View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11325_low_7 (Length: 305)

Name: NF11325_low_7
Description: NF11325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11325_low_7
NF11325_low_7
[»] chr7 (59 HSPs)
chr7 (1-291)||(39123871-39124161)
chr7 (1-162)||(40463858-40464013)
chr7 (1-160)||(47716440-47716596)
chr7 (1-161)||(42805505-42805662)
chr7 (1-162)||(21172007-21172161)
chr7 (2-161)||(42391099-42391251)
chr7 (1-161)||(43557453-43557611)
chr7 (1-161)||(32758242-32758395)
chr7 (1-160)||(10693073-10693225)
chr7 (1-149)||(2541030-2541174)
chr7 (1-148)||(33871922-33872063)
chr7 (72-161)||(27889315-27889402)
chr7 (1-149)||(22698978-22699124)
chr7 (1-161)||(27629615-27629770)
chr7 (1-161)||(42798650-42798805)
chr7 (26-161)||(7879644-7879774)
chr7 (1-161)||(19265796-19265949)
chr7 (1-161)||(34626207-34626361)
chr7 (1-160)||(48735122-48735275)
chr7 (1-159)||(11617589-11617742)
chr7 (26-147)||(18512466-18512581)
chr7 (1-122)||(46354175-46354293)
chr7 (9-159)||(29907408-29907552)
chr7 (1-141)||(28362164-28362299)
chr7 (1-145)||(3469190-3469333)
chr7 (6-159)||(18747472-18747621)
chr7 (1-149)||(35334827-35334968)
chr7 (1-141)||(13805083-13805217)
chr7 (1-159)||(16341259-16341413)
chr7 (3-161)||(32233134-32233286)
chr7 (73-148)||(45018935-45019012)
chr7 (1-161)||(19426889-19427043)
chr7 (51-140)||(38604558-38604641)
chr7 (1-149)||(47077866-47078007)
chr7 (1-140)||(28078152-28078285)
chr7 (97-161)||(13792149-13792213)
chr7 (1-149)||(14732832-14732976)
chr7 (73-149)||(21566485-21566560)
chr7 (1-160)||(23419674-23419828)
chr7 (75-162)||(31591107-31591192)
chr7 (79-135)||(33500569-33500625)
chr7 (1-139)||(19266431-19266564)
chr7 (51-162)||(35787267-35787372)
chr7 (1-148)||(42476854-42476994)
chr7 (75-160)||(23231609-23231692)
chr7 (1-71)||(42495919-42495989)
chr7 (11-149)||(38262207-38262340)
chr7 (1-159)||(11741776-11741927)
chr7 (1-130)||(14099036-14099160)
chr7 (1-130)||(14409053-14409177)
chr7 (1-71)||(18327015-18327085)
chr7 (26-140)||(35203445-35203556)
chr7 (97-130)||(1408529-1408562)
chr7 (1-62)||(7193066-7193127)
chr7 (117-162)||(25434112-25434157)
chr7 (3-135)||(7644939-7645066)
chr7 (109-148)||(42495874-42495913)
chr7 (1-113)||(5180202-5180311)
chr7 (113-161)||(36602535-36602583)
[»] chr2 (59 HSPs)
chr2 (1-160)||(10543679-10543835)
chr2 (1-161)||(24200622-24200779)
chr2 (1-160)||(14530299-14530455)
chr2 (1-162)||(8455314-8455470)
chr2 (1-164)||(5841009-5841169)
chr2 (1-163)||(9671161-9671317)
chr2 (1-129)||(12023950-12024072)
chr2 (1-161)||(25249737-25249891)
chr2 (1-162)||(21779259-21779413)
chr2 (1-161)||(17896240-17896396)
chr2 (11-161)||(14444720-14444864)
chr2 (11-161)||(10546153-10546299)
chr2 (1-161)||(21377073-21377227)
chr2 (1-148)||(7214515-7214659)
chr2 (1-161)||(17667983-17668138)
chr2 (1-160)||(25079717-25079872)
chr2 (36-161)||(36871509-36871627)
chr2 (1-160)||(23397747-23397899)
chr2 (1-162)||(11514417-11514572)
chr2 (1-160)||(14544044-14544201)
chr2 (1-161)||(17623545-17623700)
chr2 (1-129)||(22371038-22371158)
chr2 (87-162)||(23488545-23488620)
chr2 (1-157)||(4516354-4516505)
chr2 (97-162)||(44643595-44643660)
chr2 (1-140)||(99285-99417)
chr2 (1-140)||(31158459-31158595)
chr2 (75-160)||(40762234-40762317)
chr2 (5-149)||(25641487-25641625)
chr2 (99-159)||(40579750-40579810)
chr2 (1-160)||(17380238-17380390)
chr2 (9-148)||(19614981-19615116)
chr2 (3-149)||(24859999-24860138)
chr2 (75-161)||(15296405-15296490)
chr2 (1-98)||(29419945-29420043)
chr2 (100-162)||(34080176-34080238)
chr2 (100-146)||(34766330-34766376)
chr2 (1-123)||(5450266-5450384)
chr2 (75-147)||(24890463-24890533)
chr2 (75-136)||(44449407-44449467)
chr2 (80-140)||(19185763-19185823)
chr2 (1-148)||(19977726-19977868)
chr2 (1-161)||(27573602-27573756)
chr2 (1-162)||(39914304-39914460)
chr2 (1-157)||(45235820-45235972)
chr2 (105-148)||(8575975-8576018)
chr2 (79-141)||(32781307-32781367)
chr2 (1-141)||(33795266-33795401)
chr2 (99-158)||(41409936-41409995)
chr2 (106-160)||(3633708-3633762)
chr2 (112-162)||(22371199-22371249)
chr2 (75-160)||(25632561-25632644)
chr2 (1-71)||(44604835-44604905)
chr2 (99-140)||(24059016-24059057)
chr2 (97-149)||(26684631-26684683)
chr2 (112-149)||(124925-124962)
chr2 (1-62)||(17705476-17705537)
chr2 (113-161)||(760066-760114)
chr2 (113-161)||(23052964-23053012)
[»] chr3 (61 HSPs)
chr3 (1-162)||(13628788-13628946)
chr3 (1-163)||(29366717-29366876)
chr3 (1-161)||(26869710-26869864)
chr3 (1-140)||(46421055-46421191)
chr3 (1-161)||(13730601-13730758)
chr3 (1-140)||(8247707-8247843)
chr3 (1-161)||(40272811-40272966)
chr3 (1-161)||(34420642-34420798)
chr3 (1-161)||(5173718-5173874)
chr3 (1-159)||(22609769-22609921)
chr3 (1-162)||(16735444-16735599)
chr3 (6-161)||(516417-516570)
chr3 (3-159)||(22122918-22123067)
chr3 (1-160)||(39203519-39203671)
chr3 (26-148)||(10795435-10795554)
chr3 (1-161)||(1217093-1217246)
chr3 (1-158)||(26573130-26573282)
chr3 (3-161)||(53996564-53996718)
chr3 (75-160)||(45786214-45786299)
chr3 (75-161)||(54484765-54484849)
chr3 (1-161)||(25944472-25944628)
chr3 (1-150)||(6411832-6411975)
chr3 (75-158)||(353351-353434)
chr3 (1-140)||(9607206-9607342)
chr3 (34-149)||(14986993-14987105)
chr3 (75-161)||(34771363-34771447)
chr3 (9-159)||(45139479-45139624)
chr3 (75-161)||(49013472-49013558)
chr3 (1-141)||(30928166-30928301)
chr3 (27-160)||(31592878-31593004)
chr3 (1-161)||(52926218-52926364)
chr3 (1-89)||(10870021-10870105)
chr3 (75-161)||(15797294-15797378)
chr3 (77-163)||(25517167-25517251)
chr3 (9-140)||(33926094-33926220)
chr3 (1-149)||(7696903-7697039)
chr3 (1-163)||(12914032-12914189)
chr3 (51-129)||(47624095-47624167)
chr3 (75-161)||(54374344-54374429)
chr3 (80-149)||(829453-829521)
chr3 (97-161)||(24851300-24851364)
chr3 (75-149)||(45948849-45948921)
chr3 (100-162)||(30452892-30452954)
chr3 (105-162)||(10484614-10484671)
chr3 (96-161)||(44403554-44403619)
chr3 (79-156)||(55401254-55401330)
chr3 (1-147)||(7942993-7943134)
chr3 (5-139)||(12525414-12525543)
chr3 (96-162)||(40968611-40968677)
chr3 (1-96)||(45620890-45620983)
chr3 (112-161)||(47624208-47624257)
chr3 (100-161)||(50624952-50625013)
chr3 (107-162)||(45416932-45416986)
chr3 (1-71)||(53062041-53062112)
chr3 (1-110)||(4495714-4495818)
chr3 (75-140)||(9276338-9276400)
chr3 (97-139)||(46169988-46170030)
chr3 (117-163)||(54032568-54032614)
chr3 (117-161)||(4495675-4495719)
chr3 (97-157)||(35417998-35418058)
chr3 (117-161)||(43956471-43956515)
[»] chr6 (32 HSPs)
chr6 (3-161)||(29355854-29356009)
chr6 (1-161)||(12221913-12222071)
chr6 (1-161)||(9161104-9161260)
chr6 (1-162)||(1354755-1354909)
chr6 (1-161)||(1346945-1347098)
chr6 (1-161)||(2166409-2166566)
chr6 (1-161)||(2178042-2178199)
chr6 (79-162)||(12885967-12886050)
chr6 (80-161)||(12892064-12892145)
chr6 (75-160)||(7947371-7947455)
chr6 (98-161)||(6808468-6808531)
chr6 (99-162)||(23930125-23930188)
chr6 (87-149)||(3116140-3116202)
chr6 (1-149)||(3815088-3815231)
chr6 (1-157)||(13904984-13905133)
chr6 (100-160)||(10734905-10734965)
chr6 (97-161)||(13267797-13267861)
chr6 (12-160)||(17432332-17432483)
chr6 (75-161)||(26097210-26097294)
chr6 (1-122)||(6024214-6024332)
chr6 (100-160)||(11395836-11395895)
chr6 (97-140)||(24097649-24097692)
chr6 (75-130)||(24734694-24734749)
chr6 (75-161)||(25557775-25557859)
chr6 (87-149)||(14975101-14975163)
chr6 (1-138)||(14553493-14553626)
chr6 (97-158)||(15866041-15866102)
chr6 (1-64)||(8409224-8409287)
chr6 (1-64)||(14975171-14975234)
chr6 (97-140)||(32579497-32579540)
chr6 (75-116)||(2755466-2755507)
chr6 (81-160)||(383760-383837)
[»] chr5 (53 HSPs)
chr5 (1-162)||(38879562-38879720)
chr5 (1-161)||(43334183-43334340)
chr5 (1-140)||(27328733-27328869)
chr5 (1-162)||(41014300-41014455)
chr5 (1-162)||(4619102-4619260)
chr5 (7-163)||(32703411-32703560)
chr5 (1-161)||(24448871-24449026)
chr5 (1-161)||(8169983-8170136)
chr5 (3-161)||(19142942-19143094)
chr5 (80-160)||(12575660-12575739)
chr5 (1-161)||(35710294-35710447)
chr5 (29-160)||(13801767-13801895)
chr5 (51-160)||(7097760-7097863)
chr5 (97-162)||(16957386-16957451)
chr5 (89-149)||(25622524-25622584)
chr5 (34-149)||(43574620-43574730)
chr5 (75-162)||(29334447-29334533)
chr5 (1-146)||(2838759-2838899)
chr5 (1-162)||(208925-209081)
chr5 (87-159)||(12006329-12006401)
chr5 (75-159)||(20135656-20135740)
chr5 (1-149)||(39301104-39301247)
chr5 (100-162)||(3771414-3771476)
chr5 (35-149)||(7368413-7368520)
chr5 (75-161)||(12477119-12477204)
chr5 (75-160)||(34154814-34154897)
chr5 (87-140)||(10306494-10306546)
chr5 (96-157)||(21784335-21784396)
chr5 (1-140)||(22600435-22600569)
chr5 (75-149)||(16880658-16880730)
chr5 (1-162)||(22861667-22861820)
chr5 (1-63)||(37024646-37024708)
chr5 (4-149)||(1850624-1850763)
chr5 (96-161)||(19093884-19093949)
chr5 (1-160)||(1565412-1565566)
chr5 (101-161)||(16028623-16028683)
chr5 (1-161)||(28516432-28516588)
chr5 (101-160)||(30877564-30877623)
chr5 (100-163)||(39801591-39801654)
chr5 (75-161)||(11657698-11657783)
chr5 (104-161)||(10943844-10943900)
chr5 (97-138)||(21542489-21542530)
chr5 (109-162)||(32354211-32354264)
chr5 (5-112)||(22907913-22908014)
chr5 (1-64)||(23974761-23974824)
chr5 (96-154)||(4654421-4654479)
chr5 (109-158)||(13774949-13774998)
chr5 (100-161)||(24903695-24903756)
chr5 (87-156)||(39079755-39079823)
chr5 (75-149)||(42924841-42924917)
chr5 (87-162)||(24313570-24313645)
chr5 (87-162)||(24355907-24355982)
chr5 (97-149)||(30006397-30006449)
[»] chr8 (51 HSPs)
chr8 (1-160)||(13160683-13160836)
chr8 (1-162)||(39460992-39461150)
chr8 (1-149)||(21070708-21070856)
chr8 (1-149)||(20284080-20284227)
chr8 (1-162)||(36720777-36720933)
chr8 (1-161)||(28817625-28817780)
chr8 (1-161)||(35261660-35261815)
chr8 (1-149)||(12670261-12670402)
chr8 (1-159)||(45071246-45071398)
chr8 (1-149)||(7136538-7136683)
chr8 (1-161)||(30454096-30454249)
chr8 (1-141)||(24365078-24365214)
chr8 (1-158)||(44781506-44781660)
chr8 (1-161)||(6760803-6760960)
chr8 (1-149)||(18164771-18164913)
chr8 (1-160)||(17823557-17823711)
chr8 (38-161)||(20869941-20870061)
chr8 (1-162)||(26954113-26954272)
chr8 (1-162)||(44530130-44530286)
chr8 (26-161)||(5135289-5135418)
chr8 (1-149)||(29521696-29521839)
chr8 (1-137)||(20869523-20869650)
chr8 (1-148)||(2626500-2626645)
chr8 (1-161)||(25250503-25250660)
chr8 (75-158)||(29877146-29877227)
chr8 (3-159)||(42083699-42083851)
chr8 (97-162)||(12625962-12626027)
chr8 (1-140)||(24245432-24245564)
chr8 (75-147)||(17250888-17250960)
chr8 (79-149)||(16225075-16225145)
chr8 (1-71)||(28407397-28407467)
chr8 (1-161)||(8897763-8897918)
chr8 (80-149)||(16013511-16013580)
chr8 (104-161)||(40444845-40444902)
chr8 (97-161)||(26102589-26102653)
chr8 (2-162)||(31457155-31457309)
chr8 (75-149)||(5689683-5689755)
chr8 (97-160)||(28407475-28407538)
chr8 (100-149)||(27507985-27508034)
chr8 (75-116)||(43942376-43942417)
chr8 (97-161)||(35107310-35107374)
chr8 (75-149)||(8483949-8484021)
chr8 (3-130)||(11748282-11748406)
chr8 (6-119)||(23000260-23000365)
chr8 (111-161)||(27468091-27468141)
chr8 (75-149)||(44742529-44742602)
chr8 (75-147)||(19729392-19729462)
chr8 (75-149)||(26457781-26457851)
chr8 (93-146)||(18595906-18595959)
chr8 (26-149)||(389649-389769)
chr8 (99-159)||(36486567-36486627)
[»] chr1 (68 HSPs)
chr1 (1-162)||(30395724-30395882)
chr1 (1-161)||(18944647-18944805)
chr1 (1-146)||(27201651-27201793)
chr1 (7-141)||(11596523-11596651)
chr1 (1-162)||(34725096-34725250)
chr1 (1-161)||(46247952-46248107)
chr1 (11-162)||(10668239-10668387)
chr1 (3-161)||(38478281-38478432)
chr1 (1-162)||(20004088-20004246)
chr1 (1-162)||(27474285-27474440)
chr1 (13-162)||(35005139-35005285)
chr1 (1-160)||(35117765-35117922)
chr1 (1-148)||(32632569-32632710)
chr1 (1-149)||(46991808-46991951)
chr1 (1-148)||(47214515-47214655)
chr1 (1-162)||(14617042-14617198)
chr1 (1-161)||(6925104-6925259)
chr1 (1-157)||(18724549-18724699)
chr1 (1-162)||(19414443-19414597)
chr1 (1-149)||(18741968-18742115)
chr1 (75-160)||(4349713-4349796)
chr1 (1-162)||(9939465-9939624)
chr1 (1-146)||(23768334-23768474)
chr1 (11-149)||(35253198-35253329)
chr1 (75-149)||(42304218-42304292)
chr1 (87-161)||(50606488-50606562)
chr1 (1-164)||(41319802-41319960)
chr1 (75-130)||(19932783-19932838)
chr1 (1-149)||(45402099-45402243)
chr1 (1-162)||(6983809-6983963)
chr1 (1-149)||(2435797-2435941)
chr1 (29-158)||(22324925-22325049)
chr1 (1-149)||(45812548-45812689)
chr1 (1-161)||(19701574-19701730)
chr1 (75-149)||(31442400-31442473)
chr1 (1-161)||(8197047-8197202)
chr1 (1-161)||(12126836-12126989)
chr1 (75-157)||(10378738-10378818)
chr1 (79-161)||(15505643-15505722)
chr1 (38-161)||(31382213-31382330)
chr1 (35-158)||(15511150-15511271)
chr1 (1-146)||(17470361-17470500)
chr1 (1-161)||(20036224-20036379)
chr1 (1-138)||(25468285-25468417)
chr1 (75-162)||(20999848-20999933)
chr1 (1-125)||(22930104-22930221)
chr1 (97-161)||(30555210-30555274)
chr1 (75-161)||(1517310-1517394)
chr1 (75-161)||(23796540-23796624)
chr1 (75-161)||(43768214-43768298)
chr1 (1-130)||(25290167-25290300)
chr1 (100-162)||(33594129-33594191)
chr1 (1-161)||(50811943-50812099)
chr1 (1-111)||(33222988-33223093)
chr1 (1-141)||(44485128-44485263)
chr1 (97-149)||(4587574-4587626)
chr1 (97-141)||(30682907-30682951)
chr1 (75-162)||(19974072-19974158)
chr1 (1-161)||(22327103-22327255)
chr1 (75-157)||(39214961-39215042)
chr1 (87-148)||(45264411-45264471)
chr1 (78-130)||(6358199-6358250)
chr1 (75-161)||(35019305-35019388)
chr1 (106-160)||(25554742-25554796)
chr1 (102-130)||(3060003-3060031)
chr1 (105-161)||(16120819-16120875)
chr1 (1-41)||(40424746-40424786)
chr1 (113-161)||(50760239-50760287)
[»] chr4 (78 HSPs)
chr4 (1-161)||(5648240-5648394)
chr4 (1-159)||(6430627-6430779)
chr4 (1-162)||(16911543-16911701)
chr4 (1-161)||(54175044-54175201)
chr4 (1-160)||(44363130-44363286)
chr4 (1-161)||(16408600-16408757)
chr4 (1-161)||(30639361-30639515)
chr4 (1-150)||(54730230-54730377)
chr4 (1-161)||(30352579-30352745)
chr4 (1-149)||(40915810-40915952)
chr4 (1-161)||(47528529-47528682)
chr4 (1-161)||(48598824-48598977)
chr4 (1-160)||(20224965-20225117)
chr4 (92-162)||(47482848-47482918)
chr4 (1-130)||(5306694-5306817)
chr4 (1-161)||(23501774-23501925)
chr4 (1-161)||(11054147-11054300)
chr4 (37-161)||(20639657-20639777)
chr4 (1-149)||(21646945-21647090)
chr4 (12-158)||(29207900-29208039)
chr4 (75-160)||(20225126-20225211)
chr4 (1-161)||(35567151-35567306)
chr4 (1-140)||(17043414-17043548)
chr4 (3-161)||(9832312-9832463)
chr4 (75-161)||(20908635-20908720)
chr4 (87-161)||(33836486-33836560)
chr4 (1-149)||(19027829-19027972)
chr4 (1-161)||(23580207-23580362)
chr4 (75-162)||(51865036-51865121)
chr4 (38-159)||(7909281-7909397)
chr4 (6-141)||(25463108-25463238)
chr4 (75-160)||(30690176-30690259)
chr4 (98-160)||(38755908-38755970)
chr4 (1-149)||(47441541-47441684)
chr4 (1-157)||(25343168-25343321)
chr4 (26-161)||(47443963-47444093)
chr4 (97-160)||(11394924-11394987)
chr4 (97-160)||(11404651-11404714)
chr4 (1-161)||(13256398-13256551)
chr4 (75-161)||(25629101-25629185)
chr4 (99-161)||(32484307-32484369)
chr4 (97-162)||(14983906-14983971)
chr4 (1-150)||(30496332-30496474)
chr4 (99-160)||(40553937-40553998)
chr4 (75-139)||(49796849-49796911)
chr4 (1-140)||(49938613-49938744)
chr4 (79-147)||(21489143-21489210)
chr4 (1-141)||(32478810-32478939)
chr4 (77-161)||(36816383-36816466)
chr4 (97-161)||(38786681-38786745)
chr4 (1-149)||(39077807-39077948)
chr4 (3-147)||(41018807-41018945)
chr4 (98-161)||(50555655-50555718)
chr4 (80-146)||(20405144-20405210)
chr4 (98-160)||(25388249-25388311)
chr4 (96-157)||(36589815-36589876)
chr4 (3-71)||(42164232-42164300)
chr4 (3-137)||(7385499-7385628)
chr4 (1-64)||(14590818-14590881)
chr4 (78-149)||(16494272-16494343)
chr4 (110-161)||(35532077-35532128)
chr4 (1-71)||(17315382-17315452)
chr4 (5-136)||(32629293-32629418)
chr4 (1-146)||(37494832-37494972)
chr4 (100-161)||(19027986-19028047)
chr4 (87-140)||(30581485-30581537)
chr4 (99-140)||(44718641-44718682)
chr4 (97-161)||(28494223-28494287)
chr4 (97-157)||(54967092-54967151)
chr4 (1-160)||(55766466-55766620)
chr4 (1-141)||(3580859-3580990)
chr4 (75-159)||(8473621-8473705)
chr4 (75-161)||(9987833-9987917)
chr4 (1-140)||(39029080-39029215)
chr4 (8-162)||(7038041-7038189)
chr4 (79-140)||(2813181-2813242)
chr4 (80-129)||(35894492-35894540)
chr4 (98-130)||(8820581-8820613)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-161)||(30560-30713)
[»] scaffold0049 (1 HSPs)
scaffold0049 (6-160)||(58963-59114)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-161)||(13023-13177)
[»] scaffold0057 (4 HSPs)
scaffold0057 (1-161)||(46812-46967)
scaffold0057 (1-146)||(24786-24921)
scaffold0057 (75-162)||(43709-43795)
scaffold0057 (96-140)||(46727-46771)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-147)||(10791-10932)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-130)||(10080-10202)
scaffold0187 (1-130)||(20408-20530)
[»] scaffold0015 (1 HSPs)
scaffold0015 (75-162)||(48632-48717)
[»] scaffold1176 (1 HSPs)
scaffold1176 (1-148)||(1599-1739)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-123)||(4138-4258)
[»] scaffold0180 (1 HSPs)
scaffold0180 (75-149)||(24144-24216)
[»] scaffold0223 (1 HSPs)
scaffold0223 (11-148)||(11122-11252)
[»] scaffold0018 (1 HSPs)
scaffold0018 (26-148)||(72879-72997)
[»] scaffold0954 (1 HSPs)
scaffold0954 (75-160)||(3596-3679)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-64)||(226497-226560)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-129)||(35048-35167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-67)||(43110-43176)
[»] scaffold0167 (1 HSPs)
scaffold0167 (97-141)||(23671-23715)


Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 39123871 - 39124161
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123871 agttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 39123970  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttaggcccatgtggtgttgtgtatttatgctcttgaagagt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123971 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccaagctgcccttttaggcccatgtggtgttgtgtatttatgctcttgaagagt 39124070  T
Q  201 taacagtatattatggcaatactcatagctggctggttttaagtccaaatataccgtgtctctttctccttattttgaatcacatagtacc 291  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39124071 taacagtatattatggcaatactcatggcaggctggttttaagtccaaatataccgtgtctctttctccttattttgaatcacatagtacc 39124161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40463858 - 40464013
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||| ||||||| ||||||||||||||||| |||||    |||||||||| |||||||||||  |    
T  40463858 agttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggta----aggctgcgtataatacaccaaa--t 40463951  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||| ||||||||||||||| ||||||||  |||||||||| ||||||||||    
T  40463952 ggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgccctttta 40464013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 47716440 - 47716596
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||| |||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  47716440 agttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 47716535  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||| | ||||||||    
T  47716536 tggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcccttt 47716596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42805505 - 42805662
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| |||||||||| ||    
T  42805505 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaataa 42805600  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  42805601 tggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 42805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 21172161 - 21172007
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |    
T  21172161 agttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 21172069  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  21172068 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 21172007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 42391251 - 42391099
Alignment:
Q  2 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 101  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||  ||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tg 42391159  T
Q  102 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  42391158 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 42391099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43557453 - 43557611
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| |||||||||| ||    
T  43557453 agttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaataa 43557548  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 161  Q
    |||||||||||| |||||||| ||||||||| |||||| ||| |||||||| | |||||||||    
T  43557549 tggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgccctttt 43557611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32758242 - 32758395
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||| ||| |||||||||||  |    
T  32758242 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgtgtacaatacaccaaa--t 32758334  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  32758335 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32758395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 10693225 - 10693073
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||| |||||||||||  |    
T  10693225 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaag-agggta----aggctgcgtacaatacaccaaa--t 10693133  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||| | | ||||||||    
T  10693132 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgcccttt 10693073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 2541174 - 2541030
Alignment:
Q  1 agttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    ||||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  ||||||||||     
T  2541174 agttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtactatacaccaaa- 2541080  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
     ||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  2541079 -tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccg 2541030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 33872063 - 33871922
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | | ||||| |||||||| |||||   |||||||||||||||||| |    ||||||||||| ||||||||  ||||    
T  33872063 agttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggat----aaggctgcgtacaatacacc--aaat 33871970  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||||||||||| ||||||| ||||| | ||||||| |||||||    
T  33871969 ggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcacc 33871922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 27889402 - 27889315
Alignment:
Q  72 gggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||    
T  27889402 gggaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctttt 27889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 22699124 - 22698978
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| |  | |||| |||||||| ||||  |||||||||||| ||||||||||    ||| ||||||| |||||||||||||    
T  22699124 agttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggt----aagactgcgtacaatacaccaaaaa 22699029  T
Q  100 tggtgggaccc-cttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||||||  ||||||||||||| ||||| ||||||| | ||||||||    
T  22699028 tggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccg 22698978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27629615 - 27629770
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||| |||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||| ||||||||||||||||||      
T  27629615 agttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggttgcgtaaaatacaccaaa-- 27629708  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||| |||||| |||| || |||||  |||||||| | |||||||||    
T  27629709 tggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgccctttt 27629770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42798650 - 42798805
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||||||| || ||||    |||||||||| |||||||||||      
T  42798650 agttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaaa-- 42798743  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||||| |||| ||||||| | ||||| || | |||||||||    
T  42798744 tggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgccctttt 42798805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 7879644 - 7879774
Alignment:
Q  26 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 124  Q
    ||||||| |||||||| |||||  ||||||||||||||| || ||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  7879644 cacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 7879737  T
Q  125 cgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| ||||||||  |||||||| | |||||||||    
T  7879738 cgtatgcgggagcttcagtgcaccgggttgccctttt 7879774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 19265796 - 19265949
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||| |||||||||| | ||||||| |||||| | || || | | |||||||||||| |||||    ||||||||||| ||||||||  ||||    
T  19265796 agttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggt----aaggctgcgtacaatacacc--aaat 19265889  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||| ||| | |||| ||||||||| |||||||| |||||||||||    
T  19265890 ggtgggaccccttcccgga-cctacatatgtgggagctttagtgcaccgggctgccctttt 19265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34626361 - 34626207
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||| ||||| | ||| | | |||||||| ||||| | ||| |||||||||||||||||    |||||||||  |||||||||||  |    
T  34626361 agttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggta----aggctgcgttcaatacaccaaa--t 34626268  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||| |||||||||||||||||||||| ||||||||| || || || | |||||||||    
T  34626267 ggtgggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttt 34626207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 48735275 - 48735122
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| | ||||   ||||||||||||| || ||||    |||||||||| |||||||||||      
T  48735275 agttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa-cacggta----aggctgcgtacaatacaccaaa-- 48735183  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  48735182 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 48735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 11617742 - 11617589
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    || ||||||| |||||||||||      
T  11617742 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaaa-- 11617649  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    |||||||||||||||| ||||||||||||||  ||| |||| |||||||| | |||||||    
T  11617648 tggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 18512581 - 18512466
Alignment:
Q  26 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 125  Q
    ||||||| |||||||| |||||    ||||||||||||| ||||||    |||||||||| |||||||| ||  ||||||||||||||||||||||||||    
T  18512581 cacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggta----aggctgcgtacaatacaccgaa--tggtgggaccccttcccggaccctgc 18512488  T
Q  126 gtatgagggagctttggtgcac 147  Q
    ||||| ||||||||||||||||    
T  18512487 gtatgcgggagctttggtgcac 18512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 46354175 - 46354293
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||| || || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  46354175 agttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 46354270  T
Q  100 tggtgggaccccttcccggaccc 122  Q
    |||||||||||||||||||||||    
T  46354271 tggtgggaccccttcccggaccc 46354293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 29907408 - 29907552
Alignment:
Q  9 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 108  Q
    |||||||||||||| | ||||||| |||||||||||||| | |||||||||||||| |  ||  | ||||||||||  |||||||||||| |||||||||    
T  29907408 tcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-atagt--gtaaggctgcgttcaatacaccaaaa-tggtgggac 29907503  T
Q  109 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||| |||||||||||  ||||| ||||||||| |||||||| | |||||||    
T  29907504 cccatcccggaccct--gtatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 28362299 - 28362164
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||| |||||| | ||| ||| |||||||||||||| | ||||||||||||||     | || ||||||||||| |||||||||||  |    
T  28362299 agttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaac---ttggtaaggctgcgtacaatacaccaaa--t 28362205  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    |||||||||||||||| |||| ||| |||| ||||||||||    
T  28362204 ggtgggaccccttcccagaccttgcatatgtgggagctttg 28362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 3469333 - 3469190
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa---cagggtagggaaggctgcgtaaaatacaccaaa 97  Q
    |||||||||||||||||||||| | ||| |   ||||||||||||||  |||||||||||||||   ||||||| ||     |||||| |||||||||||    
T  3469333 agttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggt----tgcgtacaatacaccaaa 3469238  T
Q  98 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgc 145  Q
    ||||| ||||||||||||  ||||||| ||||| ||||||||| ||||    
T  3469237 aatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgc 3469190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 18747472 - 18747621
Alignment:
Q  6 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggt 103  Q
    |||||| |||||||||| | ||||||  |||||| | ||||| | || |||||||||||  ||||||    ||||||||||| ||||||||  || ||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggt----aaggctgcgtataatacacc--aattggt 18747565  T
Q  104 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||| |||||||||    
T  18747566 gggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 35334968 - 35334827
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | |||| || |||||||| ||||| ||||| |||  ||||||||||||    || ||| ||| |||||||| ||  |    
T  35334968 agttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctcgtgta-aaaaacagggta----agactgtgtacaatacaccgaa--t 35334876  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  35334875 ggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccg 35334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 13805083 - 13805217
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| |  |||||| |||||||| ||||  | |||| |||||||| |||||   | ||||||| ||| |||||||||||  |    
T  13805083 agttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaa-caggg---gtaaggctgtgtacaatacaccaaa--t 13805176  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    ||||||||| ||||| |||||||||||||| ||||||||||    
T  13805177 ggtgggaccacttcctggaccctgcgtatgcgggagctttg 13805217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16341259 - 16341413
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||| ||||||   ||||| | ||||||| ||||| |||||||| | |||||||||||||| |||||||    ||||| |||| ||||||||||||     
T  16341259 agttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggta----aggctacgtacaatacaccaaaa- 16341353  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||| || |||||||||||   | |||| |||||||||||||||||| |||||||||    
T  16341354 tggtgggccctcttcccggacctatcatatgcgggagctttggtgcaccgggctgccctt 16341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 32233286 - 32233134
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    |||||||||  ||||||||| | || |||| |||||||| |||||   |||||||||||||||||||||    |||| ||||| | |||||||||  |||    
T  32233286 ttgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacagggta----aggcagcgtatattacaccaaa--tgg 32233193  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||  |||||||  ||||||| |||||||||||||  |||||||| |||||||||||    
T  32233192 tgggattccttcccaaaccctgcatatgagggagcttcagtgcaccgggctgccctttt 32233134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 45019012 - 45018935
Alignment:
Q  73 ggaaggctgcgtaaaatacaccaaaaa--tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    ||||||||||||| |||| ||||||||  |||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  45019012 ggaaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcacc 45018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 19427043 - 19426889
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||| |||| |||||    ||| ||||||| ||||||||  |||    
T  19427043 agttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggt----aagactgcgtacaatacacc--aaa 19426950  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| |||||| |||||||||| |||| | ||||||  |||||||| | |||||||||    
T  19426949 tggtggga-cccttctcggaccctgcatatgcgagagcttcagtgcaccgggttgccctttt 19426889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 38604558 - 38604641
Alignment:
Q  51 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||| |||||||| |||||||||||||||| |||||||||    
T  38604558 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgagacccctttccggaccctgcgtatgcgggagcttt 38604641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47078007 - 47077866
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||||| |||| || ||    || | |||||| |||||||  |||||    
T  47078007 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaatagagt----aaagttgcgtacaatacac--aaaat 47077915  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||  ||||| | |||| ||||||| | ||||||||    
T  47077914 ggtgggaccccttcccaaaccctacatatgcgggagctctagtgcaccg 47077866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28078285 - 28078152
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||||||||||| ||||| |||  |||||||||||    |||| ||| |  ||||||||  ||||    
T  28078285 agttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtgtaaaaaaacagggt----aaggttgcatgcaatacacc--aaat 28078192  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||||||||| | ||||| |||| | |||||||    
T  28078191 ggtgggaccccttcccgaatcctgcatatgcgagagcttt 28078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 13792213 - 13792149
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| ||||||||||| || ||||||||||||  |||||||| ||||||||||||||||||||    
T  13792213 aaatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagctgccctttt 13792149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 14732976 - 14732832
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || |||| |||||||| ||||| | |||   |||||||| |||||||    ||||||||| || |||||||||||    
T  14732976 agttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggta----aggctgcgtcaa-tacaccaaaaa 14732882  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||  || |||||||| ||||||  |||| ||||||||| ||||||||    
T  14732881 tggtgaaactccttcccgaaccctgtttatgcgggagctttagtgcaccg 14732832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 21566485 - 21566560
Alignment:
Q  73 ggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||| ||||||| |||||||||||| |||| ||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  21566485 ggaagactgcgtacaatacaccaaaa-tggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccg 21566560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 23419828 - 23419674
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||| |||||||||||| ||| | ||| ||| ||||| || ||||| | |||||||||||||| |||||||    || ||||||| |||||||||||      
T  23419828 agttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaaa-- 23419735  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||  |||| ||||| || ||| ||||| ||||| || ||||||||||    
T  23419734 tggtgggaccccttcctagaccttgcgtgtgcgggggctttagtgcatcgggctgcccttt 23419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 31591192 - 31591107
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||| ||| |||| ||||||| | |||||||| | ||||||||||    
T  31591192 aaggctgcgtacaataca--ataaatggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgccctttta 31591107  T

