View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324A_low_473 (Length: 212)
Name: NF11324A_low_473
Description: NF11324A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324A_low_473 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 212
Target Start/End: Original strand, 7176594 - 7176799
Alignment:
| Q |
7 |
caaataactcaaaagatactttatgtttttctgagtttgattctttgtgggacaagcacatctaagaggaacgagtagttttctaccaggatatacatca |
106 |
Q |
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| T |
7176594 |
caaataactcaaaagatactttatgtttttctgagtttgattctttgtaggacaagcacatctaagaggaacaagtagttttctaccaggatatacatca |
7176693 |
T |
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| Q |
107 |
ccaggattatgattttcatgcatcaaagcttgacatgttgaaagtccttcaaaagtgttgttagcaactataaaataagtgtctgtgttttgaaaaacat |
206 |
Q |
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| T |
7176694 |
ccaggattatgattttcatgcatcaaagcttgacatgttgaaagtccttcaaaagtgttgttagcaactataaaataagtgtctgtgttttgaaaaacat |
7176793 |
T |
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| Q |
207 |
aggatg |
212 |
Q |
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|||||| |
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| T |
7176794 |
aggatg |
7176799 |
T |
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