View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11323_low_1 (Length: 673)
Name: NF11323_low_1
Description: NF11323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11323_low_1 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
| [»] scaffold0552 (1 HSPs) |
| | |
|
| [»] scaffold0813 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 524; Significance: 0; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 524; E-Value: 0
Query Start/End: Original strand, 19 - 663
Target Start/End: Original strand, 4124015 - 4124659
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
4124015 |
taaacatcccgatagaatgagagttttcagagatttcaacgaataaatgtttcttggaaggttagaaaggctagtacaatctttcaaatttatcaaaaga |
4124114 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
| |||||| ||||||||||| | ||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4124115 |
actttcttaagatgtccaattgtatgggatacctcagacagccttggacaatctttgagtaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
4124214 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaacttgcggataaagcataa |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4124215 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaacttgcggataaagcataa |
4124314 |
T |
|
| Q |
319 |
aaagataagtacaagcacgtacgacgtgtcaccaaccttgagagtggtaataaaatatttgtgtgggtgcatagccannnnnnnaataccaacatacgtt |
418 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
4124315 |
aaagagaagtacaagcacgtacgacgtgtcgccaaccttgagagtggtaataaaatatttgtgtgagtgcatagccatttttttaataccaacatacgtt |
4124414 |
T |
|
| Q |
419 |
ggtttagtattactttttgctcaaaatattcgggtgccagcattctgctgtgaattttaaaattcagcataatagataggtttgaaattcctctggtttc |
518 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4124415 |
agtttagtattactttttgctcaaaatattcgggtgccagcattctgctgtgaattttaaaattcagcataatagataggtttgaaattcctctggtttc |
4124514 |
T |
|
| Q |
519 |
ttttatttactgtgttgatttatggactgatgtgtgaattttgtttgtacttgtatacattgtaactaaattcatagttagggctatgatggatcttttg |
618 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4124515 |
ttttatttactgtgttgatttatggactgttatgtgaattttgtttgtacttatatacattgtaactaaattcatagttagggctatgatggatcttttg |
4124614 |
T |
|
| Q |
619 |
tattataatcgaactattcatagttttcaactgttttgtcctttg |
663 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
4124615 |
tattataatcaaattattcatagttttcaactgttttgtcctttg |
4124659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 4344651 - 4344377
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| |
|
|
| T |
4344651 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatttttcaaatttatcaaaaga |
4344552 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||| || ||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
4344551 |
attttgttgagatgtccaatactttgggaaatctcagacagccttggacaatctttgagtactagcttttcaagattaggcaagtatgaaaagtcaggcg |
4344452 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
293 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
4344451 |
tctgtgtcagacaatgagaatgactgagattgagaattttcagctgatccatcctctgcaagaacggaaatatta |
4344377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 21 - 293
Target Start/End: Complemental strand, 4361080 - 4360808
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
4361080 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaat |
4360981 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| || || ||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
4360980 |
tttcttgagatgtccaatactttgggaaatctcagacagccttggacaatctttaagtactagcttttcaagattaggcaagtatgaaaagtcaggcgtc |
4360881 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
293 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||| | ||| || |||| |||||||| |
|
|
| T |
4360880 |
tgtgtcagatattgagaatgactaagattgagaattttcagctgctccatcccctgaaataacataaatatta |
4360808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 297
Target Start/End: Complemental strand, 4335350 - 4335071
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |
|
|
| T |
4335350 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
4335251 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
| |||||| ||||||||||| | ||||| |||||||||||||||||||| |||||||| || || |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
4335250 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
4335151 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaag-aacagaaatattataga |
297 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
4335150 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattataga |
4335071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 315
Target Start/End: Original strand, 4320695 - 4320991
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| | |
|
|
| T |
4320695 |
taaacatcccgatagaatgagagtattcagagttttcaacgtatagatgtttcttggaaggctacaaaggctaatacaatctttcaaatttatcaaaaca |
4320794 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
| ||| |||||||||||||| || |||||||||| ||||||||| || || |||| |||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4320795 |
acttttttgagatgtccaatgctatgggaaacctgagacagccttgggcaatcttcgagcactagcttttcaagattaggcaagtatgaaaagtcagggg |
4320894 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaacttgcggataaagca |
315 |
Q |
| |
|
||||||||| || |||||||||||||||||| ||||| |||||||||||||| |||||||| || | ||||||||||||||| || ||||||||||| |
|
|
| T |
4320895 |
tctgtgtcaaatgatgagaatgactaagatttagaatcttcagctgctccatcctctgcaaaaataaaaatattatagagaagttacggataaagca |
4320991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 19 - 294
Target Start/End: Original strand, 4133499 - 4133774
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| ||||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||| || |||| |||||||||||||| | ||| |
|
|
| T |
4133499 |
taaacagccagaaagaataagagttttcagagatttcaacgaatagatggttcttggaaggttacgaaggctagtacagtctttcaaatttataatgaga |
4133598 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
| ||| | |||||| ||||| | |||||||||||||||||||| ||||| |||||||| | || ||||| || ||||||| || |||||| || |||| |
|
|
| T |
4133599 |
actttatggagatgaccaatggtatgggaaacctcagacagccttggacaatctttgagtattagtttttctagattaggcatgtgtgaaaaatctgggg |
