View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11324A_low_175 (Length: 289)

Name: NF11324A_low_175
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11324A_low_175
NF11324A_low_175
[»] chr3 (23 HSPs)
chr3 (11-289)||(44359233-44359523)
chr3 (83-111)||(2666007-2666035)
chr3 (83-111)||(5560179-5560207)
chr3 (83-111)||(7755453-7755481)
chr3 (83-111)||(22399104-22399132)
chr3 (83-111)||(24100290-24100318)
chr3 (83-111)||(27067125-27067153)
chr3 (83-111)||(29625974-29626002)
chr3 (83-111)||(32234544-32234572)
chr3 (83-111)||(37313406-37313434)
chr3 (83-111)||(39053401-39053429)
chr3 (83-111)||(40131106-40131134)
chr3 (83-111)||(40804657-40804685)
chr3 (83-111)||(41293465-41293493)
chr3 (83-111)||(41464359-41464387)
chr3 (83-111)||(42291849-42291877)
chr3 (83-111)||(43125838-43125866)
chr3 (83-111)||(44806691-44806719)
chr3 (83-111)||(47257800-47257828)
chr3 (83-111)||(49330044-49330072)
chr3 (83-111)||(51102525-51102553)
chr3 (83-111)||(51452897-51452925)
chr3 (83-111)||(52628961-52628989)
[»] chr8 (18 HSPs)
chr8 (83-112)||(40435299-40435328)
chr8 (83-111)||(2275920-2275948)
chr8 (83-111)||(2714556-2714584)
chr8 (83-111)||(5946054-5946082)
chr8 (83-111)||(6365993-6366021)
chr8 (83-111)||(12032959-12032987)
chr8 (83-111)||(17718869-17718897)
chr8 (83-111)||(22878398-22878426)
chr8 (83-111)||(31831102-31831130)
chr8 (83-111)||(32114256-32114284)
chr8 (83-111)||(32984224-32984252)
chr8 (83-111)||(37301472-37301500)
chr8 (83-111)||(37419947-37419975)
chr8 (83-111)||(37956428-37956456)
chr8 (83-111)||(41653902-41653930)
chr8 (83-111)||(41862227-41862255)
chr8 (83-111)||(43328714-43328742)
chr8 (83-111)||(45236712-45236740)
[»] chr4 (29 HSPs)
chr4 (83-112)||(41702605-41702634)
chr4 (83-111)||(146576-146604)
chr4 (83-111)||(2243465-2243493)
chr4 (83-111)||(6019935-6019963)
chr4 (83-111)||(14017521-14017549)
chr4 (83-111)||(17555633-17555661)
chr4 (83-111)||(18462160-18462188)
chr4 (83-111)||(21366756-21366784)
chr4 (83-111)||(22468917-22468945)
chr4 (83-111)||(22618659-22618687)
chr4 (83-111)||(23437599-23437627)
chr4 (83-111)||(29478367-29478395)
chr4 (83-111)||(29777404-29777432)
chr4 (83-111)||(31070220-31070248)
chr4 (83-111)||(39077552-39077580)
chr4 (83-111)||(41632153-41632181)
chr4 (83-111)||(41949389-41949417)
chr4 (83-111)||(42222298-42222326)
chr4 (83-111)||(42557589-42557617)
chr4 (83-111)||(43471842-43471870)
chr4 (83-111)||(47344663-47344691)
chr4 (83-111)||(48313564-48313592)
chr4 (83-111)||(49881210-49881238)
chr4 (83-111)||(50457957-50457985)
chr4 (84-112)||(50534639-50534667)
chr4 (83-111)||(51363014-51363042)
chr4 (83-111)||(53854576-53854604)
chr4 (83-111)||(54805765-54805793)
chr4 (83-111)||(55056406-55056434)
[»] scaffold0394 (1 HSPs)
scaffold0394 (83-111)||(3095-3123)
[»] scaffold0155 (1 HSPs)
scaffold0155 (83-111)||(2579-2607)
[»] scaffold0100 (1 HSPs)
scaffold0100 (83-111)||(32568-32596)
[»] scaffold0092 (1 HSPs)
scaffold0092 (83-111)||(39703-39731)
[»] scaffold0035 (1 HSPs)
scaffold0035 (83-111)||(75391-75419)
[»] chr7 (12 HSPs)
chr7 (83-111)||(10028496-10028524)
chr7 (83-111)||(15877558-15877586)
chr7 (83-111)||(20165961-20165989)
chr7 (83-111)||(22979794-22979822)
chr7 (83-111)||(33332797-33332825)
chr7 (83-111)||(33839862-33839890)
chr7 (83-111)||(45063502-45063530)
chr7 (83-111)||(45482666-45482694)
chr7 (83-111)||(46913117-46913145)
chr7 (83-111)||(47740478-47740506)
chr7 (83-111)||(48609824-48609852)
chr7 (83-111)||(49171509-49171537)
[»] chr6 (14 HSPs)
chr6 (83-111)||(599899-599927)
chr6 (83-111)||(960051-960079)
chr6 (83-111)||(1970718-1970746)
chr6 (83-111)||(2892195-2892223)
chr6 (83-111)||(5882513-5882541)
chr6 (83-111)||(8615247-8615275)
chr6 (83-111)||(16703373-16703401)
chr6 (83-111)||(18101642-18101670)
chr6 (83-111)||(19281202-19281230)
chr6 (83-111)||(19415680-19415708)
chr6 (83-111)||(22551208-22551236)
chr6 (83-111)||(28947094-28947122)
chr6 (83-111)||(30467750-30467778)
chr6 (83-111)||(30743595-30743623)
[»] chr5 (9 HSPs)
chr5 (83-111)||(3466828-3466856)
chr5 (83-111)||(5137722-5137750)
chr5 (83-111)||(5184979-5185007)
chr5 (83-111)||(15398629-15398657)
chr5 (83-111)||(18479815-18479843)
chr5 (83-111)||(24253389-24253417)
chr5 (83-111)||(25831528-25831556)
chr5 (83-111)||(40886174-40886202)
chr5 (83-111)||(43326526-43326554)
[»] chr2 (18 HSPs)
chr2 (83-111)||(746472-746500)
chr2 (83-111)||(2325036-2325064)
chr2 (83-111)||(4034598-4034626)
chr2 (83-111)||(6594605-6594633)
chr2 (83-111)||(7892835-7892863)
chr2 (83-111)||(10424601-10424629)
chr2 (83-111)||(12814620-12814648)
chr2 (83-111)||(13815365-13815393)
chr2 (83-111)||(23901785-23901813)
chr2 (83-111)||(26710351-26710379)
chr2 (83-111)||(27024421-27024449)
chr2 (83-111)||(27400409-27400437)
chr2 (83-111)||(27651181-27651209)
chr2 (83-111)||(28019968-28019996)
chr2 (83-111)||(32327367-32327395)
chr2 (83-111)||(32608386-32608414)
chr2 (83-111)||(38997107-38997135)
chr2 (83-111)||(40735470-40735498)
[»] chr1 (26 HSPs)
chr1 (83-111)||(4156212-4156240)
chr1 (83-111)||(5980075-5980103)
chr1 (83-111)||(5981177-5981205)
chr1 (83-111)||(6327694-6327722)
chr1 (83-111)||(17995098-17995126)
chr1 (83-111)||(23221076-23221104)
chr1 (83-111)||(23984762-23984790)
chr1 (83-111)||(24245172-24245200)
chr1 (83-111)||(24885508-24885536)
chr1 (83-111)||(25058695-25058723)
chr1 (83-111)||(26277184-26277212)
chr1 (83-111)||(26525036-26525064)
chr1 (83-111)||(27983734-27983762)
chr1 (83-111)||(31040716-31040744)
chr1 (83-111)||(31308008-31308036)
chr1 (83-111)||(31980082-31980110)
chr1 (83-111)||(33112964-33112992)
chr1 (83-111)||(35692811-35692839)
chr1 (83-111)||(38332006-38332034)
chr1 (83-111)||(44661977-44662005)
chr1 (83-111)||(45538160-45538188)
chr1 (83-111)||(46616556-46616584)
