View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_129 (Length: 325)
Name: NF11324A_low_129
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_129 |
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Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 14 - 318
Target Start/End: Complemental strand, 37338921 - 37338617
Alignment:
| Q |
14 |
gaatcgacatcaattctggtccctgtttccatcacttgcttagtagtcgactgcgactgagatgcatttttcctcaatggagatttaaatgtaaatgaaa |
113 |
Q |
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| T |
37338921 |
gaatcgacatcaattctggtccttgtttccatcacttgcttagtagtcgactgcgactgagatgcatttttcctcaatggagatttaaatgtaaatgaaa |
37338822 |
T |
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| Q |
114 |
tgacatccctgctttctgtcatgctatatgcatcattgtaaatactttcatccattgtaacattacattttatagactttctatcatgagtattaactac |
213 |
Q |
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| T |
37338821 |
tgacatccctgctttctgtcatgctatatgcatcattgtaaatactttcatccattgtaacattacattttatagactttctatcatgagtattaactac |
37338722 |
T |
|
| Q |
214 |
attatcagaacctcgtgcatcattctgatcacacctcttcttttcggaagaactctttcttttggatactgaaagctcctttggcttatcagttactctt |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
37338721 |
attatcagaacctcgtgcatcattctgatcacacctcttcttttcggaagaactctttcttttggatactgaaagctccttttgcttatcagttactctt |
37338622 |
T |
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| Q |
314 |
gttct |
318 |
Q |
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||||| |
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| T |
37338621 |
gttct |
37338617 |
T |
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