View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_447 (Length: 222)
Name: NF11324A_low_447
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_447 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 30 - 222
Target Start/End: Original strand, 31937456 - 31937648
Alignment:
| Q |
30 |
cagatggaaattgaggtaaagagttaagagctttactaacttttgtaggaggaaagtaaagtgagaaggacaaaaggagagagagtgaagtttagaagaa |
129 |
Q |
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| T |
31937456 |
cagatggaaattgaggtaaagagttaagagctttactaacttttgtaggaggaaagtaaagtgagaaggacaaaaggagagagagtgaagtttagaagaa |
31937555 |
T |
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| Q |
130 |
acatagctaatgttttgtgtgagagtgcacttaagagatggagtgagtagtagggtggaaaaagggtaaacaaagacaactaggtagcgtgga |
222 |
Q |
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| T |
31937556 |
acatagctaatgttttgtgtgagagtgcatttaagagatgaagtgagtagtaggctggaaaaagggtaaacaaagacaactaggtagcgtgga |
31937648 |
T |
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