View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11324A_low_299 (Length: 245)

Name: NF11324A_low_299
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11324A_low_299
NF11324A_low_299
[»] chr7 (20 HSPs)
chr7 (29-245)||(21714091-21714307)
chr7 (43-245)||(21651977-21652179)
chr7 (20-245)||(21628033-21628258)
chr7 (21-230)||(21788152-21788361)
chr7 (21-245)||(21704551-21704775)
chr7 (21-176)||(21646720-21646875)
chr7 (21-241)||(21785315-21785538)
chr7 (21-245)||(21808181-21808408)
chr7 (138-240)||(21763978-21764077)
chr7 (138-241)||(21771873-21771976)
chr7 (21-181)||(21681622-21681782)
chr7 (138-241)||(21725808-21725911)
chr7 (21-245)||(21664003-21664230)
chr7 (34-153)||(21745532-21745651)
chr7 (54-245)||(21992078-21992272)
chr7 (172-245)||(21741014-21741087)
chr7 (21-181)||(15713595-15713755)
chr7 (21-89)||(21623257-21623325)
chr7 (21-89)||(21764126-21764194)
chr7 (21-174)||(21791990-21792143)
[»] scaffold0182 (2 HSPs)
scaffold0182 (21-240)||(25223-25442)
scaffold0182 (173-241)||(34446-34514)


