View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11324_high_3 (Length: 251)
Name: NF11324_high_3
Description: NF11324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11324_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 34857386 - 34857149
Alignment:
| Q |
1 |
agccatcgtcttttctgatgttagatgaaggtcagaagtatcatatacacagttgtatagatgaaataaatagacatttaaagaatcgcggtctctggat |
100 |
Q |
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| T |
34857386 |
agccatcgtcttttctgatgttagatgaaggtcagaagtatcatatacacagttgtatagatgaaataaatagacatttaaagaatcgcggtctctggat |
34857287 |
T |
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| Q |
101 |
gatgttggacaactttttcctctgttgtgcccttcaaaaggagaagggggtggaatatatgcaatagtaatcactaacagttctataatatgaatatccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
34857286 |
gatgttggacaactttttcctctgttgtgcccttcaaaaggagaagggggtggaatatatgcaatagtaatccctaacagttctataatatgaatatccc |
34857187 |
T |
|
| Q |
201 |
ttgactattaaagttggtaactgttatgcagcctacct |
238 |
Q |
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||||||||||||||| |||||||||||||||||||||| |
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| T |
34857186 |
ttgactattaaagtttgtaactgttatgcagcctacct |
34857149 |
T |
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