View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11312_low_3 (Length: 404)
Name: NF11312_low_3
Description: NF11312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11312_low_3 |
 | |
|
| [»] scaffold0004 (1 HSPs) |
| | |
|
| [»] scaffold0180 (1 HSPs) |
| | |
|
| [»] scaffold0238 (1 HSPs) |
| | |
|
| [»] scaffold0126 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0070 (1 HSPs) |
| | |
|
| [»] scaffold0063 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 299; Significance: 1e-168; HSPs: 26)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 389
Target Start/End: Original strand, 40810522 - 40810907
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttcnnnnnnnnnnnnctatgtgtaaagtttgttgaagttcat |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||||| || ||||||||||| |
|
|
| T |
40810522 |
ttcaaggtctcaggttcgattctctctggtgccaatttgagagggttagtttagcttcttcaaaaaaaaaaac---tgtgtaaagattcttgaagttcat |
40810618 |
T |
|
| Q |
101 |
tgggccttcatatttttggcatacaaagcatttcttaacataagttgtaatgcaaaaggatgcacatcagaattgtaatgtgaatctaattgtttctggt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| |
|
|
| T |
40810619 |
tgggccttcatatttttggcatacaaagcatttcttaacataagttgtaatgcaaaaggatgcacatcagaattgtcaagtgcatctaattgtttctggt |
40810718 |
T |
|
| Q |
201 |
gtggtctgcagagaagtaattgtgttactagggtcttaacgtgatgcacttggttgtgatgcgtgtatttcagtagttatcttgagttgtttatcttttt |
300 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40810719 |
gtggtctgcagagaaggaattgtgttactagggtcttaacgtgatgcacttggttgtgatgcgtgtatttcagtagttatcttgagttgtttatcttttt |
40810818 |
T |
|
| Q |
301 |
gaatgccacttctcatctgcttagaaagtattctcctggcttgattgttatgcctttgtgcaataatgtatgtttctttgacatctctg |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
40810819 |
gaatgccacttctcatctgcttagaaagtattctcctggcttgattgttatgcctttgtgcaataatgtatgtttctttgacatttctg |
40810907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 2799918 - 2799977
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2799918 |
tcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc |
2799977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 8177202 - 8177143
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8177202 |
tcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc |
8177143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 29753705 - 29753764
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || | ||||||||||||||||| |
|
|
| T |
29753705 |
tcaaggtctcaggttcgattctctctggtgccaatttaagagggttagtttagcttcttc |
29753764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 33700793 - 33700735
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||| |
|
|
| T |
33700793 |
tcaaggtctcaggttcgattctctctggtgccaatttaagggggttagtttaacttctt |
33700735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 36371526 - 36371584
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
36371526 |
tcaaggtctgaggttcgattctctctgatgccaatttgagggggttagtttagcttctt |
36371584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 8904470 - 8904526
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttc |
58 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||| ||||||||| |||| |
|
|
| T |
8904470 |
tcaaggtctcaagttcgattctctctggtgccaatttgagggggttagtttaacttc |
8904526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 3679323 - 3679276
Alignment:
| Q |
13 |
ggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
3679323 |
ggttcgattctctctggtgccaatttgagggggttagtttagcttctt |
3679276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 11063612 - 11063671
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||| ||||||||||||| || |||||||||||| || ||||||||||||||||| |
|
|
| T |
11063612 |
tcaaggtcttaggttcgattctctctagtgccaatttgaaggggttagtttagcttcttc |
11063671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 1247169 - 1247227
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||| || |||| ||||||||||| |
|
|
| T |
1247169 |
tcaaggtctcaggttcgattctctctggtaccaatttgaaggggttattttagcttctt |
1247227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32524386 - 32524439
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttag |
54 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
32524386 |
ttcaagatctcaagttcgattctctctggtgccaatttgagggggttagtttag |
32524439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 50920012 - 50920068
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| |
|
|
| T |
50920012 |
aaggtttcaggttcgattctctctggtgtcaatttgaaggggttagtttagcttctt |
50920068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 9165215 - 9165156
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||| ||||||||||| |||||| |||||||||||||||||| |||| ||||| |||||| |
|
|
| T |
9165215 |
tcaaagtctcaggttcaattctctctggtgccaatttgagggggttactttagtttcttc |
9165156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 3265980 - 3266019
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgag |
41 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
3265980 |
tcaaggtctcaggttcgattctctctggttccaatttgag |
3266019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 4566608 - 4566662
Alignment:
| Q |
6 |
ggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||| |
|
|
| T |
4566608 |
ggtctcaggttcgattctctctgatgtcaatttaaggg-gttagtttagcttcttc |
4566662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 15786340 - 15786290
