View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11315_high_11 (Length: 230)

Name: NF11315_high_11
Description: NF11315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11315_high_11
NF11315_high_11
[»] chr7 (4 HSPs)
chr7 (119-215)||(30859938-30860034)
chr7 (1-59)||(432913-432971)
chr7 (1-53)||(31877432-31877484)
chr7 (1-53)||(36653285-36653337)
[»] chr8 (4 HSPs)
chr8 (117-215)||(27518193-27518298)
chr8 (1-84)||(3194533-3194616)
chr8 (2-59)||(24994555-24994612)
chr8 (29-70)||(7130138-7130179)
[»] chr4 (8 HSPs)
chr4 (1-84)||(11660999-11661083)
chr4 (130-215)||(36153551-36153634)
chr4 (25-82)||(23266725-23266782)
chr4 (9-70)||(39834096-39834157)
chr4 (1-56)||(11660831-11660886)
chr4 (1-68)||(21283806-21283873)
chr4 (25-84)||(20394127-20394186)
chr4 (1-59)||(41099119-41099177)
[»] chr6 (4 HSPs)
chr6 (1-78)||(32879625-32879702)
chr6 (2-68)||(9929603-9929669)
chr6 (1-62)||(4410214-4410275)
chr6 (164-204)||(31779360-31779398)
[»] chr1 (2 HSPs)
chr1 (1-78)||(28485886-28485963)
chr1 (1-78)||(46090208-46090284)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-70)||(36235-36304)
scaffold0012 (117-168)||(36101-36152)
[»] chr3 (5 HSPs)
chr3 (1-84)||(7789899-7789983)
chr3 (1-84)||(51170996-51171080)
chr3 (1-78)||(25226813-25226891)
chr3 (2-59)||(46183011-46183068)
chr3 (25-77)||(25227321-25227373)
[»] chr5 (3 HSPs)
chr5 (1-84)||(43275588-43275671)
chr5 (25-84)||(43276078-43276137)
chr5 (29-70)||(14410244-14410285)
[»] chr2 (3 HSPs)
chr2 (1-68)||(6401770-6401837)
chr2 (1-68)||(31116233-31116300)
chr2 (164-206)||(44158399-44158439)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-59)||(185448-185506)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-42)||(28611-28652)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 30859938 - 30860034
Alignment:
Q  119 tggtttcaaaatttcaaaagtgaaattagcattctgtgtatgttggaagcagccaagcaaggcacatatgggagccaaagtgaagtgagggagaata 215  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30859938 tggtttcaaaatttcaaaagtggaattaacattctgtgtatgttggaagcagccaagcaaggcacatatgggagccaaagtgaagtgagggagaata 30860034  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 432971 - 432913
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgca 59  Q
    ||||||||||||||||||||||  ||| |||||||||||  ||| ||||||||||||||    
T  432971 ctaacgcaagtgtaaaattatgcgttagttaactaacgcgacgtgacttaagtcacgca 432913  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31877432 - 31877484
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagt 53  Q
    ||||||||||||||||||||||  ||| |||||||||||| | | ||||||||    
T  31877432 ctaacgcaagtgtaaaattatgcgttagttaactaacgcaacatgacttaagt 31877484  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36653285 - 36653337
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagt 53  Q
    ||||||||||||||||||| ||| ||| ||||||||| |||||| | ||||||    
T  36653285 ctaacgcaagtgtaaaattgtgtgttagttaactaacacagcgtgatttaagt 36653337  T

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Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 27518193 - 27518298
Alignment:
Q  117 gctggtttcaaaatttcaaaagtgaaattagcattctgtgtatgttgg-------aagcagccaagcaaggcacatatgggagccaaagtgaagtgaggg 209  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  27518193 gctggtttcaaaatttcaaatgtggaattagcattctgttaatgttggaacttggaagcagccaagcaaggcacatatgggagccaaagtgaagtgaggg 27518292  T
Q  210 agaata 215  Q
    ||||||    
T  27518293 agaata 27518298  T

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Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3194616 - 3194533
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccattttttacactt 84  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||    
T  3194616 ctaacgcaagtataaaattatgcattacttaactaacgcaacgtgacttaagtcacacacgtgtaaaaaccattttttacactt 3194533  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 24994612 - 24994555
Alignment:
Q  2 taacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgca 59  Q
    |||||||||||| || || || ||||||||||||||||| ||| ||||||||||||||    
T  24994612 taacgcaagtgttaatttctgcattacttaactaacgcaacgtgacttaagtcacgca 24994555  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 7130179 - 7130138
Alignment:
Q  29 ttaactaacgcagcgtaacttaagtcacgcacgtataaaaac 70  Q
    |||||| ||||||||| |||||||||||||| ||||||||||    
T  7130179 ttaactcacgcagcgtgacttaagtcacgcatgtataaaaac 7130138  T