4133698 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattat |
294 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||| ||| || | ||||| ||||||||||||| |||| |||| |
|
|
| T |
4133699 |
tctgtactagacaatgagaatgactaagattgagaaattttagattctccagcctctgcaagaacaaaaatgttat |
4133774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 258
Target Start/End: Complemental strand, 6728409 - 6728172
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
||||||| || ||||| | ||||| |||||||| ||| | ||||||||||||||||| || | ||||| || ||| |||||||||||| |||||| |
|
|
| T |
6728409 |
aacatcctgaaagaatcaaagtttctagagattttaacttgtagatgtttcttggaagtttccgaagacctgcgcagtctctcaaatttatcagaagaat |
6728310 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| | ||| |||||| |||||||| ||| ||||| || ||||||| ||||||||| ||||||||||| ||||| ||||| |||||||| ||||| |
|
|
| T |
6728309 |
tttttgtagagatccaatgctttgggagaccgtagacaaacttggacagtttttgagcacgagcttttcaagattaggtaagtaggaaaagtctggggtt |
6728210 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
| |||| || |||||||||||||||| |||||||| |
|
|
| T |
6728209 |
tcagtcaaatccagagaatgactaagattaagaatttt |
6728172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 6675625 - 6675469
Alignment:
| Q |
102 |
tcaaatttatcaaaagaattttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaa |
201 |
Q |
| |
|
|||||||||||| ||||| || | |||| |||||| || ||||| ||| ||||| || |||||||||||||||||||||||||||| || ||||| |
|
|
| T |
6675625 |
tcaaatttatcataagaagcttatggagagatccaatgctatgggagaccgtagacaaacttggacagtctttgagcaccagcttttcaatattgggcaa |
6675526 |
T |
|
| Q |
202 |
gtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
|||||||||||| ||||| | | || || ||||||||||||||||| |||||||| |
|
|
| T |
6675525 |
gtatgaaaagtctggggtttcagccaaattttgagaatgactaagattaagaatttt |
6675469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 258
Target Start/End: Original strand, 6621585 - 6621822
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
||||||| || ||||| | ||||| |||||||| || |||||||| |||||||||| |||| ||||| || || ||| |||||||||| | |||| |
|
|
| T |
6621585 |
aacatcctgaaagaattaaagtttctagagattttaatttatagatgcttcttggaagtttacgaagacgtatgcagtctgtcaaatttataaggagaag |
6621684 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| | |||| |||||| || ||||| || ||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| || ||||| |
|
|
| T |
6621685 |
tttatggagagatccaatgctatgggagactgtagacaaacttggacagtctttgagcactagcttttcgagattaggcatgtatgaaaaatctggggtt |
6621784 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
| |||| || ||||||||||||||| |||||||| |
|
|
| T |
6621785 |
tcagtcaaatccaaagaatgactaagattaagaatttt |
6621822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 261
Target Start/End: Complemental strand, 6758584 - 6758487
Alignment:
| Q |
164 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcag |
261 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||| ||||| |||||||| ||| | | |||| || |||||||||||||||| ||||||||||| |
|
|
| T |
6758584 |
ggacagtttttgagcaccagcttttcaagattaggaaagtaggaaaagtctgggcttttagtcaaatccagagaatgactaagattaagaattttcag |
6758487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 533 - 633
Target Start/End: Complemental strand, 4360150 - 4360050
Alignment:
| Q |
533 |
ttgatttatggactgatgtgtgaattttgtttgtacttgtatacattgtaactaaattcatagttagggctatgatggatcttttgtattataatcgaac |
632 |
Q |
| |
|
|||||||||| ||| | |||| ||||||||| |||| |||||||||||| |||||||| ||||||| ||||||||||||| |||| ||||||| ||| |
|
|
| T |
4360150 |
ttgatttatgtactactatgtggattttgtttatactattatacattgtaaacaaattcattgttagggttatgatggatcttatgtaatataatcaaac |
4360051 |
T |
|
| Q |
633 |
t |
633 |
Q |
| |
|
| |
|
|
| T |
4360050 |
t |
4360050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 6532391 - 6532545
Alignment:
| Q |
102 |
tcaaatttatcaaaagaattttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaa |
201 |
Q |
| |
|
|||||||||||| ||||| ||| | |||| |||||| || ||||| ||| |||||| || |||||||||||||| || | ||||||||| ||||||| |
|
|
| T |
6532391 |
tcaaatttatcagaagaagtttttggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactaacttttcaagattaggcat |
6532490 |
T |
|
| Q |
202 |
gtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatt |
256 |
Q |
| |
|
|||||||||| ||||| | |||| || |||||||||||||||| |||||| |
|
|
| T |
6532491 |
atatgaaaagtttggggtttcagtcaaatgtagagaatgactaagattaagaatt |
6532545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 6752820 - 6752726
Alignment:
| Q |
164 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| ||||||||||| || || | |||| || ||||||||||||||||| |||||||| |
|
|
| T |
6752820 |
ggacagtctttgagtacaagcttttcaagattaggcatatatgaaaagtctggagtttcggtcaaatcctgagaatgactaagattaagaatttt |
6752726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 258
Target Start/End: Complemental strand, 6837194 - 6837040
Alignment:
| Q |
104 |
aaatttatcaaaagaattttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagt |
203 |
Q |
| |
|
|||||||||| ||||| ||| | |||| |||||| || ||||| ||| |||||| || |||||||||||||| || ||||||||||| || |||| | |
|
|
| T |
6837194 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
6837095 |
T |
|
| Q |
204 |
atgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
|||| ||||| || || | |||| || ||||||||||||||||| |||||||| |
|
|
| T |
6837094 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
6837040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 6772955 - 6772870
Alignment:
| Q |
173 |
ttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
||||| || ||||||||||| || ||||||||||||||||| ||||| | |||| || ||| |||||||||||||| |||||||| |
|
|
| T |
6772955 |
ttgagtactagcttttcaagattcggcaagtatgaaaagtctggggtttcggtcaaatcatgggaatgactaagattaagaatttt |
6772870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 258
Target Start/End: Complemental strand, 6796789 - 6796553
Alignment:
| Q |
22 |
acatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaatt |
121 |
Q |
| |
|
||||||||| ||||| | ||||| |||||||| || ||||||||| |||||||||| || | ||||| || || ||| |||||||||| | ||||||| |