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagttta |
53 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
15786340 |
tcaaggtctcaggttcgattctctttggtgtcaatttgaggg-gttagttta |
15786290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 43446019 - 43446074
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagctt |
57 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||||||| | | ||||||||||| |
|
|
| T |
43446019 |
tcaaggtctcatgttcgattctccccggtgccaatttgagtgggctagtttagctt |
43446074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 33981175 - 33981125
Alignment:
| Q |
10 |
tcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||| |||||||||||||||| |
|
|
| T |
33981175 |
tcaggttcgattctctctgatgctcatttgagggggttagtttagcttctt |
33981125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 35403070 - 35403116
Alignment:
| Q |
15 |
ttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||| || ||||||||| |||||||||||||||||||||| |
|
|
| T |
35403070 |
ttcgattctctgtgatgccaatttaagggagttagtttagcttcttc |
35403116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 8077698 - 8077731
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
8077698 |
aggtctcaggttcgattctctctggtgccaattt |
8077731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 9500501 - 9500468
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
9500501 |
aggtctcaggttcgattctctctggtgccaattt |
9500468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 15059548 - 15059515
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
15059548 |
aggtctcaggttcgattctctctggtgccaattt |
15059515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 18646904 - 18646937
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
18646904 |
aggtctcaggttcgattctctctggtgccaattt |
18646937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 35700008 - 35700068
Alignment:
| Q |
2 |
tcaaggtctcagg--ttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||| |||||||||| |||||| |||||| |||| ||| |||||||||||| |
|
|
| T |
35700008 |
tcaaggtctcaggggttcgattctctctggtgtcaatttaagggggttggtttagcttctt |
35700068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 45266890 - 45266927
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttg |
39 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
45266890 |
tcaaggtctcaggttcgattctccccggtgccaatttg |
45266927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 51814550 - 51814587
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttg |
39 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
51814550 |
tcaaggtctcaggttcgattctctccggtgccaatttg |
51814587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11306195 - 11306135
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11306195 |
ttcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc |
11306135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 23910131 - 23910074
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23910131 |
tcaaggtctcaggttcgaatctc--tggtgccaatttgagggggttagtttagcttcttc |
23910074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 12188323 - 12188264
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||| ||| ||||||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
12188323 |
tcaaggtttcaagttcgattctctctagtgccaatttgagggggttagtttagcttcttc |
12188264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13330143 - 13330201
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||| |||||||||| || ||||||||||||| | |||||||||||||||| |
|
|
| T |
13330143 |
tcaaggtctcagattcgattctctcttgtgccaatttgagagggttagtttagcttctt |
13330201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 15951322 - 15951264
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||| |||| |||||| ||||| |||||||||| | |||||||||||||||| |
|
|
| T |
15951322 |
tcaaggtctcatgttcaattctctctggtaccaatttgagagggttagtttagcttctt |
15951264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 3925800 - 3925858
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||| ||||||| ||| |||||| ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
3925800 |
tcaaagtctcagattcaattctctctggtatcaatttgagggggttagtttagcttctt |
3925858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 9583421 - 9583479
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||| | | |||||||||||||||| |
|
|
| T |
9583421 |
tcaaggtctccagttcgattctctctggtgccaatttcggtgggttagtttagcttctt |
9583479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 24334045 - 24333987
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||||||| |||||| | |||||||||||| | | | |||||||||||||| |
|
|
| T |
24334045 |
tcaaggtctcaggttcaattctcaccggtgccaatttgggtgggctagtttagcttctt |
24333987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 11448922 - 11448955
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
11448922 |
aggtctcaggttcgattctctctggtgccaattt |
11448955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 6691571 - 6691535
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
6691571 |
tcaaggtctcaggttcgattctctccggtgccaattt |
6691535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 9208300 - 9208336
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
9208300 |
tcaaggtctcaggttcgattccccctggtgccaattt |
9208336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 19638001 - 19637965
