View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_137 (Length: 319)
Name: NF11324A_low_137
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_137 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 33067350 - 33067088
Alignment:
| Q |
1 |
aatattgaaaggtgtagtaggaatgagaatgttgttgttggtataaaa-ttgatgaaatggatcctcctttacctgtgatcaagagggcgaataagttgg |
99 |
Q |
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| T |
33067350 |
aatattgaaaggtgtattaggaatgagaatgttgttgttggtataaaaattgatgaaatggatcctcctttacctgtgatcaagagggtgaataagttgg |
33067251 |
T |
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| Q |
100 |
aagaaggaaacaaaagtgagaatagtctttggaaaagaagatcaggttcaagtttggctccattgagaagtttacaggttcaacagattcaagttcaaac |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33067250 |
aagaaggaaacaaaagtgagaatagtctttggaaaagaagatcaggttcaagtttggctccattgagaagtttacaggttcaacagattcaagttcaaac |
33067151 |
T |
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| Q |
200 |
tccaaagctttgtattgaacctacaactgtttgataatggaattagattagacagatccatag |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33067150 |
tccaaagctttgtattgaacctacaactgtttgataatggaattagattagacagatccatag |
33067088 |
T |
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