chr1 (83-111)||(46967188-46967216)
chr1 (83-111)||(48373511-48373539)
chr1 (83-111)||(49254122-49254150)
chr1 (83-111)||(51403154-51403182)


Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 44359233 - 44359523
Alignment:
Q  11 atactgtgcttgttttgtggtatgtatgttgtatcagtgtattactatt------------aatacttcacatattgnnnnnnnctagattacctttgaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||| |||||       ||| |||| |||||||    
T  44359233 atactgtgcttgttttgtggtatgtatgttgtatcagtgtattactatttataccataattaatacttcacgtattgtttttttctatattatctttgaa 44359332  T
Q  99 gaatggtgggtaacgttcattgcttgagtaaaatactcaccattttttcaagggtaacttaggtgttcttgacatgaaaaaattgtgatctaagatgtgt 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44359333 gaatggtgggtaacgttcattggttgagtaaaatactcaccattttttcaagggtaacttaggtgttcttgacatgaaaaaattgtgatctaagatgtgt 44359432  T
Q  199 aaaattgttttttgcacattacaatattgactgatttttgtcgagaaacatgtgacacacaagttagattatattcttttaatagaacttt 289  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44359433 aaaattgttttttgcacattacaatattgacggatttttgttgagaaacatgtgacacacaagttagattatattcttttaatagaacttt 44359523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 2666007 - 2666035
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  2666007 ctagattacctttgaagaatggtgggtaa 2666035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 5560207 - 5560179
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  5560207 ctagattacctttgaagaatggtgggtaa 5560179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 7755481 - 7755453
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  7755481 ctagattacctttgaagaatggtgggtaa 7755453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 22399104 - 22399132
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  22399104 ctagattacctttgaagaatggtgggtaa 22399132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 24100290 - 24100318
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  24100290 ctagattacctttgaagaatggtgggtaa 24100318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 27067153 - 27067125
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  27067153 ctagattacctttgaagaatggtgggtaa 27067125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 29626002 - 29625974
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  29626002 ctagattacctttgaagaatggtgggtaa 29625974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 32234572 - 32234544
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  32234572 ctagattacctttgaagaatggtgggtaa 32234544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 37313406 - 37313434
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  37313406 ctagattacctttgaagaatggtgggtaa 37313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 39053401 - 39053429
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  39053401 ctagattacctttgaagaatggtgggtaa 39053429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 40131134 - 40131106
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  40131134 ctagattacctttgaagaatggtgggtaa 40131106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 40804685 - 40804657
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  40804685 ctagattacctttgaagaatggtgggtaa 40804657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 41293493 - 41293465
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  41293493 ctagattacctttgaagaatggtgggtaa 41293465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 41464359 - 41464387
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  41464359 ctagattacctttgaagaatggtgggtaa 41464387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 42291849 - 42291877
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  42291849 ctagattacctttgaagaatggtgggtaa 42291877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 43125838 - 43125866
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  43125838 ctagattacctttgaagaatggtgggtaa 43125866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 44806691 - 44806719
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  44806691 ctagattacctttgaagaatggtgggtaa 44806719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 47257800 - 47257828
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  47257800 ctagattacctttgaagaatggtgggtaa 47257828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 49330044 - 49330072
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  49330044 ctagattacctttgaagaatggtgggtaa 49330072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 51102553 - 51102525
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  51102553 ctagattacctttgaagaatggtgggtaa 51102525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 51452925 - 51452897
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  51452925 ctagattacctttgaagaatggtgggtaa 51452897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 52628961 - 52628989
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  52628961 ctagattacctttgaagaatggtgggtaa 52628989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 112
Target Start/End: Complemental strand, 40435328 - 40435299
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaac 112  Q
    ||||||||||||||||||||||||||||||    
T  40435328 ctagattacctttgaagaatggtgggtaac 40435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 2275920 - 2275948
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  2275920 ctagattacctttgaagaatggtgggtaa 2275948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 2714556 - 2714584
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  2714556 ctagattacctttgaagaatggtgggtaa 2714584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 5946054 - 5946082