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Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11661083 - 11660999
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaacc-attttttacactt 84  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||    
T  11661083 ctaacgcaagtgtaaaattatgcgttacttaactaacgcagcgtgacttaagtcatgcacgtgtaaaaaccgattttttacactt 11660999  T

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Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 36153551 - 36153634
Alignment:
Q  130 tttcaaaagtgaaattagcattctgtgtatgttggaagcagccaagcaaggcacatatgggagccaaagtgaagtgagggagaata 215  Q
    ||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  36153551 tttcaaaagtggaattaacattccgtgtatgtcagaagcagccaagcaaggcac--atgggagccaaagggaagtgagggagaata 36153634  T

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Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 23266782 - 23266725
Alignment:
Q  25 ttacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccattttttacac 82  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  23266782 ttacttaactaacgcagcgtgacttaagtcacgcacctgtaaaaaccattttttacac 23266725  T

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Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 39834096 - 39834157
Alignment:
Q  9 agtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaac 70  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| |||| | |||||||    
T  39834096 agtgtaaaattatgcgttacttaactaacgcagcgtaacttaagtcaagcacctgtaaaaac 39834157  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11660831 - 11660886
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcac 56  Q
    ||||||||||||||||||||||| |||||||||||||||| | | |||||||||||    
T  11660831 ctaacgcaagtgtaaaattatgtgttacttaactaacgcaacatgacttaagtcac 11660886  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21283806 - 21283873
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaa 68  Q
    ||||||||||||||||| ||||| ||| ||||||||||| |||| |||||||| ||||| || |||||    
T  21283806 ctaacgcaagtgtaaaactatgtgttagttaactaacgctgcgttacttaagtaacgcatgtgtaaaa 21283873  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 20394186 - 20394127
Alignment:
Q  25 ttacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccattttttacactt 84  Q
    ||||||||||||| |||||| ||||||||| | ||| | |||||||| ||||||||||||    
T  20394186 ttacttaactaacacagcgtgacttaagtcgcacacctgtaaaaaccgttttttacactt 20394127  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41099177 - 41099119
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgca 59  Q
    ||||||||| ||||||||  ||| ||| |||||||||||| ||||| ||||||||||||    
T  41099177 ctaacgcaaatgtaaaatagtgtgttagttaactaacgcaacgtaatttaagtcacgca 41099119  T

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Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32879625 - 32879702
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccatttttt 78  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  ||||| |||||||| ||||||    
T  32879625 ctaacgcaagtgtaaaattatgtgttacttaactaacgcagcgtgacttaagtcaaacacgtgtaaaaaccgtttttt 32879702  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 9929603 - 9929669
Alignment:
Q  2 taacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaa 68  Q
    |||||||||||||||| ||||| ||| ||||||||||| |||| |||||||| ||||| || |||||    
T  9929603 taacgcaagtgtaaaactatgtgttagttaactaacgctgcgttacttaagtaacgcatgtgtaaaa 9929669  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4410275 - 4410214
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgt 62  Q
    ||||||||||||||||| ||||||||| ||||||||||| | || |||||||| ||| ||||    
T  4410275 ctaacgcaagtgtaaaactatgtattagttaactaacgctgtgtcacttaagtaacgtacgt 4410214  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 31779398 - 31779360
Alignment:
Q  164 gaagcagccaagcaaggcacatatgggagccaaagtgaagt 204  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  31779398 gaagcagccaagcaaggcac--atgggagccaaagtgaagt 31779360  T

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Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28485886 - 28485963
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccatttttt 78  Q
    |||| |||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  28485886 ctaatgcaagtgtaaaattatgcgttacttaactaatgcagcgtgacttaagtcacgcacgtgtaaaaaccatttttt 28485963  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46090208 - 46090284
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccatttttt 78  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  46090208 ctaacacaagtgtaaaattatgtgttacttaactaacgcagcgtgac-taagtcacgcacgtgtaaaaaccatttttt 46090284  T

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Target: scaffold0012 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36304 - 36235
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaac 70  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| |||||||    
T  36304 ctaacgcaagtgtaaaattatgcgttacttaactaacgcagcgtgacttaagtcacacacgtgtaaaaac 36235  T

