View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_434 (Length: 226)
Name: NF11324A_low_434
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_434 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 5738103 - 5738285
Alignment:
| Q |
1 |
tttgccgcagttaagctcaccggatattgttattccggtcatgcttagacacattcaacttaatattgagcccacgaggtaaatacttgttatttacatc |
100 |
Q |
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| T |
5738103 |
tttgccgcagttaagctcaccggatattgttattccggtcttgcttagacacattcaacttaatattgagcccacgaggtaaatacttgttatttacatc |
5738202 |
T |
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| Q |
101 |
actccataattgtgatttagatttcactcggtcaatagttagggacgttagttggactaagatcggataattcaattttcaaa |
183 |
Q |
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| T |
5738203 |
actccataattgtgatttagatttcactcaatcaatagttagggacgttagttggactaagatcggataattcaattttcaaa |
5738285 |
T |
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