View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_343 (Length: 241)
Name: NF11324A_low_343
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_343 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 45929717 - 45929488
Alignment:
| Q |
1 |
aagaaacaaagagtagaaaactgcttgctcaaagagataggacaattttttatctcacagcagaaggacaagagcactattatgagtgaagcattggcat |
100 |
Q |
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| T |
45929717 |
aagaaataaagagtagaaaactgcttgctcaaaaagataggactattttttatctcacagcagaaggacaagagcactattatgagtgaagcattggcat |
45929618 |
T |
|
| Q |
101 |
aaaataaatacatatcatatcaccaattcagacaagtgtgttttcaatgacctaacctcacacataagattgtactttccatcctggtttctcattctca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
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| T |
45929617 |
aaaataaatacatatcatatcaccaattcagacaagtgtgttttcaatgacctaacctcaaacataagattgtactttccatcccggtttctcattctca |
45929518 |
T |
|
| Q |
201 |
aatatgattgacatgcttcagggtcttctc |
230 |
Q |
| |
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|||||||||||||||||||||||||||||| |
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| T |
45929517 |
aatatgattgacatgcttcagggtcttctc |
45929488 |
T |
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