Alignment:
| Q |
20 |
ttctcgctggtgccaatttgagggagttagtttagct |
56 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
19638001 |
ttctctctggtgccaatttgagggggttagtttagct |
19637965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 24256842 - 24256783
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgaggga-gttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||| ||||||||||| |||||| |||||| ||| | ||||||||||||||||| |
|
|
| T |
24256842 |
tcaaggtctcaagttcgattctctctggtgtcaattt-aggtaggttagtttagcttcttc |
24256783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 22)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 26459430 - 26459371
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| |
|
|
| T |
26459430 |
tcaaggtctcaggttcgattctctctggtgccaatttgaaggggttagtttagcttcttc |
26459371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 39631900 - 39631959
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
39631900 |
tcaaggtctcaggttcgattctctcttgtgccaatttgagggggttagtttagcttcttc |
39631959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 29785321 - 29785263
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
29785321 |
tcaaggtctcatgttcgattctttctggtgccaatttgagggggttagtttagcttctt |
29785263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 37162370 - 37162312
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
37162370 |
tcaaggtctcaagttcgattctctctggtgccaatttgaggggattagtttagcttctt |
37162312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 43215240 - 43215298
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| |
|
|
| T |
43215240 |
tcaaggtctcaggttcgattctctcttatgccaatttgagggggttagtttagcttctt |
43215298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 2962515 - 2962574
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
2962515 |
tcaagatctcaggttcgattctctctggaaccaatttgagggagttagtttaacttcttc |
2962574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 17113851 - 17113910
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||| ||||||||||| ||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
17113851 |
tcaaggtctcaagttcgattctctctgatgctaatttgagggggttagtttagcttcttc |
17113910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 25655248 - 25655189
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
25655248 |
tcaaggtttcaggttcgattctctctggtgccaatttgaaggggttggtttagcttcttc |
25655189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 33222426 - 33222485
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||| | |||||||||| |||||| |
|
|
| T |
33222426 |
tcaaggtctcaggttcgattctctctggtgtcaatttgagagggttagtttagattcttc |
33222485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 7744132 - 7744074
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||| ||||||| ||||||| |||||||||| || ||||||||||||| |
|
|
| T |
7744132 |
tcaaggtctcaggtttgattctctctggtgcaaatttgagggggtcagtttagcttctt |
7744074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 29538582 - 29538524
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||| |||| |
|
|
| T |
29538582 |
tcaaggtctcaagttcgattctccctgatgccaatttgagtgagttagtttagcatctt |
29538524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 18363752 - 18363810
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||| ||||||| || || |||||||||||| ||||||||||||||||| |
|
|
| T |
18363752 |
tcaaggtctcaggtttgattctctctagtaccaatttgaggg-gttagtttagcttcttc |
18363810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 21558184 - 21558243
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| | | |||| |||||||||||| |
|
|
| T |
21558184 |
tcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc |
21558243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 9608649 - 9608590
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||||||||||||| || ||| |||||||||| ||| ||||||||||||| |
|
|
| T |
9608649 |
tcaagatctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc |
9608590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 9836221 - 9836162
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||||||||||||| || ||| |||||||||| ||| ||||||||||||| |
|
|
| T |
9836221 |
tcaagatctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc |
9836162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 21570052 - 21570001
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagttta |
53 |
Q |
| |
|
||||||||||| |||||||| || |||||| ||||||||||| ||||||||| |
|
|
| T |
21570052 |
tcaaggtctcaagttcgattttctctggtgtcaatttgagggggttagttta |
21570001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 33869465 - 33869418
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttag |
49 |
Q |
| |
|
|||||||||| |||||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
33869465 |
tcaaggtctctggttcgattctctctggtgtcaatttgagggggttag |
33869418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 31835248 - 31835306
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| | | | |||||||||||||| |
|
|
| T |
31835248 |
tcaaggtctcaggttcgattatccctggtgccaattttggcgggctagtttagcttctt |
31835306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 41907659 - 41907626
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
41907659 |
aggtctcaggttcgattctctctggtgccaattt |
41907626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 4566448 - 4566412