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  5946054 ctagattacctttgaagaatggtgggtaa 5946082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 6365993 - 6366021
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  6365993 ctagattacctttgaagaatggtgggtaa 6366021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 12032959 - 12032987
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  12032959 ctagattacctttgaagaatggtgggtaa 12032987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 17718897 - 17718869
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  17718897 ctagattacctttgaagaatggtgggtaa 17718869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 22878398 - 22878426
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  22878398 ctagattacctttgaagaatggtgggtaa 22878426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 31831130 - 31831102
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  31831130 ctagattacctttgaagaatggtgggtaa 31831102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 32114256 - 32114284
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  32114256 ctagattacctttgaagaatggtgggtaa 32114284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 32984252 - 32984224
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  32984252 ctagattacctttgaagaatggtgggtaa 32984224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 37301500 - 37301472
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  37301500 ctagattacctttgaagaatggtgggtaa 37301472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 37419947 - 37419975
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  37419947 ctagattacctttgaagaatggtgggtaa 37419975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 37956428 - 37956456
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  37956428 ctagattacctttgaagaatggtgggtaa 37956456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 41653902 - 41653930
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  41653902 ctagattacctttgaagaatggtgggtaa 41653930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 41862227 - 41862255
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  41862227 ctagattacctttgaagaatggtgggtaa 41862255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 43328714 - 43328742
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  43328714 ctagattacctttgaagaatggtgggtaa 43328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 45236740 - 45236712
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  45236740 ctagattacctttgaagaatggtgggtaa 45236712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 112
Target Start/End: Complemental strand, 41702634 - 41702605
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaac 112  Q
    ||||||||||||||||||||||||||||||    
T  41702634 ctagattacctttgaagaatggtgggtaac 41702605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 146604 - 146576
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  146604 ctagattacctttgaagaatggtgggtaa 146576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 2243465 - 2243493
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  2243465 ctagattacctttgaagaatggtgggtaa 2243493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 6019935 - 6019963
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  6019935 ctagattacctttgaagaatggtgggtaa 6019963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 14017549 - 14017521
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  14017549 ctagattacctttgaagaatggtgggtaa 14017521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 17555661 - 17555633
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  17555661 ctagattacctttgaagaatggtgggtaa 17555633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 18462188 - 18462160
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  18462188 ctagattacctttgaagaatggtgggtaa 18462160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 21366784 - 21366756
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  21366784 ctagattacctttgaagaatggtgggtaa 21366756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 22468945 - 22468917
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  22468945 ctagattacctttgaagaatggtgggtaa 22468917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 22618687 - 22618659
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  22618687 ctagattacctttgaagaatggtgggtaa 22618659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 23437599 - 23437627
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  23437599 ctagattacctttgaagaatggtgggtaa 23437627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 29478367 - 29478395
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  29478367 ctagattacctttgaagaatggtgggtaa 29478395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 29777432 - 29777404
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  29777432 ctagattacctttgaagaatggtgggtaa 29777404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 31070248 - 31070220
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  31070248 ctagattacctttgaagaatggtgggtaa 31070220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 39077552 - 39077580
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  39077552 ctagattacctttgaagaatggtgggtaa 39077580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 41632181 - 41632153
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  41632181 ctagattacctttgaagaatggtgggtaa 41632153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 41949389 - 41949417
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  41949389 ctagattacctttgaagaatggtgggtaa 41949417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 42222298 - 42222326
