View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_320 (Length: 243)
Name: NF11324A_low_320
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_320 |
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Alignment Details
Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 70 - 226
Target Start/End: Complemental strand, 22837942 - 22837786
Alignment:
| Q |
70 |
gagaaagaaaagaaatcataccatgaagaagccaaaacaagctaccattaaccatgtaatcaaagacaagcaatttttcatcccttgcaaaataataagc |
169 |
Q |
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| T |
22837942 |
gagaaagaaaagaaatcataccatgaagaagccaaaacaagctaccattaaccatgtaatcaaagacaagcaatttttcatcccttgcaaaataataagc |
22837843 |
T |
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| Q |
170 |
ctttaagctaacaatgttggagtgtcttaactttccaagaacttccattctatgctc |
226 |
Q |
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||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| |
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| T |
22837842 |
ctttaagctaacaatgttggagtgttttaactttccaagaatttccattctctgctc |
22837786 |
T |
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