|
|
| T |
6796789 |
acatccagaaagaatcaaagtttctagagattttaatgtatagatgcttcttggaagtttccgaagacctatgcagtctgtcaaatttatgagaagaatt |
6796690 |
T |
|
| Q |
122 |
ttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtct |
221 |
Q |
| |
|
|| | ||| |||||| || ||||| ||| ||||| || ||||| | ||| || || ||||||||||| || || ||||||| |||||| ||||| | |
|
|
| T |
6796689 |
ttatgtagagatccaatgctatgggagaccgtagacaaacttggacaattttttagtactagcttttcaagatttggtaagtatgtaaagtctggggttt |
6796590 |
T |
|
| Q |
222 |
gtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
|||| || | |||||||||||||| |||||||| |
|
|
| T |
6796589 |
cagtcaaatccagggaatgactaagattaagaatttt |
6796553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 6498747 - 6498841
Alignment:
| Q |
164 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
|||||||||||||| || |||||||||| ||||||||||| | |||||| ||||| | ||| || ||||||||||||||||| |||||||| |
|
|
| T |
6498747 |
ggacagtctttgagtactagcttttcaatattaggcaagtacgtaaagtctggggtttcaatcaaattctgagaatgactaagattaagaatttt |
6498841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 6588417 - 6588511
Alignment:
| Q |
164 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
||||||| ||| ||||| ||||||||||| ||||| ||||| |||||||| ||||| | |||| || |||||||||||||||| |||||||| |
|
|
| T |
6588417 |
ggacagttttttagcacaagcttttcaagattaggtaagtaggaaaagtctggggtttcagtcaaatctagagaatgactaagattaagaatttt |
6588511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 258
Target Start/End: Complemental strand, 6815473 - 6815236
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
|||||||||| ||||| | ||||| |||||||| || ||||| || |||||||||| || | ||||| | || ||| |||||||||| | |||||| |
|
|
| T |
6815473 |
aacatccagaaagaatcaaagtttctagagattttaatttatagttgcttcttggaagtttccgaagacctgtgcagtctgtcaaatttatgagaagaat |
6815374 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| | ||| ||||||||| ||||| || ||||| || ||||| | |||||| || ||||||||||| || |||||||||| |||||| ||||| |
|
|
| T |
6815373 |
tttatgtagagatccaatactatgggagactgtagacaaacttggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggtt |
6815274 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
| |||| || |||||||||| ||||| |||||||| |
|
|
| T |
6815273 |
tcagtcaaatctggagaatgacttagattaagaatttt |
6815236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 6650927 - 6650872
Alignment:
| Q |
164 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggt |
219 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| | |||||||||| ||||| |
|
|
| T |
6650927 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6650872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 7885541 - 7885583
Alignment:
| Q |
93 |
tacaatctttcaaatttatcaaaagaattttcttgagatgtcc |
135 |
Q |
| |
|
||||||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
7885541 |
tacaatctttcaaatttattaaaagaatctttttgagatgtcc |
7885583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 137; Significance: 3e-71; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 32 - 300
Target Start/End: Original strand, 5690248 - 5690516
Alignment:
| Q |
32 |
agaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagat |
131 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| || |||||||||| ||||||||||| ||||||||| | ||||| |
|
|
| T |
5690248 |
agaatgagagttttcagagatttcaacttatagatgcttcttggaaggttagaaaggctaatacaatcttccaaatttatcagaagaattttgtcgagat |
5690347 |
T |
|
| Q |
132 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
231 |
Q |
| |
|
||||||| || |||||||||||| || ||| ||||| |||||||| | ||||||||||| ||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
5690348 |
gtccaatgctatgggaaacctcacgcaaccttggacaatctttgagtattagcttttcaagattaggcatgattgaaaagtctggggtctgtgtcagata |
5690447 |
T |
|
| Q |
232 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
300 |
Q |
| |
|
|||||| |||||||||||||||||||| |||| |||||| ||| |||||| | |||||||| |||||| |
|
|
| T |
5690448 |
atgagagtgactaagattgagaattttaagcttctccatcatctacaagaatataaatattaaagagaa |
5690516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 26 - 300
Target Start/End: Original strand, 5354697 - 5354971
Alignment:
| Q |
26 |
ccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttct |
125 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| | |||||| ||||||| ||| || |||| | || || ||||| |||||||||| ||||||||| | |
|
|
| T |
5354697 |
ccagaaagaatgagagttttcaaagatttcaacttgtagatgcttcttgggaggctagaaaggttaatgcagtctttgaaatttatcagaagaattttat |
5354796 |
T |
|
| Q |
126 |
tgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgt |
225 |
Q |
| |
|
||||||||||||| ||| | ||||| ||||| | | | ||||| |||||||| || ||||||||||| ||||||| ||| |||||||||||||| ||||| |
|
|
| T |
5354797 |
tgagatgtccaatgcttggagaaacttcagataacattggacaatctttgagtacaagcttttcaagattaggcatgtaagaaaagtcaggggtatgtgt |
5354896 |
T |
|
| Q |
226 |
cagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
300 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||| |
|
|
| T |
5354897 |
cagacaatgtgaatgactaagattgagaattttcagatgctccattctctgcaagaacatacatattaaagagaa |
5354971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 19 - 300
Target Start/End: Original strand, 5182003 - 5182284
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| ||||||||||| || | |||||||| |||||||| ||||||||||| | ||| || || ||||||| ||||||||||||||| |
|
|
| T |
5182003 |
taaacacccagaaagaatgagagtgtttaatgatttcaaattatagatgcttcttggaaggctttgaaggctaatgcaatcttccaaatttatcaaaagt |
5182102 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| ||||||| | ||||||| ||| |||| || | || ||||||||||||||||| ||||||||| || | |
|
|
| T |
5182103 |
attttattgagatctccaatactttgggaaacttcagacaacttcggacaatctgtgagtactaactgttcaaggttaggcaagtttgaaaagtctggag |
5182202 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
300 |
Q |
| |
|
||| || |||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||| |
|
|
| T |
5182203 |
tctttgacagaaaatgagaatgactaagattgagaattttcagcttctccagcctctgcaagaacagaaatgttataaagaa |
5182284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 19 - 289
Target Start/End: Complemental strand, 5447592 - 5447322
