattctaagt 11311  T

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Target: scaffold1939 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 65 - 1
Alignment:
Q  134 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 197  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| | ||||||    
T  65 aattgattgttgaaagagtaggtaatccaaagaattaacataagaattgatgttcatgttgtaga 1  T

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Target: scaffold1766 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 695 - 770
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||| ||||| ||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  695 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 770  T

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Target: scaffold1633 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1257 - 1205
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 468 - 520
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23604 - 23556
Alignment:
Q  1 actgccgatcatcaatactaaggtaagggtgagactaactttctctaat 49  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  23604 actgccgatcatcaatactaaggtaagggtaggactagctttctctaat 23556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 34391 - 34339
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| |||||||||||||||||||||| |  |||||||||||||    
T  34391 taaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaa 34339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 6003 - 5929
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 93  Q
    |||||||||||||| ||||||| |||| |||||||||||  | |||||||| ||| ||||||||||||| ||||||    
T  6003 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctg-aaattgaatttaacatgttgtagg 5929  T

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Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 78185 - 78237
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 78237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 143663 - 143611
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 143611  T

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Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 168998 - 169051
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||| ||||| ||||||||||||||||||||||||  | |||||||||||    
T  168998 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaa 169051  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24131 - 24183
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 30122 - 30048
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||| ||||||| |||  ||| |||||||  |||||||||||||| || |||||||||| |||||||    
T  30122 aaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 30048  T

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Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 35565 - 35636
Alignment:
Q  99 attttgatgattagagaaattaggttttggtttggaa-ttgattgttaaagagtaggtaatccagtgaatta 169  Q
    ||||||||| ||||||||||||||||||| ||| ||| |||||||||||| ||||| |||| || |||||||    
T  35565 attttgatggttagagaaattaggttttgatttagaatttgattgttaaaaagtagataattcaatgaatta 35636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 58812 - 58761
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||| | | ||||||||||||| ||||||||||||||||||||||||    
T  58812 ccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagt 58761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 28029 - 27954
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  28029 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 27954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 42887 - 42812
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  42887 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 42812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 2199 - 2253
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    |||||||||||||| |||||| |||||||||||||||||  | ||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaa 2253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 2621 - 2555
Alignment:
Q  5 ccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||| |  ||| |||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  2621 ccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 2555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5860 - 5914
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    ||||||||| ||||| |||||||||||||||||||||||  | ||||||||||||    
T  5860 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaaa 5914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 19806 - 19768
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19806 ctaaggtaagggtgagactgactttctctaattctaagt 19768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 6910 - 6976
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  6910 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 6688 - 6722
Alignment:
Q  22 ggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||| ||||||||||||||||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagt 6722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 28650 - 28584
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||| | ||||||||||||| |||||| ||||||| ||||||||||    
T  28650 ttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataa 28584  T

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Target: scaffold0213 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19260 - 19206
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaa 72  Q
    |||| ||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  19260 ctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 19206  T

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Target: scaffold0207 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 13391 - 13476
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||||||||||||||| ||||  | |||||||| ||| ||| |||| |||| ||||||| ||| |||||    
T  13391 ctaaggtaagggtgggactaactttctctaattccaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttttg 13476  T

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Target: scaffold0175 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 8695 - 8610
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  8695 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 8610  T

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Target: scaffold0156 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 16669 - 16572
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||||||  ||||||| |||||| ||| |||||||||||||  | | |||||| |||||| ||||||||||  |||||| ||| |||||    
T  16669 cgatcatcaatactaagcaaagggtgggactaaatttatctaattctaagttgtatgattctg-aaactggatttaacatgtggtaggttgtagttttg 16572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 67174 - 67108
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 84  Q
    ||||||||| |||| ||||||||||||||||||| ||||  | |||||||||||| || ||||||||    
T  67174 ctaaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaaca 67108  T

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Target: scaffold0040 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 106050 - 106088
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  106050 ctaaggtaagggtgtgactaactttctctaattctaagt 106088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 196 - 233
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagt 56  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaattctaagt 233  T

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Target: scaffold0256 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 1845 - 1913
Alignment:
Q  17 actaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||||||  ||||| ||||||||||||||||||||||||  | |||||||| ||| |||||||||||||    
T  1845 actaaggtgtgggtgggactaactttctctaattctaagtggtataattctg-aaattgaatttaacatg 1913  T

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Target: scaffold0241 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 3235 - 3182
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||  ||||||||||||||||||||||||  | |||||||||||    
T  3235 ctaaggtaagggttggactaactttctctaattctaagttgtataattctgaaa 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 29572 - 29625
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||||| |||||||||||| |||||||||||  | |||||||||||    
T  29572 ctaaggtaagggtgggactaactttctataattctaagttgtataattctgaaa 29625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 21664 - 21626
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  21664 ctaaggtaagggtgggactagctttctctaattctaagt 21626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 5432 - 5383
Alignment:
Q  22 ggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 12534 - 12585
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  12534 aaggtaagggtgggaataactttctctaattctaagttgtataattctgaaa 12585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4714 - 4766
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    ||||||||||||  ||||||||||||||||||||||||  | |||||||||||    
T  4714 taaggtaagggtcggactaactttctctaattctaagttgtataattctgaaa 4766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 4993 - 4901
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 110  Q
    |||||||||||||| ||||||| |||| |||||||||||  | ||||||||| |  || |||||||||| ||||||  ||| |||||| ||||    
T  4993 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgaggatt 4901  T