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Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 36152 - 36101
Alignment:
Q  117 gctggtttcaaaatttcaaaagtgaaattagcattctgtgtatgttggaagc 168  Q
    ||||||||||||||||| |||||| ||||| |||| ||||||||||||||||    
T  36152 gctggtttcaaaatttcgaaagtggaattaacattgtgtgtatgttggaagc 36101  T

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Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7789983 - 7789899
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccattt-tttacactt 84  Q
    |||||||| |||||||||||||  ||||||||||||||||| || ||||||||||||||||| |||||||| ||| |||||||||    
T  7789983 ctaacgcaggtgtaaaattatgcgttacttaactaacgcagtgtgacttaagtcacgcacgtgtaaaaaccgtttatttacactt 7789899  T

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Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 51170996 - 51171080
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaacc-attttttacactt 84  Q
    |||| |||||||||||||||||  |||||||||||||| | ||||||||||||||||||||| ||||||||  ||||||||||||    
T  51170996 ctaatgcaagtgtaaaattatgcgttacttaactaacgtaacgtaacttaagtcacgcacgtgtaaaaaccgcttttttacactt 51171080  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25226813 - 25226891
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaact-aacgcagcgtaacttaagtcacgcacgtataaaaaccatttttt 78  Q
    |||||||||||||||||||||   |||||||||| ||| |||||||| ||||||||| ||||| |||||||| ||||||    
T  25226813 ctaacgcaagtgtaaaattatacgttacttaactaaacacagcgtaatttaagtcacacacgtgtaaaaaccgtttttt 25226891  T

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Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 46183011 - 46183068
Alignment:
Q  2 taacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgca 59  Q
    |||||||||||||||||||||  ||| ||||||||||| |||| ||||||||||||||    
T  46183011 taacgcaagtgtaaaattatgcgttagttaactaacgcggcgtgacttaagtcacgca 46183068  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 25227373 - 25227321
Alignment:
Q  25 ttacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccattttt 77  Q
    ||||||||||||||||||||||||||||||||  || | |||||||| |||||    
T  25227373 ttacttaactaacgcagcgtaacttaagtcacatacctgtaaaaaccgttttt 25227321  T

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Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43275588 - 43275671
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccattttttacactt 84  Q
    ||||||||||  ||||||||| |  ||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||    
T  43275588 ctaacgcaaggataaaattatatgctacttaactaacgcagcatgacttaaatcacgcacgtataaaaaccgttttttacactt 43275671  T

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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 43276137 - 43276078
Alignment:
Q  25 ttacttaactaacgcagcgtaacttaagtcacgcacgtataaaaaccattttttacactt 84  Q
    |||||||||||||||||||||||||||||||||  | | |||||||||||| ||||||||    
T  43276137 ttacttaactaacgcagcgtaacttaagtcacgtgcctgtaaaaaccatttgttacactt 43276078  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 14410285 - 14410244
Alignment:
Q  29 ttaactaacgcagcgtaacttaagtcacgcacgtataaaaac 70  Q
    |||||| ||||||||| |||||||||||||| ||||||||||    
T  14410285 ttaactcacgcagcgtgacttaagtcacgcatgtataaaaac 14410244  T

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Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6401770 - 6401837
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaa 68  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||| |||||||| ||||| || |||||    
T  6401770 ctaacgcaagtataaaattatgtgttagttaactaacgcagcgtgacttaagtaacgcaagtgtaaaa 6401837  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31116233 - 31116300
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgcacgtataaaa 68  Q
    |||||||||||||||| |||||| ||| ||||||||||  |||| |||||||| ||||| ||||||||    
T  31116233 ctaacgcaagtgtaaatttatgtgttagttaactaacgttgcgtcacttaagtaacgcaagtataaaa 31116300  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 44158399 - 44158439
Alignment:
Q  164 gaagcagccaagcaaggcacatatgggagccaaagtgaagtga 206  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  44158399 gaagcagccaagcaaggcac--atgggagccaaagtgaagtga 44158439  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 185448 - 185506
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagcgtaacttaagtcacgca 59  Q
    ||||||||||||||||| ||||  ||| ||||||||||| |||| |||||||| |||||    
T  185448 ctaacgcaagtgtaaaactatgcgttagttaactaacgctgcgttacttaagtaacgca 185506  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28611 - 28652
Alignment:
Q  1 ctaacgcaagtgtaaaattatgtattacttaactaacgcagc 42  Q
    ||||||||||||||||||||||  ||| ||||||||||||||    
T  28611 ctaacgcaagtgtaaaattatgcgttagttaactaacgcagc 28652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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