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Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 33500569 - 33500625
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 135  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  33500569 ctgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcggga 33500625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 19266431 - 19266564
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | |  |||| ||||||||  |||  | | |||| ||||||| |||||||    |||||||||| |||||||||||      
T  19266431 agttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggta----aggctgcgtacaatacaccaaa-- 19266524  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctt 139  Q
    | |||||| |||||||||||||||||||||| ||||||||    
T  19266525 ttgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 35787372 - 35787267
Alignment:
Q  51 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 150  Q
    |||||||||||||||| ||||    ||| |||||| |||||||||||  ||| |||||||||||||||||| |||||||| ||||||||   |||||||     
T  35787372 ctcttgtgtaaaaacatggta----aggttgcgtacaatacaccaaa--tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgg 35787279  T
Q  151 gctgccctttta 162  Q
    | ||||||||||    
T  35787278 gttgccctttta 35787267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 42476854 - 42476994
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||| ||| | ||||| | ||||| || ||||| ||||||||||||||| || ||||    |||||||||| |||||||||||  |    
T  42476854 agttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaa-caaggta----aggctgcgtacaatacaccaaa--t 42476946  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||||||||||  | | |||| |||| ||||||| | |||||||    
T  42476947 ggtgggaccccttcctaggctctgcatatgcgggagctctagtgcacc 42476994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 23231609 - 23231692
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | ||||||    
T  23231609 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttt 23231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42495989 - 42495919
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 71  Q
    |||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||| |||||||||||||    
T  42495989 agttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaacagggta 42495919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 38262340 - 38262207
Alignment:
Q  11 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaatggtgggacc 109  Q
    ||||||||| || | ||||||| |||||||| ||||| ||||||||||||||||     || || || | ||| || |||||||||||  || |||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaa----tatggtaatgttgcatacaatacaccaaa--tgatgggacc 38262247  T
Q  110 ccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||| || ||||||||| ||||||||| ||||||||    
T  38262246 ccttcccgaacactgcgtatgcgggagctttagtgcaccg 38262207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 11741776 - 11741927
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | || |||| ||||||||  |||| |  ||| ||||||||  ||||||    |||||||||| |||||||||||  |    
T  11741776 agttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaat-agggta----aggctgcgtacaatacaccaaa--t 11741868  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||| |||||||||||  ||||  ||| ||||||| | |||||||| | |||||||    
T  11741869 ggtgggatcccttcccggattctgcacatgcgggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 14099160 - 14099036
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || ||||  ||||||| ||||  | || ||||||||||| |||| ||    || ||||||| |||||||||||      
T  14099160 agttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggtta----agactgcgtacaatacaccaaa-- 14099067  T
Q  100 tggtgggaccccttcccggaccctgcgtatg 130  Q
    |||||||||||||||||| ||||| ||||||    
T  14099066 tggtgggaccccttcccgaaccctacgtatg 14099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 14409177 - 14409053
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || ||||  ||||||| ||||  | || ||||||||||| |||| ||    || ||||||| |||||||||||      
T  14409177 agttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggtta----agactgcgtacaatacaccaaa-- 14409084  T
Q  100 tggtgggaccccttcccggaccctgcgtatg 130  Q
    |||||||||||||||||| ||||| ||||||    
T  14409083 tggtgggaccccttcccgaaccctacgtatg 14409053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18327015 - 18327085
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 71  Q
    ||||||||||||||||||  || | ||||||| |||||||  ||||| | |||||||||||||||||||||    
T  18327015 agttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacagggta 18327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 35203445 - 35203556
Alignment:
Q  26 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 124  Q
    ||||||| |||||||| |||||  ||||||||||||||| |||| ||    || ||||||| |||| |||||||||||||||| ||||||| | || ||     
T  35203445 cacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggata----agactgcgtacaatataccaaaaatggtgggatcccttcctgaactcta 35203540  T
Q  125 cgtatgagggagcttt 140  Q
    |||||| |||||||||    
T  35203541 cgtatgcgggagcttt 35203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 1408529 - 1408562
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatg 130  Q
    ||||||||||||||||||||||||||||||||||    
T  1408529 aaatggtgggaccccttcccggaccctgcgtatg 1408562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7193066 - 7193127
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 62  Q
    |||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||    
T  7193066 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 25434112 - 25434157
Alignment:
Q  117 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||    
T  25434112 ggaccctgcgtatgcgggagctttagtgcaccgagctgtcctttta 25434157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 7644939 - 7645066
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 101  Q
    ||||||| | |||||||||| | ||||||| |||||||| ||||| | ||||||||| |||||||||||    |||   ||||| |||||||| |||||     
T  7644939 ttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aagatagcgtacaatacacc-aaaatt 7645033  T
Q  102 gtgggaccccttcccggaccctgcgtatgaggga 135  Q
    |||||||||||| || ||||||||||||| ||||    
T  7645034 gtgggacccctt-cctgaccctgcgtatgcggga 7645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 42495913 - 42495874
Alignment:
Q  109 cccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcacc 42495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5180311 - 5180202
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || |||| ||| | || ||||| | ||||||||| |||||||||||    ||| ||| ||| || ||||||||||    
T  5180311 agttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggt----aagactgtgtacaacacaccaaaaa 5180216  T
Q  100 tggtgggacccctt 113  Q
    || | |||||||||    
T  5180215 tgattggacccctt 5180202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 36602535 - 36602583
Alignment:
Q  113 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||| ||||||||||||| ||||||||| |||||||| | |||||||||    
T  36602535 tcccagaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 36602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 10543679 - 10543835
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||||| |||||||||||||| |||||||    |||||||||| |||||||||||||    
T  10543679 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaaaa 10543774  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  10543775 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 24200779 - 24200622
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||||    
T  24200779 agttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaaaa 24200684  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| |||||||||||||||| ||||| | ||||||| |||||||| | |||||||||    
T  24200683 tggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 14530299 - 14530455
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    ||||| |||| |||||||||| ||    
T  14530299 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctacgtacaatacaccaataa 14530394  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  14530395 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 14530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8455470 - 8455314
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| |||||||||||      
T  8455470 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggta----aggctgcgtacaatacaccaaa-- 8455377  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||| | ||||||||||    
T  8455376 tggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgccctttta 8455314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 5841009 - 5841169
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||||||||| | || |||||||||||     ||||| |||| |||||| |||||| ||| ||    
T  5841009 agttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaa----tagggtaaggatgcgtacaatacatcaataa 5841104  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttagg 164  Q
    ||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||||||    
T  5841105 tggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttttagg 5841169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9671161 - 9671317
Alignment:
Q  1 agttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| ||| | ||||||| ||| |||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||      
T  9671161 agttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa-- 9671253  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 163  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||    
T  9671254 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttag 9671317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12024072 - 12023950
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||||    
T  12024072 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aaat 12023979  T
Q  101 ggtgggaccccttcccggaccctgcgtat 129  Q
    ||||||||||| |||||||||||||||||    
T  12023978 ggtgggaccccctcccggaccctgcgtat 12023950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25249891 - 25249737
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||| |||||||||    ||||||||||| ||||||||  ||||    
T  25249891 agttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggt----aaggctgcgtacaatacacc--aaat 25249798  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||| ||||||||| |||||||||||| | ||||||| |||||||| | |||||||||    
T  25249797 ggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttt 25249737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 21779413 - 21779259
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| || || | ||||||||||||| |||||||    ||| |||||| |||||||||||  |    
T  21779413 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa--t 21779321  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  21779320 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 21779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 17896240 - 17896396
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||| |||| | ||||| | ||||||||||||||   |||||||||||||| |   ||||| ||||||||||| |||| ||||||      
T  17896240 agttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaa---tagggtaaggctgcgtacaatataccaaa-- 17896334  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||| |||| |||||||||    
T  17896335 tggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgccctttt 17896396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 14444720 - 14444864
Alignment:
Q  11 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 110  Q
    ||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    |||||| |||  ||||||||||  |||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggctgtgtacgatacaccaaa--tggtgggaccc 14444813  T
Q  111 cttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||| ||||||||| |||||||  | |||||||||    
T  14444814 cttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccctttt 14444864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 10546153 - 10546299
Alignment:
Q  11 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 108  Q
    |||||||||||| | ||||||| |||||||| |||||   ||||||| ||||||  |||||||    |||||||||| |||||||||||  |||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggac 10546246  T
Q  109 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  10546247 cccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10546299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 21377227 - 21377073
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| |  ||| || |||||| |||||||   |||||||||||||| |||||||    |||||| ||| ||| |||||||      
T  21377227 agttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggta----aggctgggtacaatgcaccaaa-- 21377134  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  21377133 tggtgggaccccttcccgaaccctgcgtatgtgggagcttt-gtgcaccgagctgccctttt 21377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 7214515 - 7214659
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || |||| |||||| | ||||| ||||||||||||||| |||||||    ||||||||||| ||||||| |||||    
T  7214515 agttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggt----aaggctgcgtacaatacacaaaaaa 7214610  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    ||||| || |||||| ||||| ||||||||| | ||| ||| |||||||    
T  7214611 tggtgagatcccttctcggacactgcgtatgcgagagttttagtgcacc 7214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 17667983 - 17668138
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||    |||||||||||||| |||||||    |||||||||| |||||||||||      
T  17667983 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggta----aggctgcgtacaatacaccaaa-- 17668076  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| |||||||| || |||||||||||  ||||||||| |||||||| | |||||||||    
T  17668077 tggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgccctttt 17668138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 25079872 - 25079717
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||| |||||||   |||||||||||||| |    ||| |||| |||||| |||||||| ||  |    
T  25079872 agttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaaca--aggtaaggatgcgtacaatacaccgaa--t 25079777  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||| | ||||||||    
T  25079776 ggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 36871509 - 36871627
Alignment:
Q  36 agtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 135  Q
    |||||| ||||| | ||||||||| |||||||||||    |||||||||| |||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccgga-cctgcgtatgcggga 36871601  T
Q  136 gctttggtgcaccgagctgccctttt 161  Q
    ||||| |||||||| | |||||||||    
T  36871602 gctttagtgcaccgggttgccctttt 36871627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 23397747 - 23397899
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||  ||||||    ||||| |||| |||||||||||  |    
T  23397747 agttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctacgtacaatacaccaaa--t 23397839  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||||||||| |||||||| | |||| ||||||| | |||||||| | ||||||||    
T  23397840 ggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggttgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 11514417 - 11514572
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| ||| |||| ||||| | |||||||||||||| ||  |||    |||||||||| |||||||||||      
T  11514417 agttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagta----aggctgcgtacaatacaccaaa-- 11514510  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| ||||| ||||||||||||| ||||||||| ||||||||   ||||||||||    
T  11514511 tggtgggaccc-ttcccagaccctgcgtatgcgggagctttagtgcaccggattgccctttta 11514572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 14544044 - 14544201
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    |||||||||||||||||||||| |  || |||||| || || ||||| | ||||||||||  |||||||||||    || ||||||  ||||  | ||||    
T  14544044 agttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggta----agactgcgtgcaataaccaaaaa 14544139  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||| ||||||||||| |||||||||||||| ||||||||| ||||||| || ||||||||    
T  14544140 atggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaagttgcccttt 14544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 17623545 - 17623700
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||| ||||| || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| |||||||||||      
T  17623545 agttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggta----aggctgcgtacaatacaccaaa-- 17623638  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| ||||||||||| | |||||||||| || |||||| |||||| | | |||||||||    
T  17623639 tggtggaaccccttcccgaatcctgcgtatgtggaagctttagtgcactgggttgccctttt 17623700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 22371038 - 22371158
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||  | | ||||||| |||||||| ||||| | |||  ||||||||||||||||    |||||||||| |||||||||||  |    
T  22371038 agttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc--gtgtaaaaacagggta----aggctgcgtacaatacaccaaa--t 22371129  T
Q  101 ggtgggaccccttcccggaccctgcgtat 129  Q
    |||||||||||||||||||||||| ||||    
T  22371130 ggtgggaccccttcccggaccctgtgtat 22371158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 23488545 - 23488620
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||||||| | ||| ||||||    
T  23488545 aatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgctctttta 23488620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 4516505 - 4516354
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | |||   | ||||| |||||||| | |||||||||||||| ||||| |    | |||||||| ||||||||||       
T  4516505 agttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggca----acgctgcgtacaatacaccaat-- 4516412  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    ||||||||||||||||||||||||||||||| || |||||| ||| |||| |||||||    
T  4516411 tggtgggaccccttcccggaccctgcgtatgtggaagctttagtgtaccgggctgccc 4516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 44643595 - 44643660
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||||||    
T  44643595 aaatggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctttta 44643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 99417 - 99285
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||| |||||||||| | ||||||| |||||||||||||| | |||||||  |||||||     || ||||||||||| ||||||||  ||||    
T  99417 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt-aaaaaaca----tggcaaggctgcgtacaatacacc--aaat 99325  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||| |||||||| | ||||||| ||||| |||||||||    
T  99324 ggtggaaccccttctcagaccctgtgtatgcgggagcttt 99285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 31158595 - 31158459
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || ||||  ||||| |  |||| | |||||| ||||||| |||||||    ||  ||| || |||| ||||||||    
T  31158595 agttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggta----agattgcatacaataaaccaaaaa 31158500  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  31158499 tggtgggaccccttcccagaccctgcgtatgcgggagcttt 31158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 40762317 - 40762234
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||| |||| |||||||||||  ||||||||||| |||| |||||||||||||| ||||||||| |||||||| | ||||||||    
T  40762317 aaggctacgtacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 25641487 - 25641625
Alignment:
Q  5 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 104  Q
    |||||||||||||||||| | ||||||| |||||||| ||||| |  | |||||| ||||||||||    || | |||||| ||||||||  |||| |||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggt----aaagttgcgtacaatacacc--aaattgtg 25641580  T
Q  105 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||| | |||||||||| | ||||||| ||| ||||    
T  25641581 ggaccccttcccgaatcctgcgtatgcgagagctttagtgaaccg 25641625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 40579810 - 40579750
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 17380390 - 17380238
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||| |||| | ||||||| |||||| | |||||   |||||||||| |||||||||    |||| || ||  ||||||||  ||||    
T  17380390 agttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggt----aaggttgtgtgcaatacacc--aaat 17380297  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    | ||| ||||||||| |||||||||| ||| ||||||||| |||||||| ||| ||||||    
T  17380296 gatggaaccccttcctggaccctgcggatgcgggagcttt-gtgcaccgggcttcccttt 17380238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 19614981 - 19615116
Alignment:
Q  9 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 107  Q
    |||||||||||||| | ||||||| |||||||| |||||   ||||||| |||||| |||||||    || ||||||| |||| ||||| ||| |||| |    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggta----agactgcgtacaatataccaataatagtgg-a 19615075  T
Q  108 ccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||||| ||||||||||||  |||||||| |||||||    
T  19615076 ccccttcccgaaccctgcgtatgcaggagctttagtgcacc 19615116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 24860138 - 24859999
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    ||||||||||||||||| || |  ||||||  ||| ||| |||||   |||| ||||||||||| |||     |||||||||| ||||||||  ||||||    
T  24860138 ttgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggt-----aggctgcgtacaatacacc--aaatgg 24860046  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    | | |||||||| ||||||||||||||| ||||||||| ||||||||    
T  24860045 tagaaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 24859999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 15296490 - 15296405
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||| ||||||| | |||||| |||||| ||||||||||||||| || ||||||||||| ||  |||||||||||    
T  15296490 aaggctgcgtacaatataccaaaa-tagtgggatcccttctcggaccctgcgtatgtggaagctttggtgcgccaggctgccctttt 15296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29420043 - 29419945
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    |||||||||||  ||||||||| | |||| || |||||||| |||||   |||||||||||||| ||||||| | ||||||||||| ||||||||||||    
T  29420043 agttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacaccaaaa 29419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 34080176 - 34080238
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||||||||| |||| ||||| ||| |||||||| | ||||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttta 34080238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 34766330 - 34766376
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 5450266 - 5450384
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    |||||||||||||||||||||| | ||||||| ||| |||| |||||   ||||||||||||||  || ||||    |||||||||| ||||||||  ||    
T  5450266 agttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggta----aggctgcgtacaatacacc--aa 5450359  T
Q  99 atggtgggaccccttcccggaccct 123  Q
    | ||||||||||||||| |||||||    
T  5450360 agggtgggaccccttcctggaccct 5450384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 24890463 - 24890533
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 147  Q
    |||||||| || ||||||||||   |||||||||||||||||||||||||||||||  |||||||| ||||||    
T  24890463 aaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 44449467 - 44449407
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 136  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||||| || |||||    
T  44449467 aaggctgcgtacaatacaccaaaa-tagtgggaccccttcccggaccctgcgtttgtgggag 44449407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 19185823 - 19185763
Alignment:
Q  80 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||| ||| ||| ||||||||||| ||||||||| |||||||||||||| |||||||||    
T  19185823 tgcgtacaatgcacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagcttt 19185763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 19977868 - 19977726
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||| |||| | ||||||| ||||| || ||||| | ||||| ||||||||     ||||  |||| |||||| |||||||||||      
T  19977868 agttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaa----taggataaggttgcgtacaatacaccaaa-- 19977775  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||| ||||||||| ||| || ||||| ||||||||| |||||||    
T  19977774 tggtgggatcccttcccgaaccttgtgtatgcgggagctttagtgcacc 19977726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27573602 - 27573756
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||  ||| |||||||  | ||| | |||||||||| ||||| |||    ||||||||||| ||||||||  ||||    
T  27573602 agttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggt----aaggctgcgtacaatacacc--aaat 27573695  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||| |||  |||||  |||||| ||||| ||||||||| ||||| || | |||||||||    
T  27573696 ggtggaaccatttcccaaaccctgtgtatgtgggagctttagtgcatcgggttgccctttt 27573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 39914460 - 39914304
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    ||||||||||||||||||| || | ||||||  ||||| || |||||   ||||||||||||||  ||||||| |||    || ||| |||||||| ||     
T  39914460 agttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaagga----tgtgtacaatacaccgaa- 39914366  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
     |||||||||||||||| | |||||||||||| ||||||||| ||||| || | ||||||||||    
T  39914365 -tggtgggaccccttcctg-accctgcgtatgcgggagctttagtgcatcgggttgccctttta 39914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 45235972 - 45235820
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||| ||||||||||||||   |||| || |||||||||||||| ||||||| |||||||  |   ||||| |||||| |||  |||||||  ||||    
T  45235972 agttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataa---tagggtaaggctacgtgtaatacac--aaaa 45235878  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    |||||||||||||| || |||||| ||||||  |||||||| ||| ||| || |||||    
T  45235877 tggtgggaccccttaccagaccctacgtatgcaggagctttagtgtaccaagttgccc 45235820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 8575975 - 8576018
Alignment:
Q  105 ggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcacc 8576018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 32781367 - 32781307
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    ||||||| |||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||||    
T  32781367 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcgggagctttg 32781307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 33795266 - 33795401
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta-aaatacaccaaaa 98  Q
    ||||||||||| |||| ||||| | ||||||| |||||||  |||||   |||||| ||||||| |||||||    |||||||||| ||||||||| |      
T  33795266 agttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggta----aggctgcgtacaaatacaccta-- 33795359  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
     ||||||||||||||||| ||||||| ||||| ||||||||||    
T  33795360 -tggtgggaccccttcccagaccctgtgtatgcgggagctttg 33795401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 41409936 - 41409995
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    ||||||||||||||||||||||||||| |||| ||||||||  |||||||| | ||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 3633762 - 3633708
Alignment:
Q  106 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  3633762 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 3633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 22371199 - 22371249
Alignment:
Q  112 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 22371249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 25632561 - 25632644
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||||||  ||||||||  |||||||| ||| | |||||| ||||||||| |||||||| | ||||||||    
T  25632561 aaggctgcgtacaatacaccaaa--tggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgcccttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44604835 - 44604905
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 71  Q
    ||||||||||||||||||| || | ||| ||| |||||||| |||||   |||||||||||||||||||||    
T  44604835 agttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggta 44604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 24059057 - 24059016
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  24059057 atggtgggacccctttccggaccctgcgtatgtgggagcttt 24059016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 26684683 - 26684631
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||  |||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccg 26684631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 124962 - 124925
Alignment:
Q  112 ttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccg 124925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17705476 - 17705537
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 62  Q
    ||||||||||||||||||  || | ||||||| |||||||| ||||| | ||||||||||||    
T  17705476 agttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaa 17705537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 760066 - 760114
Alignment:
Q  113 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||| |||||||||||| |||||||||||||||||  |||| ||||||    
T  760066 tcccgaaccctgcgtatgtgggagctttggtgcaccaggctgtcctttt 760114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 23053012 - 23052964
Alignment:
Q  113 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||| |||||||||||||  |||||||| |||||||| |||||||||||    
T  23053012 tcccagaccctgcgtatgcaggagcttttgtgcaccgggctgccctttt 23052964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13628946 - 13628788
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| |||||||||| ||    
T  13628946 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaataa 13628851  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  13628850 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 13628788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29366876 - 29366717
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||| ||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| |||||||||| ||    
T  29366876 agttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaataa 29366781  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 163  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| | | |||||||||||    
T  29366780 tggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgcccttttag 29366717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 26869710 - 26869864
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||| ||||||||||||||||    |||||||||| |||||||||||  |    
T  26869710 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggta----aggctgcgtacaatacaccaaa--t 26869803  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||||| | |||||||||    
T  26869804 ggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttt 26869864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46421191 - 46421055
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  46421191 agttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 46421096  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  46421095 tggtgggaccccttcccggaccctgcgtatgcgggagcttt 46421055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13730758 - 13730601
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| |||||||||| ||    
T  13730758 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaataa 13730663  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  13730662 tggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 13730601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 8247843 - 8247707
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||| |||||| |||||||||| ||    
T  8247843 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaataa 8247748  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  8247747 tggtgggactccttcccggaccctgcgtatgcgggagcttt 8247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 40272966 - 40272811
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | || |||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| |||||||||||      
T  40272966 agttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa-- 40272873  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  40272872 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 40272811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34420798 - 34420642
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  |||||||||||     
T  34420798 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtaccatacaccaaaa- 34420704  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||||   |||||||||||    
T  34420703 tggtgggaccccttcccggaccttgcgtatgtgggagctttagtgcacatggctgccctttt 34420642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 5173874 - 5173718
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||||  |||    ||| ||| |  ||||||||||||||    
T  5173874 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagta----aggttgcatgcaatacaccaaaaat 5173779  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| |||||||||||||| |||||||| ||||||||| |||||||| | |||||||||    
T  5173778 ggtggggccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgccctttt 5173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 22609769 - 22609921
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || |  |||||| |||||| | ||||| | |||||||||||||||||||||    |||||||||| |||||||||||  |    
T  22609769 agttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--t 22609862  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  22609863 ggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16735444 - 16735599
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| |||| ||||||| |||||||| ||||| | |||||||  |||||||||||    ||||||||||| ||||||||  ||||    
T  16735444 agttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggt----aaggctgcgtacaatacacc--aaat 16735537  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||| ||||||||| || |||||  |||||| | | ||||||||||    
T  16735538 ggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttta 16735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 516417 - 516570
Alignment:
Q  6 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa-tggt 103  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||| | |||| |||||||| |||     
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgcacaataaaccaaaaaatggc 516512  T
Q  104 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||||| | |||||||||    
T  516513 gggaccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 22123067 - 22122918
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    |||||||||||||||||||| | | ||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  ||||||    
T  22123067 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aaatgg 22122975  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||| | |||||||    
T  22122974 tgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 39203519 - 39203671
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||| |||||| |||||||||||  |    
T  39203519 agttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa--t 39203611  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||| ||| |||| ||||||||| |||||||| | ||||||||    
T  39203612 ggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcccttt 39203671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 10795554 - 10795435
Alignment:
Q  26 cacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 124  Q
    ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggta----aggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctg 10795459  T
Q  125 cgtatgagggagctttggtgcacc 148  Q
    |||||| ||||||||  |||||||    
T  10795458 cgtatgcgggagcttcagtgcacc 10795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 1217093 - 1217246
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||| ||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |    
T  1217093 agttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 1217185  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    || |||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  1217186 ggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1217246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26573130 - 26573282
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| |||||||||| |||||||    |||||||||| ||||||||||       
T  26573130 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggta----aggctgcgtacaatacaccaat-- 26573223  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    |||||||||||| |||||||||||||||||| | ||||||| |||||||  ||||||||    
T  26573224 tggtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggctgccct 26573282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 53996718 - 53996564
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatg 101  Q
    |||||||||| ||||||||| | |||| || |||||| | |||||   |||||||||||||| |||||||    ||||||| || |||||||||||| ||    
T  53996718 ttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggta----aggctgcttacaatacaccaaaa-tg 53996624  T
Q  102 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||||    
T  53996623 gtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgccctttt 53996564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 45786299 - 45786214
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||| | ||||||||    
T  45786299 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgcccttt 45786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 54484765 - 54484849
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  54484765 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 54484849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25944472 - 25944628
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||| |||||||||| | || |||| |||||||| ||||| | |||| |||||||||   ||   | ||||||| ||| |||||||||||| |    
T  25944472 agttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgg---gcaaggctgagtacaatacaccaaaa-t 25944567  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||| ||||||||||||| ||||||||| | |||||  |||||||||||    
T  25944568 ggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcaccaggctgccctttt 25944628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6411975 - 6411832
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||| ||||| | | || |||| |||||| |  |||| | |||||||||||||||||||||    |||||||||| |||||||||||  |    
T  6411975 agttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--t 6411882  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 150  Q
    | |||||||||||||| |||| |||||||| ||||||||| |||||||||    
T  6411881 gatgggaccccttcccagaccttgcgtatgcgggagctttagtgcaccga 6411832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 353434 - 353351
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||    
T  353434 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9607206 - 9607342
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||  ||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| |||||||||| ||    
T  9607206 agttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtagaatacaccaataa 9607301  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    || |||||||||||||| ||||| || |||| |||||||||    
T  9607302 tgttgggaccccttcccagaccccgcatatgcgggagcttt 9607342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 14986993 - 14987105
Alignment:
Q  34 caagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 132  Q
    |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||| |||||||||| ||| |||| |    
T  14986993 caagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcg 14987088  T
Q  133 ggagctttggtgcaccg 149  Q
    |||||||| ||||||||    
T  14987089 ggagctttagtgcaccg 14987105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 34771447 - 34771363
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| |||||||||||    
T  34771447 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgccctttt 34771363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 45139624 - 45139479
Alignment:
Q  9 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 107  Q
    |||||||||||||| | ||||||| |||||  | |||||   ||||||||||||| ||||||||    ||||||| || |||||||||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggta----aggctgcatacaatacaccaaaaatggtggga 45139529  T
Q  108 ccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||| || |||||||||| |||| |||| |||||||| |||||||||    
T  45139528 ccccttcccaga-cctgcgtatgcgggaacttt-gtgcaccgggctgccctt 45139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 49013558 - 49013472
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || || | ||||||||| |||||||| | |||||||||    
T  49013558 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgccctttt 49013472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 30928301 - 30928166
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||| ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| || ||||||||||||||       
T  30928301 agttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgtgtaaaatacaccaat-- 30928208  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    ||| |||||||||||||||||||||| |||| ||||||||||    
T  30928207 tggcgggaccccttcccggaccctgcatatgtgggagctttg 30928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 31592878 - 31593004
Alignment:
Q  27 acgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcg 126  Q
    |||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||| ||||||||||||||||     
T  31592878 acgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggactccttcccggaccctgca 31592970  T
Q  127 tatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||| ||||||| | |||||||| | ||||||||    
T  31592971 tatgcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 52926364 - 52926218
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||            | ||||||||||| |||||||||||  |    
T  52926364 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta------------gtaaggctgcgtacaatacaccaaa--t 52926279  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| ||||||||||||||||||||| ||||||||| | |||||| | |||||||||    
T  52926278 ggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttt 52926218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10870105 - 10870021
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaat 89  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    |||||||||||||||    
T  10870105 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtaaaat 10870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 15797294 - 15797378
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  15797294 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgccctttt 15797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 25517251 - 25517167
Alignment:
Q  77 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 163  Q
    ||||||||| |||||||  |||||||||||||||||||||||| ||||||||||  |||||||| |||||||| | |||||||||||    
T  25517251 ggctgcgtacaatacac--aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgcccttttag 25517167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 33926094 - 33926220
Alignment:
Q  9 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 108  Q
    |||||||||||||| | || |||| |||||||| ||||  | ||||||||||||||||||||    ||||||| ||| |||||||| | |||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggt----aaggctgtgtacaatacacc-ataatggtgggac 33926188  T
Q  109 cccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||| ||||||||| |||| | |||||||    
T  33926189 cccttcctggaccctgcatatgcgagagcttt 33926220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 7697039 - 7696903
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||| ||| | ||||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  ||||    
T  7697039 agttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aaat 7696947  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||     ||||||||||||| |||| |||| ||||||| | ||||||||    
T  7696946 gg-----ccccttcccggacactgcatatgtgggagctctagtgcaccg 7696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12914189 - 12914032
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||| ||||||| |||| | |||  || |||||||| ||||| | |||||||||||||| |||||||    |||| ||||| |||||||||||      
T  12914189 agttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcggcgtacaatacaccaaa-- 12914096  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 163  Q
    ||||| ||||||||||| |||||||| |||| ||||||||   ||||||| | |||||||||||    
T  12914095 tggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgcccttttag 12914032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 47624095 - 47624167
Alignment:
Q  51 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 129  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||||||||||||||||||||||| ||||    
T  47624095 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgtgtat 47624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 54374429 - 54374344
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||| ||||||||| || ||||  |||||| ||||    
T  54374429 aaggctgcgtacaatccaccaaaa-tggtgggaccccttcccggaccctgcatatgcgggagctttagttcaccaggctgccatttt 54374344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 829521 - 829453
Alignment:
Q  80 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||||||||    
T  829521 tgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccg 829453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 24851364 - 24851300
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||| | |||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttt 24851300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 45948921 - 45948849
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||| || ||||||||||   ||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  45948921 aaggctgcatacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 45948849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 30452892 - 30452954
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 30452954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 10484671 - 10484614
Alignment:
Q  105 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||| | ||||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10484614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 44403619 - 44403554
Alignment:
Q  96 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||||||| ||||||  | |||||| |||||||| |||||| ||||    
T  44403619 aaaatggtgggaccccttcccggaccctacgtatgctgaagctttagtgcaccgggctgccttttt 44403554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 55401254 - 55401330
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 156  Q
    ||||||| |||||||||||| ||||||||||||||| |||||| | |||||| |||||||||  ||||||| ||||||    
T  55401254 ctgcgtataatacaccaaaa-tggtgggaccccttctcggaccttccgtatgcgggagcttttttgcaccgggctgcc 55401330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 7942993 - 7943134
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||| | |||||||| ||||| |  |||||| |||||| |||||||    || ||||||| |||||| ||||      
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggta----agactgcgtacaatacatcaaa-- 7943086  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 147  Q
    |||||||| ||||| || |||| |||||||| ||||||||| ||||||    
T  7943087 tggtgggatccctttccagaccatgcgtatgcgggagctttagtgcac 7943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 12525414 - 12525543
Alignment:
Q  5 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggt 103  Q
    |||||||| ||||||||| | ||| ||| | |||||| ||||| | |||||||||||||| |||||||    ||||||||  || |||||||||||||||    
T  12525414 gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggta----aggctgcg--aagtacaccaaaaatggt 12525507  T
Q  104 gggaccccttcccggaccctgcgtatgagggagctt 139  Q
    ||||| ||||||  ||||||| ||||  ||||||||    
T  12525508 gggacaccttcctagaccctgtgtatacgggagctt 12525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 40968611 - 40968677
Alignment:
Q  96 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||| ||||||||||  |||||| | |||| ||||||||| ||||| |||||||||||||||    
T  40968611 aaaatggtgagaccccttcctagaccctacatatgcgggagctttagtgcatcgagctgccctttta 40968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45620983 - 45620890
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgtaaaatacaccaa 96  Q
    ||||||||||| |||||||||| | ||||||| ||||| || ||||| | ||||||||||  ||||||||||    ||||||||||| ||||||||||    
T  45620983 agttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggt----aaggctgcgtacaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 47624208 - 47624257
Alignment:
Q  112 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 47624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 50625013 - 50624952
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||| |||||| || ||||||||| | ||||||||| |||||||| |||||||||||    
T  50625013 tggtgggacgccttcctgggccctgcgtaagtgggagctttagtgcaccgggctgccctttt 50624952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 45416986 - 45416932
Alignment:
Q  107 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||  | |||||| |||||||| ||||||||||||    
T  45416986 accccttcccggaccctgcgtatgcagaagcttt-gtgcaccgggctgccctttta 45416932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53062041 - 53062112
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggta 71  Q
    |||||||||||||||||||||| | |||| || |||||||| ||||| | ||| ||||| ||||||||||||    
T  53062041 agttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4495818 - 4495714
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| ||||||||  |||  | || |||||| |||||||||||    ||||||||||| ||||||||  |||    
T  4495818 agttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggt----aaggctgcgtacaatacacc--aaa 4495725  T
Q  100 tggtgggaccc 110  Q
    |||||||||||    
T  4495724 tggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 9276338 - 9276400
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||| |||||||||||  |||||| |||| ||||||||||||||||||| |||| ||||    
T  9276338 aaggctgcgtacaatacaccaaa--tggtgg-accctttcccggaccctgcgtatgcgggaacttt 9276400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 46170030 - 46169988
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctt 139  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  46170030 aaatggtaggaccccttcccggaccctgcatatgtgggagctt 46169988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 54032614 - 54032568
Alignment:
Q  117 ggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 163  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||||    
T  54032614 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttag 54032568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 4495719 - 4495675
Alignment:
Q  117 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||    
T  4495719 ggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 4495675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 35417998 - 35418058
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    |||||||||||||||||||||||||| ||  ||| | ||||||| ||||| || |||||||    
T  35417998 aaatggtgggaccccttcccggaccccgcaaatgcgagagctttagtgcatcgggctgccc 35418058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 43956515 - 43956471
Alignment:
Q  117 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| ||||||| ||||||||| |||||||| |||||||||||    
T  43956515 ggacccagcgtatgcgggagctttagtgcaccgggctgccctttt 43956471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 29356009 - 29355854
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaaaatg 101  Q
    |||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| |||||||||| ||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaataatg 29355914  T
Q  102 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  29355913 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 29355854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12222071 - 12221913
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  12222071 agttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 12221976  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||    
T  12221975 tggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 9161104 - 9161260
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||| |||    |||||||||| |||||| ||| |||    
T  9161104 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagta----aggctgcgtacaatacatcaataat 9161199  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||| ||||||||||||||| || |||||| |||||||  | |||||||||    
T  9161200 ggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccctttt 9161260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 1354909 - 1354755
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |    
T  1354909 agttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 1354817  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  1354816 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 1354755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 1346945 - 1347098
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | | ||||||||||| |||||||    |||||||||| |||||||||||  |    
T  1346945 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 1347037  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  1347038 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1347098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2166566 - 2166409
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| |||||||||| ||    
T  2166566 agttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaataa 2166471  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||   |||  ||||||||| |||||||| | |||||||||    
T  2166470 tggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2166409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2178199 - 2178042
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| |||||||||| ||    
T  2178199 agttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaataa 2178104  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||   |||  ||||||||| |||||||| | |||||||||    
T  2178103 tggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2178042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 12885967 - 12886050
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| | ||||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctttta 12886050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 12892064 - 12892145
Alignment:
Q  80 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  12892064 tgcgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 12892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 7947455 - 7947371
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| ||||||   ||||||||||    
T  7947455 aaggctgcgtacaatacaccaaaa-tggtgggcccccttcccggaccttgcgtatgtgggagctttagtgcacttggctgcccttt 7947371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 6808468 - 6808531
Alignment:
Q  98 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttt 6808531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 23930188 - 23930125
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||||    
T  23930188 atggtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttta 23930125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 3116202 - 3116140
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||||||| || |||||    
T  3116202 aatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccg 3116140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3815231 - 3815088
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta-gggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | || |||||||||||     || || | | ||||||| ||||||||  |||    
T  3815231 agttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaa----atatggtacgactgcgtacaatacacc--aaa 3815138  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||| |||||| ||||| |||||| || |||||| ||||||||    
T  3815137 tggtgggaccctttcccgaaccctacgtatgcggaagctttagtgcaccg 3815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 13905133 - 13904984
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||  ||||||||  |||||  |||||||||| ||||||||||    |||||||| || ||| ||||  |||    
T  13905133 agttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggt----aaggctgcatacaattcacc--aaa 13905040  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    |||| |||||| |||||| ||||||||||| | |||||||| |||||||| |||||||    
T  13905039 tggt-ggaccctttcccgaaccctgcgtatcacggagcttt-gtgcaccgggctgccc 13904984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 10734965 - 10734905
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || ||||| ||||||||||    
T  10734965 tggtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttt 10734905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 13267797 - 13267861
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |||||||| | |||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgccctttt 13267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 17432332 - 17432483
Alignment:
Q  12 tgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggta--gggaaggctgcgtaaaatacaccaaaaatggtgggac 108  Q
    ||||||||||| | ||| ||| |||||||| |||||    |||||||| ||||||||||||  || ||||||| ||| ||||||| |||||||||| |||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagggtaaggctgtgtacaatacactaaaaatggtgagac 17432431  T
Q  109 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |  |||||||| |||| | ||| ||||||||| |||||||| | ||||||||    
T  17432432 cttttcccggatcctgtgcatgcgggagctttagtgcaccgggttgcccttt 17432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 26097210 - 26097294
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||  ||  |||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  26097210 aaggctgcgtacaatacaccaaa--tgaagggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 26097294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6024214 - 6024332
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||| || || | ||||| | ||| |||||||||| | |||||||||||||| || ||||    || ||||||| |||||||||| ||    
T  6024214 agttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggta----agactgcgtacaatacaccaataa 6024309  T
Q  100 tggtgggaccccttcccggaccc 122  Q
    || ||||||| ||||||||||||    
T  6024310 tgatgggacctcttcccggaccc 6024332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 11395836 - 11395895
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||||||||||||||| |||||||||| ||||||||| || ||||| ||||||||||    
T  11395836 tggtgggaccccttcccggatcctgcgtatgcgggagctttagtccaccg-gctgcccttt 11395895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 24097649 - 24097692
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagcttt 24097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 24734694 - 24734749
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 130  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||| ||||||||||    
T  24734694 aaggttgcgtacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatg 24734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 25557775 - 25557859
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||  ||  || ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  25557775 aaggctgcgtacaatacaccaaa--tgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 25557859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 14975163 - 14975101
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||||| |||||||||||||||||||| |||| || |||| ||||| ||| ||||||||    
T  14975163 aatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagttttagtgcaccg 14975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 14553493 - 14553626
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||| ||| | ||| ||| |||||||| ||||  |  |||||||||||||     ||||| ||||||| ||| ||||||||||||     
T  14553493 agttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaa----tagggtaaggctgtgtataatacaccaaaac 14553587  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagct 138  Q
    |||||||||||||||   ||||||| ||||| |||||||    
T  14553588 tggtgggaccccttcgtagaccctgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 15866102 - 15866041
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    ||||||||||||||||||||||||||||||| || |||| || | |||||| ||| ||||||    
T  15866102 aaatggtgggaccccttcccggaccctgcgtttgcgggatctatagtgcactgagttgccct 15866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8409224 - 8409287
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 64  Q
    ||||||||| |||||||||||| | ||||| | |||||||| ||||| | ||||||||||||||    
T  8409224 agttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaa 8409287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14975234 - 14975171
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 64  Q
    ||||||||||||||||||| || | ||||| | |||||||| ||||| | ||||||||||||||    
T  14975234 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaa 14975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 32579497 - 32579540
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||||||||||||| |||||||| |||| |||||||||    
T  32579497 aaatggtgggaccccttcccagaccctgcatatgcgggagcttt 32579540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 2755507 - 2755466
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 116  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  2755507 aaggctgcgtacaatacaccaaaaatggtgggagtccttccc 2755466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 383837 - 383760
Alignment:
Q  81 gcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||| |||||||||||  | ||||||||||||| | ||||||||||||| ||||||||  || ||||| | ||||||||    
T  383837 gcgtacaatacaccaaa--ttgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttt 383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38879562 - 38879720
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| |||||||||| ||    
T  38879562 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaataa 38879657  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  38879658 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 38879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43334183 - 43334340
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||| ||||||||||  |||||||    |||||||||| ||||||||||||    
T  43334183 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggta----aggctgcgtacaatacaccaaaa 43334278  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||    
T  43334279 atggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgccctttt 43334340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 27328733 - 27328869
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  27328733 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 27328828  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  27328829 tggtgggaccccttcccgaaccctgcgtatgcgggagcttt 27328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 41014300 - 41014455
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||||    
T  41014300 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aaat 41014393  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||| |||||| || |||| ||||||||| |||||||| | ||||||||||    
T  41014394 ggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggttgccctttta 41014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4619260 - 4619102
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||  | |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  4619260 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 4619165  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||| || |||| | ||||||| |||||||| | ||||||||||    
T  4619164 tggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgccctttta 4619102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 32703411 - 32703560
Alignment:
Q  7 tgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtggg 106  Q
    |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtggg 32703503  T
Q  107 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 163  Q
    ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||||    
T  32703504 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttag 32703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24448871 - 24449026
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | || |||||||||||     ||||| ||||||||||| |||||||||||      
T  24448871 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaa----tagggtaaggctgcgtacaatacaccaaa-- 24448964  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||    
T  24448965 tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 24449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 8170136 - 8169983
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||| |||| | ||||||| |||||||| ||||| | || |||||||||| |||||||    |||||||||| |||||||||||  |    
T  8170136 agttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 8170044  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||| |||| ||||| ||  |||||||| | |||||||||    
T  8170043 ggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgccctttt 8169983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 19143094 - 19142942
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    ||||||||| |||||| ||| | ||| ||| |||||||| |||||   |||||||||||||||||||||    |||||||||| | |||||||||  |||    
T  19143094 ttgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggta----aggctgcgtacagtacaccaaa--tgg 19143001  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||| |  ||||||||||    
T  19143000 tgggaccccttcccggaccatgcgtatgcgggagatttagtgcactggcctgccctttt 19142942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 12575739 - 12575660
Alignment:
Q  80 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||    
T  12575739 tgcgtacaatacaccaaaa-tggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcccttt 12575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 35710294 - 35710447
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||| ||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||  |||||||||||  |    
T  35710294 agttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctgcgttcaatacaccaaa--t 35710386  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||| | ||| |||| ||||||| | |||||||| | |||||||||    
T  35710387 ggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttt 35710447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 13801895 - 13801767
Alignment:
Q  29 gggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgt 127  Q
    |||| |||||||| ||| | | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||||||||||||||| || |    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcat 13801800  T
Q  128 atgagggagctttggtgcaccgagctgcccttt 160  Q
    ||| | ||||||| |||||||| | ||||||||    
T  13801799 atgcgagagctttagtgcaccgggttgcccttt 13801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 7097863 - 7097760
Alignment:
Q  51 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 150  Q
    |||||||||||||||||||||    ||| |||||| |||||||||||  ||||| |||||||||||| |||||||||||| ||||||||| |||||||      
T  7097863 ctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcaccat 7097770  T
Q  151 gctgcccttt 160  Q
    ||||||||||    
T  7097769 gctgcccttt 7097760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 16957386 - 16957451
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  16957386 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 16957451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 25622524 - 25622584
Alignment:
Q  89 tacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccg 25622584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 43574620 - 43574730
Alignment:
Q  34 caagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 132  Q
    |||||||| |||||  ||||||||||| |||||||||||    |||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| |    
T  43574620 caagtcctggaaacaatctcttgtgtagaaaacagggta----aggctgcgtacaatataccaaa--tggtgggaccccttcccggaccctgcgtatgcg 43574713  T
Q  133 ggagctttggtgcaccg 149  Q
    |||||||| | ||||||    
T  43574714 ggagctttagagcaccg 43574730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 29334447 - 29334533
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||| ||||  ||||||| ||||||||||||    
T  29334447 aaggctgcgtacaatacaccagaa-tggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgccctttta 29334533  T