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||||| |||||||||| |||||||| ||||||| ||||||| || | |||||||||| ||||||||||| |||| |
|
|
| T |
5447592 |
taaacaaccagaaagaatgagagttttcaaagatttcaacttatagatgcttcttgggaggttacctaggccaatacaatcttccaaatttatcagaaga |
5447493 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| |||||||||||||| || | ||||||||||||| | | ||||| |||||||| || ||||||||||| ||||||||| |||||||||| ||| |
|
|
| T |
5447492 |
attttattgagatgtccaatgctaggagaaacctcagacaacattggacaatctttgagtactagcttttcaagattaggcaagcatgaaaagtccggga |
5447393 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaat |
289 |
Q |
| |
|
| | ||||||| |||||||||||||||||||||| ||||||| | ||||| ||||||||||||| |||| |
|
|
| T |
5447392 |
tgtttgtcagacgatgagaatgactaagattgagatttttcagattttccatcctctgcaagaacaaaaat |
5447322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 26 - 284
Target Start/End: Original strand, 5128500 - 5128758
Alignment:
| Q |
26 |
ccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttct |
125 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| |||||||| ||||||| ||| |||| || || || ||||||| ||||||||||| ||||||||| | |
|
|
| T |
5128500 |
ccagaaagaatgagagttttcaaagatttcaacttatagatgcttcttgggaggctacataggctaatgcaatcttccaaatttatcagaagaattttat |
5128599 |
T |
|
| Q |
126 |
tgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgt |
225 |
Q |
| |
|
|||||||||| || || ||||||||||||| | | | ||| |||||||| || ||||||||||| ||||| || ||||||||||| ||||| ||||| |
|
|
| T |
5128600 |
tgagatgtccgatgctagtagaaacctcagacaacattgaacaatctttgagtactagcttttcaagattaggtaaatatgaaaagtctggggtgtgtgt |
5128699 |
T |
|
| Q |
226 |
cagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaaca |
284 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
5128700 |
cagacaatgagaatgactatgattgagaattttcagcttctccatcatctgcaagaaca |
5128758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 21 - 293
Target Start/End: Complemental strand, 5176742 - 5176470
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
|||| ||||| |||||||| ||||||| |||||||||| ||||||| |||||||||| | ||| || |||||||||| ||| ||||||| |||||| |
|
|
| T |
5176742 |
aacacccagaaagaatgagtgttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaat |
5176643 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| | |||||||||||| || |||||||||||| || ||| || || ||| |||| | ||||||||||| ||||||| || ||||||||| |||||| |
|
|
| T |
5176642 |
tttatcgagatgtccaatgctatgggaaacctcacgcaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtc |
5176543 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
293 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
5176542 |
tctgtcagataatgagaatgactaagattaagaattttcagcttctccatcctctgcaagaacaaaaatatta |
5176470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 32 - 300
Target Start/End: Original strand, 5284478 - 5284746
Alignment:
| Q |
32 |
agaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagat |
131 |
Q |
| |
|
||||||| |||||| |||||||||||| |||||||| ||| ||| ||| |||| | || |||||| ||| |||||||||||| |||||| ||||||| |
|
|
| T |
5284478 |
agaatgaaagtttttagagatttcaacttatagatgcttcgtgggaggctacataagctaatacaaccttcaaaatttatcaaagcaattttattgagat |
5284577 |
T |
|
| Q |
132 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
231 |
Q |
| |
|
|||||| || | ||||||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||| || |||||||||||| | |||| ||||| |
|
|
| T |
5284578 |
ttccaatgctaggtgaaacctcagatagccttggacaatctttgagcactagcttttcaagattaggcatgttcgaaaagtcagggcttcgtgtgagata |
5284677 |
T |
|
| Q |
232 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
5284678 |
atgggaatgactaagattgagaattttcagcttctccatcctctgcaagaacataaatattattgagaa |
5284746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 26 - 286
Target Start/End: Complemental strand, 5096706 - 5096446
Alignment:
| Q |
26 |
ccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttct |
125 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||| ||| ||| || | |||||||| ||||| ||| | |||||||| |
|
|
| T |
5096706 |
ccagaaagaatgagagttttcagagatttcaacttatagatgcttcctggaaggctacgaaggctaacacaatcttccaaatctattagaagaatttcac |
5096607 |
T |
|
| Q |
126 |
tgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgt |
225 |
Q |
| |
|
|||||| |||||| || | ||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||| |||||||||||| ||||| ||||| |
|
|
| T |
5096606 |
tgagatttccaatgctaggagaaacctcagacaacattggacaatctttaagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgtgt |
5096507 |
T |
|
| Q |
226 |
cagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacaga |
286 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
5096506 |
cagacaatgagaatgactaagatttagaattttcagtttttccatcctctgcaagaacaga |
5096446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 293
Target Start/End: Complemental strand, 5278569 - 5278297
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
|||| ||||| |||||||| ||||||| |||||||||| ||||||| |||||||||| | ||| || |||||||||| ||| ||||||| |||||| |
|
|
| T |
5278569 |
aacacccagaaagaatgagtgttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaat |
5278470 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| | ||||| |||||| || || ||||||||| ||| ||| || || ||| |||| | ||||||||||| ||||||| || ||||||||| |||||| |
|
|
| T |
5278469 |
tttatcgagatatccaatgctatgagaaacctcacacaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtc |
5278370 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
293 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
5278369 |
tctgtcagataatgagaatgactaagattaagaattttcagcttctccatcctctgcaagaacaaaaatatta |
5278297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 32 - 269
Target Start/End: Original strand, 5073997 - 5074234
Alignment:
| Q |
32 |
agaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagat |
131 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||| ||||||||||| | ||||| |||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
5073997 |
agaatgagagtttttagagatttcaacttatagatacttcttggaaggctctgaagaccaatacaatcttccaaatttatcagaagaattttattgagat |
5074096 |
T |
|
| Q |