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
4566448 |
tcaaggtctcaggtttgattctctctggtgccaattt |
4566412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 28647021 - 28647057
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
28647021 |
tcaaggtctcaggttcgattccctctggtgccaattt |
28647057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 30579391 - 30579427
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| |
|
|
| T |
30579391 |
tcaaggtctcaggttcgattttctctggtgccaattt |
30579427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 30)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 4249233 - 4249292
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4249233 |
tcaaggtctcaggtttgattctctctggtgccaatttgagggggttagtttagcttcttc |
4249292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 15180794 - 15180853
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15180794 |
tcaaggtcttaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc |
15180853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 37109371 - 37109312
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||| |
|
|
| T |
37109371 |
tcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagtttcttc |
37109312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 38869824 - 38869883
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
38869824 |
tcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttcttc |
38869883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 6666446 - 6666387
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
6666446 |
tcaagatctcaggttcgattctctctggtgcccatttgagggggttagtttagcttcttc |
6666387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 7292818 - 7292759
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
7292818 |
tcaaagtctcaggttcgattctctctagtgccaatttgagggggttagtttagcttcttc |
7292759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 23378012 - 23378071
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||| |
|
|
| T |
23378012 |
tcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc |
23378071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 44195004 - 44194946
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
44195004 |
tcaaggtctcatgttcaattctctctggtgccaatttgagggagttagtttaacttctt |
44194946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 16581749 - 16581808
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||| ||| || |||||||||||||||| | ||||||||||||||||| |
|
|
| T |
16581749 |
tcaaggtctcaggttctattatctctggtgccaatttgagagggttagtttagcttcttc |
16581808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 2185052 - 2184994
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||| |||||||||||||||||| | | |||||||||||||| |||||||||||||||| |
|
|
| T |
2185052 |
tcaaagtctcaggttcgattctctccgatgccaatttgagggggttagtttagcttctt |
2184994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 19680808 - 19680750
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
19680808 |
tcaaggtcttaggttcgattctctctggtgccaatttaaggaggttagtttagcttctt |
19680750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 24991583 - 24991642
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||||| || || || | |||||||||||||||||||| ||||||| |
|
|
| T |
24991583 |
tcaaggtctcaggttcgattttctctagtactaatttgagggagttagtttaacttcttc |
24991642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 20770967 - 20771025
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||||||||| |||| |||| |||||| |
|
|
| T |
20770967 |
tcaaggtctcaagttcgattctctcaggtgccaatttgagggggttaatttaacttctt |
20771025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 33632156 - 33632098
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||| |||| ||||||||| |||||| ||||||||||| ||||||||| |||||| |
|
|
| T |
33632156 |
tcaaggtcccaggatcgattctctctggtgtcaatttgagggggttagtttaacttctt |
33632098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 46295153 - 46295211
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| | | | |||||||||||||| |
|
|
| T |
46295153 |
tcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt |
46295211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1730510 - 1730450
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||| |
|
|
| T |
1730510 |
ttcaaagtctcagattctattctctctggtgctaatttgaggggattagtttagcttcttc |
1730450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 2732050 - 2732109
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||| |||||||||||||||||| | |||||||||||| | | | ||||||||||||||| |
|
|
| T |
2732050 |
tcaaagtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc |
2732109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 7539646 - 7539704
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| || || ||||||||||| ||||||||| ||||||| |
|
|
| T |
7539646 |
tcaaggtctcaggttcgattctctcttctgtcaatttgaggg-gttagtttaacttcttc |
7539704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 31759678 - 31759619
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||| ||||||||| ||||| ||||||||| || |||||||||||||||| |
|
|
| T |
31759678 |
tcaaggtctcagattcgattctttctggtaccaatttgaagggattagtttagcttcttc |
31759619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 9517787 - 9517754
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
9517787 |
