View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_318 (Length: 243)
Name: NF11324A_low_318
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_318 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 23 - 234
Target Start/End: Complemental strand, 26976622 - 26976414
Alignment:
| Q |
23 |
gctacttcacctacttcaacactatgctttggtctttctcgttcaactagcactaataaggctcatagtggatttctagggttctccaaaaggtaagctt |
122 |
Q |
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| T |
26976622 |
gctacttcacctacttcaacactatgctttggtctttctcgttcaactagcactaa---ggctcatagtggattcctagggttctccaaaaggtaagctt |
26976526 |
T |
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| Q |
123 |
aatagtggattctaccttggccaacttgccaagggagttctactagcttagtgcatgtttcgtatcacggtgattagtagttaaatgaaattagtagcat |
222 |
Q |
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|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |
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| T |
26976525 |
aatagtcgattctaccttggccaactggccaagggagttctactagcttagtgcatgtttcgtatcacggtgatcagtagttaaacgaaattagtagcat |
26976426 |
T |
|
| Q |
223 |
tacgatattgtt |
234 |
Q |
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|||||| ||||| |
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| T |
26976425 |
tacgattttgtt |
26976414 |
T |
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