View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_292 (Length: 246)
Name: NF11324A_low_292
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_292 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 34883052 - 34883275
Alignment:
| Q |
1 |
ttatttttgcagaagcaatgaaggatttgaaaccagaagcagacatgttagtgataaagtgagacaagaatgaagatgctccaaagcctaataacatgcg |
100 |
Q |
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| T |
34883052 |
ttatttttgcagaagcaatgaaggatttgaaaccagaagcagacatgttagtgataaagtgagacaagaatgaagatgctccaaagcctaataacatgcg |
34883151 |
T |
|
| Q |
101 |
tcgaggagcattcttaaatgtcttgtttaatagagaacatgaagaggaaccaacaacattaacagtacgaggatgtggtgtactggcacaataacaggac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
34883152 |
tcgaggagcattcttaaatgtcttgtttaatagagaacatgaagaggaaccaacaacattaacagtacgaggatgtggtgtactcgcacaataacaggac |
34883251 |
T |
|
| Q |
201 |
ataactggtaaccttagtccaaca |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
34883252 |
ataactggtaaccttagtccaaca |
34883275 |
T |
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