aggtctcaggttcgattctctctggtgccaattt |
9517754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 27372675 - 27372618
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||| |||||||||| || ||| ||||||||||| || |||| |||||||||||| |
|
|
| T |
27372675 |
aaggtcttaggttcgattatctctgatgccaatttgaaggggttaatttagcttcttc |
27372618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 34844904 - 34844871
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
34844904 |
aggtctcaggttcgattctctctggtgccaattt |
34844871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 40058998 - 40058965
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
40058998 |
aggtctcaggttcgattctctctggtgccaattt |
40058965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 49287909 - 49287942
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
49287909 |
aggtctcaggttcgattctctctggtgccaattt |
49287942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 50483071 - 50483120
Alignment:
| Q |
12 |
aggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||| || ||| |||||| |||| ||||||||||||||||| |
|
|
| T |
50483071 |
aggttcgattctctcttgtgacaatttcagggggttagtttagcttcttc |
50483120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 51622541 - 51622578
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttg |
39 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
51622541 |
tcaaggtctcaggttcgactctctctggtgccaatttg |
51622578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 56410006 - 56410039
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaa |
35 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |
|
|
| T |
56410006 |
tcaaggtctcaggttcgattctccctggtgccaa |
56410039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 5609347 - 5609315
Alignment:
| Q |
6 |
ggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
5609347 |
ggtctcaggttcgattctctctggtgccaattt |
5609315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 7949474 - 7949438
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
7949474 |
tcaaggtctcaggttcgattctctctggtgtcaattt |
7949438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 28635755 - 28635811
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||| | | | || |||||||||||| |
|
|
| T |
28635755 |
aggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttc |
28635811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 23)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28703425 - 28703366
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
28703425 |
ttcaaggtctcaggttcgattctctctggtgccaatttgaggaggttagtttagcttctt |
28703366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 30311362 - 30311421
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30311362 |
tcaaggtctcaggttcgattctctttggtgccaatttgagggggttagtttagcttcttc |
30311421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 10969936 - 10969878
Alignment:
| Q |
3 |
caaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
10969936 |
caaggtctcaggttcgattctctctggtgccaatttaagggggttagtttagcttcttc |
10969878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 15048081 - 15048023
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||| |
|
|
| T |
15048081 |
tcaaggtctcaggttcgattatctctggtgccaatttgagggggttagtttaacttctt |
15048023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 53413001 - 53413053
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttag |
54 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
53413001 |
tcaaggtctcaggttcaattctctctggtgccaatttgagggggttagtttag |
53413053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 34062568 - 34062509
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
34062568 |
tcaaggtctcaggttcaattctctctggtgccaatttgaggatgttagtttaacttcttc |
34062509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 46518684 - 46518743
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||| ||||||| ||||||| ||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
46518684 |
tcaaggtttcaggtttgattctctctgatgccaatttgagggggttagtttagcttcttc |
46518743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 37788485 - 37788428
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||| |||| ||||||||||| |
|
|
| T |
37788485 |
tcaaggtctcaggttcgattctctctagtgccaatttgaggg-gttaatttagcttctt |
37788428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 3427573 - 3427515
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||| |||||||||| || |||||||||||| | |||||||||||||||||| |
|
|
| T |
3427573 |
tcaaggtctcagattcgattctctctagtgccaatttga-gcagttagtttagcttcttc |
3427515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 27093381 - 27093323
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
27093381 |
tcaaggtctcaggtttgattctctctggtgccaatttgaagg-gttagtttatcttcttc |
27093323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10445156 - 10445100
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| | | || |||||||||||| |
|
|
| T |
10445156 |
aggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttcttc |
10445100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 34622561 - 34622502
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||||| || |||||| ||||||||| | |||||||| ||||||| |
|
|
| T |
34622561 |
tcaaggtctcaggttcgattttctctggtgtcaatttgagaaacttagtttaacttcttc |
