View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_250 (Length: 250)
Name: NF11324A_low_250
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_250 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37339147 - 37339388
Alignment:
| Q |
1 |
ggacagcatggatgacaattgctgttcttcaaattattatacaattcctggcatgaatcagcaacttcaggtctctctcatttcttttattttgtcaatt |
100 |
Q |
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| T |
37339147 |
ggacagcatggatgacaattgctgttcttcaaattattatacaattcctggcatgaatcagcaacttcaggtctctctcatttcttttattttgtcaatt |
37339246 |
T |
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| Q |
101 |
actcattttcatttgttacggatatgatttaaagttttaagtatcaaacatagtatattatccttggcaactttctgacatcaattagtcaaagagatga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
37339247 |
actcattttcatttgttacggatatgatttaaagttttaagtatcaaacatagtatattatccttggcaacttcctgacatcaattagtcaaagagatga |
37339346 |
T |
|
| Q |
201 |
ggaggacactcatcatgcttttattactcaaccattcatctc |
242 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37339347 |
ggaggacactcatcatgcttttattactcaaccattcttctc |
37339388 |
T |
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