Alignment Details
Target: chr7 (Bit Score: 113; Significance: 2e-57; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 21714307 - 21714091
Alignment:
Q  29 acttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcgatttttgag 128  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||   |||||||  ||||||| |||||| |||| |||     
T  21714307 acttctctcctttcttcagatttggattgtcatgatggataggacctaatgacacaaacttgggtgagtaatgcttctcaaaatttgttctatttctgaa 21714208  T
Q  129 atgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttgggatgccatc 228  Q
    | | ||   |||||| |||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  21714207 acggtcaaccaccctttgtatcttcggtcgtgaattttggggtgtttgcattgatttttgtagctccacaaatttttctttaatagtttgggatgccatc 21714108  T
Q  229 atttgttcaatataata 245  Q
     ||  ||||||||||||    
T  21714107 cttcattcaatataata 21714091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 245
Target Start/End: Complemental strand, 21652179 - 21651977
Alignment:
Q  43 ttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcgatttttgagatgatctgtcaccc 142  Q
    |||| ||||| ||||||||||||||||||||| | ||| || ||||| ||  |||||||   ||||||| |  ||| |||| ||||||  | || |||||    
T  21652179 ttcatatttgtattgtcatgatggataggacctattgaaacaaacttgggggtgtaatgtttctcaaaattgtttctatttctgagatactgtggcaccc 21652080  T
Q  143 tctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttgggatgccatcatttgttcaatata 242  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||   ||||||||    
T  21652079 tttgtatctttggtcgtgaattttggggtgtttgctttgatttttgtagttccacaaatttttctttaatagtttgggatgccatcattcaatcaatata 21651980  T
Q  243 ata 245  Q
    |||    
T  21651979 ata 21651977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 21628258 - 21628033
Alignment:
Q  20 caagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcg 119  Q
    |||||||| ||||||||||||| |||||||||| | || |||||||||||||||| | |||||| ||||| ||   ||||| |  | |||||  | ||      
T  21628258 caagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgacacaaacttgggtgagtaatacttcccaaaatctttttt 21628159  T
Q  120 atttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttgg 219  Q
    |||| |||||||||| | |||||| |||||||||||||||| |||| |||||||||||||||| | || || || |||||||||||||||||||||||||    
T  21628158 atttctgagatgatcggccaccctttgtatctttggtcgtgcatttcggggtgtttgctttgaattttttaactccacaaatttttctttaatagtttgg 21628059  T
Q  220 gatgccatcatttgttcaatataata 245  Q
    ||||||||||||  ||||||||||||    
T  21628058 gatgccatcattctttcaatataata 21628033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 21788361 - 21788152
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| |||||||||||| ||||| |||||  |||||||||||||||||||| |  |||| |||||| ||   |||||||  ||||||  || ||| |    
T  21788361 aagcttgtacttctctcctaacttcaaatttgtgttgtcatgatggataggacctaccgacaacaacttgggcgagtaatgcttctcaaagttttttcta 21788262  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttggg 220  Q
    ||| ||||||  |||| |||||| ||||| || ||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  21788261 tttctgagatactctgccaccctttgtattttcggtcgtgaattttggggtgtttgctttgatttttgtaactccacaaatttttcattaatagtttggg 21788162  T
Q  221 atgccatcat 230  Q
    ||||||||||    
T  21788161 atgccatcat 21788152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 21704775 - 21704551
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| |  ||||| ||||| ||   |||||||  ||||||  || ||| |    
T  21704775 aagcttgtacttctctcctaacttcagagttggattgtcatgatggataggacctatcgacactaacttgggtgagtaatgctgctcaaagttttttcta 21704676  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttggg 220  Q
     || ||||||  |||  |||||| |||||||||||||||| |||| | |||||||||||||| | || || ||  |||||||||||||||||||||||||    
T  21704675 cttctgagatactcttgcaccctttgtatctttggtcgtgcatttggaggtgtttgctttgaattttttaactcgacaaatttttctttaatagtttggg 21704576  T
Q  221 atgccatcatttgttcaatataata 245  Q
    |||||||||||  ||||||||||||    
T  21704575 atgccatcattcattcaatataata 21704551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 21646875 - 21646720
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||  |||||||| |||||||  |||||| |    
T  21646875 aagcttgtatttctctcctatcttcagctttggattgtcatgatggataggacctattgacaccaacttgggggtgtaatgctcctcaaattttgttcta 21646776  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttg 176  Q
    ||| ||||||  | || |||||| ||||||||||||||||||||||||||||||||    
T  21646775 tttctgagatactgtggcaccctttgtatctttggtcgtgaattttggggtgtttg 21646720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 21785538 - 21785315
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||| ||   |||||||  ||||||  || | | |    
T  21785538 aagcttgtacttctctcctgtcttcagatttggattgtcatgatggataggacctattgacactaacttgggtgagtaatgcttctcaaagtttttccta 21785439  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaa---tagttt 217  Q
    ||| | ||||  |||  |||||| ||||||||||||||||||||||||||| |||||||||| | || ||||| ||||| ||||| || ||   ||||||    
T  21785438 tttcttagatactcttgcaccctttgtatctttggtcgtgaattttggggtatttgctttgaattttctagctccacaatttttttttcaagggtagttt 21785339  T
Q  218 gggatgccatcatttgttcaatat 241  Q
    |||||| |||||||  ||||||||    
T  21785338 gggatgtcatcattgattcaatat 21785315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 21808181 - 21808408
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| |||||||||||| ||||||||||  |||  |||||||||||||||| | ||| |||||||| ||   |||||||  ||||| | |||||| |    
T  21808181 aagcttgtacttctctcctaacttcagatttatatttccatgatggataggacctattgataccaacttgggtgagtaatgcttctcaagatttgttcta 21808280  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaa---tagttt 217  Q
    ||| ||||||  || | |||||| ||||||||||||||||||||||||||| |||| ||||| | || ||||| |||||  |||| || ||   ||||||    
T  21808281 tttctgagatactcagccaccctttgtatctttggtcgtgaattttggggtatttgatttgaattttttagctccacaatctttttttcaagggtagttt 21808380  T
Q  218 gggatgccatcatttgttcaatataata 245  Q
    ||||| ||||||||  ||||||||||||    
T  21808381 gggattccatcattcattcaatataata 21808408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 21764077 - 21763978
Alignment:
Q  138 caccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttgggatgccatcatttgttca 237  Q
    |||||| |||||||| |||||||||||||||||||||||||||||   |||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  21764077 caccctttgtatcttgggtcgtgaattttggggtgtttgctttga---ttgtagctccacaaatttttctttaagagtttgggatgccatcattcattca 21763981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 21771976 - 21771873
Alignment:
Q  138 caccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttgggatgccatcatttgttca 237  Q
    |||||| |||||||| |||| ||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||  ||||    
T  21771976 caccctttgtatcttcggtcttgaattttggggtatttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattca 21771877  T
Q  238 atat 241  Q
    ||||    
T  21771876 atat 21771873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 21681782 - 21681622
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| |||||||||||| ||| |||| || |||| |||||||||||||||| | |||||| ||||| ||  |||||||| ||| |||  |||||| |    
T  21681782 aagcttgtacttctctcctaactttagatctgtattgccatgatggataggacctattgacacaaacttggggctgtaatgctccttaaattttgttcta 21681683  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttg 181  Q
    ||||||| ||    || |||||| |||||||||||||||||||||||||||||||| ||||    
T  21681682 tttttgacataccgtggcaccctttgtatctttggtcgtgaattttggggtgtttgatttg 21681622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 21725911 - 21725808
Alignment:
Q  138 caccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttgggatgccatcatttgttca 237  Q
    |||||| |||||||| |||| ||||||||||| | |||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||  ||||    
T  21725911 caccctttgtatcttcggtcttgaattttgggatatttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattca 21725812  T
Q  238 atat 241  Q
    ||||    
T  21725811 atat 21725808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 21664230 - 21664003
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| ||||| |||||| |||||||| || |||| |||||||||||||||| | |||||  ||||| ||   ||||| |  ||||||  || |||      
T  21664230 aagcttgtacttccctcctaacttcagatctgtattgccatgatggataggacctattgacaggaacttgggtgagtaatacttctcaaagttttttctg 21664131  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaa---tagttt 217  Q
    ||| ||||||  | || |||||| |||||||||||||||||| |||||||| |||||||||| | || ||||| ||||| ||||| || ||   ||||||    
T  21664130 tttctgagattgtgtggcaccctttgtatctttggtcgtgaactttggggtatttgctttgaattttctagctccacaatttttttttcaagggtagttt 21664031  T
Q  218 gggatgccatcatttgttcaatataata 245  Q
    ||||||||||||||  ||||||||||||    
T  21664030 gggatgccatcattctttcaatataata 21664003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 21745651 - 21745532
Alignment:
Q  34 tctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcgatttttgagatgat 133  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| ||   |||||||  ||||||| |||||| |||| ||||||| |    
T  21745651 tctcctgtctttagatttggattgtcatgatggataggacctaatgacaccaacttgggtgagtaatgcttctcaaaatttgttctatttatgagatggt 21745552  T
Q  134 ctgtcaccctctgtatcttt 153  Q
    ||  |||||| |||||||||    
T  21745551 ctaccaccctttgtatcttt 21745532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 245
Target Start/End: Complemental strand, 21992272 - 21992078
Alignment:
Q  54 attgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcgatttttgagatgatctgtcaccctctgtatcttt 153  Q
    |||| |||||||||||||||| | ||||||||| || ||   ||| |||  ||||||   | ||| |||||||||||  |||| |||||| ||||||| |    
T  21992272 attgccatgatggataggacctattgacaccaatttgggtgagtagtgcttctcaaagtcttttctatttttgagatactctgccaccctttgtatctgt 21992173  T
Q  154 ggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaa---tagtttgggatgccatcatttgttcaatataata 245  Q
    | |||||||||||||||| |||||||||| | || ||||| ||||| |||||||| ||    |||||||||||||||||||  ||||||||||||    
T  21992172 gttcgtgaattttggggtatttgctttgaattttctagctccacaattttttcttcaagggaagtttgggatgccatcattcattcaatataata 21992078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 21741087 - 21741014
Alignment:
Q  172 gtttgctttgattgttgtagctgcacaaatttttctttaatagtttgggatgccatcatttgttcaatataata 245  Q
    ||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  21741087 gtttgctttaatttttgtagctccacaattttttctttaatagtttgggatgccatcattcattcaatataata 21741014  T