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Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2838759 - 2838899
Alignment:
Q  1 agttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| ||| | |||| |  ||||||  |||||| |  ||||||||||||||||||||    |||||||||| |||||||||||      
T  2838759 agttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa-- 2838852  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    |||||||| |||||| ||||||||||||||| |||||| | ||||||    
T  2838853 tggtgggatcccttctcggaccctgcgtatgcgggagcatcggtgca 2838899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 209081 - 208925
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||| ||| | |||  || |||||||| | |||   |||||||||||||||||||||    ||||||| |  |||||||||||| |    
T  209081 agttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggta----aggctgcattcaatacaccaaaa-t 208987  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||| |||||||| |||||   ||||||| |||||||| || || ||||||    
T  208986 ggtgggaccccttcctggaccctgggtatgcaagagctttagtgcaccgggcggcactttta 208925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 12006401 - 12006329
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| ||||||||| |||||||| | |||||||    
T  12006401 aatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 20135656 - 20135740
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||  |||||||  |||||||| | |||||||    
T  20135656 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 39301104 - 39301247
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||| ||||||| | ||||||| |||||| | | |||   |||||||||| ||||||||||| |||    |||||| ||| |||||||||    
T  39301104 agttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaagga----tgcgtataatgcaccaaaaa 39301199  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
     ||||||||||||||||||||||| |||||| ||||| ||| ||||||||    
T  39301200 -ggtgggaccccttcccggaccctccgtatgtgggag-tttagtgcaccg 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 3771414 - 3771476
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| |||||||| ||||||||||||    
T  3771414 tggtgggaccccttcccggactctgtgtatgtgggagctttagtgcaccgggctgccctttta 3771476  T

