View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11321_low_9 (Length: 298)
Name: NF11321_low_9
Description: NF11321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11321_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 42247211 - 42247479
Alignment:
| Q |
13 |
cataggcctaaagatcaagggaacaattatgggcccttgatacccaaagttctagtttacaatcagttaaataaatagaatgaccttatacataactttt |
112 |
Q |
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| T |
42247211 |
cataggcctaaagatcaagggaacaattatgggcccttgatacccaaagttctagtttacaatcagttaaataaatagaatgaccttatacataactttt |
42247310 |
T |
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| Q |
113 |
tctaaagctttgacatgtacaaatgcctatacttcagggtttcatcaacagctccttgatgtaattaagaactccctcgacattcacagtccaagcaact |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
42247311 |
tctaaagctttgacatgtacaaatgcctatacttcagggtttcatcaacagctccttgatgtaactaagaactccctcgacattcacagtccaagcaact |
42247410 |
T |
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| Q |
213 |
gaaataggagaataacccgtccatgggttgctactattccatctgtatgaaatgaaacccaattatgtt |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42247411 |
gaaataggagaataacccgtccatgggttgctactattccatctgtatgaaatgaaacccaattatgtt |
42247479 |
T |
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