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  42222298 ctagattacctttgaagaatggtgggtaa 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 42557589 - 42557617
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  42557589 ctagattacctttgaagaatggtgggtaa 42557617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 43471870 - 43471842
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  43471870 ctagattacctttgaagaatggtgggtaa 43471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 47344663 - 47344691
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  47344663 ctagattacctttgaagaatggtgggtaa 47344691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 48313564 - 48313592
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  48313564 ctagattacctttgaagaatggtgggtaa 48313592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 49881238 - 49881210
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  49881238 ctagattacctttgaagaatggtgggtaa 49881210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 50457985 - 50457957
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  50457985 ctagattacctttgaagaatggtgggtaa 50457957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 50534639 - 50534667
Alignment:
Q  84 tagattacctttgaagaatggtgggtaac 112  Q
    |||||||||||||||||||||||||||||    
T  50534639 tagattacctttgaagaatggtgggtaac 50534667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 51363014 - 51363042
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  51363014 ctagattacctttgaagaatggtgggtaa 51363042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 53854604 - 53854576
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  53854604 ctagattacctttgaagaatggtgggtaa 53854576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 54805793 - 54805765
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  54805793 ctagattacctttgaagaatggtgggtaa 54805765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 55056434 - 55056406
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  55056434 ctagattacctttgaagaatggtgggtaa 55056406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 3095 - 3123
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  3095 ctagattacctttgaagaatggtgggtaa 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 2607 - 2579
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  2607 ctagattacctttgaagaatggtgggtaa 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 32568 - 32596
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  32568 ctagattacctttgaagaatggtgggtaa 32596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 39731 - 39703
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  39731 ctagattacctttgaagaatggtgggtaa 39703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 75419 - 75391
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  75419 ctagattacctttgaagaatggtgggtaa 75391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 10028496 - 10028524
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  10028496 ctagattacctttgaagaatggtgggtaa 10028524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 15877558 - 15877586
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  15877558 ctagattacctttgaagaatggtgggtaa 15877586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 20165989 - 20165961
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  20165989 ctagattacctttgaagaatggtgggtaa 20165961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 22979822 - 22979794
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  22979822 ctagattacctttgaagaatggtgggtaa 22979794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 33332797 - 33332825
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  33332797 ctagattacctttgaagaatggtgggtaa 33332825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 33839890 - 33839862
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  33839890 ctagattacctttgaagaatggtgggtaa 33839862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 45063530 - 45063502
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  45063530 ctagattacctttgaagaatggtgggtaa 45063502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 45482666 - 45482694
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  45482666 ctagattacctttgaagaatggtgggtaa 45482694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 46913117 - 46913145
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  46913117 ctagattacctttgaagaatggtgggtaa 46913145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 47740506 - 47740478
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  47740506 ctagattacctttgaagaatggtgggtaa 47740478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 48609852 - 48609824
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  48609852 ctagattacctttgaagaatggtgggtaa 48609824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 49171537 - 49171509
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  49171537 ctagattacctttgaagaatggtgggtaa 49171509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 599899 - 599927
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  599899 ctagattacctttgaagaatggtgggtaa 599927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 960079 - 960051
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  960079 ctagattacctttgaagaatggtgggtaa 960051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 1970718 - 1970746
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  1970718 ctagattacctttgaagaatggtgggtaa 1970746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 2892195 - 2892223
