View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_459 (Length: 218)
Name: NF11324A_low_459
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_459 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 9457309 - 9457146
Alignment:
| Q |
48 |
gaaaatcaagattaatagtaatttataaacattttatctctcccctacacaaaacacaaacttgagatcggtaacaaaatgagtgttgagatttttatta |
147 |
Q |
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| T |
9457309 |
gaaaatcaagattaattgtaatttataaacattttatctctcccctacgcaaaacacaaacttgagatcggtaacaaaatgagtgttgagatttttatta |
9457210 |
T |
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| Q |
148 |
ccgtattccaaaatggctatatgtgatttttattacaatctaatgatcatctataaagtaaaca |
211 |
Q |
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| T |
9457209 |
ccgtattccaaaacggctatatgtgatttttattacaatctaatgatcatctataaagtaaaca |
9457146 |
T |
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