34622502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 46552987 - 46553046
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||| |||||||||| || ||||||||||| | | |||||||||| |||||| |
|
|
| T |
46552987 |
tcaaggtctcagattcgattctctctagtgccaatttgggtgggttagtttagtttcttc |
46553046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 37051309 - 37051255
Alignment:
| Q |
7 |
gtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||| || | || ||||||||| ||||||||||||||||| |
|
|
| T |
37051309 |
gtctcaggttcgattctctcttgcaccgatttgagggggttagtttagcttcttc |
37051255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 40063677 - 40063735
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggag-ttagtttagcttcttc |
61 |
Q |
| |
|
||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||||| |
|
|
| T |
40063677 |
aaggtctcaagttcgattctctccagtgccaatttgagggggtttagtttagcttcttc |
40063735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 2709443 - 2709492
Alignment:
| Q |
12 |
aggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||| ||| |||||||||| | ||||||||||||||||||| |
|
|
| T |
2709443 |
aggtttgattctctctgatgccaatttgggtgagttagtttagcttcttc |
2709492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 7975499 - 7975540
Alignment:
| Q |
20 |
ttctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
7975499 |
ttctctctggtgccaatttgagggggttagtttaccttcttc |
7975540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 20501754 - 20501810
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||| | || |||||||||||| |
|
|
| T |
20501754 |
aaggtctcaggttcgattctctccagtgccaatttgaggg-gctaatttagcttcttc |
20501810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 40268546 - 40268603
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||| | | ||||||||| | | ||||||||||||||||| |
|
|
| T |
40268546 |
aaggtctcaggttcgattctccccgatgccaatttcggtgggttagtttagcttcttc |
40268603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 10828751 - 10828695
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||||||||| || || |||||||||||||| ||||| |||| ||||| |
|
|
| T |
10828751 |
aaggtctcaggttcgattatctatgatgccaatttgagggggttaggttagtttctt |
10828695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 15034400 - 15034436
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
15034400 |
tcaaggtctcaggttcaattctccctggtgccaattt |
15034436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 16354908 - 16354855
Alignment:
| Q |
6 |
ggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||| |||||||||| || ||| | ||||||||||||||| |
|
|
| T |
16354908 |
ggtctcaggttcgattctctctggtgccaaattaagg--ggtagtttagcttcttc |
16354855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 27259220 - 27259276
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||| ||||||| ||||||| ||| || ||||||||||| |||||||| |||||||| |
|
|
| T |
27259220 |
aggtttcaggtttgattctctctgatgtcaatttgagggggttagttttgcttcttc |
27259276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 42922473 - 42922529
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| |
|
|
| T |
42922473 |
aaggtctcaggttcgattctctctggtgccaatttgatggggttagtttagcttctt |
42922529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 2750646 - 2750587
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
2750646 |
tcaaggtctcatgttcgattctctctagtgccaatttgagggggttagtttagcttcttc |
2750587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 4060234 - 4060175
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
4060234 |
tcaagatctcaggttcgattctctctggtgtcaatttgagggggttagtttagcttcttc |
4060175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 34041608 - 34041549
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34041608 |
tcaaggtctcaggtttgattccctctggtgccaatttgagggggttagtttagcttcttc |
34041549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 45026799 - 45026856
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttct |
59 |
Q |
| |
|
||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
45026799 |
tcaaggtctcatgtttgattctctctggtgccaatttgagggggttagtttagcttct |
45026856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 40416408 - 40416352
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||| |
|
|
| T |
40416408 |
aaggtctcaggttcgattctctctggtgccaatttgaaggggttagtttagattctt |
40416352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 14500336 - 14500391
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
14500336 |
aggtctcagattcgattctctctggtgccaatttgagggggatagtttagcttctt |
14500391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 30410569 - 30410510
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||| |||| |||||||| || |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30410569 |
tcaaggactcatgttcgattttctctggtgccaatttgagggggttagtttagcttcttc |
30410510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13803551 - 13803609
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||||||||||| || ||| |||||||||||||| ||||||||| |||||| |
|
|
| T |
13803551 |
tcaaggtctcaggttcgattatctctgatgccaatttgagggggttagtttaccttctt |
13803609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 21304012 - 21303955
Alignment:
| Q |
4 |
aaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||| ||||||||||||||| |||||| ||||||||||| |||| |||||||||||| |
|
|
| T |
21304012 |
aaggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttcttc |