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  2892195 ctagattacctttgaagaatggtgggtaa 2892223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 5882513 - 5882541
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  5882513 ctagattacctttgaagaatggtgggtaa 5882541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 8615247 - 8615275
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  8615247 ctagattacctttgaagaatggtgggtaa 8615275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 16703373 - 16703401
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  16703373 ctagattacctttgaagaatggtgggtaa 16703401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 18101670 - 18101642
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  18101670 ctagattacctttgaagaatggtgggtaa 18101642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 19281230 - 19281202
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  19281230 ctagattacctttgaagaatggtgggtaa 19281202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 19415708 - 19415680
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  19415708 ctagattacctttgaagaatggtgggtaa 19415680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 22551236 - 22551208
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  22551236 ctagattacctttgaagaatggtgggtaa 22551208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 28947094 - 28947122
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  28947094 ctagattacctttgaagaatggtgggtaa 28947122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 30467778 - 30467750
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  30467778 ctagattacctttgaagaatggtgggtaa 30467750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 30743623 - 30743595
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  30743623 ctagattacctttgaagaatggtgggtaa 30743595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 29; Significance: 0.0000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 3466856 - 3466828
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  3466856 ctagattacctttgaagaatggtgggtaa 3466828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 5137722 - 5137750
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  5137722 ctagattacctttgaagaatggtgggtaa 5137750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 5184979 - 5185007
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  5184979 ctagattacctttgaagaatggtgggtaa 5185007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 15398657 - 15398629
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  15398657 ctagattacctttgaagaatggtgggtaa 15398629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 18479843 - 18479815
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  18479843 ctagattacctttgaagaatggtgggtaa 18479815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 24253389 - 24253417
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  24253389 ctagattacctttgaagaatggtgggtaa 24253417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 25831528 - 25831556
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  25831528 ctagattacctttgaagaatggtgggtaa 25831556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 40886202 - 40886174
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  40886202 ctagattacctttgaagaatggtgggtaa 40886174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 43326554 - 43326526
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  43326554 ctagattacctttgaagaatggtgggtaa 43326526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 746472 - 746500
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  746472 ctagattacctttgaagaatggtgggtaa 746500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 2325064 - 2325036
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  2325064 ctagattacctttgaagaatggtgggtaa 2325036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 4034598 - 4034626
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  4034598 ctagattacctttgaagaatggtgggtaa 4034626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 6594633 - 6594605
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  6594633 ctagattacctttgaagaatggtgggtaa 6594605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 7892863 - 7892835
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  7892863 ctagattacctttgaagaatggtgggtaa 7892835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 10424601 - 10424629
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  10424601 ctagattacctttgaagaatggtgggtaa 10424629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 12814620 - 12814648
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  12814620 ctagattacctttgaagaatggtgggtaa 12814648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 13815393 - 13815365
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  13815393 ctagattacctttgaagaatggtgggtaa 13815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 23901785 - 23901813
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  23901785 ctagattacctttgaagaatggtgggtaa 23901813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 26710351 - 26710379
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  26710351 ctagattacctttgaagaatggtgggtaa 26710379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 27024421 - 27024449
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  27024421 ctagattacctttgaagaatggtgggtaa 27024449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 27400409 - 27400437
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  27400409 ctagattacctttgaagaatggtgggtaa 27400437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 27651209 - 27651181
