View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11314_high_2 (Length: 288)
Name: NF11314_high_2
Description: NF11314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11314_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 7904070 - 7904350
Alignment:
| Q |
1 |
atgattcatatcaagaagaaatttatatgaattgaatgaataaaaggagaagaggttacaaggaggtttatatagctccctctgtcattacagttacagc |
100 |
Q |
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| T |
7904070 |
atgattcatatcaagaagaaatttatatgaattgaatgaataaaaggagaagaggttacaaggaggtttatatagctccctctgtcattacagttacagc |
7904169 |
T |
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| Q |
101 |
tgatatgaatagttctttctaatttggatccactaacaagtggctatgtaaactcagctgatgttggtaagtactgtgctgactcagctagtgtgacta- |
199 |
Q |
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| T |
7904170 |
tgatatgaatagttctttctaatttggatccactaacaagtggctatgtaaactcagctgatgttggtaagtactgtgctgactcagctagtgtgactat |
7904269 |
T |
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| Q |
200 |
----ttacccccctcaagctggaggttgaaaaatattgatcaaacccagcttggaaatatgatcgtggatgtggaatatga |
276 |
Q |
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| T |
7904270 |
taccttacccctctcaagctggaggttgaaaaatattgatcaatcccagcttggaaatatgatcgtggatgtggactatga |
7904350 |
T |
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