View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_397 (Length: 230)
Name: NF11324A_low_397
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_397 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 2340816 - 2340590
Alignment:
| Q |
1 |
ttttttaagggtcaaaatgagaagcaagaaaattaggaataatacaataaaacttcattttttactacgacaaaattcatttattattagaaatgctaag |
100 |
Q |
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| T |
2340816 |
ttttttaagggtcaaaatgagaagcaagaaaattacgaataatacaataaaacttcattttttattacgacaaaattcatttattattagaaatgctaag |
2340717 |
T |
|
| Q |
101 |
ggttcaccctcgaaaaattcatttatcaattttaaatagagagaatcctaactcatattaaac--acactataataataactttatttttctattaatta |
198 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
2340716 |
ggttcaccctcgaaaaattcatttatcaatttgaaatagagagaatcctaactcatattaaacacacactataataataactttatttttctattaatta |
2340617 |
T |
|
| Q |
199 |
gtttttggatttgtttatgttgtaggt |
225 |
Q |
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||||||||||||||||||||||||||| |
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| T |
2340616 |
gtttttggatttgtttatgttgtaggt |
2340590 |
T |
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