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  27651209 ctagattacctttgaagaatggtgggtaa 27651181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 28019996 - 28019968
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  28019996 ctagattacctttgaagaatggtgggtaa 28019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 32327367 - 32327395
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  32327367 ctagattacctttgaagaatggtgggtaa 32327395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 32608386 - 32608414
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  32608386 ctagattacctttgaagaatggtgggtaa 32608414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 38997107 - 38997135
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  38997107 ctagattacctttgaagaatggtgggtaa 38997135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 40735470 - 40735498
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  40735470 ctagattacctttgaagaatggtgggtaa 40735498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000004; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 4156240 - 4156212
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  4156240 ctagattacctttgaagaatggtgggtaa 4156212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 5980075 - 5980103
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  5980075 ctagattacctttgaagaatggtgggtaa 5980103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 5981177 - 5981205
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  5981177 ctagattacctttgaagaatggtgggtaa 5981205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 6327722 - 6327694
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  6327722 ctagattacctttgaagaatggtgggtaa 6327694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 17995126 - 17995098
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  17995126 ctagattacctttgaagaatggtgggtaa 17995098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 23221104 - 23221076
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  23221104 ctagattacctttgaagaatggtgggtaa 23221076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 23984762 - 23984790
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  23984762 ctagattacctttgaagaatggtgggtaa 23984790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 24245200 - 24245172
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  24245200 ctagattacctttgaagaatggtgggtaa 24245172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 24885508 - 24885536
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  24885508 ctagattacctttgaagaatggtgggtaa 24885536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 25058695 - 25058723
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  25058695 ctagattacctttgaagaatggtgggtaa 25058723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 26277184 - 26277212
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  26277184 ctagattacctttgaagaatggtgggtaa 26277212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 26525064 - 26525036
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  26525064 ctagattacctttgaagaatggtgggtaa 26525036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 27983762 - 27983734
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  27983762 ctagattacctttgaagaatggtgggtaa 27983734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 31040716 - 31040744
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  31040716 ctagattacctttgaagaatggtgggtaa 31040744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 31308008 - 31308036
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  31308008 ctagattacctttgaagaatggtgggtaa 31308036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 31980110 - 31980082
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  31980110 ctagattacctttgaagaatggtgggtaa 31980082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 33112992 - 33112964
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  33112992 ctagattacctttgaagaatggtgggtaa 33112964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 35692839 - 35692811
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  35692839 ctagattacctttgaagaatggtgggtaa 35692811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 38332034 - 38332006
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  38332034 ctagattacctttgaagaatggtgggtaa 38332006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 44661977 - 44662005
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  44661977 ctagattacctttgaagaatggtgggtaa 44662005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 45538160 - 45538188
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  45538160 ctagattacctttgaagaatggtgggtaa 45538188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 46616556 - 46616584
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  46616556 ctagattacctttgaagaatggtgggtaa 46616584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 46967216 - 46967188
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  46967216 ctagattacctttgaagaatggtgggtaa 46967188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 48373511 - 48373539
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  48373511 ctagattacctttgaagaatggtgggtaa 48373539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 49254150 - 49254122
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  49254150 ctagattacctttgaagaatggtgggtaa 49254122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 51403182 - 51403154
Alignment:
Q  83 ctagattacctttgaagaatggtgggtaa 111  Q
    |||||||||||||||||||||||||||||    
T  51403182 ctagattacctttgaagaatggtgggtaa 51403154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University