132 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
231 |
Q |
| |
|
|| ||||||| || |||||||| |||| ||| ||||| ||| |||| || || | |||||| |||||||||| |||||| || || || || |||||||| |
|
|
| T |
5074097 |
gttcaatactatgagaaacctctgacaaccttggacaatctgtgagtactagttgttcaagattaggcaagtttgaaaaatctggagtttgcgtcagata |
5074196 |
T |
|
| Q |
232 |
atgagaatgactaagattgagaattttcagctgctcca |
269 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
5074197 |
atgagaatgactaagattgagtattttcagcttctcca |
5074234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 35 - 284
Target Start/End: Complemental strand, 5434024 - 5433775
Alignment:
| Q |
35 |
atgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagatgtc |
134 |
Q |
| |
|
||||||||||||| |||||||||| |||| ||| ||||||| |||||||| || | |||||||||| ||||||||||| |||||||| |||||||| | |
|
|
| T |
5434024 |
atgagagttttcaaagatttcaacttatatatgcttcttgggaggttacataggccaatacaatcttccaaatttatcagaagaatttcattgagatggc |
5433925 |
T |
|
| Q |
135 |
caatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatg |
234 |
Q |
| |
|
|||| || | |||| |||||| || || ||||| ||| |||| || | ||||||||| |||||||| | ||||||||| || || |||||||||||||| |
|
|
| T |
5433924 |
caatgctaggagaaatctcagaaagacttggacaatctgtgagtactaacttttcaagattaggcaaatttgaaaagtctggtgtttgtgtcagataatg |
5433825 |
T |
|
| Q |
235 |
agaatgactaagattgagaattttcagctgctccattctctgcaagaaca |
284 |
Q |
| |
|
| |||||||||| || ||||||||||||| |||||||||||||||||||| |
|
|
| T |
5433824 |
acaatgactaaggttaagaattttcagcttctccattctctgcaagaaca |
5433775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 19 - 295
Target Start/End: Complemental strand, 5383331 - 5383055
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||| |||| ||| ||||||| ||| |||| || || | ||| |||| |||||| |||| |||| |
|
|
| T |
5383331 |
taaacaaccagaaagaatgagagttttcagagatttcaacttataaatgcttcttgggaggctacataggctaacacagtcttccaaattaatcagaaga |
5383232 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||||||||||| |||||| || | |||||||| |||| ||||||||| ||| ||| || ||||||||||| |||||||| | ||| ||||| |||| |
|
|
| T |
5383231 |
attttcttgagatctccaatgctaggagaaacctcggacaacctcggacaatctgcgagtactagcttttcaagattaggcaaatttgagaagtctgggg |
5383132 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattata |
295 |
Q |
| |
|
|||| ||| ||||||||||||||||| || || |||||||| |||||| ||||||||||||| |||||||||| |
|
|
| T |
5383131 |
tctgcaccaggtaatgagaatgactaaggtttaggattttcagtatctccatcctctgcaagaacataaatattata |
5383055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 5102690 - 5102957
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| |||||||| |||||| |||||||||| |||||||| ||||||||||| ||| ||| || | |||||||| ||||| ||| | ||| |
|
|
| T |
5102690 |
taaacacccagaaagaatgagtattttcaaagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaatctattagaagt |
5102789 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
|||| |||||| |||||| | | |||||||||||| | | ||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
5102790 |
atttcagtgagatctccaatggtaggacaaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcaagtatgaaaagtcagggg |
5102889 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacaga |
286 |
Q |
| |
|
| || |||||| ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
5102890 |
tgtgcgtcagacaatgagaatgactaagatttagaattttcagcttttccaacctctgcaagaacaga |
5102957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 26 - 285
Target Start/End: Complemental strand, 5425908 - 5425649
Alignment:
| Q |
26 |
ccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttct |
125 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | ||| | | |||||||| |||||||| | |||||||| |
|
|
| T |
5425908 |
ccagaaagaatgagagttttcagagatttcaacttatagatgtttcttggaaggctttgaaggcgaacacaatcttctaaatttattagaagaatttctc |
5425809 |
T |
|
| Q |
126 |
tgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgt |
225 |
Q |
| |
|
|||||| |||||| || | |||| |||||||| | | ||||| ||||||||||||||||||||||| ||||||| | ||| |||||||||||| | || |
|
|
| T |
5425808 |
tgagatttccaatgctaggagaaatctcagacaacattggacaatctttgagcaccagcttttcaagattaggcatgaatgtaaagtcaggggtgcgcgt |
5425709 |
T |
|
| Q |
226 |
cagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacag |
285 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||| ||||| | |||||| ||||| |
|
|
| T |
5425708 |
cagacaatgagaatgactaagatttagaattttcagcttttccatccactgcaaaaacag |
5425649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 21 - 294
Target Start/End: Original strand, 5257412 - 5257685
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
|||| ||||| ||||||| |||||| |||||||||||| |||||||| ||||||| || | || | || |||||||||| |||||||||||||| ||| |
|
|
| T |
5257412 |
aacacccagaaagaatgaaagtttttagagatttcaacttatagatgcttcttgggagttcgcataagctaatacaatcttccaaatttatcaaaacaat |
5257511 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||||||||||| |||||| ||| |||||| ||| ||| | ||||| |||||||| || | ||||||||| ||||||| || |||||||||||| | |
|
|
| T |
5257512 |
tttcttgagatttccaatgcttgaagaaaccctagatagcattggacaatctttgagtactaacttttcaagattaggcatgttggaaaagtcagggctt |
5257611 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattat |
294 |
Q |
| |
|
||| ||| || | |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |
|
|
| T |
5257612 |
cttgtgagacaacgggaatgactaagattgagaattttcagcttctccatcctctgcaagaacataaatattat |
5257685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 19 - 300
Target Start/End: Complemental strand, 5344866 - 5344585
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| || || |||||||||||||| ||||| |||||| |||||||| ||||||| ||| |||| || || ||||| |||| |||||| || | |||| |
|
|
| T |
5344866 |
taaacaacccgaaagaatgagagtttttagagaattcaacttatagatgcttcttggcaggctacataggctaatacagtcttccaaattaatgagaaga |
5344767 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||||||||||| |||||| || || |||| |||| ||| || ||||| || ||| || | ||||||||| ||||| ||||| |||||||| |||| |
|
|
| T |
5344766 |
attttcttgagatctccaatgctatgagaaatctcacacaaacttggacaatccacgagtactaacttttcaagattaggtaagtaagaaaagtccgggg |
5344667 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