21303955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 11062416 - 11062474
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||| ||||||| || ||| |||||||| |||||||||||||||||||| |
|
|
| T |
11062416 |
tcaaggtctcaggtttgattctctcttgtgtcaatttga-ggagttagtttagcttcttc |
11062474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 19244166 - 19244204
Alignment:
| Q |
3 |
caaggtctcaggttcgattctcgctggtgccaatttgag |
41 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19244166 |
caaggtctcaggttcgattctctctggtgccaatttgag |
19244204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19322823 - 19322883
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||| |||| ||||||| || |||||||||||||| ||||||||| ||||||| |
|
|
| T |
19322823 |
ttcaaggtctctggtttgattctctctagtgccaatttgaggaggttagtttaacttcttc |
19322883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 4438999 - 4438940
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||| || |||||||||| ||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
4438999 |
tcaaggtcgcatgttcgattctttctggtaccaatttgagagggttagtttagcttcttc |
4438940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14780561 - 14780621
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||||| ||| | | |||||||||||| | | || |||||||||||| |
|
|
| T |
14780561 |
ttcaaggtctcaggttcgatcctccccgatgccaatttgagtgggctaatttagcttcttc |
14780621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 16525233 - 16525269
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
16525233 |
tcaaggtctcaggttcgattctccccggtgccaattt |
16525269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 26176346 - 26176310
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
26176346 |
tcaaggtctcagattcgattctccctggtgccaattt |
26176310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 18540354 - 18540413
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||| |
|
|
| T |
18540354 |
tcaaggtctcaggttcgattctctctggtgccaatttgagagggttaatttagcttcttc |
18540413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 33017270 - 33017328
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
33017270 |
tcaaggtctcaggttcgattctctctggtgccaatttgaggg-gttagtttaacttcttc |
33017328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 42740550 - 42740606
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttc |
58 |
Q |
| |
|
|||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
42740550 |
tcaaggtctcaggttcaattctctctggtgtcaatttaagggagttagtttagcttc |
42740606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 12988484 - 12988542
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12988484 |
tcaaggtttcaggttcgatcctctctggtgccaatttgaggg-gttagtttagcttcttc |
12988542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 8059688 - 8059747
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||| |||||| ||| || ||||||||| ||| ||||||||||||||| |
|
|
| T |
8059688 |
tcaaggtctcaggttccattctccctgatgtcaatttgagtgagctagtttagcttcttc |
8059747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 29956399 - 29956357
Alignment:
| Q |
19 |
attctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29956399 |
attctctctggtgccaatttgagggggttagtttagcttcttc |
29956357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 6536576 - 6536635
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||| | | |||| |||||||||||| |
|
|
| T |
6536576 |
tcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc |
6536635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 6569788 - 6569733
Alignment:
| Q |
5 |
aggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||| ||| ||||||||||| ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
6569788 |
aggtttcatgttcgattctctttggtgtcaatttgagggggttagtttagcttctt |
6569733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 8794361 - 8794307
Alignment:
| Q |
6 |
ggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||| |||| |||| |||||||||||| |
|
|
| T |
8794361 |
ggtctcaggttcgattctctctggtaccaatttaaggg-gttaatttagcttcttc |
8794307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 16317671 - 16317725
Alignment:
| Q |
7 |
gtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||| || | | ||||||||||||||| |
|
|
| T |
16317671 |
gtctcatgttcgattctctctggtgccaatttcagtgggctagtttagcttcttc |
16317725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 3174825 - 3174788
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttg |
39 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
3174825 |
tcaaggtctcaggttcgattctctctggtgtcaatttg |
3174788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 13129724 - 13129761
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttg |
39 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
13129724 |
tcaaggtttcaggttcgattctctctggtgccaatttg |
13129761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 35690084 - 35690048
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
35690084 |
tcaaggtctcaggttcgattctctctggtgtcaattt |
35690048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 7918489 - 7918430
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
7918489 |
tcaaggtcttaggttcgattctctctggtgccaatttgaggggtttagtttagcttcttc |
7918430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 25627113 - 25627171
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
