View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_386 (Length: 230)
Name: NF11324A_low_386
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_386 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 7094443 - 7094228
Alignment:
| Q |
7 |
ataagaactacagcaagcacattgatattgttaaaaatgatgtatgtattttgagcaagcaacgaagtgatgaaattgtgggcgatacggttgataaaat |
106 |
Q |
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| T |
7094443 |
ataagaactacagcaaacacattgatattgttaaaaatgatgtatgtattttgagcaagcaatgaagtgatgaaattgtgggcgatacggttgataaaat |
7094344 |
T |
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| Q |
107 |
tgaaaactttcctattacacctctaggtaatgccaccaattttagtttagaataaacggtgatagtgaattcacatcaataagatttaaaactccaaaat |
206 |
Q |
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| T |
7094343 |
tgaaa-ctttcctattacacctctaggtaatgccaccaattttagtttagaataaacggtgatagtgaattcacatcaataagatttaaaactccaaaat |
7094245 |
T |
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| Q |
207 |
atcgctcgaagttacat |
223 |
Q |
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||||||||||||||||| |
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| T |
7094244 |
atcgctcgaagttacat |
7094228 |
T |
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