300 |
Q |
| |
|
| ||| |||| |||||||||||||||||||||||||||||||||| |||||| |||| ||||||| |||| || ||||||| |
|
|
| T |
5344666 |
tttgtatcaggtaatgagaatgactaagattgagaattttcagcttctccatcatctgtaagaacataaatgttgtagagaa |
5344585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 42 - 286
Target Start/End: Original strand, 5157727 - 5157971
Alignment:
| Q |
42 |
ttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagatgtccaatact |
141 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||| | | ||| || | |||||||| ||||| ||| | |||||||| |||||| |||||| || |
|
|
| T |
5157727 |
ttttcagagatttcaacttatagatgcttcttggaaggcttcgaaggctaacacaatcttccaaatctattagaagaatttcactgagatttccaatgct |
5157826 |
T |
|
| Q |
142 |
ttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatga |
241 |
Q |
| |
|
| ||||||||||||| | | ||||| |||||||| |||||||| ||||| ||||||| |||||||||||| ||||| || |||||| ||||||||||| |
|
|
| T |
5157827 |
aggagaaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgcgtcagacaatgagaatga |
5157926 |
T |
|
| Q |
242 |
ctaagattgagaattttcagctgctccattctctgcaagaacaga |
286 |
Q |
| |
|
|||||||| |||||||| |||| ||||| |||||||||||||| |
|
|
| T |
5157927 |
ctaagatttagaatttttagcttttccatcatctgcaagaacaga |
5157971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 286
Target Start/End: Original strand, 5066777 - 5067037
Alignment:
| Q |
26 |
ccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttct |
125 |
Q |
| |
|
||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||||| ||| || | |||||||| ||||| ||| | |||||||| |
|
|
| T |
5066777 |
ccagaaagaatgagagttttaagagatttcaacttatagatgcttcttggaaggttacgaaggctaacacaatcttccaaatctattagaagaatttcac |
5066876 |
T |
|
| Q |
126 |
tgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgt |
225 |
Q |
| |
|
|||| | ||| || | | |||||||| |||| | ||||| |||||||| || ||||||||||| ||||||| ||||||||||||||||| || | |
|
|
| T |
5066877 |
tgagttttcctattgtaggagaaacctcggacaatattggacaatctttgagtactagcttttcaagattaggcatatatgaaaagtcaggggtgtgcat |
5066976 |
T |
|
| Q |
226 |
cagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacaga |
286 |
Q |
| |
|
|||| |||||||||| |||||||| ||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
5066977 |
cagacaatgagaatggctaagatttagaattttcagcttttccatcctctgcaagaacaga |
5067037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 32 - 284
Target Start/End: Complemental strand, 5370563 - 5370311
Alignment:
| Q |
32 |
agaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagat |
131 |
Q |
| |
|
||||| ||||| || |||||||||||| |||| ||| ||||||||||||||| ||| || | |||||||| |||| ||| | |||||||| ||||| |
|
|
| T |
5370563 |
agaataagagtctttagagatttcaacttataaatgcttcttggaaggttacgaaggctaacacaatcttcaaaatctattagaagaatttcgccgagat |
5370464 |
T |
|
| Q |
132 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
231 |
Q |
| |
|
||||| || | ||||||||||||||| | | ||| |||||||| || | ||||||||| |||||||||||||||||||| ||||| || |||||| | |
|
|
| T |
5370463 |
tcccaatgctaggagaaacctcagacagcattgaacaatctttgagtactaacttttcaagcttaggcaagtatgaaaagtctggggtgtgcgtcagaca |
5370364 |
T |
|
| Q |
232 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaaca |
284 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| ||||| |||||||||||| |
|
|
| T |
5370363 |
atgagaatgactaagatttagaatttttagcttttccatcatctgcaagaaca |
5370311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 5447162 - 5446897
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| |||| ||||||||||| |||||||||| |||||||| || |||| ||| |||| || || || || |||| ||| ||||||| |||| |
|
|
| T |
5447162 |
taaacaaccagaaagaacgagagttttcaaagatttcaacttatagatgctttttgggaggctacataggctaatgcagtcttccaagtttatcagaaga |
5447063 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| |||||||||| || || | ||||||||||||| | || || |||||||| || || |||| ||| |||||| || ||||||||||||| |
|
|
| T |
5447062 |
attttattgagatgtctgatgctaggtgaaacctcagacaacagtgggcaatctttgagtactagtttttgaagattaggcgtgtttgaaaagtcagggc |
5446963 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaaca |
284 |
Q |
| |
|
| ||||| ||||| || ||||| ||||||||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
5446962 |
tttgtgtgagatagtgcgaatggctaagattgagaatttttagcttctccatcctctgcaagaaca |
5446897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 93 - 284
Target Start/End: Original strand, 5147046 - 5147237
Alignment:
| Q |
93 |
tacaatctttcaaatttatcaaaagaattttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaag |
192 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| ||||||| ||||||||| || ||||| ||||||| | | ||||| || ||| || || | |||||| |
|
|
| T |
5147046 |
tacaatcttccaaatttatcagaagaattttattgagatatccaatactatgagaaacttcagacaacattggacaatcagagagtactagttgttcaag |
5147145 |
T |
|
| Q |
193 |
gttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaaca |
284 |
Q |
| |
|
|||||||||| | |||||| ||||||||||||| ||||||||| |||||||| ||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
5147146 |
attaggcaagtttaaaaagtttggggtctgtgtcaaataatgagagtgactaagcttgagaatttttagcttctccatcctctgcaagaaca |
5147237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 5396787 - 5396674
Alignment:
| Q |
187 |
ttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacaga |
286 |
Q |
| |
|
|||||| ||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
5396787 |
ttcaagattaggcatgtttgaaaagtctggggtctgtgtcaaataatgagaatgactaagattgagaattttcagcttctccagcctctgcaagaacata |
5396688 |
T |
|
| Q |
287 |
aatattatagagaa |
300 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5396687 |
aatattataaagaa |
5396674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 32 - 263
Target Start/End: Complemental strand, 5350386 - 5350157
Alignment:
| Q |
32 |
agaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagat |
131 |
Q |
| |
|
|||||||||||||| |||||||||||| || ||||| ||||||||||| | ||| || | |||||| | ||||| ||| | |||||||| |||||| |
|
|
| T |
5350386 |
agaatgagagttttgagagatttcaacttaaagatgcttcttggaaggctttgaaggctaacacaatcctccaaatctattagaagaatttcactgagat |
5350287 |
T |
|
| Q |
132 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
231 |