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Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 7368413 - 7368520
Alignment:
Q  35 aagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggg 134  Q
    ||||||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||||||   |||||||||||||||||||||||||| |||| |||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtggg 7368505  T
Q  135 agctttggtgcaccg 149  Q
    |||| | ||||||||    
T  7368506 agctctagtgcaccg 7368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 12477204 - 12477119
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||   ||||||| ||||||| | ||||||||||    
T  12477204 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacccaactgccctttt 12477119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 34154897 - 34154814
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| || |||| | |||||||| | ||||||||    
T  34154897 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttt 34154814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 10306546 - 10306494
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  10306546 aatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttt 10306494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 21784396 - 21784335
Alignment:
Q  96 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| |||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22600435 - 22600569
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||| ||||||||||| || |  |||||| |||||||| |||||  | | |||||||||| ||||||||    |||||| ||| |||||||||||      
T  22600435 agttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggta----aggctgtgtacaatacaccaaa-- 22600528  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||| ||||||||||| |||||||||| |||||||||    
T  22600529 tggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 16880730 - 16880658
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||||| |||||||| ||||||||| ||||||||    
T  16880730 aaggctgcgtacaatacaccaaa--tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccg 16880658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22861820 - 22861667
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||| | |||||||||||| | |||||||||||||||       | | ||| ||||  | |||||| |  ||||    
T  22861820 agttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa------caagtaagactgctcacaatacatc--aaat 22861729  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||| || ||||||| |||| ||||||| | |||||||||  ||||||||||    
T  22861728 ggtgggaccccttctcgaaccctgcatatgcgggagctctagtgcaccgaattgccctttta 22861667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37024708 - 37024646
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa 63  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||    
T  37024708 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 1850624 - 1850763
Alignment:
Q  4 tgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggt 103  Q
    ||||||||||||||||||| | ||||||| |||||||  ||||    |||||||||||||||||  ||    ||| |||||| |||||| ||||  ||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaacagaata----agggtgcgtacaatacatcaaa--tggt 1850717  T
Q  104 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||| ||||| |||||||||| ||| || |||||| ||||||||    
T  1850718 gggaccacttcctggaccctgcggatgcggaagctttagtgcaccg 1850763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 19093884 - 19093949
Alignment:
Q  96 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||| |||||||| |||||||||||    
T  19093884 aaaatggtatgacccctacccggaccctgcgtatgttggagctttagtgcaccgggctgccctttt 19093949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 1565412 - 1565566
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | | ||||| |||||||| |||||   |||||| ||||||| |   ||   ||||||||||| ||| |||||||  |    
T  1565412 agttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaaaca-tatt-aaggctgcgtacaatgcaccaaa--t 1565507  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    || |||||||||||||||||||||| |||| |||||| || |||||||| | ||||||||    
T  1565508 ggcgggaccccttcccggaccctgcatatgtgggagc-ttagtgcaccgggttgcccttt 1565566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 16028683 - 16028623
Alignment:
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 16028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 28516588 - 28516432
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| ||| |||||| | ||||||| |||||| | |||||   |||||||||||||| |||| |||||    ||||||| |||||| |||||     
T  28516588 agttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctaggg----ctgcgtacaatacatcaaaa- 28516494  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| ||||| ||||||||| |||  |||||||| ||| |||  | |||||||||    
T  28516493 tggtgggacccattcccagaccctgcgcatgcaggagctttagtggaccaggttgccctttt 28516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 30877623 - 30877564
Alignment:
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  30877623 ggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 30877564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 39801591 - 39801654
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 163  Q
    ||||||||||||||||| |||||| |||||| ||||||||| |||||||| | |||| ||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgccattttag 39801654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 11657783 - 11657698
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| || |||||||||||| |||||||||||||||||| |||||||  | | |||| |||| || ||||| |||||||||||    
T  11657783 aaggctgcatacaatacaccaaaa-tggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgccctttt 11657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 10943900 - 10943844
Alignment:
Q  104 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||| |||||||||||    
T  10943900 gggaccccttcccggaccctgca-atgcgggagctttagtgcaccgggctgccctttt 10943844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 21542530 - 21542489
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagct 138  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  21542530 aaatggtgggaccccttcccggactctgcgtatgcgggagct 21542489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 32354211 - 32354264
Alignment:
Q  109 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||| ||||| ||||||||| |||||||| | ||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttta 32354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 22908014 - 22907913
Alignment:
Q  5 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 104  Q
    ||||| |||||||||||| | || |||| ||||||| |||||| | ||||||||||||||||| ||    |||| ||| || ||||||||  ||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagt----aaggttgcatacaatacacc--aaatggtg 22907921  T
Q  105 ggacccct 112  Q
    ||||||||    
T  22907920 ggacccct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23974761 - 23974824
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 64  Q
    ||||||||||||||||||| || | ||||||| |||||||| |||||   ||||||||||||||    
T  23974761 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 23974824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 4654479 - 4654421
Alignment:
Q  96 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctg 154  Q
    |||||||||||| |||||| || ||||||| |||| ||||||||| ||||||| |||||    
T  4654479 aaaatggtgggatcccttctcgaaccctgcatatgcgggagctttagtgcaccaagctg 4654421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 13774949 - 13774998
Alignment:
Q  109 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    ||||| |||||||||||||||| ||||||||| |||||||| ||| ||||    
T  13774949 ccctttccggaccctgcgtatgcgggagctttagtgcaccgggctaccct 13774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 24903756 - 24903695
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||| ||||||||||||||| |||| || | |||| ||||||||||||| |||| ||||||    
T  24903756 tggtgagaccccttcccggacactgcatacgcgggaactttggtgcaccgggctgtcctttt 24903695  T

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Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 39079823 - 39079755
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 156  Q
    |||||||||||| |||||||||||||||||||||| || ||||  ||||| ||| |||||| | ||||||    
T  39079823 aatacaccaaaa-tggtgggaccccttcccggaccatgtgtatacgggagttttagtgcacagggctgcc 39079755  T

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Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 42924917 - 42924841
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccgg--accctgcgtatgagggagctttggtgcaccg 149  Q
    |||| |||||| ||||||||||||||| ||| | |||||||| |  |||||||||||| || |||||| ||||||||    
T  42924917 aaggttgcgtacaatacaccaaaaatgatggaatcccttcccagacaccctgcgtatgcggaagctttagtgcaccg 42924841  T

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Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 24313645 - 24313570
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccgg-accctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||| |||||||||||||||||||  || || |||||  | |||||| |||||||| ||||||||||||    
T  24313645 aatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgctgtagctttagtgcaccgggctgccctttta 24313570  T

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Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 24355982 - 24355907
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccgg-accctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||| |||||||||||||||||||  || || |||||  | |||||| |||||||| ||||||||||||    
T  24355982 aatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgctgtagctttagtgcaccgggctgccctttta 24355907  T

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Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 30006397 - 30006449
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||||||  |||  ||||| ||||||||| ||||||||    
T  30006397 aaatggtgggaccccttcccggggcctatgtatgcgggagctttagtgcaccg 30006449  T

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Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 13160683 - 13160836
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||||||||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||||    
T  13160683 agttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aaat 13160776  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| ||| | ||||||||    
T  13160777 ggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcccttt 13160836  T

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Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 39461150 - 39460992
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||| |||||||| | ||||||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| |||||||||| ||    
T  39461150 agttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaataa 39461055  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  39461054 tggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 39460992  T

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Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 21070856 - 21070708
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |     || ||||||||||| |||||||||| |||    
T  21070856 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaataat 21070757  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  21070756 ggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 21070708  T

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Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20284227 - 20284080
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |    |||| ||||||||||| |||||||||| ||    
T  20284227 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaa--agggtaaggctgcgtacaatacaccaataa 20284130  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  20284129 tggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 20284080  T

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Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36720777 - 36720933
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||      
T  36720777 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa-- 36720870  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||  | ||||||||||    
T  36720871 tggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgccctttta 36720933  T

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Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 28817780 - 28817625
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||| ||      
T  28817780 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacacccaa-- 28817687  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||| || | |||||||||    
T  28817686 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgccctttt 28817625  T

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Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 35261660 - 35261815
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||| ||| ||||| |||||||||||||||| |||||||    ||| |||||| |||||||||||      
T  35261660 agttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaaa-- 35261753  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||||| | |||||||||    
T  35261754 tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35261815  T

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Target: chr8; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12670402 - 12670261
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  ||||    
T  12670402 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aaat 12670310  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  12670309 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 12670261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 45071246 - 45071398
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||| || || | ||||||| ||||| || ||||| | |||||||||||||||||||||    |||||||||| |||||||||||  |    
T  45071246 agttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--t 45071339  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  45071340 ggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

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Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 7136683 - 7136538
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | || |||| |||||||| |||||   ||||||||||||||| ||||||    |||||||||| |||||||||| ||    
T  7136683 agttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggta----aggctgcgtacaatacaccaataa 7136588  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  7136587 tggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccg 7136538  T

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Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30454249 - 30454096
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| || ||||    ||||||||||  ||||||||||  |    
T  30454249 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaggta----aggctgcgtacgatacaccaaa--t 30454157  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  30454156 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 24365214 - 24365078
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    |||||||||||||||||| ||| | ||||||| |||| ||||||||| | ||||||||||||||  |||||||    |||||||| | |||||||||||     
T  24365214 agttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggta----aggctgcgaacaatacaccaaa- 24365120  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
     ||||||||||||||||||||||||||||||| ||||||||||    
T  24365119 -tggtgggaccccttcccggaccctgcgtatgtgggagctttg 24365078  T