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Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 15713755 - 15713595
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| ||||||| |||  ||| ||||||| |||||||||||||||||| || | ||| |||||||| ||   |||||||| |||| || || | |      
T  15713755 aagcttgtacttctcccctgactttagatttgtattgtcatgatggatagggcctattgaaaccaacttaggtgcgtaatgcatctcataatttttactt 15713656  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttg 181  Q
    ||| ||||||   ||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  15713655 tttctgagatagcctggcaccctttgtatctttggtcgtgaactttggggtgtttgctttg 15713595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 21623325 - 21623257
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaactt 89  Q
    ||||||| |||||||||||| ||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  21623325 aagcttgtacttctctcctaacttcagatttgtattgccatgatggataggacctattgacaccaactt 21623257  T

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Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 21764194 - 21764126
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaactt 89  Q
    ||||||| |||||||||||| |||||||| ||   ||||||||||||||||||| | ||||| ||||||    
T  21764194 aagcttgtacttctctcctaacttcagatctgatctgtcatgatggataggacctattgacaacaactt 21764126  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 21792143 - 21791990
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgcacctcaaaacttgttcga 120  Q
    ||||||| |||||||||||| || ||||| || | || |||||||||| ||||| | ||| || ||| | || |||||||||  ||||||| ||  ||      
T  21792143 aagcttgtacttctctcctaactccagatctgtactgccatgatggatgggacctattgatacaaaccttgggatgtaatgcttctcaaaattttctctc 21792044  T
Q  121 tttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtt 174  Q
    ||| ||||||  |||| |||||| ||||||||||||  |||| || ||||||||    
T  21792043 tttctgagatactctgccaccctttgtatctttggttttgaacttgggggtgtt 21791990  T

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Target: scaffold0182 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 25442 - 25223
Alignment:
Q  21 aagcttgaacttctctcctatcttcagatttggattgtcatgatggataggaccaaatgacaccaacttcggaatgtaatgca-cctcaaaacttgttcg 119  Q
    ||||||| |||||||||||| ||||||||||  ||||||||||||||||||||| | |||||||||||| ||  |||| | |  |||||||  ||| |      
T  25442 aagcttgtacttctctcctaacttcagatttttattgtcatgatggataggacctattgacaccaacttgggtttgtagtacttcctcaaat-ttggtat 25344  T
Q  120 atttttgagatgatctgtcaccctctgtatctttggtcgtgaattttggggtgtttgctttgattgttgtagctgcacaaatttttctttaatagtttgg 219  Q
     ||| || | | || || |||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||| | ||| ||||||||||| |||||||    
T  25343 ctttctgcggtaatatgccaccctttgtatcttgggtggtgaattttggggtgtttgctttgatttttgtagctcctcaattttttctttaagagtttgg 25244  T
Q  220 gatgccatcatttgttcaata 240  Q
    | ||||||||||  |||||||    
T  25243 gctgccatcattcattcaata 25223  T

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Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 34514 - 34446
Alignment:
Q  173 tttgctttgattgttgtagctgcacaaatttttctttaatagtttgggatgccatcatttgttcaatat 241  Q
    |||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||  ||||||||    
T  34514 tttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattcaatat 34446  T

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