25627113 |
tcaaggtctcaggttcgattctctctggtgtcaatttgaggg-gttagtttagcttcttc |
25627171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 37258386 - 37258328
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
37258386 |
tcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt |
37258328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 14285217 - 14285266
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtt |
51 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
14285217 |
tcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtt |
14285266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34984862 - 34984918
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttc |
58 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||| |
|
|
| T |
34984862 |
tcaaggtcttaggttcgattctctctggtgccaatttgagggggttggtttagcttc |
34984918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 18596021 - 18595966
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagctt |
57 |
Q |
| |
|
||||||||| |||||||||| || |||||||||||||||||| ||||||||||||| |
|
|
| T |
18596021 |
tcaaggtcttaggttcgattttctctggtgccaatttgagggggttagtttagctt |
18595966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 18974016 - 18974071
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagctt |
57 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||| | ||||||||||||| |
|
|
| T |
18974016 |
tcaaggtgtcaggttcgattctccctggtgccaatttgagtgggttagtttagctt |
18974071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26078072 - 26078025
Alignment:
| Q |
1 |
ttcaaggtctcaggttcgattctcgctggtgccaatttgagggagtta |
48 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
26078072 |
ttcaaggtctcaggttcgattctctctagtgccaatttgagggggtta |
26078025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 31074288 - 31074346
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||| || | ||||||||||||||| |
|
|
| T |
31074288 |
tcaagatctcaggttcgattctctctggtgccaatttaagaggattagtttagcttctt |
31074346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 19043514 - 19043572
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||| ||||||||||| || ||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
19043514 |
tcaaagtctcaggttcaatcctctctagtgccaatttgaggg-gttagtttagcttcttc |
19043572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 21549152 - 21549099
Alignment:
| Q |
7 |
gtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||| |||||||| || || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
21549152 |
gtctcaagttcgattttctctagtgccaatttgaggg-gttagtttagcttcttc |
21549099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 25979226 - 25979284
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||| || |||| ||||||||||| |
|
|
| T |
25979226 |
tcaaggtctcaggttcgattctctcttatgtcaatttgatggggttaatttagcttctt |
25979284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 3315271 - 3315307
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaattt |
38 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
3315271 |
tcaaggtctcaggttcgattctcccaggtgccaattt |
3315307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 81584 - 81526
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||| |
|
|
| T |
81584 |
tcaaggtctcagattcgattctccctgatgccaatttgagggagttagtttaacttctt |
81526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0180
Description:
Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 19982 - 19928
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagctt |
57 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| |
|
|
| T |
19982 |
tcaaggtctcaggttcgattctctctggtgttaatttgaggg-gttagtttagctt |
19928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0238 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0238
Description:
Target: scaffold0238; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 2731 - 2673
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| | | || ||||||||||| |
|
|
| T |
2731 |
tcaaggtctcaggttcgattctctctggtgccaatttgaagaggctaatttagcttctt |
2673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0126 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 25367 - 25308
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||||| || |||||| |||||||| ||| || |||||||||||| |
|
|
| T |
25367 |
tcaaggtctcaggttcgattatctctggtgtcaatttgaatgagctattttagcttcttc |
25308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 94991 - 94935
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
94991 |
tcaaggtctcaggttcaattatctctggtgccaatttaagg--gttagtttagcttctt |
94935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 42535 - 42482
Alignment:
| Q |
7 |
gtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttcttc |
61 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| |||| |||||||||||| |
|
|
| T |
42535 |
gtctcaggttcgattctctttggtgccaatttaaggg-gttaatttagcttcttc |
42482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 35409 - 35351
Alignment:
| Q |
2 |
tcaaggtctcaggttcgattctcgctggtgccaatttgagggagttagtttagcttctt |
60 |
Q |
| |
|
||||||||| | |||||||| || ||| |||||||||||||| ||| |||||||||||| |
|
|
| T |
35409 |
tcaaggtcttaagttcgattatctctgatgccaatttgagggggttggtttagcttctt |
35351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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