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Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 44781660 - 44781506
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| ||||||||||   ||||||| |||||||| |||||   ||||||||||||| ||||||||    |||||| ||| |||||||||||||    
T  44781660 agttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggta----aggctgtgtacaatacaccaaaaa 44781565  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    || ||||||||| |||| ||||||||||||| ||||||||| |||||| | ||||||||    
T  44781564 tgttgggaccccgtcccagaccctgcgtatgcgggagctttagtgcactgtgctgccct 44781506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6760803 - 6760960
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||| |||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||| |||| |||||||||| ||    
T  6760803 agttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcttcgtacaatacaccaataa 6760898  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||| ||||||| || |||| ||||||||| |||||||| | |||||||||    
T  6760899 tggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 6760960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 18164913 - 18164771
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||||||||||    ||| |||||| |||||||||||       
T  18164913 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaag-- 18164820  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    | || ||||  ||||||||||||||||||| ||||||||| ||||||||    
T  18164819 gatgtgaccatttcccggaccctgcgtatgcgggagctttagtgcaccg 18164771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 17823557 - 17823711
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||| |||| | ||||||| |||||||| ||||| | ||||||||||||||| ||| ||    || |||||||||||||||||||      
T  17823557 agttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggata----agactgcgtaaaatacaccaaa-- 17823650  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||| ||||||||||| ||||||| ||||  |||||||| |||||||| | ||||||||    
T  17823651 tggtggaaccccttcccgaaccctgcatatgcaggagctttagtgcaccgggttgcccttt 17823711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 161
Target Start/End: Original strand, 20869941 - 20870061
Alignment:
Q  38 tcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 136  Q
    |||| ||||| |||||||||||||||| |||||||    |||||||||| |||||||||| |||||||||||||||||| |||||| || |||| |||||    
T  20869941 tcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggag 20870036  T
Q  137 ctttggtgcaccgagctgccctttt 161  Q
    |||| |||||||| | |||||||||    
T  20870037 ctttagtgcaccgggttgccctttt 20870061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26954113 - 26954272
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    |||||||||||||||| |  || | ||||||| |||||||| ||||| | ||||||||||||||  |||||||    |||||||||| |||||||||| |    
T  26954113 agttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggta----aggctgcgtacaatacaccaata 26954208  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||| ||||  || |||| ||||||||| |||||| | | ||||||||||    
T  26954209 atggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgccctttta 26954272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 44530130 - 44530286
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||| ||||||||||||  || | ||||||| |||||| | |||||   |||||||||||||| |||||||    |||||||||| |||||||||||      
T  44530130 agttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa-- 44530223  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||||| | || |||||||    
T  44530224 tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgacctttta 44530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 5135418 - 5135289
Alignment:
Q  26 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 125  Q
    ||||||| |||||||| ||||| | |||||||||||||| || |  || ||||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaa-agag--ggtaaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgc 5135324  T
Q  126 gtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||  |||||||| |||||||| |||||||||||    
T  5135323 gtatgcaggagcttt-gtgcaccgggctgccctttt 5135289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 29521839 - 29521696
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||| |||||||| || | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| |||||||||||      
T  29521839 agttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggta----aggctgcgtacaatacaccaaa-- 29521746  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||| ||| |||| ||||||||||||| ||||||||| ||||||||    
T  29521745 tggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccg 29521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20869650 - 20869523
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||| ||| ||||||||||        
T  20869650 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgtgtacaatacaccaa---- 20869560  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagc 137  Q
    |||| |||||||||||||||||||| |||| ||||||    
T  20869559 ggtgagaccccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2626500 - 2626645
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |     || ||| ||||||| |||||||||||  |    
T  2626500 agttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa--t 2626597  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    | |||||||||||||| |||||||| |||| ||||||||  |||||||    
T  2626598 gatgggaccccttcccagaccctgcatatgcgggagcttcagtgcacc 2626645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25250503 - 25250660
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaa-ggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | |||  || |||||||| ||||| | || |||||||||||     ||||| | ||||||||| |||||||||| ||    
T  25250503 agttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaa----tagggtatggctgcgtacaatacaccaataa 25250598  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||| |||| || |||| ||||| ||| |||||||| | |||||||||    
T  25250599 tggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgccctttt 25250660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 29877146 - 29877227
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||| || |||||||  ||||||||    
T  29877146 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgccct 29877227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 42083851 - 42083699
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    ||||||||| |||||||||| | ||||||| |||||||| ||||| | || |||||||||||  |||   | ||||||||||| | || ||||||| |||    
T  42083851 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggg---gcaaggctgcgtacagtataccaaaa-tgg 42083756  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||||||||| |||||| ||| | ||||||||| |||||  | |||||||||    
T  42083755 tgggaccccttcccgaaccctgtgtacgtgggagctttagtgcattgggctgccctt 42083699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 12625962 - 12626027
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  12625962 aaatggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 12626027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 24245432 - 24245564
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa- 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| |||||| |||||| |||||   |||||||    || || |||| ||| |||||||||     
T  24245432 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacg-tctcttatgtaa---cagggta----agactacgtacaatgcaccaaaaaa 24245523  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    | |||||||||||||| |||||||||||||| |||||||||    
T  24245524 ttgtgggaccccttcctggaccctgcgtatgcgggagcttt 24245564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 17250960 - 17250888
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 147  Q
    ||||| ||||| |||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| ||||||    
T  17250960 aaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaaggagctttagtgcac 17250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 16225075 - 16225145
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||    
T  16225075 ctgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccg 16225145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28407397 - 28407467
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 71  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    
T  28407397 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta 28407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 8897918 - 8897763
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||| | || | |||||||  ||||||| |||||   | ||||||||||||     ||||| |||||| |||| |||||||||||      
T  8897918 agttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa----tagggtaaggctacgtacaatacaccaaa-- 8897825  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||||| |||| |||||||||  ||||||  | |||||||||    
T  8897824 tggtgggaccccttcccggaccctgcatatgcgggagctttactgcacccggttgccctttt 8897763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 16013511 - 16013580
Alignment:
Q  80 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||| ||||||| |||||||||| ||||||||||| |||||||| |||| ||||||||| ||||||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccg 16013580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 40444845 - 40444902
Alignment:
Q  104 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  40444845 gggaccccttgccggaccctgcgtatgttggagctttagtgcaccgagctgccctttt 40444902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 26102589 - 26102653
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  26102589 aaatggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctttt 26102653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 31457155 - 31457309
Alignment:
Q  2 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 101  Q
    |||||||||||||| |||||| | ||||||| ||||||||  ||||   |||||||||||||| |||  |    |||||||||| |||||| ||||  ||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaa----aggctgcgtacaatacatcaaa--tg 31457248  T
Q  102 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    || ||||||||||||  |||||||||||| ||||||| | ||||||||   ||||||||||    
T  31457249 gtaggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccggattgccctttta 31457309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 5689683 - 5689755
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||| |||||||||||  |||||| ||||||||||| ||| |||||||| ||||||||| ||||||||    
T  5689683 aaggctgcgtacaatacaccaaa--tggtggaaccccttcccgaaccatgcgtatgtgggagctttagtgcaccg 5689755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 28407475 - 28407538
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||||| |||||| |||||||||  ||||||| | ||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcccttt 28407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 27507985 - 27508034
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccg 27508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 43942376 - 43942417
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  43942376 aaggctgcgtacaatacaccaaaaatggtgggaccccttccc 43942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 35107374 - 35107310
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||| ||| ||||| || |||||| |||||||| | |||||||||    
T  35107374 aaatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgccctttt 35107310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 8484021 - 8483949
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||| ||||||||||   |||||||||||| |||| ||||||||||||| ||||||||| | ||||||    
T  8484021 aaggctgcgtacaatacaccaat--tggtgggaccccatcccagaccctgcgtatgcgggagctttagggcaccg 8483949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 11748282 - 11748406
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatg 101  Q
    |||||||||||||||||||| | ||||||| |||||| | ||||| | ||||| |||||||| |||||||    || | ||||| |||| || |||||||    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggta----agacagcgtacaatatacaaaaaatg 11748377  T
Q  102 gtgggaccccttcccggaccctgcgtatg 130  Q
    || ||||||||||||| | ||||| ||||    
T  11748378 gtaggaccccttcccgaatcctgcatatg 11748406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 23000365 - 23000260
Alignment:
Q  6 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 105  Q
    ||||||||||||||||| | |||||||  ||||||| ||||| | |||||||||||||||| |||    |||| | | || ||||||||  |||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaacacggt----aaggttccatacaatacacc--aaatggtgg 23000274  T
Q  106 gaccccttcccgga 119  Q
    ||||||||||||||    
T  23000273 gaccccttcccgga 23000260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 27468141 - 27468091
Alignment:
Q  111 cttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 27468091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 44742602 - 44742529
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||| || ||| |||||| || ||||||||    
T  44742602 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcttggaccctacggatgcgggagcattagtgcaccg 44742529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 19729392 - 19729462
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 147  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||||| |||  ||||||| | ||||||    
T  19729392 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatacgggagctctagtgcac 19729462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 26457781 - 26457851
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||| ||||||||||   |||||||||||||  || |||| |||||||||||||||||| ||||||||    
T  26457781 aaggctgcgtacaatacaccaat--tggtgggacccct--cctgaccttgcgtatgagggagctttagtgcaccg 26457851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 18595906 - 18595959
Alignment:
Q  93 ccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||| ||| |||||    
T  18595906 ccaaaaatgataggaccccttcccggaccctgtgtatgcgggagttttagtgca 18595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 389649 - 389769
Alignment:
Q  26 cacgggtccaagtcctagaaacggtctcttgtgt---aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccc 122  Q
    ||||||| |||||||| |||||   |||||||||   ||||||||||||    ||| |||||| |||||||||||  || ||||| ||||| || |||||    
T  389649 cacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggta----aggttgcgtacaatacaccaaa--tgatgggatccctttcctgaccc 389742  T
Q  123 tgcgtatgagggagctttggtgcaccg 149  Q
    |||||||| | ||||||| ||||||||    
T  389743 tgcgtatgcgagagctttagtgcaccg 389769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 36486627 - 36486567
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||||| ||||||||||| ||||||||  |||||||| |||| ||| | |||||||    
T  36486627 atggtgggacctcttcccggaccttgcgtatgcaggagctttagtgccccgggttgccctt 36486567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 30395882 - 30395724
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  30395882 agttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 30395787  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||||    
T  30395786 tggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttta 30395724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18944647 - 18944805
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||| ||| |||| ||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  18944647 agttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaacaa 18944742  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||    
T  18944743 tggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 18944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27201651 - 27201793
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || |||| |||||||| ||||| | ||||||||| | ||||||||||    |||||||||| |||||||||||||    
T  27201651 agttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggta----aggctgcgtacaatacaccaaaaa 27201746  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||    
T  27201747 tggtgggaccccttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 11596523 - 11596651
Alignment:
Q  7 tgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtggg 106  Q
    |||||||||||||||| | ||||||| ||||||||||||||   ||||||||||||||||||||    ||||||||||| ||||||||  ||||||||||    
T  11596523 tgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggt----aaggctgcgtataatacacc--aaatggtggg 11596616  T
Q  107 accccttcccggaccctgcgtatgagggagctttg 141  Q
    ||||||||| |||||||||||||| ||||||||||    
T  11596617 accccttcctggaccctgcgtatgcgggagctttg 11596651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34725250 - 34725096
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||| |||  |    
T  34725250 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacactaaa--t 34725158  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  34725157 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 34725096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 46248107 - 46247952
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    || ||||||| |||||||||||      
T  46248107 agttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaaa-- 46248014  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| |||| | |||||||||    
T  46248013 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgccctttt 46247952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 10668239 - 10668387
Alignment:
Q  11 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacc 109  Q
    |||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| |||||| |||||||||| ||||||||||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgcgtacaatacaccaataatggtgggacc 10668334  T
Q  110 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||| ||||||||||| ||||||||| |||||||| | ||||||||||    
T  10668335 ccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10668387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 38478432 - 38478281
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    |||||||||||||||||||| | ||||||| |||||||||||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  ||||||    
T  38478432 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aaatgg 38478340  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||| |||||||| |||||||||| |||| ||||||| | |||||||| | |||||||||    
T  38478339 tggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38478281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 20004246 - 20004088
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | |||| ||||||||| || ||||    |||||||||| |||||||||| ||    
T  20004246 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggta----aggctgcgtacaatacaccaataa 20004151  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||| ||||| || |||| ||||||||| |||||||| | ||||||||||    
T  20004150 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttta 20004088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 27474285 - 27474440
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||| | ||||| ||||||||||||||||||||| |    | |||||||| |||||||  ||  |    
T  27474285 agttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacagggca----aagctgcgtacaatacactgaa--t 27474378  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||||    
T  27474379 ggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttta 27474440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 35005139 - 35005285
Alignment:
Q  13 gtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 111  Q
    |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| |||||||    ||||||| || |||||||||||||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggta----aggctgcatacaatacaccaaaaatggtgggacccc 35005234  T
Q  112 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||| ||| ||||| |||||||| | ||||||||||    
T  35005235 ttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgccctttta 35005285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 35117922 - 35117765
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||||||| |||||||| ||||  | ||||||||||||| ||||||||    |||||| ||| |||||||||||||    
T  35117922 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggta----aggctgtgtacaatacaccaaaaa 35117827  T
Q  100 tggtgggaccccttcccggaccctgcgt-atgagggagctttggtgcaccgagctgcccttt 160  Q
    || ||||||||||||||||||||||||| |||  |||||||| |||||||| ||| ||||||    
T  35117826 tgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccgggcttcccttt 35117765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32632710 - 32632569
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||||    
T  32632710 agttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aaat 32632617  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    ||||||||||||||||  ||||||| |||| ||||||||  |||||||    
T  32632616 ggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcacc 32632569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 46991808 - 46991951
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||| ||| |||||||| ||      
T  46991808 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccgaa-- 46991901  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  46991902 tggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 46991951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 47214515 - 47214655
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||| | ||||||||||    |||| |||||| ||||||||  ||||    
T  47214515 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgt-ttaaaacagggt----aaggttgcgtacaatacacc--aaat 47214607  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||||||||||| |||||||| |||| ||||||| | |||||||    
T  47214608 ggtgggaccccttcccagaccctgcatatgcgggagctctagtgcacc 47214655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14617042 - 14617198
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa-aacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | |||| || |||||||| ||||| | |||||||||||| ||||    ||| |||| |||||| ||||||||  |||    
T  14617042 agttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataaca----aggtaaggttgcgtacaatacacc--aaa 14617135  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||| ||||||||||||||||| |||| ||||||||| |||||||| | | ||||||||    
T  14617136 tggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggttaccctttta 14617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6925104 - 6925259
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||  | ||||||||||||||     ||||| ||||||||| | |||||||| ||      
T  6925104 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaa----tagggtaaggctgcggacaatacaccgaa-- 6925197  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||| ||||    
T  6925198 tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgccttttt 6925259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18724699 - 18724549
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||| ||||||||||    ||||||| ||| ||||||||  |||    
T  18724699 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aaggctgtgtacaatacacc--aaa 18724606  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    |  ||||||||||||||||||||| | |||| ||||||||| ||||||| ||||||||    
T  18724605 tcttgggaccccttcccggaccctacatatgcgggagcttt-gtgcaccaagctgccc 18724549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 19414443 - 19414597
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||| ||||||||| | ||||||| |||||||||||||  | ||||| ||||||| |||| ||    |||||||||| |||||||||||  |    
T  19414443 agttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa-caggtta----aggctgcgtacaatacaccaaa--t 19414535  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||| ||||||| |||| ||||||| | |||||||| | ||||||||||    
T  19414536 ggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttta 19414597  T

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Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 18742115 - 18741968
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaa 97  Q
    |||||||||||||||||||||| | || |||| ||| || | | |||| |||| |||| ||||||  |||||||    |||||||||| |||||||||||    
T  18742115 agttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggta----aggctgcgtacaatacaccaaa 18742020  T
Q  98 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||| ||||||||||||| | ||||||| ||||||||    
T  18742019 aatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccg 18741968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 4349713 - 4349796
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  4349713 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

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Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9939465 - 9939624
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | |||| || |||||||| |||||   ||||||| ||| ||||| ||||    ||| |||||  |||||||||||||    
T  9939465 agttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggta----aggttgcgtgcaatacaccaaaaa 9939560  T
Q  100 tggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||| ||| ||||||||||||||| ||||||||| |||||||| | | ||||||||    
T  9939561 tggtgggacccccttctcggaccctgcgtatgcgggagctttagtgcaccgggttaccctttta 9939624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 23768474 - 23768334
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||| ||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||      
T  23768474 agttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa-- 23768381  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  23768380 tggtgggacaccttcccagaccctgcgtatgcgggagctttagtgca 23768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 35253329 - 35253198
Alignment:
Q  11 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 110  Q
    ||||||||||||   ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggaccc 35253237  T
Q  111 cttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||| |||| ||||||| | ||||||||    
T  35253236 cttcccggaccctgcatatgcgggagctctagtgcaccg 35253198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 42304292 - 42304218
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42304292 aaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 42304218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 50606488 - 50606562
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  50606488 aatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 50606562  T