Q |
| |
|
|||||| || | |||||||| |||| | | ||||| |||||||| || ||||||||||| ||||||| |||||||||||| |||| ||||||||| | |
|
|
| T |
5350286 |
ctccaatgctaggagaaacctcggacaacattggacaatctttgagtactagcttttcaagattaggcatgtatgaaaagtc--gggtgtgtgtcagaca |
5350189 |
T |
|
| Q |
232 |
atgagaatgactaagattgagaattttcagct |
263 |
Q |
| |
|
| ||||||||||||||| ||||||||||||| |
|
|
| T |
5350188 |
acaagaatgactaagatttagaattttcagct |
5350157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 32 - 263
Target Start/End: Original strand, 5243956 - 5244187
Alignment:
| Q |
32 |
agaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagat |
131 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||| ||||||||||| | | ||| || | |||||||| ||||| ||| | |||||||| |||||| |
|
|
| T |
5243956 |
agaatgaaagttttcagagatttcaacttatagatgcttcttggaaggcttcgaaggctaacacaatcttccaaatctattagaagaatttcactgagat |
5244055 |
T |
|
| Q |
132 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
231 |
Q |
| |
|
||||| || | |||| ||| |||| | | ||| |||||||| || ||||||||||| || | || |||||||||||| ||||| || |||||| | |
|
|
| T |
5244056 |
tcccaatgctaggagaaatctcggacaacactgaacaatctttgagtactagcttttcaagatttgacatgtatgaaaagtctggggtgtgcgtcagaca |
5244155 |
T |
|
| Q |
232 |
atgagaatgactaagattgagaattttcagct |
263 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| |
|
|
| T |
5244156 |
atgagaatgactaagatttagaatttttagct |
5244187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 108; Significance: 7e-54; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 21 - 300
Target Start/End: Original strand, 36213907 - 36214186
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
|||||||||| |||||||||||||| || |||| ||| ||||||| | | |||||| | ||| || |||||||||| ||||||||| | ||||| |
|
|
| T |
36213907 |
aacatccagaaagaatgagagttttaagtaattttaacttatagatacctttaggaaggctttgaaggctaatacaatcttccaaatttattagaagaac |
36214006 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||| || ||||| ||| |||| || || |||||||||||||||| || |||||| || || ||| |
|
|
| T |
36214007 |
tttattgagatgtccaatactgtgggaaacctcagacaatcttggacaatctgtgagtactagtttttcaaggttaggcatgtttgaaaaatctggagtc |
36214106 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||| |
|
|
| T |
36214107 |
tttgtcagataatgagaatgactaagattgagaattttcagcttttccagcctctgcaagaacagaaatgttataaagaa |
36214186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 60 - 263
Target Start/End: Complemental strand, 18935350 - 18935147
Alignment:
| Q |
60 |
tatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttcttgagatgtccaatactttgggaaacctcagacag |
159 |
Q |
| |
|
|||||||| |||||||||| | |||||| | |||| |||||||||||||| |||||||||||||||||| |||| ||||| || |||||| |||| |
|
|
| T |
18935350 |
tatagatgcttcttggaagttcacaaaggcctgtacagtctttcaaatttattaaaagaattttcttgagaagtcctatactatgagaaaccgaggacaa |
18935251 |
T |
|
| Q |
160 |
cctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttc |
259 |
Q |
| |
|
|| || || |||||||| | | ||||||||| || ||||||| |||||||| ||||| ||| |||| | |||||||||||||||||| |||| ||| |
|
|
| T |
18935250 |
acttgggcaatctttgagtattaacttttcaagattcggcaagtttgaaaagttcggggtttgtctcaggttatgagaatgactaagattaagaaacttc |
18935151 |
T |
|
| Q |
260 |
agct |
263 |
Q |
| |
|
|||| |
|
|
| T |
18935150 |
agct |
18935147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 263
Target Start/End: Original strand, 34724665 - 34724906
Alignment:
| Q |
22 |
acatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaatt |
121 |
Q |
| |
|
||||||||| | |||||||||||| | || ||||| |||||||| |||||||||| | |||||| | |||| ||||||||||||||||| |||||| |
|
|
| T |
34724665 |
acatccagacacaatgagagtttttactgacttcaatttatagatgcttcttggaagctcacaaaggcctgtacagtctttcaaatttatcaatagaatt |
34724764 |
T |
|
| Q |
122 |
ttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtct |
221 |
Q |
| |
|
|||||||||| ||| ||| | | ||||| |||| | ||||| |||||||| | | ||||||||| || ||||||||||||||||| || || | |
|
|
| T |
34724765 |
ttcttgagatttcctatattaggagaaactgaggacaaatttggacaatctttgagtattaacttttcaagatttggcaagtatgaaaagtctggtgttt |
34724864 |
T |
|
| Q |
222 |
gtgtcagataatgagaatgactaagattgagaattttcagct |
263 |
Q |
| |
|
|| ||| | |||||||||||||||||| |||| |||||||| |
|
|
| T |
34724865 |
gtttcaagttatgagaatgactaagattaagaaatttcagct |
34724906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 26 - 295
Target Start/End: Original strand, 8983 - 9252
Alignment:
| Q |
26 |
ccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaattttct |
125 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||| || | |||||||| ||||| ||| | ||| |||| |
|
|
| T |
8983 |
ccagaaagaatgagagttttcagagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaatctattagaagtatttcac |
9082 |
T |
|
| Q |
126 |
tgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgt |
225 |
Q |
| |
|
||||| |||||| | || |||||||| | || | | ||||| |||||||| || ||||||||||| |||||||| ||||||||||| ||||| || | |
|
|
| T |
9083 |
cgagatctccaatggtatgagaaacctcggtcaacattggacaatctttgagtactagcttttcaagattaggcaaatatgaaaagtctggggtatgcat |
9182 |
T |
|
| Q |
226 |
cagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattata |
295 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| | ||| |||||||||| || |||||||||| |
|
|
| T |
9183 |
caaataatgagaatgactaagattgagaattttcagcttcgccagcctctgcaagaccataaatattata |
9252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 21 - 300
Target Start/End: Complemental strand, 8877612 - 8877333
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
|||| ||||| |||||||||| ||| |||||||||||| | || || ||||||||||| | | ||| || |||||||||| ||||||||||||||||| |
|
|
| T |
8877612 |
aacacccagaaagaatgagagattttagagatttcaacttgtatatacttcttggaaggctccgaaggctaatacaatcttccaaatttatcaaaagaac |
8877513 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| || ||| |||| ||| | || |||| ||| || ||||||||| |||||||| || ||||||||||| |||||||||| | ||||||| || || |
|
|
| T |
8877512 |
tttattcagaagtcctatagtatgcgaaatctctatcaacctcggacaatctttgagtactagcttttcaagattaggcaagtttaaaaagtctggagtt |
8877413 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
300 |
Q |
| |
|