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Target: scaffold0555 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 8925 - 8981
Alignment:
Q  147 agagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaac 203  Q
    |||||||||| || | ||||||||| |||||||||| ||||||| ||||||||||||    
T  8925 agagtaggtagtcgaatgaattaacgtaagaattgatgttcaggttgtagaataaac 8981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 20085 - 20160
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||| | ||||||| ||| ||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  20085 ctaaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggt 20160  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7330 - 7254
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||| |||||| ||||||| |||| |||||||||||  | |||||||||||| || |||| ||||| |||||||    
T  7330 ctaaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggt 7254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 15022 - 14942
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||||||||||||||||| |||||| ||||||  || | |||||||||||  |  ||||||||||| || ||||||||||    
T  15022 cgatcatcaatactaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattggatttaacatg 14942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 17042 - 16962
Alignment:
Q  6 cgatcatcaatactaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 86  Q
    ||||||||||||||||||| |||||| ||||||  || | |||||||||||  |  ||||||||||| || ||||||||||    
T  17042 cgatcatcaatactaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattggatttaacatg 16962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 398615 - 398523
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 110  Q
    |||||||||||||| ||||||| |||| |||||||| ||  | ||||||||| || || |||||||||| ||||||  ||| |||||| ||||    
T  398615 ctaaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatt 398523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 6893 - 6819
Alignment:
Q  19 taaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    ||||||||||||||||||||| |||  ||||  ||||| ||| ||||||||||| || |||||||||| |||||||    
T  6893 taaggtaagggtgagactaacattcaataatcttaagtcatt-aattctgaaaattggatttaacatgttgtaggt 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 19452 - 19483
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  19452 taagaattgaagttcaggctgtagaataaaca 19483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 7606 - 7535
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 91  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| ||||    
T  7606 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaatgtatttaacatgttgta 7535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 18493 - 18462
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaaca 204  Q
    ||||||||||||||||||||||||||||||||    
T  18493 taagaattgaagttcaggctgtagaataaaca 18462  T

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Target: scaffold0153 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 5364 - 5329
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||| |||||||    
T  5364 gccgatcatcaatactaaggtaagggtgggactaac 5329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 12384 - 12349
Alignment:
Q  4 gccgatcatcaatactaaggtaagggtgagactaac 39  Q
    |||||||||||||||||||||||||||| |||||||    
T  12384 gccgatcatcaatactaaggtaagggtgggactaac 12349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 5712 - 5759
Alignment:
Q  24 taagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||| ||||||||||||||||||||||||  | |||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaa 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 5304 - 5342
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagt 56  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagt 5342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 203
Target Start/End: Complemental strand, 42571 - 42541
Alignment:
Q  173 taagaattgaagttcaggctgtagaataaac 203  Q
    |||||||||||||||||||||||||||||||    
T  42571 taagaattgaagttcaggctgtagaataaac 42541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 38558 - 38624
Alignment:
Q  136 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 201  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||| ||||||| ||| ||||||    
T  38558 ttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgtggaataa 38624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 52543 - 52641
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    ||||| |||||||| ||||||| |||  |||||||||||  | ||||||||| || || |||||||||| ||||||  ||| |||||| |||| |||||    
T  52543 ctaagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaa 52641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 29441 - 29355
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||||| ||||||  |||| |||||||||||  | | |||||||||| || |||||||| | ||||||| ||| |||||    
T  29441 ctaaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttg 29355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 21746 - 21672
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||| ||||| | |||  |||||||||||  ||||||| |||||| || |||||||||| |||||||    
T  21746 aaggtaagggtgggactagccttcaataattctaagtgttttaattttgaaaattgtatttaacatgttgtaggt 21672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 96451 - 96354
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 116  Q
    |||| |||| |||| |||||||||||||||||||| |||  | | |||||||||| || |||||||| | ||||||| ||| |||||| |||| |||||    
T  96451 ctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaa-tggatttaacaagttgtaggttgtagttttgaggattggagaa 96354  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 146776 - 146723
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaa 71  Q
    |||||||| ||||| ||||||||| ||||||||||||||  | |||||||||||    
T  146776 ctaaggtatgggtgggactaacttactctaattctaagttgtataattctgaaa 146723  T

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Target: scaffold0452 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 12649 - 12697
Alignment:
Q  46 taattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  12649 taattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 12697  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 31161 - 31086
Alignment:
Q  18 ctaaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||||| ||||||| |||  ||||||| ||| || |||||||||||| || |||||||| | |||||||    
T  31161 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaacaagttgtaggt 31086  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 22123 - 22075
Alignment:
Q  46 taattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 94  Q
    |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  22123 taattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 22075  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 3053 - 3136
Alignment:
Q  20 aaggtaagggtgagactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 104  Q
    |||||||||||| ||||||| |||  |||||||||||   ||| ||||||||| ||||||||||| | ||||||| ||| |||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagtgtatta-ttctgaaaattgaatttaacaagttgtaggttgtagttttg 3136  T

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