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Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 41319960 - 41319802
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||| |||  ||||||| ||||| |||||||||||| ||||||||||    ||||||||||| ||||||||  |||    
T  41319960 agttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc--aaa 41319867  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttagg 164  Q
    || ||||||||||||||| ||||| | |||| ||||| ||  |||||| | | ||||||||||||    
T  41319866 tgatgggaccccttcccgaacccttcatatgcgggagtttcagtgcactgggttgcccttttagg 41319802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 19932838 - 19932783
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 130  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19932838 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 19932783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45402099 - 45402243
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaagg-ctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||| || || |  |||||| |||||||| ||||| | ||||||||||||||||||||    |||  ||||||| |||||||||||      
T  45402099 agttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggttc--aagttctgcgtacaatacaccaaa-- 45402193  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  45402194 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccg 45402243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6983963 - 6983809
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||| | |  |||||||||||| | |    |||||| |||||||||||  |    
T  6983963 agttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcgtata-aaaaacagggtaagta----tgcgtacaatacaccaaa--t 6983871  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||    
T  6983870 ggtgggacccctttccggaccctgcgtaggcaggagctttggtgcaccgggctgccctttta 6983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 2435941 - 2435797
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| ||||| ||||| ||||||    || ||||||| ||||||||||||     
T  2435941 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggta----agcctgcgtacaatacaccaaaa- 2435847  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||||||||| ||| ||||| || ||| ||||||||| ||||||||    
T  2435846 tggtgggacccctttccgtaccctccgcatgcgggagctttagtgcaccg 2435797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 22324925 - 22325049
Alignment:
Q  29 gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgta 128  Q
    |||| |||||| | ||||| | |||||||||||||||||||||    ||||||| || |||||||||||||||||||  |||| ||||| ||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaacagggta----aggctgcatacaatacaccaaaaatggtggagccccgtcccg-accctgcgta 22325019  T
Q  129 tgagggagctttggtgcaccgagctgccct 158  Q
    || ||||||||| |||||||  ||||||||    
T  22325020 tgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 45812689 - 45812548
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| ||||||||  |||| |||||||||||||||  ||||||    ||||||| || |||||||||||  |    
T  45812689 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaag-agggta----aggctgcatacaatacaccaaa--t 45812597  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||  ||||||| |||| ||||||| | ||||||||    
T  45812596 ggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccg 45812548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 19701574 - 19701730
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||| ||||||||||| | |||||||  ||||| |  |||| | ||||||||||||||     | || |||| || ||| |||||||||||| |    
T  19701574 agttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaac---ttggtaaggatgggtacaatacaccaaaa-t 19701669  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||  ||| |||||||    
T  19701670 ggtggggccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctaccctttt 19701730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 31442473 - 31442400
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  31442473 aaggatgcgtacaatacaccaaaa-tggtgggaccccttcccggacactgtgtatgtgggagctttggtgcaccg 31442400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8197047 - 8197202
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| |||||||| | ||  | |||||||||||||| || ||||    ||||| |||| | |||||||||      
T  8197047 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggta----aggctacgtacagtacaccaaa-- 8197140  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||| |||||||||| |||||||||||||||  |||||||| ||| |||| | |||||||||    
T  8197141 tggtaggaccccttctcggaccctgcgtatgttggagctttagtgtaccgggttgccctttt 8197202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12126989 - 12126836
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||| | ||||| | |||||||  |||| || ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||  |    
T  12126989 agttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 12126897  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
     |||||||||||||||||||||||| |||| ||||||| | |||||| | | |||||||||    
T  12126896 tgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgccctttt 12126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 10378818 - 10378738
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    ||||||||||| |||||||||||  |||||||||||||||  ||||||||| |||| ||||||||| |||||||| |||||||    
T  10378818 aaggctgcgtacaatacaccaaa--tggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 15505643 - 15505722
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||    
T  15505643 ctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagcttt-gtgcaccgaactgccttttt 15505722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 31382330 - 31382213
Alignment:
Q  38 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagc 137  Q
    |||| ||||| | |||||||||||||||||| ||    |||||||||| |||||||||||  |||||||||||||||| ||||||||| |||| ||||||    
T  31382330 tcctggaaacagcctcttgtgtaaaaacaggata----aggctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcatatgcgggagc 31382237  T
Q  138 tttggtgcaccgagctgccctttt 161  Q
    |||  || |||| | |||||||||    
T  31382236 tttactgtaccgggttgccctttt 31382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 15511271 - 15511150
Alignment:
Q  35 aagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcg--taaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatga 131  Q
    ||||||| ||||| | |||||||||||||| |||||||    ||||||||  || |||||||||||| |||||| ||||||||| ||||||||||||||     
T  15511271 aagtcctggaaaccgcctcttgtgtaaaaaacagggta----aggctgcggatacaatacaccaaaa-tggtggtaccccttcctggaccctgcgtatgt 15511177  T
Q  132 gggagctttggtgcaccgagctgccct 158  Q
    | ||||||| |||||||| ||||||||    
T  15511176 gtgagctttagtgcaccgggctgccct 15511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17470500 - 17470361
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||  | || |||| |||||||||||||| | |||||||||| ||||||||||    ||||||||||| |||||||| ||||    
T  17470500 agttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc-aaaa 17470406  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    | ||||||||| |||| |   |||||||||| ||||||||| |||||    
T  17470405 tagtgggacccgttcctg--acctgcgtatgtgggagctttagtgca 17470361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20036224 - 20036379
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| |||||   |||||||||||| | |  |  || |||  |||||  ||||||||  ||||    
T  20036224 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaag--ggtaagattgcgttcaatacacc--aaat 20036319  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||| ||||||||||||||||||||||||  |||| ||| |||||||| ||||| |||||    
T  20036320 ggtggaaccccttcccggaccctgcgtatgcaggag-ttttgtgcaccgggctgctctttt 20036379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25468417 - 25468285
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||| ||||| | || |||| |||||||| |||||   |||||||||||||| ||||||    |||| |||||| ||||||||  |||    
T  25468417 agttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggt----aaggttgcgtacaatacacc--aaa 25468324  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagct 138  Q
    |||| ||||| |||||| ||||||||||||| |||||||    
T  25468323 tggttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 20999933 - 20999848
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| |||||||||||  || |||| |||||||| | |||||||||| | ||||||||| |||||||| ||||||||||||    
T  20999933 aaggctgcgtacaatacaccaaa--tgatggggccccttccggcaccctgcgtacgcgggagctttagtgcaccgggctgccctttta 20999848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 22930221 - 22930104
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | || |||| |||||||| ||||| | || |||||||||||||||||    |||| || | | ||||||||  ||||    
T  22930221 agttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggt----aaggttgtg-acaatacacc--aaat 22930129  T
Q  101 ggtgggaccccttcccggaccctgc 125  Q
    ||||||||||||||| |||||||||    
T  22930128 ggtgggaccccttcctggaccctgc 22930104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 30555210 - 30555274
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||| ||||||||||||||| | ||||||| |||||||| |||| ||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcaccgggctgacctttt 30555274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 1517394 - 1517310
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| ||||||||||   ||||||||||||||| | |||||||||||||  |||||||| |||||||| | |||||||||    
T  1517394 aaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 1517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 23796540 - 23796624
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||| |||||| |||||||||||  ||||| ||||||||||| |||||||| ||||  |||||||| |||||||| |||||||||||    
T  23796540 aaggttgcgtacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggctgccctttt 23796624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 43768214 - 43768298
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| || ||||||||||   ||||||||||||||||| ||||||||||||  |||||||||  ||||||| |||||||||||    
T  43768214 aaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctttt 43768298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 25290167 - 25290300
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacg--gtctcttgtgtaaaaa-cagggtaggg-aaggctgcgtaaaatacaccaa 96  Q
    |||||||||||||||||||||| | |||| || |||||| | |||||   | |||||||||||||| ||||||| || |||| || ||| ||||||||||    
T  25290167 agttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggcaaggttgtgtacaatacaccaa 25290266  T
Q  97 aaatggtgggaccccttcccggaccctgcgtatg 130  Q
    ||||| | |||||||||||| ||| |||| ||||    
T  25290267 aaatgataggaccccttcccagactctgcatatg 25290300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 33594191 - 33594129
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||| | ||| ||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccctttta 33594129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 50811943 - 50812099
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaa 98  Q
    ||||||||||| |||||||||| | |||||   || ||||| ||||| |  |||||||||||||  |||||||    ||| |||||| ||||||||||||    
T  50811943 agttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggta----aggttgcgtacaatacaccaaaa 50812038  T
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
     |||||| |||||||||||  ||||||||||| |||||||||  ||||| | |||||||||||    
T  50812039 -tggtgg-accccttcccgcgccctgcgtatgcgggagctttaatgcactgggctgccctttt 50812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33222988 - 33223093
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||| |  ||||| | ||||| | |||||||||||||||||    || |||| |||||| |||||||| |||||    
T  33222988 agttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacag----ggaaaggttgcgtacaatacacc-aaaat 33223082  T
Q  101 ggtgggacccc 111  Q
    |||||||||||    
T  33223083 ggtgggacccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 44485263 - 44485128
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||| ||||| | |||||||   |||||| |||||   | ||||||||||| ||| ||||    |||||||||| |||||||||||      
T  44485263 agttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggta----aggctgcgtacaatacaccaaa-- 44485170  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    |||| ||||||||||||||| ||| |||||| ||||||||||    
T  44485169 tggttggaccccttcccggatcctacgtatgcgggagctttg 44485128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 4587626 - 4587574
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||||||||||||||| |||| ||||||||  ||||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccg 4587574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 30682907 - 30682951
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  30682907 aaatggtgggaccccttcccggaccgtgcgtatgcgggagctttg 30682951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 19974158 - 19974072
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||| |||||| |||||||||||| || |||||||| ||||||||| ||  ||||| ||||||||| |||||| | ||||||||||||    
T  19974158 aaggttgcgtacaatacaccaaaa-tgatgggacccattcccggactctatgtatgcgggagctttagtgcacggggctgccctttta 19974072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22327103 - 22327255
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | | ||||| |||||||| |||||   ||||||||| |||||||||||    ||||||| |||  || |||| ||||    
T  22327103 agttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggt----aaggctgtgtacgatgcacc-aaaa 22327197  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||     |||||| || ||| ||||| |||||||||||||||||| |||||| ||||    
T  22327198 tggtggg----gttcccgaactctgtgtatgcgggagctttggtgcaccgggctgccttttt 22327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 39215042 - 39214961
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    ||||||||||| ||||  |||||| ||||||| |||||||||  |||||||||||| || |||||| |||||||| |||||||    
T  39215042 aaggctgcgtacaatattccaaaa-tggtgggtccccttcccaaaccctgcgtatgtggaagctttagtgcaccgggctgccc 39214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 45264471 - 45264411
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    |||||||||||| ||||||||||||||| | |||||||| |||| ||||||||| |||||||    
T  45264471 aatacaccaaaa-tggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 6358199 - 6358250
Alignment:
Q  78 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 130  Q
    |||||||| || ||||||||| ||||||||||||||||| |||||||||||||    
T  6358199 gctgcgtacaaaacaccaaaa-tggtgggaccccttcccagaccctgcgtatg 6358250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 35019305 - 35019388
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| || ||||||||||   ||||||||||||| ||| ||||||||||||| | ||||||| |||||||| |||||| ||||    
T  35019305 aaggctgcatacaatacaccaat--tggtgggacccct-cccagaccctgcgtatgcgagagctttagtgcaccgggctgccatttt 35019388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 25554796 - 25554742
Alignment:
Q  106 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||||||| |||||||||||| |||||| || ||||||||  |||||||||    
T  25554796 gaccccttcccgaaccctgcgtatgcgggagcattagtgcaccggactgcccttt 25554742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 3060031 - 3060003
Alignment:
Q  102 gtgggaccccttcccggaccctgcgtatg 130  Q
    |||||||||||||||||||||||||||||    
T  3060031 gtgggaccccttcccggaccctgcgtatg 3060003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 16120819 - 16120875
Alignment:
Q  105 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||| |||||| |||| |||||||||  ||||||  |||||||||||    
T  16120819 ggaccccttcccggcccctgcatatgcgggagctttaatgcaccaggctgccctttt 16120875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40424746 - 40424786
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcct 41  Q
    |||||||||||||||||||||| | ||||||| ||||||||    
T  40424746 agttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 50760287 - 50760239
Alignment:
Q  113 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||| |||||||||||| |||||||||  ||||||| |||||||||||    
T  50760287 tcccgaaccctgcgtatgcgggagctttaatgcaccgggctgccctttt 50760239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 9e-36; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5648240 - 5648394
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||||    
T  5648240 agttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aaat 5648333  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||| | | |||||||||    
T  5648334 ggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgccctttt 5648394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6430779 - 6430627
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||| | ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||||    
T  6430779 agttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aaat 6430686  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    ||||||||| |||||||||||||||||||| ||||||||| | |||||| | |||||||    
T  6430685 ggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16911543 - 16911701
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||| ||| | ||||||| |||||||||||||| | |||||||||| ||| |||||||    |||||||||| |||||||||| ||    
T  16911543 agttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggta----aggctgcgtacaatacaccaataa 16911638  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||  |||| | ||||||||||    
T  16911639 tggtgggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgccctttta 16911701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 54175044 - 54175201
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaa-cggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||| | |||||||| |||| | | |||||||||||||||||||||    |||||||||| ||||||||||||     
T  54175044 agttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaaa- 54175138  T
Q  100 tggtgggaccccttccc-ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||| ||||||||| |||| ||||||||| |||||||| |||||||||||    
T  54175139 tggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgccctttt 54175201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44363286 - 44363130
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | |||| || ||||||||  |||| | ||| |||||||||| ||||||||||    ||||||| ||  |||||||||    
T  44363286 agttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtaggg----ctgcgtacaacgcaccaaaaa 44363191  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  44363190 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 44363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16408757 - 16408600
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    || ||||||| |||||||||| ||    
T  16408757 agttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaataa 16408662  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||| |||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  16408661 tggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 16408600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 30639361 - 30639515
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||| ||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||||    
T  30639361 agttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aaat 30639454  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||| |||||||||||||||||||| |||| ||||||||| |||||| | | |||||||||    
T  30639455 ggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttt 30639515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 54730230 - 54730377
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||  ||| | ||||||| |||||||||||||| | |||||||||||||| |   ||||  ||||||||||| |||||||||| ||    
T  54730230 agttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaa---taggataaggctgcgtataatacaccaataa 54730326  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 150  Q
    || ||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  54730327 tgatggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccga 54730377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30352745 - 30352579
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa------cagggtagggaaggctgcgtaaaatacacc 94  Q
    ||||||||||| ||||| |||| | |||||||   |||||| ||||| | ||||||||||||||      ||||||| | || |||||||| ||||||||    
T  30352745 agttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaaaaaaacagggtaagtaaagctgcgtacaatacacc 30352646  T
Q  95 aaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| | |||||||||    
T  30352645 aaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttt 30352579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40915810 - 40915952
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||||  || | ||||||| |||||||| ||||| | |||||||||||||||| ||||    |||||||||| |||||||||||  |    
T  40915810 agttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacaaggta----aggctgcgtacaatacaccaaa--t 40915903  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  40915904 ggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccg 40915952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 47528682 - 47528529
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |    
T  47528682 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 47528590  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||  |||| ||||||| | |||||||| | |||||||||    
T  47528589 ggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttt 47528529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 48598977 - 48598824
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  ||||    
T  48598977 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aaat 48598885  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||| ||| ||||  |||||| | |||||||| | |||||||||    
T  48598884 ggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgccctttt 48598824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 20224965 - 20225117
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | || |||| |||||||| |||||   ||||||||||||| |||||||    |||||||||| |||||||||||  |    
T  20224965 agttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--t 20225057  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  20225058 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 47482918 - 47482848
Alignment:
Q  92 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgccctttta 47482848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 5306817 - 5306694
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||| |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||||||    |||| |||||| ||||||||  ||||    
T  5306817 agttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggt----aaggttgcgtacaatacacc--aaat 5306724  T
Q  101 ggtgggaccccttcccggaccctgcgtatg 130  Q
    ||||||||||||||||||||||||||||||    
T  5306723 ggtgggaccccttcccggaccctgcgtatg 5306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23501774 - 23501925
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | ||||||| ||||||      || | |||||||||||||| |||||||    ||| |||||| |||||||||| ||    
T  23501774 agttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaataa 23501863  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  23501864 tggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 23501925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11054300 - 11054147
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| ||||||||  |||| ||||||||||| ||||||||||    ||| ||||||| ||||||||  ||||    
T  11054300 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt-aaaacagggt----aagactgcgtacaatacacc--aaat 11054208  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    || || ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  11054207 ggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 11054147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 20639777 - 20639657
Alignment:
Q  37 gtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 135  Q
    ||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcggga 20639683  T
Q  136 gctttggtgcaccgagctgccctttt 161  Q
    ||||| |||||||| | |||||||||    
T  20639682 gctttagtgcaccgggttgccctttt 20639657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 21646945 - 21647090
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||| ||| |||||||| ||||| | ||||||||||||||     ||||| ||||||||||| |||| ||||| ||    
T  21646945 agttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaa----tagggtaaggctgcgtacaatataccaataa 21647040  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||||||||| ||||| || |||| ||||||||| ||||||||    
T  21647041 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 21647090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 29208039 - 29207900
Alignment:
Q  12 tgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 111  Q
    ||||||||||| | ||||||| |||||||| ||||  | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||||||    
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggacccc 29207947  T
Q  112 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 158  Q
    |||||||||||||| |||| ||||||| | |||||||| | ||||||    
T  29207946 ttcccggaccctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 20225126 - 20225211
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||||    
T  20225126 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 35567151 - 35567306
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||| ||||||| | || |||| |||||| | ||||| | | |||||||||||| |||||||    |||||| ||| || ||||||||      
T  35567151 agttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggta----aggctgtgtacaacacaccaaa-- 35567244  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||| ||||||||| || ||||||||| |||||||| |||||||||||    
T  35567245 tggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgccctttt 35567306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 17043548 - 17043414
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||||||||||| ||||||||  |||    
T  17043548 agttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggt----aaggctgcgtacaatacacc--aaa 17043455  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||||||||| |||||||| ||||  ||||||||    
T  17043454 tggtgggaccccttcccagaccctgcatatgctggagcttt 17043414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 9832463 - 9832312
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    ||||||| || ||||||||| | ||||||| ||||||||  |||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||    
T  9832463 ttgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tgg 9832371  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||| ||||  ||| || | |||||||| | |||||||||    
T  9832370 tgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgccctttt 9832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 20908720 - 20908635
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||   |||||||||||    
T  20908720 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctttt 20908635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 33836560 - 33836486
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| || | |||||||||    
T  33836560 aatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctttt 33836486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 19027829 - 19027972
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||||||| |||||||| |||||    ||||||||||||| |||||||    |||||||||| ||||||||||       
T  19027829 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat-- 19027922  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||||||||||||| || ||| ||||||||| ||||||||| ||||||||    
T  19027923 tggtgggacccctttccagactctgcgtatgtgggagctttagtgcaccg 19027972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 23580362 - 23580207
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||||||| ||||| |||||||  | |||||||||| |||||||    |||||| |||||||  ||||||| ||||    
T  23580362 agttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacag----gggaagactgcgtaggatacacc-aaaa 23580268  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||| | |||||||||  ||| |||| ||||| ||||||||| ||||||||||||||||||||    
T  23580267 tggcgagaccccttcttgga-cctgtgtatgtgggagctttagtgcaccgagctgccctttt 23580207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 51865121 - 51865036
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| |||||||||  |||||||  |||||||||||    
T  51865121 aaggctgcgtacaatacaccaaa--tggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggactgccctttta 51865036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 7909397 - 7909281
Alignment:
Q  38 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg-agggag 136  Q
    |||| ||||| |||||||||||||||||||||||    ||| |||||| |||||||||||  |||||||||||||||||| ||||||||||||  |||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcggggag 7909304  T
Q  137 ctttggtgcaccgagctgccctt 159  Q
    |||| ||||| || | |||||||    
T  7909303 ctttagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 25463108 - 25463238
Alignment:
Q  6 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 105  Q
    ||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||   || |   |||| |||||| || ||||||||  ||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactggga---aaggttgcgtacaacacaccaaa--tggtgg 25463202  T
Q  106 gaccccttcccggaccctgcgtatgagggagctttg 141  Q
    |||||||||||||||||||| |||| ||||||||||    
T  25463203 gaccccttcccggaccctgcatatgcgggagctttg 25463238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 30690259 - 30690176
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||| || ||||||||||   ||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  30690259 aaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgcccttt 30690176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 38755970 - 38755908
Alignment:
Q  98 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47441684 - 47441541
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||||| | ||| ||| ||||||| |||||| ||||||| |||||||| ||||||    ||||||| ||| ||||||||  |||    
T  47441684 agttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggt----aaggctgtgtacaatacacc--aaa 47441591  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||| |||||||||||||||||||| ||| |  |||||||| || |||||    
T  47441590 tggttggaccccttcccggaccctgagtaagcaggagctttcgtccaccg 47441541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 25343168 - 25343321
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||| |||||||| | | ||| ||| ||||| || ||||  |||||||||||||||| |||||||    |||||||||| |||||||||||||    
T  25343168 agttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaaaa 25343263  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
     ||| |||||||||||  || |||||||||| | ||||||| | |||||  |||||||    
T  25343264 gggttggaccccttcctagatcctgcgtatgtgagagctttagagcacccggctgccc 25343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 47443963 - 47444093
Alignment:
Q  26 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 124  Q
    ||||||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  47443963 cacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 47444056  T
Q  125 cgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    | ||||  |||||||  |||||| | | |||||||||    
T  47444057 catatgcaggagcttcagtgcactgggttgccctttt 47444093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 11394924 - 11394987
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | ||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11394987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 11404651 - 11404714
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | ||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13256551 - 13256398
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||  ||| |||||||| ||    | |||||||||||||| |||||||    |||||||||| |||||||||| ||    
T  13256551 agttgttgtcatgtgactggaaggtcataggttcaagtcctgga----gcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataa 13256460  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    | |||||||||||||||| |||| || | || ||||||||| |||||||| | |||||||||    
T  13256459 tagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgccctttt 13256398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 25629101 - 25629185
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||| | |||| ||||||||| |||||||| | |||||||||    
T  25629101 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgccctttt 25629185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 32484307 - 32484369
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 32484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 14983906 - 14983971
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||  | ||||||||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccatgttgccctttta 14983971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 30496474 - 30496332
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||| |||||||||| | |||| || |||||| | ||||| | |||||||||||| || |||||    ||||||| || |||||||||||  |    
T  30496474 agttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaacac-gggta----aggctgcatacaatacaccaaa--t 30496382  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 150  Q
    || ||||| |||||||||||| ||| ||||| |||||||| |||||||||    
T  30496381 ggggggactccttcccggaccgtgcttatgatggagctttagtgcaccga 30496332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 40553998 - 40553937
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 40553937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 49796849 - 49796911
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctt 139  Q
    ||||||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||    
T  49796849 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 49938744 - 49938613
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||| ||||| |       | ||| |||||||| |||||    
T  49938744 agttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaag-------gtgtacaatacacc-aaaat 49938653  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||||||||  ||||||| |||| |||||||||    
T  49938652 ggtgggaccccttcccataccctgcatatgcgggagcttt 49938613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 21489143 - 21489210
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 147  Q
    ||||||| ||| |||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  21489143 ctgcgtacaatgcaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcac 21489210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32478939 - 32478810
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    ||||||||||||||||| || | | ||| ||| |||||||| |||||   |||| ||||||||||||||||    ||||||     |||||||||||  |    
T  32478939 agttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggta----aggctg-----aatacaccaaa--t 32478851  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  32478850 ggtgggaccccttcccggacccagcgtatgcgggagctttg 32478810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 36816466 - 36816383
Alignment:
Q  77 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||| ||||||||||||| |||||||| |||||| |||||||| ||||| ||||||||| ||| |||| | |||||||||    
T  36816466 ggctgcgtacaatacaccaaaaa-ggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttt 36816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 38786681 - 38786745
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38786745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39077948 - 39077807
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||| ||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    |||| |||||| |||| |||  ||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggttgcgtacaatatacc--aaat 39077856  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    |||| |||  ||| ||||||||||| |||| ||||||| | ||||||||    
T  39077855 ggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccg 39077807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 41018945 - 41018807
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 102  Q
    ||||||||| |||||||||| | ||||||| |||||||| |||||   |||||||||||||  |||||    |||||| |||| ||||||||  |||| |    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggt----aaggctacgtacaatacacc--aaatag 41018852  T
Q  103 tgggaccccttcccggaccctgcgtatgagggagctttggtgcac 147  Q
    |||||||||||||| |||| ||||||||  || ||||| ||||||    
T  41018851 tgggaccccttcccagaccttgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 50555718 - 50555655
Alignment:
Q  98 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| ||||||||||||||||||||||||  |||| ||| |||||||| |||||||||||    
T  50555718 aatggtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgccctttt 50555655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 20405144 - 20405210
Alignment:
Q  80 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    |||||| ||||||| || ||||||||||||||||||||||||| || |||| ||||||||| |||||    
T  20405144 tgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgca 20405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 25388249 - 25388311
Alignment:
Q  98 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||||||||||||||||||||||||||||   ||||||| |||||||| | ||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttt 25388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 36589815 - 36589876
Alignment:
Q  96 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    |||||||||||||||||||| | |||||  ||||| |||||||||||||||||| |||||||    
T  36589815 aaaatggtgggaccccttcctgaaccctatgtatgcgggagctttggtgcaccgggctgccc 36589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 42164300 - 42164232
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 71  Q
    |||||||||||||||||||| | ||||||| |||||| | |||||   |||||||||||||||||||||    
T  42164300 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacagggta 42164232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 7385628 - 7385499
Alignment:
Q  3 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 101  Q
    |||||||||||||||||||| | ||||||| |||| ||| ||||| | ||| ||||| ||||| |||||    |||| || ||  ||||||||  |||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggt----aaggttgtgtgcaatacacc--aaatg 7385535  T
Q  102 gtgggaccccttcccggaccctgcgtatgagggagc 137  Q
    ||||||||| ||||||||||||| ||||| ||||||    
T  7385534 gtgggaccctttcccggaccctgtgtatgcgggagc 7385499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14590818 - 14590881
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 64  Q
    |||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  14590818 agttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 14590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 16494272 - 16494343
Alignment:
Q  78 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||| ||||| || |||||| ||| ||||    
T  16494272 gctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtgtaccg 16494343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 35532077 - 35532128
Alignment:
Q  110 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17315452 - 17315382
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 71  Q
    |||||||||||||||||||||| | ||||||| ||| |||| |||||   |||||||||||||||| ||||    
T  17315452 agttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaacaaggta 17315382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 32629418 - 32629293
Alignment:
Q  5 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 104  Q
    |||||||||||||||||| | ||||||| ||| |||| ||||| | |||||||  |||||||||||    ||||| || | | ||||||| ||| ||| |    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgtaaaaaaacagggt----aaggccgcct-acatacacc-aaattggcg 32629325  T
Q  105 ggaccccttcccggaccctgcgtatgagggag 136  Q
    ||||||||||||||||| |||||||| |||||    
T  32629324 ggaccccttcccggaccttgcgtatgtgggag 32629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 37494832 - 37494972
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||| |||| |||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    ||| ||| || |||| ||||||      
T  37494832 agttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggttgcatacaatataccaaa-- 37494925  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    |||||||||||||| | ||||||||||||||  |||||||| |||||    
T  37494926 tggtgggacccctttcgggaccctgcgtatgcaggagctttagtgca 37494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 19027986 - 19028047
Alignment:
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||| |||||||||||||  | |||| ||||||||| |||||||| |||||||||||    
T  19027986 tggtgggactccttcccggaccccacttatgcgggagctttagtgcaccgggctgccctttt 19028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 30581537 - 30581485
Alignment:
Q  87 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||||| |||||||||||||||||||||||||| ||||  ||||||||    
T  30581537 aatacaccaaaa-tggtgggaccccttcccggaccctgcatatgtaggagcttt 30581485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 44718641 - 44718682
Alignment:
Q  99 atggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagcttt 44718682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 28494223 - 28494287
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||||||| || ||||| |||| ||||||| | |||||||| |||||| ||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgccttttt 28494287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 54967092 - 54967151
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 157  Q
    ||||||||||||||||||||| ||||| | |||| ||||||||| |||||||| |||||||    
T  54967092 aaatggtgggaccccttcccgtaccctacatatgcgggagcttt-gtgcaccgggctgccc 54967151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 55766620 - 55766466
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacac-gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||| | || | ||| |||| |||||  | ||||| || ||||||||  |||||||||    ||||||||||| |||||||    ||    
T  55766620 agttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgtgtaaacagggt----aaggctgcgtacaatacac--tgaa 55766527  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||| ||||| ||||||||| |||||||| | ||||||| |||||||| | ||||||||    
T  55766526 tggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccgggatgcccttt 55766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 3580990 - 3580859
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | |||| || |||||| | |||||   ||||||||||||||| | ||||    |||||| ||  |||||||||||      
T  3580990 agttgttgtcatgtgactgaaaagtcacgagttcaagtc-tggaaac---ctcttgtgtaaaaaccatggta----aggctgtgtgcaatacaccaaa-- 3580901  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    || | ||||||||||||||||||||| |||| ||||||||||    
T  3580900 tgctaggaccccttcccggaccctgcatatgtgggagctttg 3580859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 8473705 - 8473621
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggacccctt-cccgga-ccctgcgtatgagggagctttggtgcaccgagctgccctt 159  Q
    |||||||| || |||||||||||  |||||||||||||| |||||| |||||| |||| ||||||||| |||||||| | |||||||    
T  8473705 aaggctgcatacaatacaccaaa--tggtgggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 9987917 - 9987833
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||| || |||||||||||  ||||||||||||||||  |||| ||| |||| |||||||||  ||||||| |||||| ||||    
T  9987917 aaggctgcatacaatacaccaaa--tggtgggaccccttccttgaccttgcatatgcgggagctttaatgcaccgggctgccttttt 9987833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 39029215 - 39029080
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||| ||||||| ||| | ||  ||| |||| | | ||||| | |||||||||||||| |||||||    |||||| ||| ||||||| ||||     
T  39029215 agttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacacgaaaa- 39029121  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    |||||||||| ||| ||||||||||| |||| |||||||||    
T  39029120 tggtgggaccactttccggaccctgcatatgcgggagcttt 39029080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 7038041 - 7038189
Alignment:
Q  8 gtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaatggtggg 106  Q
    ||||||||||||||| | ||| ||| |||||||| ||||| |  |||||||||||||     ||||| ||| || |||| |||||||||||| |||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcct-gaaacagcttcttgtgtaaaaaa----tagggtaagacttcgtacaatacaccaaaa-tggtggg 7038134  T
Q  107 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
     | ||| |||||||||||||||| | |||||||| |||||| | | ||||||||||    
T  7038135 gcacctacccggaccctgcgtat-acggagctttagtgcactgggttgccctttta 7038189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 2813181 - 2813242
Alignment:
Q  79 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||| |||||| ||| ||||||||||||| |||||| ||  |||||||| |||||||||    
T  2813181 ctgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggagcttt 2813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 35894540 - 35894492
Alignment:
Q  80 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 129  Q
    |||||| |||||||||||| |||||||||||||||||||| | |||||||    
T  35894540 tgcgtacaatacaccaaaa-tggtgggaccccttcccggatcatgcgtat 35894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 8820581 - 8820613
Alignment:
Q  98 aatggtgggaccccttcccggaccctgcgtatg 130  Q
    ||||||||||||||||||| |||||||||||||    
T  8820581 aatggtgggaccccttcccagaccctgcgtatg 8820613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 30560 - 30713
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| ||||||||||    ||||||| |||||||||||  |    
T  30560 agttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa-cagggtaggg----ctgcgtacaatacaccaaa--t 30652  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  30653 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 58963 - 59114
Alignment:
Q  6 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtg 104  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    || ||||||| ||||||||||||||||||    
T  58963 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----agactgcgtacaatacaccaaaaatggtg 59058  T
Q  105 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    |||||||||||| ||| ||||||||| ||||||||| ||||| || | ||||||||    
T  59059 ggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcccttt 59114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13177 - 13023
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| ||||||||| ||||    |||||||||| |||||||| ||  |    
T  13177 agttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggta----aggctgcgtacaatacaccgaa--t 13084  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    |||||||||||||||| ||||||||||||| ||| ||||| |||||||| | |||||||||    
T  13083 ggtgggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgccctttt 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 46812 - 46967
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||  || | ||||||| ||||| || |||||   ||||||||||||||     ||||| |||| |||||| |||||||||||      
T  46812 agttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaa----tagggtaaggttgcgtacaatacaccaaa-- 46905  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 161  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  46906 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 46967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24921 - 24786
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    |||||||||||||||||||||| | || |||| ||||||     ||| | |||||||||||||| |||||||    |||||||||| || ||||||||      
T  24921 agttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggta----aggctgcgtacaacacaccaaa-- 24833  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 146  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||    
T  24832 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 43709 - 43795
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| ||||||||  ||||||||||||||| ||| |||||||||| |||| ||||||| | |||||| ||| ||||||||||    
T  43709 aaggctgcgtacaatacacc--aaatggtgggacccctttctcggaccctgcatatgcgggagctctagtgcactgagttgccctttta 43795  T