|||||||||| |||||| || ||||||||||||||||| |||| |||||| ||||||||||||| |||| | |||||||| |
|
|
| T |
8877412 |
tgtgtcagatgatgagagtggctaagattgagaatttttagcttctccatcctctgcaagaacataaatttgatagagaa |
8877333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 47986928 - 47987206
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||||| || | || || ||||||| ||| |||| || || ||||| |||| ||||||||||| |||| |
|
|
| T |
47986928 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
47987027 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| | |||||||||||| || | |||| |||||| | | | || || |||||||| || |||||||| || ||||||| || |||||||||| || |
|
|
| T |
47987028 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
47987127 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattataga |
297 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||| ||||||| |
|
|
| T |
47987128 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacatgaattttataga |
47987206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 47996215 - 47996493
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||||| || | || || ||||||| ||| |||| || || ||||| |||| ||||||||||| |||| |
|
|
| T |
47996215 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
47996314 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| | |||||||||||| || | |||| |||||| | | | || || |||||||| || |||||||| || ||||||| || |||||||||| || |
|
|
| T |
47996315 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
47996414 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattataga |
297 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||| ||||||| |
|
|
| T |
47996415 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacatgaattttataga |
47996493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 48005502 - 48005780
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||||| || | || || ||||||| ||| |||| || || ||||| |||| ||||||||||| |||| |
|
|
| T |
48005502 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
48005601 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| | |||||||||||| || | |||| |||||| | | | || || |||||||| || |||||||| || ||||||| || |||||||||| || |
|
|
| T |
48005602 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
48005701 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattataga |
297 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||| ||||||| |
|
|
| T |
48005702 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacatgaattttataga |
48005780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 48014787 - 48015065
Alignment:
| Q |
19 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaaga |
118 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||||| || | || || ||||||| ||| |||| || || ||||| |||| ||||||||||| |||| |
|
|
| T |
48014787 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
48014886 |
T |
|
| Q |
119 |
attttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
218 |
Q |
| |
|
||||| | |||||||||||| || | |||| |||||| | | | || || |||||||| || |||||||| || ||||||| || |||||||||| || |
|
|
| T |
48014887 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
48014986 |
T |
|
| Q |
219 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattataga |
297 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||| ||||||| |
|
|
| T |
48014987 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacatgaattttataga |
48015065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 22584292 - 22584382
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttat |
111 |
Q |
| |
|
|||| ||||| |||||||||||||||| |||||||||| | |||||||||||||| ||| ||||||| || | ||| |||| ||||||||| |
|
|
| T |
22584292 |
aacagccagaaagaatgagagttttcaaagatttcaacttgtagatgtttcttgggaggctacaaaggcttaaacagtcttgcaaatttat |
22584382 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 258
Target Start/End: Complemental strand, 9610 - 9456
Alignment:
| Q |
104 |
aaatttatcaaaagaattttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagt |
203 |
Q |
| |
|
|||||||||| ||||| ||| | |||| |||||| || ||||| ||| |||||| || |||||||||||||| || ||||||||||| || |||| | |
|
|
| T |
9610 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
9511 |
T |
|
| Q |
204 |
atgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
|||| ||||| || || | |||| || ||||||||||||||||| |||||||| |
|
|
| T |
9510 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
9456 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 258
Target Start/End: Original strand, 8363 - 8600
Alignment:
| Q |
21 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaagactgatacaatctttcaaatttatcaaaagaat |
120 |
Q |
| |
|
|||||||||| ||||| | ||||| |||||||| || ||||| || |||||||||| || | ||||| | || ||| |||||||||| | |||||| |
|
|
| T |
8363 |
aacatccagaaagaatcaaagtttctagagattttaatttatagttgcttcttggaagtttccgaagacctgtgcagtctgtcaaatttatgagaagaat |
8462 |
T |
|
| Q |
121 |
tttcttgagatgtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtc |
220 |
Q |
| |
|
||| | ||| ||||||||| ||||| || ||||| || ||||| | |||||| || ||||||||||| || |||||||||| |||||| ||||| |
|
|
| T |
8463 |
tttatgtagagatccaatactatgggagactgtagacaaacttggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggtt |
8562 |
T |
|
| Q |
221 |
tgtgtcagataatgagaatgactaagattgagaatttt |
258 |
Q |
| |
|
| |||| || |||||||||| ||||| |||||||| |
|
|
| T |
8563 |
tcagtcaaatctggagaatgacttagattaagaatttt |
8600 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 5047 - 5102
Alignment:
| Q |
164 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggt |
219 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| | |||||||||| ||||| |
|
|
| T |
5047 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
5102 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 6519 - 6464
Alignment:
| Q |
164 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggt |
219 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| | |||||||||| ||||| |
|
|
| T |
6519 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6464 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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