View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_358 (Length: 237)
Name: NF11324A_low_358
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_358 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 11565507 - 11565736
Alignment:
| Q |
1 |
gcactacaaattgttggaattaaacacctgtttcttctttactcaatcagttatcaatacctattatctatccattcacgtgaaacacaacttcttcgac |
100 |
Q |
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| T |
11565507 |
gcactacaaattgttggaattaaacacttgtttcttctttactcaatcagttatcaatacctattatctatccattcacgtgaaacacaacttcttcgac |
11565606 |
T |
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| Q |
101 |
gaacccgaactaccacaacgcagttaatcctctgttccccataactcaccacaatctgcgccatttccgtcgttcatgtctatgcaccatttcccaccct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11565607 |
gaacccgaactaccacaacgcagttaatcctctgttccccattactcaccacaatctgcgccatttccgtcgttcatgtctatgcaccatttcccaccct |
11565706 |
T |
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| Q |
201 |
cgatctaatctctatccgttcacttcactc |
230 |
Q |
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||||||||| |||||||||||| ||||||| |
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| T |
11565707 |
cgatctaatatctatccgttcatttcactc |
11565736 |
T |
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