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Target: scaffold0057; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 46771 - 46727
Alignment:
Q  96 aaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 140  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  46771 aaaatggtgggaccccttcccagaccctgcgtatgcgggagcttt 46727  T

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Target: scaffold0311 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10791 - 10932
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 99  Q
    ||||||||||||||||||| || | ||||||| ||||  ||  ||||   |||||||||||||| ||||||||||    ||||||  |||||||||||      
T  10791 agttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtaggg----ctgcgtccaatacaccaaa-- 10884  T
Q  100 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 147  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  10885 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

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Target: scaffold0187 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 10202 - 10080
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| ||||||||||| |     
T  10202 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaata- 10109  T
Q  101 ggtgggaccccttcccggaccctgcgtatg 130  Q
     |||||||||||||||||||||||| ||||    
T  10108 -gtgggaccccttcccggaccctgcatatg 10080  T

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Target: scaffold0187; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 20530 - 20408
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| ||||||||||| |     
T  20530 agttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaata- 20437  T
Q  101 ggtgggaccccttcccggaccctgcgtatg 130  Q
     |||||||||||||||||||||||| ||||    
T  20436 -gtgggaccccttcccggaccctgcatatg 20408  T

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Target: scaffold0015 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 48717 - 48632
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 162  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  48717 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 48632  T

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Target: scaffold1176 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 1739 - 1599
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 100  Q
    |||||||||||||||||||||| | || |||| ||||||||  ||||   ||||||||||||| |||| ||    ||||||| || |||||||||||  |    
T  1739 agttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa-caggata----aggctgcatacaatacaccaaa--t 1647  T
Q  101 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    | |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  1646 gatgggaccccttcccggacccggcgtatgcgggagctttagtgcacc 1599  T

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Target: scaffold0254 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4138 - 4258
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa-aa 98  Q
    ||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| |    |||| |||||| |||||||||| ||    
T  4138 agttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggat----aaggttgcgtacaatacaccaataa 4233  T
Q  99 atggtgggaccccttcccggaccct 123  Q
     ||||||||||||||||||||||||    
T  4234 ttggtgggaccccttcccggaccct 4258  T

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Target: scaffold0180 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 24216 - 24144
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 149  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  24216 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 24144  T

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Target: scaffold0223 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 11122 - 11252
Alignment:
Q  11 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 110  Q
    |||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||  |||    ||||||| || |||||||||||  ||||||||| |    
T  11122 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaagta----aggctgcttacaatacaccaaa--tggtgggacac 11214  T
Q  111 cttcccggaccctgcgtatgagggagctttggtgcacc 148  Q
    ||||||||||||||| |||| ||||||| | |||||||    
T  11215 cttcccggaccctgcatatgcgggagctctagtgcacc 11252  T

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Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 72997 - 72879
Alignment:
Q  26 cacgggtccaagtcctagaaacg-gtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccct 123  Q
    ||||||| ||||||||||||||  |||||||||||||||| || ||||    ||||||| || |||||||||||  |||| | ||||||||||||| |||    
T  72997 cacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggta----aggctgcctacaatacaccaaa--tggtagtaccccttcccggaacct 72904  T
Q  124 gcgtatgagggagctttggtgcacc 148  Q
    ||||||| ||||||||| |||||||    
T  72903 gcgtatgcgggagctttagtgcacc 72879  T

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Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 3596 - 3679
Alignment:
Q  75 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 160  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | ||||||    
T  3596 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttt 3679  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 226560 - 226497
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 64  Q
    |||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  226560 agttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 226497  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 35167 - 35048
Alignment:
Q  6 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctctt--gtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggt 103  Q
    |||||||||||||| || | ||||||| ||||||||  |||| |||||||  |||| ||||||||||    ||||||||||| ||||||||  |||||||    
T  35167 ttgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggt----aaggctgcgtacaatacacc--aaatggt 35074  T
Q  104 gggaccccttcccggaccctgcgtat 129  Q
    ||||||| |||| ||| | |||||||    
T  35073 gggaccctttcctggatcttgcgtat 35048  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43110 - 43176
Alignment:
Q  1 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacag 67  Q
    |||| ||||||||||| ||||| | |||| || || ||||||||||| | |||||||||||||||||    
T  43110 agttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaacag 43176  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 23671 - 23715
Alignment:
Q  97 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 141  Q
    |||||||||||||||||||| |||| || ||||| ||||||||||    
T  23671 aaatggtgggaccccttcccagaccttgagtatgtgggagctttg 23715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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